F349970

General Info

Members Datasets Scaffolds Average Seq Length
237 140 474 221

Family's Representative Sequence

Representative Sequence 3300009148|Ga0105243_10053581|Ga0105243_100535812
Length 250
Sequence MSGPLVTRRNALKALGATAGAATILPWLSDEGLAAFADVQKAGAAPVLRVLTPAQYVTVERLVEAIIPTDERSPGARDARVADYMDLLLAEADEGLRKDWLAGLAALDAESTKRFGRGFAKLEAAQTDALLTDISAYETRKVVADAALDVPRNEQPKPQPPQVDTLLGDIGRHKGSRKSQLETFFANTKQATIHGYYTSEIGIHKELRYKGNQMLPEFVGCQTEDGKDCPYCGQKARPAGAATSAQANQR

Samples

Sample ID Description Type Environment
1 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
35 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
36 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
37 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
38 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
39 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
40 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
41 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
63 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
92 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
93 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
97 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
98 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
99 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
100 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
101 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
102 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
103 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
104 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
105 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
111 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
112 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
113 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
114 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
115 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
116 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
118 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
119 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
120 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
121 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
122 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
123 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
124 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
125 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
126 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
127 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
128 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
129 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
130 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
131 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
132 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
133 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
134 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
135 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
136 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
137 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
138 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
139 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
140 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.88
Nodule 0
Rhizoplane 0.42
Rhizosphere 82.28
Stem 0
Stem Tuber 0
Unclassified 17.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105243_10053581 3300009148 Unclassified 3200
2 Ga0070676_10009665 3300005328 Bacteria 5215
3 Ga0070676_10032454 3300005328 Unclassified 2992
4 Ga0070676_10087409 3300005328 Bacteria 1903
5 Ga0070676_10099100 3300005328 Unclassified 1798
6 Ga0068869_100014759 3300005334 Bacteria 5225
7 Ga0068869_100509655 3300005334 Bacteria 1006
8 Ga0070689_100043008 3300005340 Unclassified 3470
9 Ga0070691_10073446 3300005341 Bacteria 1663
10 Ga0070687_100003400 3300005343 Bacteria 6181
11 Ga0070669_100098944 3300005353 Unclassified 2198
12 Ga0070674_100040517 3300005356 Unclassified 3152
13 Ga0070688_100087480 3300005365 Bacteria 2029
14 Ga0070700_100076837 3300005441 Unclassified 2145
15 Ga0070694_100018279 3300005444 Bacteria 4448
16 Ga0070694_100247656 3300005444 Unclassified 1347
17 Ga0070708_100339220 3300005445 Bacteria 1416
18 Ga0070708_100544660 3300005445 Bacteria 1095
19 Ga0070663_100072403 3300005455 Unclassified 2511
20 Ga0070678_100319353 3300005456 Bacteria 1326
21 Ga0070662_100415796 3300005457 Bacteria 1112
22 Ga0068867_100003303 3300005459 Bacteria 11360
23 Ga0070685_10030931 3300005466 Unclassified 2987
24 Ga0070706_100004521 3300005467 Bacteria 13391
25 Ga0070706_100033416 3300005467 Bacteria 4747
26 Ga0070706_100063808 3300005467 Bacteria 3404
27 Ga0070706_100071166 3300005467 Bacteria 3216
28 Ga0070707_100002375 3300005468 Bacteria 17965
29 Ga0070707_100024942 3300005468 Bacteria 5669
30 Ga0070707_100118347 3300005468 Bacteria 2572
31 Ga0070707_100276680 3300005468 Bacteria 1632
32 Ga0070707_100285814 3300005468 Bacteria 1603
33 Ga0070698_100004307 3300005471 Bacteria 15658
34 Ga0070698_100166335 3300005471 Bacteria 2148
35 Ga0070698_100202044 3300005471 Bacteria 1923
36 Ga0070698_100371352 3300005471 Bacteria 1362
37 Ga0070698_100376276 3300005471 Bacteria 1352
38 Ga0070699_100054876 3300005518 Bacteria 3450
39 Ga0070699_100119809 3300005518 Bacteria 2313
40 Ga0070699_100376752 3300005518 Unclassified 1281
41 Ga0070697_100015354 3300005536 Bacteria 6010
42 Ga0070697_100431694 3300005536 Bacteria 1146
43 Ga0070686_100011274 3300005544 Bacteria 5065
44 Ga0070686_100256540 3300005544 Bacteria 1280
45 Ga0070695_100057167 3300005545 Bacteria 2520
46 Ga0070695_100507606 3300005545 Unclassified 934
47 Ga0070696_100062517 3300005546 Unclassified 2606
48 Ga0070704_100068335 3300005549 Unclassified 2569
49 Ga0068857_100071903 3300005577 Unclassified 3083
50 Ga0068859_100046094 3300005617 Bacteria 4379
51 Ga0068859_100251248 3300005617 Bacteria 1859
52 Ga0068859_100959676 3300005617 Bacteria 938
53 Ga0068864_100118755 3300005618 Bacteria 2362
54 Ga0068866_10015916 3300005718 Unclassified 3351
55 Ga0068861_100075679 3300005719 Bacteria 2621
56 Ga0068861_100517310 3300005719 Bacteria 1082
57 Ga0068858_100013022 3300005842 Bacteria 7844
58 Ga0068860_100358317 3300005843 Bacteria 1437
59 Ga0068860_100450974 3300005843 Bacteria 1279
60 Ga0075365_10298149 3300006038 Bacteria 1134
61 Ga0075368_10007894 3300006042 Bacteria 3774
62 Ga0075363_100285502 3300006048 Bacteria 956
63 Ga0075362_10002517 3300006177 Bacteria 6172
64 Ga0075367_10002400 3300006178 Bacteria 8550
65 Ga0075367_10008447 3300006178 Bacteria 5335
66 Ga0075367_10055545 3300006178 Bacteria 2350
67 Ga0075367_10065190 3300006178 Bacteria 2181
68 Ga0075369_10047292 3300006186 Bacteria 1855
69 Ga0075366_10003958 3300006195 Bacteria 7906
70 Ga0075366_10016183 3300006195 Bacteria 4283
71 Ga0075366_10027015 3300006195 Bacteria 3366
72 Ga0075366_10051898 3300006195 Bacteria 2437
73 Ga0075366_10066997 3300006195 Bacteria 2136
74 Ga0075366_10157262 3300006195 Bacteria 1377
75 Ga0075370_10044576 3300006353 Bacteria 2507
76 Ga0075370_10093318 3300006353 Bacteria 1738
77 Ga0068871_100125975 3300006358 Bacteria 2168
78 Ga0075428_100011807 3300006844 Bacteria 9721
79 Ga0075428_100295505 3300006844 Bacteria 1742
80 Ga0075428_100522284 3300006844 Bacteria 1270
81 Ga0075430_100043008 3300006846 Bacteria 3819
82 Ga0075431_100007083 3300006847 Bacteria 11141
83 Ga0075431_100038550 3300006847 Bacteria 4921
84 Ga0075431_100112766 3300006847 Bacteria 2806
85 Ga0075433_10021155 3300006852 Bacteria 5452
86 Ga0075433_10126614 3300006852 Bacteria 2268
87 Ga0075433_10263406 3300006852 Bacteria 1528
88 Ga0075434_101098383 3300006871 Bacteria 809
89 Ga0075429_100068280 3300006880 Unclassified 3093
90 Ga0068865_100078354 3300006881 Bacteria 2364
91 Ga0097620_100046092 3300006931 Bacteria 4379
92 Ga0097620_100251274 3300006931 Bacteria 1859
93 Ga0097620_100959557 3300006931 Bacteria 938
94 Ga0075435_100012815 3300007076 Bacteria 6214
95 Ga0111539_10003069 3300009094 Bacteria 22129
96 Ga0111539_10003324 3300009094 Bacteria 21234
97 Ga0111539_10472398 3300009094 Unclassified 1460
98 Ga0105245_10127515 3300009098 Unclassified 2384
99 Ga0114129_10002790 3300009147 Bacteria 24356
100 Ga0114129_10007523 3300009147 Bacteria 15516
101 Ga0114129_10023761 3300009147 Bacteria 8688
102 Ga0114129_10042925 3300009147 Bacteria 6364
103 Ga0114129_10079257 3300009147 Bacteria 4567
104 Ga0114129_10084117 3300009147 Bacteria 4418
105 Ga0114129_10116747 3300009147 Bacteria 3677
106 Ga0114129_10138095 3300009147 Bacteria 3344
107 Ga0114129_10138183 3300009147 Bacteria 3343
108 Ga0114129_10156960 3300009147 Bacteria 3111
109 Ga0114129_10163891 3300009147 Bacteria 3035
110 Ga0114129_10263517 3300009147 Bacteria 2308
111 Ga0114129_10847960 3300009147 Bacteria 1162
112 Ga0114129_10903693 3300009147 Bacteria 1119
113 Ga0105242_10047558 3300009176 Unclassified 3483
114 Ga0105242_10788964 3300009176 Bacteria 939
115 Ga0105248_10112400 3300009177 Unclassified 3072
116 Ga0105249_10130901 3300009553 Bacteria 2395
117 Ga0105239_10420140 3300010375 Bacteria 1515
118 Ga0157375_10051106 3300013308 Unclassified 4058
119 Ga0157380_10006055 3300014326 Bacteria 8475
120 Ga0157380_10915677 3300014326 Bacteria 904
121 Ga0157379_10074016 3300014968 Unclassified 3049
122 Ga0163161_10271070 3300017792 Bacteria 1328
123 Ga0207680_10118407 3300025903 Bacteria 1729
124 Ga0207645_10029817 3300025907 Unclassified 3516
125 Ga0207684_10001678 3300025910 Bacteria 23515
126 Ga0207684_10066216 3300025910 Bacteria 3068
127 Ga0207684_10102552 3300025910 Bacteria 2446
128 Ga0207662_10040189 3300025918 Unclassified 2748
129 Ga0207646_10003173 3300025922 Bacteria 18808
130 Ga0207646_10045883 3300025922 Bacteria 3921
131 Ga0207646_10052404 3300025922 Bacteria 3651
132 Ga0207646_10131513 3300025922 Unclassified 2252
133 Ga0207646_10240613 3300025922 Bacteria 1635
134 Ga0207646_10244817 3300025922 Bacteria 1620
135 Ga0207659_10158507 3300025926 Bacteria 1774
136 Ga0207706_10139492 3300025933 Unclassified 2132
137 Ga0207686_10180820 3300025934 Bacteria 1495
138 Ga0207709_10081509 3300025935 Bacteria 2087
139 Ga0207670_10051805 3300025936 Bacteria 2758
140 Ga0207669_10232366 3300025937 Bacteria 1361
141 Ga0207704_10025991 3300025938 Unclassified 3205
142 Ga0207711_10178621 3300025941 Bacteria 1929
143 Ga0207689_10024434 3300025942 Bacteria 5071
144 Ga0207651_10055272 3300025960 Unclassified 2726
145 Ga0207668_11077339 3300025972 Bacteria 720
146 Ga0207640_10561124 3300025981 Bacteria 961
147 Ga0207658_10125383 3300025986 Bacteria 2054
148 Ga0207703_10321863 3300026035 Bacteria 1416
149 Ga0207678_10022765 3300026067 Bacteria 5487
150 Ga0207708_10031420 3300026075 Unclassified 4029
151 Ga0207708_10410788 3300026075 Unclassified 1121
152 Ga0207641_10279963 3300026088 Bacteria 1568
153 Ga0207648_10002116 3300026089 Bacteria 21633
154 Ga0207676_11012989 3300026095 Unclassified 819
155 Ga0207674_10249077 3300026116 Bacteria 1723
156 Ga0207675_100682143 3300026118 Bacteria 1035
157 Ga0207683_10254752 3300026121 Bacteria 1602
158 Ga0207698_10155058 3300026142 Bacteria 1994
159 Ga0209813_10012288 3300027866 Bacteria 2259
160 Ga0207428_10000311 3300027907 Bacteria 64550
161 Ga0268266_10927025 3300028379 Bacteria 842
162 Ga0268265_10135545 3300028380 Bacteria 2053
163 Ga0268264_11208788 3300028381 Bacteria 765
164 Ga0307405_10363809 3300031731 Bacteria 1120
165 Ga0307409_100664259 3300031995 Bacteria 1038
166 Ga0307416_100655673 3300032002 Bacteria 1135
167 Ga0307411_10434605 3300032005 Bacteria 1094
168 Ga0451793_0570477 3300041452 Bacteria 1072
169 Ga0451853_1834442 3300041512 Bacteria 681
170 Ga0439460_0090266 3300042461 Bacteria 973
171 Ga0495638_0036179 3300046460 Bacteria 3146
172 Ga0495672_0026123 3300047320 Bacteria 3729
173 Ga0501036_0054545 3300049572 Bacteria 3386
174 Ga0501039_0054665 3300049575 Bacteria 3091
175 Ga0501040_0266687 3300049576 Unclassified 1222
176 Ga0501042_0163714 3300049578 Bacteria 1605
177 Ga0501048_0473653 3300049582 Bacteria 897
178 Ga0501071_0107707 3300049587 Bacteria 2058
179 Ga0501071_0130554 3300049587 Unclassified 1866
180 Ga0501071_0316894 3300049587 Bacteria 1184
181 Ga0501072_0031814 3300049588 Bacteria 4131
182 Ga0501075_0015295 3300049591 Bacteria 5504
183 Ga0501075_0069045 3300049591 Bacteria 2670
184 Ga0501075_0268680 3300049591 Bacteria 1300
185 Ga0501076_0054033 3300049592 Bacteria 3183
186 Ga0501076_0298795 3300049592 Bacteria 1320
187 Ga0501079_0062484 3300049741 Bacteria 2873
188 Ga0501081_0073130 3300049743 Bacteria 2391
189 Ga0501035_0407608 3300049822 Bacteria 1130
190 Ga0501045_0069725 3300049824 Bacteria 2585
191 nmdc:mga03683_21639_c1 3300050489 Bacteria 2483
192 nmdc:mga03n38_231671_c1 3300050490 Bacteria 968
193 nmdc:mga00v17_61985_c1 3300050491 Bacteria 2300
194 nmdc:mga0yw44_52892_c1 3300050492 Unclassified 2464
195 nmdc:mga0k408_10709_c1 3300050493 Bacteria 4968
196 nmdc:mga0k408_111697_c1 3300050493 Unclassified 1315
197 nmdc:mga0k408_138400_c1 3300050493 Bacteria 1447
198 nmdc:mga0k408_16137_c1 3300050493 Bacteria 4140
199 nmdc:mga0k408_50011_c1 3300050493 Bacteria 2419
200 nmdc:mga06z11_22475_c1 3300050494 Bacteria 2947
201 nmdc:mga06z11_258340_c1 3300050494 Unclassified 1027
202 nmdc:mga06z11_30181_c1 3300050494 Bacteria 2621
203 nmdc:mga04h51_9098_c1 3300050495 Bacteria 2678
204 nmdc:mga07m45_226369_c1 3300050496 Bacteria 1088
205 nmdc:mga07m45_53134_c1 3300050496 Bacteria 2289
206 nmdc:mga05p37_134732_c1 3300050507 Bacteria 3030
207 nmdc:mga05p37_150491_c1 3300050507 Bacteria 2847
208 nmdc:mga05p37_219870_c1 3300050507 Unclassified 2293
209 nmdc:mga05p37_273504_c1 3300050507 Bacteria 1690
210 nmdc:mga05p37_336568_c1 3300050507 Unclassified 1781
211 nmdc:mga05p37_354048_c1 3300050507 Bacteria 1728
212 nmdc:mga05p37_39086_c1 3300050507 Bacteria 5822
213 nmdc:mga05p37_566075_c1 3300050507 Bacteria 1290
214 nmdc:mga05p37_77243_c1 3300050507 Bacteria 4099
215 nmdc:mga05p37_82830_c1 3300050507 Bacteria 3953
216 nmdc:mga09592_14526_c1 3300050508 Bacteria 6427
217 nmdc:mga09592_46915_c1 3300050508 Bacteria 3640
218 nmdc:mga06r32_19537_c1 3300050510 Bacteria 6222
219 nmdc:mga06r32_31815_c1 3300050510 Bacteria 4958
220 nmdc:mga06r32_579087_c1 3300050510 Bacteria 1095
221 nmdc:mga06r32_620301_c1 3300050510 Bacteria 1051
222 nmdc:mga08y16_10901_c1 3300050511 Bacteria 9548
223 nmdc:mga08y16_513883_c1 3300050511 Bacteria 1215
224 nmdc:mga0n895_278869_c1 3300050512 Bacteria 1695
225 nmdc:mga0n895_430473_c1 3300050512 Unclassified 1333
226 nmdc:mga0rr50_475696_c1 3300050513 Bacteria 1061
227 nmdc:mga0a205_185193_c1 3300050515 Bacteria 1975
228 nmdc:mga0a205_288680_c1 3300050515 Bacteria 1515
229 nmdc:mga0a205_5287_c1 3300050515 Bacteria 11626
230 nmdc:mga0sz30_164210_c1 3300050516 Unclassified 984
231 Ga0500641_0038244 3300053096 Unclassified 1927
232 Ga0500555_000202 3300053103 Bacteria 27708
233 Ga0500568_0001032 3300053139 Bacteria 19065
234 Ga0500616_0001035 3300053153 Bacteria 29472
235 Ga0500611_071177 3300053727 Bacteria 848
236 Ga0500645_000166 3300053730 Bacteria 51799
237 Ga0590074_003715 3300059423 Bacteria 2525
238 Ga0105243_10053581
239 Ga0070676_10009665
240 Ga0070676_10032454
241 Ga0070676_10087409
242 Ga0070676_10099100
243 Ga0068869_100014759
244 Ga0068869_100509655
245 Ga0070689_100043008
246 Ga0070691_10073446
247 Ga0070687_100003400
248 Ga0070669_100098944
249 Ga0070674_100040517
250 Ga0070688_100087480
251 Ga0070700_100076837
252 Ga0070694_100018279
253 Ga0070694_100247656
254 Ga0070708_100339220
255 Ga0070708_100544660
256 Ga0070663_100072403
257 Ga0070678_100319353
258 Ga0070662_100415796
259 Ga0068867_100003303
260 Ga0070685_10030931
261 Ga0070706_100004521
262 Ga0070706_100033416
263 Ga0070706_100063808
264 Ga0070706_100071166
265 Ga0070707_100002375
266 Ga0070707_100024942
267 Ga0070707_100118347
268 Ga0070707_100276680
269 Ga0070707_100285814
270 Ga0070698_100004307
271 Ga0070698_100166335
272 Ga0070698_100202044
273 Ga0070698_100371352
274 Ga0070698_100376276
275 Ga0070699_100054876
276 Ga0070699_100119809
277 Ga0070699_100376752
278 Ga0070697_100015354
279 Ga0070697_100431694
280 Ga0070686_100011274
281 Ga0070686_100256540
282 Ga0070695_100057167
283 Ga0070695_100507606
284 Ga0070696_100062517
285 Ga0070704_100068335
286 Ga0068857_100071903
287 Ga0068859_100046094
288 Ga0068859_100251248
289 Ga0068859_100959676
290 Ga0068864_100118755
291 Ga0068866_10015916
292 Ga0068861_100075679
293 Ga0068861_100517310
294 Ga0068858_100013022
295 Ga0068860_100358317
296 Ga0068860_100450974
297 Ga0075365_10298149
298 Ga0075368_10007894
299 Ga0075363_100285502
300 Ga0075362_10002517
301 Ga0075367_10002400
302 Ga0075367_10008447
303 Ga0075367_10055545
304 Ga0075367_10065190
305 Ga0075369_10047292
306 Ga0075366_10003958
307 Ga0075366_10016183
308 Ga0075366_10027015
309 Ga0075366_10051898
310 Ga0075366_10066997
311 Ga0075366_10157262
312 Ga0075370_10044576
313 Ga0075370_10093318
314 Ga0068871_100125975
315 Ga0075428_100011807
316 Ga0075428_100295505
317 Ga0075428_100522284
318 Ga0075430_100043008
319 Ga0075431_100007083
320 Ga0075431_100038550
321 Ga0075431_100112766
322 Ga0075433_10021155
323 Ga0075433_10126614
324 Ga0075433_10263406
325 Ga0075434_101098383
326 Ga0075429_100068280
327 Ga0068865_100078354
328 Ga0097620_100046092
329 Ga0097620_100251274
330 Ga0097620_100959557
331 Ga0075435_100012815
332 Ga0111539_10003069
333 Ga0111539_10003324
334 Ga0111539_10472398
335 Ga0105245_10127515
336 Ga0114129_10002790
337 Ga0114129_10007523
338 Ga0114129_10023761
339 Ga0114129_10042925
340 Ga0114129_10079257
341 Ga0114129_10084117
342 Ga0114129_10116747
343 Ga0114129_10138095
344 Ga0114129_10138183
345 Ga0114129_10156960
346 Ga0114129_10163891
347 Ga0114129_10263517
348 Ga0114129_10847960
349 Ga0114129_10903693
350 Ga0105242_10047558
351 Ga0105242_10788964
352 Ga0105248_10112400
353 Ga0105249_10130901
354 Ga0105239_10420140
355 Ga0157375_10051106
356 Ga0157380_10006055
357 Ga0157380_10915677
358 Ga0157379_10074016
359 Ga0163161_10271070
360 Ga0207680_10118407
361 Ga0207645_10029817
362 Ga0207684_10001678
363 Ga0207684_10066216
364 Ga0207684_10102552
365 Ga0207662_10040189
366 Ga0207646_10003173
367 Ga0207646_10045883
368 Ga0207646_10052404
369 Ga0207646_10131513
370 Ga0207646_10240613
371 Ga0207646_10244817
372 Ga0207659_10158507
373 Ga0207706_10139492
374 Ga0207686_10180820
375 Ga0207709_10081509
376 Ga0207670_10051805
377 Ga0207669_10232366
378 Ga0207704_10025991
379 Ga0207711_10178621
380 Ga0207689_10024434
381 Ga0207651_10055272
382 Ga0207668_11077339
383 Ga0207640_10561124
384 Ga0207658_10125383
385 Ga0207703_10321863
386 Ga0207678_10022765
387 Ga0207708_10031420
388 Ga0207708_10410788
389 Ga0207641_10279963
390 Ga0207648_10002116
391 Ga0207676_11012989
392 Ga0207674_10249077
393 Ga0207675_100682143
394 Ga0207683_10254752
395 Ga0207698_10155058
396 Ga0209813_10012288
397 Ga0207428_10000311
398 Ga0268266_10927025
399 Ga0268265_10135545
400 Ga0268264_11208788
401 Ga0307405_10363809
402 Ga0307409_100664259
403 Ga0307416_100655673
404 Ga0307411_10434605
405 Ga0451793_0570477
406 Ga0451853_1834442
407 Ga0439460_0090266
408 Ga0495638_0036179
409 Ga0495672_0026123
410 Ga0501036_0054545
411 Ga0501039_0054665
412 Ga0501040_0266687
413 Ga0501042_0163714
414 Ga0501048_0473653
415 Ga0501071_0107707
416 Ga0501071_0130554
417 Ga0501071_0316894
418 Ga0501072_0031814
419 Ga0501075_0015295
420 Ga0501075_0069045
421 Ga0501075_0268680
422 Ga0501076_0054033
423 Ga0501076_0298795
424 Ga0501079_0062484
425 Ga0501081_0073130
426 Ga0501035_0407608
427 Ga0501045_0069725
428 nmdc:mga03683_21639_c1
429 nmdc:mga03n38_231671_c1
430 nmdc:mga00v17_61985_c1
431 nmdc:mga0yw44_52892_c1
432 nmdc:mga0k408_10709_c1
433 nmdc:mga0k408_111697_c1
434 nmdc:mga0k408_138400_c1
435 nmdc:mga0k408_16137_c1
436 nmdc:mga0k408_50011_c1
437 nmdc:mga06z11_22475_c1
438 nmdc:mga06z11_258340_c1
439 nmdc:mga06z11_30181_c1
440 nmdc:mga04h51_9098_c1
441 nmdc:mga07m45_226369_c1
442 nmdc:mga07m45_53134_c1
443 nmdc:mga05p37_134732_c1
444 nmdc:mga05p37_150491_c1
445 nmdc:mga05p37_219870_c1
446 nmdc:mga05p37_273504_c1
447 nmdc:mga05p37_336568_c1
448 nmdc:mga05p37_354048_c1
449 nmdc:mga05p37_39086_c1
450 nmdc:mga05p37_566075_c1
451 nmdc:mga05p37_77243_c1
452 nmdc:mga05p37_82830_c1
453 nmdc:mga09592_14526_c1
454 nmdc:mga09592_46915_c1
455 nmdc:mga06r32_19537_c1
456 nmdc:mga06r32_31815_c1
457 nmdc:mga06r32_579087_c1
458 nmdc:mga06r32_620301_c1
459 nmdc:mga08y16_10901_c1
460 nmdc:mga08y16_513883_c1
461 nmdc:mga0n895_278869_c1
462 nmdc:mga0n895_430473_c1
463 nmdc:mga0rr50_475696_c1
464 nmdc:mga0a205_185193_c1
465 nmdc:mga0a205_288680_c1
466 nmdc:mga0a205_5287_c1
467 nmdc:mga0sz30_164210_c1
468 Ga0500641_0038244
469 Ga0500555_000202
470 Ga0500568_0001032
471 Ga0500616_0001035
472 Ga0500611_071177
473 Ga0500645_000166
474 Ga0590074_003715

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13618

Gluconate_2-dh3

Gluconate 2-dehydrogenase subunit 3

53

216

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
8hki-assembly1.cif.gz_A human tric open state 0.3385 36 168
3p0a-assembly1.cif.gz_A x-ray structure of pentameric hiv-1 ca 0.3234 32 166
4e91-assembly1.cif.gz_A crystal structure of the n-terminal domain of hiv-1 capsid in complex with inhibitor bd3 0.3216 32 166
4u0b-assembly1.cif.gz_C hexamer hiv-1 ca in complex with cpsf6 peptide, p212121 crystal form 0.3192 32 166
4u0b-assembly1.cif.gz_A hexamer hiv-1 ca in complex with cpsf6 peptide, p212121 crystal form 0.3155 32 166
ID Description Score Start End Superfamily
af_P9WMV7_1_132_2.30.31.10 Mainly Beta;Roll;Transcriptional Co-activator pc4; Chain A;Transcriptional Coactivator Pc4; Chain A 0.6371 60 187 2.30.31.10
af_P9WMV7_1_132_2.30.31.10 Mainly Beta;Roll;Transcriptional Co-activator pc4; Chain A;Transcriptional Coactivator Pc4; Chain A 0.6056 60 187 2.30.31.10
2xheA03 Alpha Beta;Alpha-Beta Complex;Syntaxin Binding Protein 1; Chain A, domain 2;Sec1/Munc18 (SM) protein, domain 3a 0.4369 102 166 3.90.830.10
af_O96221_1365_1471_1.20.940.10 Mainly Alpha;Up-down Bundle;RNA Binding Protein, Prp18; Chain A;Functional domain of the splicing factor Prp18 0.3719 53 163 1.20.940.10
af_P9WK41_35_110_1.10.890.10 Mainly Alpha;Orthogonal Bundle;10k-s Protein, Hypothetical Protein A; Chain A;HNS-dependent expression A 0.3678 91 164 1.10.890.10
ID Description Score Start End GO Terms
AF-A0A7X2ZBC1-F1-model_v4 Gluconate 2-dehydrogenase subunit 3 family protein 0.9371 53 167
AF-A0A1H0SPR5-F1-model_v4 Gluconate 2-dehydrogenase gamma chain 0.9328 50 167
AF-A0A3A5MNM7-F1-model_v4 Gluconate 2-dehydrogenase subunit 3 family protein 0.9181 50 167
AF-A0A0Q8UZL7-F1-model_v4 Gluconate 2-dehydrogenase 0.9155 56 167
AF-A0A2V7KLX4-F1-model_v4 Gluconate 2-dehydrogenase subunit 3 family protein 0.901 49 190

Map