F349917

General Info

Members Datasets Scaffolds Average Seq Length
237 115 474 300

Family's Representative Sequence

Representative Sequence 3300006871|Ga0075434_100473010|Ga0075434_1004730102
Length 346
Sequence MSNTAEGRTGGRAVARARVSPVGLVRLTPNSPDRPLTPVIVGPTALSLGQRLPVTIISADARQVYRRLDIGTAKPAPALRAQVPHEGIDLVDPGERYSAGRFARDAAGWLTAARAGGRLPLVVGGTGFYVRALADGLFQEPPLDPARREQVREWATTLPGADLSRWALRLDPRFSGAGRQRAARAIEVALLTGRPLSLWQRMARVAGVMRPWYIVLTLPRELLRRRIAERVDAMLAAGLVDEVRDELARGTAPTAAGLDGVGYREVVAMLTGQLYQDDLRDAIVRSSRQYAKRQETWFRNQLRYRPSAIGYQPDSVWTLDATKDPAELAEAIVARWQAVAPIADSR

Samples

Sample ID Description Type Environment
1 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
4 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
5 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
13 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
14 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
15 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
20 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
25 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
26 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
43 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
44 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
45 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
46 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
47 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
48 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
49 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
50 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
51 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
52 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
53 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
54 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
55 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
56 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
57 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
58 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
59 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
60 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
61 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
62 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
63 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
64 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
65 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
66 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
67 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
68 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
69 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
70 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
71 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
72 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
73 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
74 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
75 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
76 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
85 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
86 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
87 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
88 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
89 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
90 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
91 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
92 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
93 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
94 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
95 3300049672 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought Metagenome Rhizosphere
96 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
97 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
98 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
99 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
100 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
101 3300049760 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_A_4_control Metagenome Rhizosphere
102 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
103 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
104 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
105 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
106 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
107 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
108 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
109 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
110 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
111 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
112 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
113 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
114 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
115 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 13.5
Rhizosphere 86.5
Stem 0
Stem Tuber 0
Unclassified 7.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075434_100473010 3300006871 Bacteria 1274
2 Ga0070680_100001852 3300005336 Bacteria 15502
3 Ga0070689_100163373 3300005340 Bacteria 1801
4 Ga0070705_100001571 3300005440 Bacteria 11968
5 Ga0070705_100027718 3300005440 Bacteria 3095
6 Ga0070705_100035841 3300005440 Bacteria 2784
7 Ga0070705_100065644 3300005440 Bacteria 2173
8 Ga0070705_100322781 3300005440 Unclassified 1115
9 Ga0070694_100007693 3300005444 Bacteria 6578
10 Ga0070694_100051806 3300005444 Bacteria 2772
11 Ga0070694_100109607 3300005444 Bacteria 1965
12 Ga0070708_100023028 3300005445 Bacteria 5291
13 Ga0070708_100134705 3300005445 Bacteria 2288
14 Ga0070708_100251983 3300005445 Bacteria 1658
15 Ga0070681_10128419 3300005458 Bacteria 2467
16 Ga0070706_100003551 3300005467 Bacteria 15336
17 Ga0070706_100355760 3300005467 Unclassified 1365
18 Ga0070707_100003809 3300005468 Bacteria 14232
19 Ga0070707_100065105 3300005468 Unclassified 3501
20 Ga0070707_100143384 3300005468 Bacteria 2325
21 Ga0070698_100101406 3300005471 Bacteria 2850
22 Ga0070699_100007290 3300005518 Bacteria 9626
23 Ga0070699_100044393 3300005518 Bacteria 3848
24 Ga0070697_100003170 3300005536 Bacteria 12633
25 Ga0070697_100013388 3300005536 Bacteria 6434
26 Ga0070695_100000223 3300005545 Bacteria 27796
27 Ga0070695_100000535 3300005545 Bacteria 20087
28 Ga0070696_100000167 3300005546 Bacteria 37261
29 Ga0070696_100001756 3300005546 Bacteria 14216
30 Ga0070696_100002581 3300005546 Bacteria 12002
31 Ga0070696_100078519 3300005546 Bacteria 2334
32 Ga0070696_100127587 3300005546 Bacteria 1847
33 Ga0070704_100000229 3300005549 Bacteria 23761
34 Ga0070704_100002868 3300005549 Bacteria 9769
35 Ga0070704_100007268 3300005549 Bacteria 6588
36 Ga0068856_100256761 3300005614 Bacteria 1763
37 Ga0068859_100068691 3300005617 Bacteria 3578
38 Ga0068864_100116807 3300005618 Bacteria 2381
39 Ga0068864_100191557 3300005618 Bacteria 1875
40 Ga0081538_10042112 3300005981 Bacteria 2887
41 Ga0070715_10147485 3300006163 Bacteria 1149
42 Ga0075428_100028352 3300006844 Bacteria 6193
43 Ga0075428_100046333 3300006844 Bacteria 4776
44 Ga0075430_100009157 3300006846 Bacteria 8368
45 Ga0075431_100003316 3300006847 Bacteria 15593
46 Ga0075431_100034209 3300006847 Bacteria 5236
47 Ga0075431_100258876 3300006847 Bacteria 1766
48 Ga0075433_10024709 3300006852 Bacteria 5074
49 Ga0075433_10235547 3300006852 Unclassified 1625
50 Ga0075434_100017998 3300006871 Bacteria 6818
51 Ga0075434_100067784 3300006871 Bacteria 3554
52 Ga0075434_100172735 3300006871 Bacteria 2181
53 Ga0075429_100335196 3300006880 Bacteria 1324
54 Ga0075436_100114829 3300006914 Bacteria 1880
55 Ga0097620_100068690 3300006931 Bacteria 3578
56 Ga0099794_10000410 3300007265 Bacteria 14415
57 Ga0099794_10000842 3300007265 Bacteria 10370
58 Ga0111539_10296878 3300009094 Bacteria 1880
59 Ga0114129_10001851 3300009147 Bacteria 28824
60 Ga0114129_10454396 3300009147 Bacteria 1680
61 Ga0114129_11093099 3300009147 Bacteria 999
62 Ga0207685_10016299 3300025905 Unclassified 2376
63 Ga0207684_10049736 3300025910 Bacteria 3556
64 Ga0207707_10009060 3300025912 Bacteria 8645
65 Ga0207663_10040956 3300025916 Bacteria 2819
66 Ga0207646_10070791 3300025922 Bacteria 3115
67 Ga0207646_10128437 3300025922 Bacteria 2280
68 Ga0207670_10172098 3300025936 Bacteria 1625
69 Ga0207679_10040958 3300025945 Bacteria 3319
70 Ga0207678_10246943 3300026067 Bacteria 1528
71 Ga0207708_10086369 3300026075 Bacteria 2414
72 Ga0207676_10126227 3300026095 Bacteria 2167
73 Ga0209588_1001495 3300027671 Bacteria 6147
74 Ga0209588_1005858 3300027671 Bacteria 3541
75 Ga0307408_100009780 3300031548 Bacteria 6323
76 Ga0307408_100012469 3300031548 Bacteria 5632
77 Ga0307405_10042866 3300031731 Bacteria 2757
78 Ga0307405_10255782 3300031731 Bacteria 1305
79 Ga0307405_10286733 3300031731 Bacteria 1242
80 Ga0307413_10017206 3300031824 Bacteria 3760
81 Ga0307413_10132735 3300031824 Bacteria 1707
82 Ga0307413_10176278 3300031824 Bacteria 1519
83 Ga0307410_10014392 3300031852 Bacteria 4653
84 Ga0307410_10016110 3300031852 Unclassified 4449
85 Ga0307410_10023831 3300031852 Bacteria 3814
86 Ga0307410_10031228 3300031852 Unclassified 3415
87 Ga0307410_10098616 3300031852 Bacteria 2090
88 Ga0307406_10045701 3300031901 Bacteria 2751
89 Ga0307406_10173670 3300031901 Unclassified 1562
90 Ga0307407_10042329 3300031903 Bacteria 2553
91 Ga0307412_10077921 3300031911 Bacteria 2281
92 Ga0307409_100021789 3300031995 Unclassified 4402
93 Ga0307409_100038709 3300031995 Bacteria 3530
94 Ga0307409_100048084 3300031995 Bacteria 3243
95 Ga0307409_100053257 3300031995 Bacteria 3108
96 Ga0307409_100089589 3300031995 Bacteria 2515
97 Ga0307409_100099476 3300031995 Unclassified 2408
98 Ga0307409_100206137 3300031995 Bacteria 1763
99 Ga0307409_100225165 3300031995 Bacteria 1696
100 Ga0307409_100257588 3300031995 Bacteria 1599
101 Ga0307416_100001529 3300032002 Bacteria 12645
102 Ga0307416_100009538 3300032002 Bacteria 6359
103 Ga0307416_100037231 3300032002 Bacteria 3741
104 Ga0307416_100118472 3300032002 Bacteria 2353
105 Ga0307416_100264053 3300032002 Bacteria 1685
106 Ga0307416_100639575 3300032002 Unclassified 1147
107 Ga0307414_10005310 3300032004 Bacteria 7085
108 Ga0307414_10022052 3300032004 Bacteria 4009
109 Ga0307411_10027596 3300032005 Bacteria 3438
110 Ga0307411_10193226 3300032005 Bacteria 1556
111 Ga0307411_10259061 3300032005 Bacteria 1372
112 Ga0307415_100070738 3300032126 Bacteria 2451
113 Ga0307415_100081848 3300032126 Bacteria 2308
114 Ga0307415_100159594 3300032126 Bacteria 1746
115 Ga0373928_0017023 3300035084 Bacteria 1493
116 Ga0373931_0064013 3300035691 Bacteria 1989
117 Ga0373931_0082830 3300035691 Bacteria 1774
118 Ga0373931_0132847 3300035691 Bacteria 1434
119 Ga0373931_0223922 3300035691 Bacteria 1134
120 Ga0395905_0296580 3300037471 Unclassified 1504
121 Ga0439448_0013873 3300042005 Bacteria 2426
122 Ga0439446_0031808 3300042156 Bacteria 1528
123 Ga0453683_0032405 3300044673 Bacteria 3298
124 Ga0453683_0363970 3300044673 Unclassified 930
125 Ga0451576_0020322 3300045051 Bacteria 7233
126 Ga0496101_0036721 3300048904 Bacteria 3471
127 Ga0496102_0002358 3300048905 Bacteria 16114
128 Ga0496102_0085604 3300048905 Bacteria 2911
129 Ga0496103_0036552 3300048906 Bacteria 3008
130 Ga0496103_0069615 3300048906 Bacteria 2200
131 Ga0496104_0014099 3300048907 Bacteria 7215
132 Ga0496104_0192852 3300048907 Bacteria 1949
133 Ga0496105_0023777 3300048908 Bacteria 4975
134 Ga0496106_0081504 3300048909 Bacteria 2486
135 Ga0496106_0442707 3300048909 Bacteria 1044
136 Ga0496107_0128631 3300048910 Bacteria 1869
137 Ga0496107_0138299 3300048910 Bacteria 1800
138 Ga0496107_0251317 3300048910 Bacteria 1315
139 Ga0496108_0002016 3300048911 Bacteria 16262
140 Ga0496108_0003607 3300048911 Bacteria 12399
141 Ga0496109_0003977 3300048912 Bacteria 12340
142 Ga0496109_0054051 3300048912 Bacteria 3664
143 Ga0496109_0200289 3300048912 Bacteria 1877
144 Ga0496110_0010453 3300048913 Bacteria 7548
145 Ga0496110_0010852 3300048913 Bacteria 7430
146 Ga0496110_0052836 3300048913 Unclassified 3570
147 Ga0496111_0063089 3300048914 Bacteria 2687
148 Ga0496112_0001166 3300048915 Bacteria 19657
149 Ga0496112_0003875 3300048915 Bacteria 12505
150 Ga0496112_0028271 3300048915 Bacteria 5411
151 Ga0496112_0175714 3300048915 Bacteria 2106
152 Ga0496113_0003881 3300048916 Bacteria 9051
153 Ga0496113_0015835 3300048916 Bacteria 5196
154 Ga0496113_0029313 3300048916 Bacteria 3972
155 Ga0496114_0248923 3300048917 Bacteria 1564
156 Ga0496115_0052154 3300048918 Bacteria 3281
157 Ga0496115_0297105 3300048918 Bacteria 1324
158 Ga0501031_0028435 3300049568 Bacteria 3644
159 Ga0501036_0083930 3300049572 Bacteria 2693
160 Ga0501037_0175475 3300049573 Bacteria 1522
161 Ga0501040_0037993 3300049576 Bacteria 3273
162 Ga0501040_0042667 3300049576 Bacteria 3090
163 Ga0501040_0045240 3300049576 Bacteria 3002
164 Ga0501041_0009184 3300049577 Bacteria 5825
165 Ga0501041_0018180 3300049577 Bacteria 4187
166 Ga0501042_0011860 3300049578 Bacteria 5886
167 Ga0501042_0275647 3300049578 Bacteria 1214
168 Ga0501046_0058586 3300049580 Bacteria 3019
169 Ga0501046_0140042 3300049580 Bacteria 1831
170 Ga0501048_0026268 3300049582 Bacteria 4239
171 Ga0501067_0010586 3300049583 Bacteria 5103
172 Ga0501067_0139633 3300049583 Bacteria 1349
173 Ga0501068_0015942 3300049584 Bacteria 4328
174 Ga0501069_0001314 3300049585 Bacteria 12169
175 Ga0501069_0017014 3300049585 Bacteria 3909
176 Ga0501069_0029249 3300049585 Bacteria 3024
177 Ga0501070_0302924 3300049586 Bacteria 1302
178 Ga0501071_0002247 3300049587 Bacteria 11625
179 Ga0501071_0059579 3300049587 Bacteria 2762
180 Ga0501072_0026952 3300049588 Bacteria 4485
181 Ga0501072_0062885 3300049588 Bacteria 2928
182 Ga0501072_0242426 3300049588 Bacteria 1436
183 Ga0501074_0006877 3300049590 Bacteria 8215
184 Ga0501074_0347832 3300049590 Bacteria 1052
185 Ga0501074_0396026 3300049590 Bacteria 979
186 Ga0501075_0043134 3300049591 Bacteria 3383
187 Ga0501075_0152352 3300049591 Bacteria 1762
188 Ga0501076_0007638 3300049592 Bacteria 7873
189 Ga0501076_0058709 3300049592 Bacteria 3059
190 Ga0501077_0003860 3300049593 Bacteria 9034
191 Ga0501077_0034306 3300049593 Bacteria 3229
192 Ga0501235_006609 3300049669 Bacteria 2524
193 Ga0501235_029593 3300049669 Bacteria 1233
194 Ga0501239_000641 3300049672 Bacteria 2773
195 Ga0501243_001806 3300049675 Bacteria 3101
196 Ga0501079_0019375 3300049741 Bacteria 5196
197 Ga0501079_0149438 3300049741 Bacteria 1821
198 Ga0501079_0295872 3300049741 Bacteria 1266
199 Ga0501080_0464070 3300049742 Bacteria 1134
200 Ga0501081_0028150 3300049743 Bacteria 3791
201 Ga0501081_0033278 3300049743 Bacteria 3502
202 Ga0501083_0157830 3300049744 Bacteria 1484
203 Ga0501083_0252663 3300049744 Bacteria 1147
204 Ga0501263_000497 3300049760 Bacteria 2967
205 Ga0501268_003667 3300049765 Bacteria 2116
206 Ga0501045_0003249 3300049824 Bacteria 11099
207 nmdc:mga05p37_12564_c1 3300050507 Bacteria 10111
208 nmdc:mga05p37_243171_c1 3300050507 Bacteria 2162
209 nmdc:mga05p37_74866_c1 3300050507 Bacteria 4167
210 nmdc:mga0qj67_67999_c1 3300050509 Bacteria 2839
211 nmdc:mga06r32_10646_c1 3300050510 Bacteria 8296
212 nmdc:mga06r32_80158_c1 3300050510 Bacteria 3176
213 nmdc:mga08y16_439670_c1 3300050511 Bacteria 1331
214 nmdc:mga0n895_10282_c1 3300050512 Bacteria 8248
215 nmdc:mga0n895_36425_c1 3300050512 Bacteria 4751
216 nmdc:mga0n895_5253_c1 3300050512 Bacteria 10789
217 nmdc:mga0rr50_200744_c1 3300050513 Bacteria 1638
218 nmdc:mga08x19_20271_c1 3300050514 Bacteria 4095
219 nmdc:mga08x19_44679_c1 3300050514 Bacteria 2829
220 nmdc:mga0a205_10512_c1 3300050515 Bacteria 8504
221 nmdc:mga0a205_164530_c1 3300050515 Unclassified 2114
222 nmdc:mga0a205_17390_c1 3300050515 Bacteria 6738
223 nmdc:mga0a205_39223_c1 3300050515 Bacteria 4558
224 nmdc:mga0a205_67724_c1 3300050515 Bacteria 3022
225 Ga0501084_0006098 3300054114 Bacteria 9910
226 Ga0501084_0020150 3300054114 Bacteria 5560
227 Ga0501084_0081078 3300054114 Bacteria 2721
228 Ga0501084_0294951 3300054114 Bacteria 1369
229 Ga0501084_0347186 3300054114 Unclassified 1254
230 Ga0590071_006980 3300059421 Bacteria 2674
231 Ga0590071_018657 3300059421 Unclassified 1631
232 Ga0501082_0019448 3300060353 Bacteria 5854
233 Ga0501082_0042869 3300060353 Bacteria 3900
234 Ga0501082_0052188 3300060353 Bacteria 3525
235 Ga0501082_0076636 3300060353 Bacteria 2882
236 Ga0530510_0043984 3300061734 Bacteria 3227
237 Ga0530510_0227069 3300061734 Unclassified 1388
238 Ga0075434_100473010
239 Ga0070680_100001852
240 Ga0070689_100163373
241 Ga0070705_100001571
242 Ga0070705_100027718
243 Ga0070705_100035841
244 Ga0070705_100065644
245 Ga0070705_100322781
246 Ga0070694_100007693
247 Ga0070694_100051806
248 Ga0070694_100109607
249 Ga0070708_100023028
250 Ga0070708_100134705
251 Ga0070708_100251983
252 Ga0070681_10128419
253 Ga0070706_100003551
254 Ga0070706_100355760
255 Ga0070707_100003809
256 Ga0070707_100065105
257 Ga0070707_100143384
258 Ga0070698_100101406
259 Ga0070699_100007290
260 Ga0070699_100044393
261 Ga0070697_100003170
262 Ga0070697_100013388
263 Ga0070695_100000223
264 Ga0070695_100000535
265 Ga0070696_100000167
266 Ga0070696_100001756
267 Ga0070696_100002581
268 Ga0070696_100078519
269 Ga0070696_100127587
270 Ga0070704_100000229
271 Ga0070704_100002868
272 Ga0070704_100007268
273 Ga0068856_100256761
274 Ga0068859_100068691
275 Ga0068864_100116807
276 Ga0068864_100191557
277 Ga0081538_10042112
278 Ga0070715_10147485
279 Ga0075428_100028352
280 Ga0075428_100046333
281 Ga0075430_100009157
282 Ga0075431_100003316
283 Ga0075431_100034209
284 Ga0075431_100258876
285 Ga0075433_10024709
286 Ga0075433_10235547
287 Ga0075434_100017998
288 Ga0075434_100067784
289 Ga0075434_100172735
290 Ga0075429_100335196
291 Ga0075436_100114829
292 Ga0097620_100068690
293 Ga0099794_10000410
294 Ga0099794_10000842
295 Ga0111539_10296878
296 Ga0114129_10001851
297 Ga0114129_10454396
298 Ga0114129_11093099
299 Ga0207685_10016299
300 Ga0207684_10049736
301 Ga0207707_10009060
302 Ga0207663_10040956
303 Ga0207646_10070791
304 Ga0207646_10128437
305 Ga0207670_10172098
306 Ga0207679_10040958
307 Ga0207678_10246943
308 Ga0207708_10086369
309 Ga0207676_10126227
310 Ga0209588_1001495
311 Ga0209588_1005858
312 Ga0307408_100009780
313 Ga0307408_100012469
314 Ga0307405_10042866
315 Ga0307405_10255782
316 Ga0307405_10286733
317 Ga0307413_10017206
318 Ga0307413_10132735
319 Ga0307413_10176278
320 Ga0307410_10014392
321 Ga0307410_10016110
322 Ga0307410_10023831
323 Ga0307410_10031228
324 Ga0307410_10098616
325 Ga0307406_10045701
326 Ga0307406_10173670
327 Ga0307407_10042329
328 Ga0307412_10077921
329 Ga0307409_100021789
330 Ga0307409_100038709
331 Ga0307409_100048084
332 Ga0307409_100053257
333 Ga0307409_100089589
334 Ga0307409_100099476
335 Ga0307409_100206137
336 Ga0307409_100225165
337 Ga0307409_100257588
338 Ga0307416_100001529
339 Ga0307416_100009538
340 Ga0307416_100037231
341 Ga0307416_100118472
342 Ga0307416_100264053
343 Ga0307416_100639575
344 Ga0307414_10005310
345 Ga0307414_10022052
346 Ga0307411_10027596
347 Ga0307411_10193226
348 Ga0307411_10259061
349 Ga0307415_100070738
350 Ga0307415_100081848
351 Ga0307415_100159594
352 Ga0373928_0017023
353 Ga0373931_0064013
354 Ga0373931_0082830
355 Ga0373931_0132847
356 Ga0373931_0223922
357 Ga0395905_0296580
358 Ga0439448_0013873
359 Ga0439446_0031808
360 Ga0453683_0032405
361 Ga0453683_0363970
362 Ga0451576_0020322
363 Ga0496101_0036721
364 Ga0496102_0002358
365 Ga0496102_0085604
366 Ga0496103_0036552
367 Ga0496103_0069615
368 Ga0496104_0014099
369 Ga0496104_0192852
370 Ga0496105_0023777
371 Ga0496106_0081504
372 Ga0496106_0442707
373 Ga0496107_0128631
374 Ga0496107_0138299
375 Ga0496107_0251317
376 Ga0496108_0002016
377 Ga0496108_0003607
378 Ga0496109_0003977
379 Ga0496109_0054051
380 Ga0496109_0200289
381 Ga0496110_0010453
382 Ga0496110_0010852
383 Ga0496110_0052836
384 Ga0496111_0063089
385 Ga0496112_0001166
386 Ga0496112_0003875
387 Ga0496112_0028271
388 Ga0496112_0175714
389 Ga0496113_0003881
390 Ga0496113_0015835
391 Ga0496113_0029313
392 Ga0496114_0248923
393 Ga0496115_0052154
394 Ga0496115_0297105
395 Ga0501031_0028435
396 Ga0501036_0083930
397 Ga0501037_0175475
398 Ga0501040_0037993
399 Ga0501040_0042667
400 Ga0501040_0045240
401 Ga0501041_0009184
402 Ga0501041_0018180
403 Ga0501042_0011860
404 Ga0501042_0275647
405 Ga0501046_0058586
406 Ga0501046_0140042
407 Ga0501048_0026268
408 Ga0501067_0010586
409 Ga0501067_0139633
410 Ga0501068_0015942
411 Ga0501069_0001314
412 Ga0501069_0017014
413 Ga0501069_0029249
414 Ga0501070_0302924
415 Ga0501071_0002247
416 Ga0501071_0059579
417 Ga0501072_0026952
418 Ga0501072_0062885
419 Ga0501072_0242426
420 Ga0501074_0006877
421 Ga0501074_0347832
422 Ga0501074_0396026
423 Ga0501075_0043134
424 Ga0501075_0152352
425 Ga0501076_0007638
426 Ga0501076_0058709
427 Ga0501077_0003860
428 Ga0501077_0034306
429 Ga0501235_006609
430 Ga0501235_029593
431 Ga0501239_000641
432 Ga0501243_001806
433 Ga0501079_0019375
434 Ga0501079_0149438
435 Ga0501079_0295872
436 Ga0501080_0464070
437 Ga0501081_0028150
438 Ga0501081_0033278
439 Ga0501083_0157830
440 Ga0501083_0252663
441 Ga0501263_000497
442 Ga0501268_003667
443 Ga0501045_0003249
444 nmdc:mga05p37_12564_c1
445 nmdc:mga05p37_243171_c1
446 nmdc:mga05p37_74866_c1
447 nmdc:mga0qj67_67999_c1
448 nmdc:mga06r32_10646_c1
449 nmdc:mga06r32_80158_c1
450 nmdc:mga08y16_439670_c1
451 nmdc:mga0n895_10282_c1
452 nmdc:mga0n895_36425_c1
453 nmdc:mga0n895_5253_c1
454 nmdc:mga0rr50_200744_c1
455 nmdc:mga08x19_20271_c1
456 nmdc:mga08x19_44679_c1
457 nmdc:mga0a205_10512_c1
458 nmdc:mga0a205_164530_c1
459 nmdc:mga0a205_17390_c1
460 nmdc:mga0a205_39223_c1
461 nmdc:mga0a205_67724_c1
462 Ga0501084_0006098
463 Ga0501084_0020150
464 Ga0501084_0081078
465 Ga0501084_0294951
466 Ga0501084_0347186
467 Ga0590071_006980
468 Ga0590071_018657
469 Ga0501082_0019448
470 Ga0501082_0042869
471 Ga0501082_0052188
472 Ga0501082_0076636
473 Ga0530510_0043984
474 Ga0530510_0227069

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01715

IPPT

IPP transferase

63

301

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3crr-assembly1.cif.gz_A structure of trna dimethylallyltransferase: rna modification through a channel 0.93 2 298
3crr-assembly1.cif.gz_A structure of trna dimethylallyltransferase: rna modification through a channel 0.9073 2 298
2qgn-assembly1.cif.gz_A crystal structure of trna isopentenylpyrophosphate transferase (bh2366) from bacillus halodurans, northeast structural genomics consortium target bhr41. 0.8991 4 298
2qgn-assembly1.cif.gz_A crystal structure of trna isopentenylpyrophosphate transferase (bh2366) from bacillus halodurans, northeast structural genomics consortium target bhr41. 0.8641 4 298
3eph-assembly1.cif.gz_A crystallographic snapshots of eukaryotic dimethylallyltransferase acting on trna: insight into trna recognition and reaction mechanism 0.8158 4 294
ID Description Score Start End Superfamily
3a8tA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.96 2 110 3.40.50.300
3exaA03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 0.9567 190 271 1.10.287.890
3crrA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9464 2 113 3.40.50.300
3exaA03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 0.9452 190 271 1.10.287.890
af_A0A0P0X3E8_17_159_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.941 5 115 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A496JYQ4-F1-model_v4 deleted 0.9744 6 103
AF-A0A352SST4-F1-model_v4 tRNA (Adenosine(37)-N6)-dimethylallyltransferase MiaA 0.966 4 108 GO:0005524
GO:0006400
GO:0052381
AF-A0A329K4F9-F1-model_v4 tRNA (Adenosine(37)-N6)-dimethylallyltransferase MiaA 0.9651 5 109 GO:0005524
GO:0006400
GO:0052381
AF-A0A7V1JL28-F1-model_v4 tRNA (Adenosine(37)-N6)-dimethylallyltransferase MiaA 0.956 1 100 GO:0005524
GO:0006400
GO:0052381
AF-A0A0F9T3R4-F1-model_v4 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.9516 1 113 GO:0005524
GO:0006400
GO:0052381

Map