F348883

General Info

Members Datasets Scaffolds Average Seq Length
236 149 472 264

Family's Representative Sequence

Representative Sequence 3300005471|Ga0070698_100106709|Ga0070698_1001067092
Length 296
Sequence MALALVRVSTPRLRIPLFTMIASEVPEPTGFARLAADVREILQEQRESYELLLQMARRDLLLRYKQTAMGFGWAVSMPVLNMIIFSMIFTRVVRLDTDLPYPIFAYAGLLPWNFFASSLRFAAESLTKNTPLVTKVYFPREVLPFSAVLVSLVDFSVAATVLAGMMVWYGIGIGWTVLFLPVVLLVQILFTAGIALLLAMGNLFYRDVRYLFEVVLTVWMFATSVVYPVERIGGWLGDLLLLNPMTPIIDGYRAVLLRGELPAAGPFAAAAALSVVTLCVAWIAFHRAKFAFAENI

Samples

Sample ID Description Type Environment
1 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
45 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
46 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
47 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
48 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
57 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
65 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
96 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
100 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
101 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
102 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
103 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
104 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
105 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
106 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
107 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
108 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
109 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
110 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
111 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
112 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
113 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
114 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
115 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
116 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
117 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
118 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
119 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
120 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
121 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
122 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
123 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
124 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
125 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
126 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
127 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
129 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
130 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
131 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
132 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
133 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
134 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
135 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
136 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
137 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
138 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
139 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
140 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
141 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
142 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
143 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
144 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
145 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
146 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
147 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
148 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
149 3300053736 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.66
Nodule 0
Rhizoplane 2.12
Rhizosphere 92.8
Stem 0
Stem Tuber 0
Unclassified 10.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070698_100106709 3300005471 Bacteria 2769
2 MBSR1b_contig_13592692 2162886012 Bacteria 1751
3 rootH1_10404260 3300003323 Unclassified 1035
4 Ga0065712_10077462 3300005290 Bacteria 3491
5 Ga0065715_10095957 3300005293 Bacteria 3973
6 Ga0065715_10149758 3300005293 Bacteria 1743
7 Ga0070676_10065924 3300005328 Bacteria 2163
8 Ga0070690_100077955 3300005330 Bacteria 2164
9 Ga0070690_100084628 3300005330 Bacteria 2079
10 Ga0070670_100114674 3300005331 Bacteria 2323
11 Ga0068868_100052573 3300005338 Bacteria 3207
12 Ga0068868_100371262 3300005338 Bacteria 1229
13 Ga0070689_100006707 3300005340 Bacteria 8002
14 Ga0070689_100028217 3300005340 Bacteria 4240
15 Ga0070687_100008332 3300005343 Bacteria 4384
16 Ga0070692_10242179 3300005345 Unclassified 1076
17 Ga0070668_100063161 3300005347 Bacteria 2870
18 Ga0070669_100006122 3300005353 Bacteria 8684
19 Ga0070675_100001508 3300005354 Bacteria 17197
20 Ga0070675_100042525 3300005354 Bacteria 3713
21 Ga0070675_100056475 3300005354 Bacteria 3236
22 Ga0070675_100063341 3300005354 Bacteria 3057
23 Ga0070674_100017518 3300005356 Bacteria 4509
24 Ga0070673_100098565 3300005364 Bacteria 2403
25 Ga0070688_100003385 3300005365 Bacteria 8189
26 Ga0070688_100300606 3300005365 Bacteria 1160
27 Ga0070659_100265764 3300005366 Unclassified 1424
28 Ga0070667_100127184 3300005367 Bacteria 2221
29 Ga0070667_100313577 3300005367 Unclassified 1414
30 Ga0070714_100050871 3300005435 Bacteria 3531
31 Ga0070701_10184359 3300005438 Bacteria 1224
32 Ga0070700_100062413 3300005441 Bacteria 2354
33 Ga0070700_100271188 3300005441 Bacteria 1226
34 Ga0070700_100289436 3300005441 Bacteria 1191
35 Ga0070663_100124511 3300005455 Bacteria 1951
36 Ga0070678_100006717 3300005456 Bacteria 6775
37 Ga0070662_100065167 3300005457 Bacteria 2670
38 Ga0068867_100021657 3300005459 Bacteria 4588
39 Ga0070699_100011298 3300005518 Bacteria 7715
40 Ga0070684_100278500 3300005535 Bacteria 1532
41 Ga0070697_100324486 3300005536 Bacteria 1326
42 Ga0070672_100016021 3300005543 Bacteria 5357
43 Ga0070672_100081291 3300005543 Bacteria 2598
44 Ga0070686_100087415 3300005544 Bacteria 2078
45 Ga0070704_100004035 3300005549 Bacteria 8479
46 Ga0070664_100034192 3300005564 Bacteria 4263
47 Ga0070664_100183034 3300005564 Unclassified 1863
48 Ga0068852_100530777 3300005616 Unclassified 1175
49 Ga0068859_100003550 3300005617 Bacteria 15886
50 Ga0068859_100013644 3300005617 Bacteria 8146
51 Ga0068859_100364656 3300005617 Bacteria 1540
52 Ga0068859_100652609 3300005617 Unclassified 1144
53 Ga0068864_100023258 3300005618 Bacteria 5203
54 Ga0068861_100009721 3300005719 Bacteria 6650
55 Ga0068861_100016728 3300005719 Bacteria 5195
56 Ga0068870_10001553 3300005840 Bacteria 9334
57 Ga0068870_10091728 3300005840 Unclassified 1700
58 Ga0068863_100009135 3300005841 Bacteria 9681
59 Ga0068858_100023009 3300005842 Bacteria 5811
60 Ga0068858_100491738 3300005842 Bacteria 1185
61 Ga0068860_100006369 3300005843 Bacteria 11849
62 Ga0068860_100751115 3300005843 Bacteria 987
63 Ga0068862_100005217 3300005844 Bacteria 10915
64 Ga0081540_1147894 3300005983 Bacteria 932
65 Ga0075364_10019904 3300006051 Bacteria 4218
66 Ga0075367_10074723 3300006178 Bacteria 2044
67 Ga0075366_10201342 3300006195 Bacteria 1211
68 Ga0097621_100063175 3300006237 Bacteria 3042
69 Ga0097621_100126882 3300006237 Bacteria 2168
70 Ga0097621_100277392 3300006237 Bacteria 1475
71 Ga0068871_100016964 3300006358 Bacteria 5499
72 Ga0068871_100034522 3300006358 Bacteria 4013
73 Ga0068871_100277190 3300006358 Bacteria 1466
74 Ga0075428_100070188 3300006844 Bacteria 3830
75 Ga0075434_100234724 3300006871 Bacteria 1854
76 Ga0075434_100906659 3300006871 Bacteria 896
77 Ga0068865_100044476 3300006881 Bacteria 3040
78 Ga0068865_100044501 3300006881 Bacteria 3039
79 Ga0097620_100003550 3300006931 Bacteria 15886
80 Ga0097620_100013643 3300006931 Bacteria 8146
81 Ga0097620_100364699 3300006931 Bacteria 1540
82 Ga0097620_100652615 3300006931 Unclassified 1144
83 Ga0111539_10001423 3300009094 Bacteria 31879
84 Ga0111539_10003662 3300009094 Bacteria 20240
85 Ga0111539_10005714 3300009094 Bacteria 16085
86 Ga0111539_10211207 3300009094 Bacteria 2261
87 Ga0105245_10257241 3300009098 Bacteria 1698
88 Ga0105247_10203288 3300009101 Bacteria 1332
89 Ga0114129_10000162 3300009147 Bacteria 71781
90 Ga0114129_10227252 3300009147 Bacteria 2515
91 Ga0114129_10539390 3300009147 Bacteria 1519
92 Ga0114129_11145510 3300009147 Bacteria 971
93 Ga0105242_10031538 3300009176 Bacteria 4234
94 Ga0105242_10033615 3300009176 Bacteria 4108
95 Ga0105242_10691471 3300009176 Unclassified 997
96 Ga0105248_10074763 3300009177 Bacteria 3808
97 Ga0105248_10103539 3300009177 Bacteria 3208
98 Ga0105249_10022413 3300009553 Bacteria 5657
99 Ga0105249_10154313 3300009553 Bacteria 2213
100 Ga0157374_10456769 3300013296 Bacteria 1279
101 Ga0157375_10005084 3300013308 Bacteria 11412
102 Ga0157375_10029328 3300013308 Bacteria 5172
103 Ga0163163_10000019 3300014325 Bacteria 199037
104 Ga0163163_10263701 3300014325 Bacteria 1774
105 Ga0157380_10003503 3300014326 Bacteria 10783
106 Ga0157380_10059031 3300014326 Bacteria 3060
107 Ga0157380_10089022 3300014326 Unclassified 2542
108 Ga0207697_10000538 3300025315 Bacteria 21490
109 Ga0207682_10020882 3300025893 Bacteria 2574
110 Ga0207688_10020467 3300025901 Bacteria 3613
111 Ga0207688_10137099 3300025901 Bacteria 1438
112 Ga0207645_10048768 3300025907 Bacteria 2705
113 Ga0207643_10006529 3300025908 Bacteria 6251
114 Ga0207643_10024237 3300025908 Bacteria 3348
115 Ga0207660_10218182 3300025917 Bacteria 1496
116 Ga0207662_10171883 3300025918 Bacteria 1390
117 Ga0207659_10006563 3300025926 Bacteria 7138
118 Ga0207659_10009178 3300025926 Bacteria 6176
119 Ga0207659_10097304 3300025926 Bacteria 2211
120 Ga0207659_10241170 3300025926 Unclassified 1462
121 Ga0207690_10169363 3300025932 Bacteria 1635
122 Ga0207706_10021582 3300025933 Bacteria 5781
123 Ga0207706_10516758 3300025933 Unclassified 1030
124 Ga0207686_10038188 3300025934 Bacteria 2904
125 Ga0207686_10237205 3300025934 Bacteria 1325
126 Ga0207670_10010049 3300025936 Bacteria 5430
127 Ga0207669_10021995 3300025937 Bacteria 3379
128 Ga0207669_10078940 3300025937 Bacteria 2099
129 Ga0207669_10186909 3300025937 Bacteria 1491
130 Ga0207704_10147121 3300025938 Bacteria 1657
131 Ga0207704_10193900 3300025938 Bacteria 1480
132 Ga0207691_10030122 3300025940 Bacteria 5073
133 Ga0207691_10032146 3300025940 Bacteria 4894
134 Ga0207691_10224527 3300025940 Unclassified 1628
135 Ga0207711_10192371 3300025941 Bacteria 1860
136 Ga0207711_10253294 3300025941 Bacteria 1617
137 Ga0207679_10177152 3300025945 Bacteria 1761
138 Ga0207651_10030741 3300025960 Bacteria 3424
139 Ga0207712_10016882 3300025961 Bacteria 4733
140 Ga0207712_10181336 3300025961 Bacteria 1654
141 Ga0207640_10018027 3300025981 Bacteria 4142
142 Ga0207677_10268360 3300026023 Bacteria 1395
143 Ga0207703_10018447 3300026035 Bacteria 5448
144 Ga0207703_10250993 3300026035 Bacteria 1595
145 Ga0207703_10496042 3300026035 Bacteria 1146
146 Ga0207678_10149762 3300026067 Bacteria 1992
147 Ga0207708_10049810 3300026075 Bacteria 3190
148 Ga0207708_10117971 3300026075 Bacteria 2066
149 Ga0207708_10346367 3300026075 Bacteria 1218
150 Ga0207641_10274994 3300026088 Bacteria 1582
151 Ga0207648_10011330 3300026089 Bacteria 8403
152 Ga0207648_10196965 3300026089 Unclassified 1786
153 Ga0207676_10023408 3300026095 Bacteria 4557
154 Ga0207674_10207327 3300026116 Bacteria 1909
155 Ga0207675_100005722 3300026118 Bacteria 11893
156 Ga0207675_100008216 3300026118 Bacteria 9835
157 Ga0207683_10003269 3300026121 Bacteria 14129
158 Ga0207428_10000686 3300027907 Bacteria 39448
159 Ga0207428_10001900 3300027907 Bacteria 21160
160 Ga0207428_10014906 3300027907 Bacteria 6734
161 Ga0207428_10051859 3300027907 Unclassified 3278
162 Ga0268266_10081879 3300028379 Bacteria 2815
163 Ga0268265_10135370 3300028380 Bacteria 2054
164 Ga0268265_10541100 3300028380 Bacteria 1104
165 Ga0268264_10008235 3300028381 Bacteria 8658
166 Ga0268264_10181327 3300028381 Bacteria 1913
167 Ga0307408_100040593 3300031548 Bacteria 3295
168 Ga0307405_10002520 3300031731 Bacteria 8109
169 Ga0307413_10013802 3300031824 Bacteria 4078
170 Ga0307410_10066815 3300031852 Bacteria 2478
171 Ga0307406_10107024 3300031901 Bacteria 1916
172 Ga0307407_10001617 3300031903 Bacteria 8324
173 Ga0307407_10140725 3300031903 Bacteria 1556
174 Ga0307412_10010222 3300031911 Bacteria 5402
175 Ga0307409_100003119 3300031995 Bacteria 8891
176 Ga0307409_100029253 3300031995 Bacteria 3939
177 Ga0307409_100165578 3300031995 Unclassified 1939
178 Ga0307409_100241863 3300031995 Bacteria 1644
179 Ga0307416_100006706 3300032002 Bacteria 7231
180 Ga0307416_100330334 3300032002 Bacteria 1532
181 Ga0307414_10003699 3300032004 Bacteria 8197
182 Ga0307411_10002254 3300032005 Bacteria 8426
183 Ga0307411_10027388 3300032005 Unclassified 3448
184 Ga0307411_10033302 3300032005 Bacteria 3195
185 Ga0373937_0099073 3300036401 Bacteria 2704
186 Ga0451576_0008705 3300045051 Bacteria 11876
187 Ga0451576_0037366 3300045051 Bacteria 5144
188 Ga0495584_0047945 3300046491 Bacteria 2155
189 Ga0495618_0007606 3300046514 Bacteria 6560
190 Ga0495618_0221393 3300046514 Bacteria 1194
191 Ga0495663_0038702 3300046525 Bacteria 1443
192 Ga0495640_0207162 3300046533 Bacteria 1241
193 Ga0495635_0226719 3300046663 Bacteria 1263
194 Ga0495659_0005019 3300046664 Bacteria 4160
195 Ga0495659_0055658 3300046664 Bacteria 1450
196 Ga0495669_0050609 3300046684 Bacteria 1863
197 Ga0495670_0139617 3300046691 Unclassified 1267
198 Ga0495581_0168850 3300047315 Bacteria 1279
199 Ga0495674_0351686 3300047319 Bacteria 1196
200 Ga0495680_0466609 3300047322 Bacteria 862
201 Ga0496104_0003976 3300048907 Bacteria 12799
202 Ga0496105_0023118 3300048908 Bacteria 5041
203 Ga0496114_0005497 3300048917 Bacteria 9921
204 Ga0496114_0585817 3300048917 Unclassified 984
205 Ga0496115_0475761 3300048918 Unclassified 1006
206 Ga0501038_0319823 3300049574 Unclassified 1214
207 Ga0501071_0151705 3300049587 Bacteria 1729
208 Ga0501073_0006000 3300049589 Bacteria 9062
209 Ga0501074_0028488 3300049590 Bacteria 4048
210 Ga0501074_0423109 3300049590 Bacteria 945
211 Ga0501076_0047963 3300049592 Bacteria 3377
212 Ga0501209_037140 3300049656 Bacteria 1270
213 Ga0501081_0043201 3300049743 Bacteria 3091
214 nmdc:mga0k408_365121_c1 3300050493 Unclassified 860
215 nmdc:mga06z11_60059_c1 3300050494 Bacteria 1978
216 nmdc:mga05p37_39306_c1 3300050507 Bacteria 5808
217 nmdc:mga05p37_53_c1 3300050507 Bacteria 102685
218 nmdc:mga09592_184110_c1 3300050508 Bacteria 1807
219 nmdc:mga09592_97099_c1 3300050508 Bacteria 2521
220 nmdc:mga0qj67_89083_c1 3300050509 Bacteria 2478
221 nmdc:mga06r32_512040_c1 3300050510 Unclassified 1176
222 nmdc:mga08y16_14824_c1 3300050511 Bacteria 8196
223 nmdc:mga08y16_19660_c1 3300050511 Bacteria 7122
224 nmdc:mga08y16_693_c1 3300050511 Bacteria 31987
225 nmdc:mga08y16_8937_c1 3300050511 Bacteria 10520
226 nmdc:mga08y16_92593_c1 3300050511 Bacteria 3150
227 nmdc:mga0n895_342116_c1 3300050512 Bacteria 1515
228 nmdc:mga0n895_735860_c1 3300050512 Bacteria 980
229 Ga0495601_0015611 3300053077 Bacteria 4591
230 Ga0495595_0051103 3300053084 Bacteria 1915
231 Ga0500651_0055754 3300053093 Bacteria 2475
232 Ga0500555_000744 3300053103 Bacteria 11985
233 Ga0500556_0005367 3300053104 Bacteria 3621
234 Ga0500616_0000178 3300053153 Bacteria 106208
235 Ga0500645_000595 3300053730 Bacteria 23294
236 Ga0500599_004467 3300053736 Bacteria 1733
237 Ga0070698_100106709
238 MBSR1b_contig_13592692
239 rootH1_10404260
240 Ga0065712_10077462
241 Ga0065715_10095957
242 Ga0065715_10149758
243 Ga0070676_10065924
244 Ga0070690_100077955
245 Ga0070690_100084628
246 Ga0070670_100114674
247 Ga0068868_100052573
248 Ga0068868_100371262
249 Ga0070689_100006707
250 Ga0070689_100028217
251 Ga0070687_100008332
252 Ga0070692_10242179
253 Ga0070668_100063161
254 Ga0070669_100006122
255 Ga0070675_100001508
256 Ga0070675_100042525
257 Ga0070675_100056475
258 Ga0070675_100063341
259 Ga0070674_100017518
260 Ga0070673_100098565
261 Ga0070688_100003385
262 Ga0070688_100300606
263 Ga0070659_100265764
264 Ga0070667_100127184
265 Ga0070667_100313577
266 Ga0070714_100050871
267 Ga0070701_10184359
268 Ga0070700_100062413
269 Ga0070700_100271188
270 Ga0070700_100289436
271 Ga0070663_100124511
272 Ga0070678_100006717
273 Ga0070662_100065167
274 Ga0068867_100021657
275 Ga0070699_100011298
276 Ga0070684_100278500
277 Ga0070697_100324486
278 Ga0070672_100016021
279 Ga0070672_100081291
280 Ga0070686_100087415
281 Ga0070704_100004035
282 Ga0070664_100034192
283 Ga0070664_100183034
284 Ga0068852_100530777
285 Ga0068859_100003550
286 Ga0068859_100013644
287 Ga0068859_100364656
288 Ga0068859_100652609
289 Ga0068864_100023258
290 Ga0068861_100009721
291 Ga0068861_100016728
292 Ga0068870_10001553
293 Ga0068870_10091728
294 Ga0068863_100009135
295 Ga0068858_100023009
296 Ga0068858_100491738
297 Ga0068860_100006369
298 Ga0068860_100751115
299 Ga0068862_100005217
300 Ga0081540_1147894
301 Ga0075364_10019904
302 Ga0075367_10074723
303 Ga0075366_10201342
304 Ga0097621_100063175
305 Ga0097621_100126882
306 Ga0097621_100277392
307 Ga0068871_100016964
308 Ga0068871_100034522
309 Ga0068871_100277190
310 Ga0075428_100070188
311 Ga0075434_100234724
312 Ga0075434_100906659
313 Ga0068865_100044476
314 Ga0068865_100044501
315 Ga0097620_100003550
316 Ga0097620_100013643
317 Ga0097620_100364699
318 Ga0097620_100652615
319 Ga0111539_10001423
320 Ga0111539_10003662
321 Ga0111539_10005714
322 Ga0111539_10211207
323 Ga0105245_10257241
324 Ga0105247_10203288
325 Ga0114129_10000162
326 Ga0114129_10227252
327 Ga0114129_10539390
328 Ga0114129_11145510
329 Ga0105242_10031538
330 Ga0105242_10033615
331 Ga0105242_10691471
332 Ga0105248_10074763
333 Ga0105248_10103539
334 Ga0105249_10022413
335 Ga0105249_10154313
336 Ga0157374_10456769
337 Ga0157375_10005084
338 Ga0157375_10029328
339 Ga0163163_10000019
340 Ga0163163_10263701
341 Ga0157380_10003503
342 Ga0157380_10059031
343 Ga0157380_10089022
344 Ga0207697_10000538
345 Ga0207682_10020882
346 Ga0207688_10020467
347 Ga0207688_10137099
348 Ga0207645_10048768
349 Ga0207643_10006529
350 Ga0207643_10024237
351 Ga0207660_10218182
352 Ga0207662_10171883
353 Ga0207659_10006563
354 Ga0207659_10009178
355 Ga0207659_10097304
356 Ga0207659_10241170
357 Ga0207690_10169363
358 Ga0207706_10021582
359 Ga0207706_10516758
360 Ga0207686_10038188
361 Ga0207686_10237205
362 Ga0207670_10010049
363 Ga0207669_10021995
364 Ga0207669_10078940
365 Ga0207669_10186909
366 Ga0207704_10147121
367 Ga0207704_10193900
368 Ga0207691_10030122
369 Ga0207691_10032146
370 Ga0207691_10224527
371 Ga0207711_10192371
372 Ga0207711_10253294
373 Ga0207679_10177152
374 Ga0207651_10030741
375 Ga0207712_10016882
376 Ga0207712_10181336
377 Ga0207640_10018027
378 Ga0207677_10268360
379 Ga0207703_10018447
380 Ga0207703_10250993
381 Ga0207703_10496042
382 Ga0207678_10149762
383 Ga0207708_10049810
384 Ga0207708_10117971
385 Ga0207708_10346367
386 Ga0207641_10274994
387 Ga0207648_10011330
388 Ga0207648_10196965
389 Ga0207676_10023408
390 Ga0207674_10207327
391 Ga0207675_100005722
392 Ga0207675_100008216
393 Ga0207683_10003269
394 Ga0207428_10000686
395 Ga0207428_10001900
396 Ga0207428_10014906
397 Ga0207428_10051859
398 Ga0268266_10081879
399 Ga0268265_10135370
400 Ga0268265_10541100
401 Ga0268264_10008235
402 Ga0268264_10181327
403 Ga0307408_100040593
404 Ga0307405_10002520
405 Ga0307413_10013802
406 Ga0307410_10066815
407 Ga0307406_10107024
408 Ga0307407_10001617
409 Ga0307407_10140725
410 Ga0307412_10010222
411 Ga0307409_100003119
412 Ga0307409_100029253
413 Ga0307409_100165578
414 Ga0307409_100241863
415 Ga0307416_100006706
416 Ga0307416_100330334
417 Ga0307414_10003699
418 Ga0307411_10002254
419 Ga0307411_10027388
420 Ga0307411_10033302
421 Ga0373937_0099073
422 Ga0451576_0008705
423 Ga0451576_0037366
424 Ga0495584_0047945
425 Ga0495618_0007606
426 Ga0495618_0221393
427 Ga0495663_0038702
428 Ga0495640_0207162
429 Ga0495635_0226719
430 Ga0495659_0005019
431 Ga0495659_0055658
432 Ga0495669_0050609
433 Ga0495670_0139617
434 Ga0495581_0168850
435 Ga0495674_0351686
436 Ga0495680_0466609
437 Ga0496104_0003976
438 Ga0496105_0023118
439 Ga0496114_0005497
440 Ga0496114_0585817
441 Ga0496115_0475761
442 Ga0501038_0319823
443 Ga0501071_0151705
444 Ga0501073_0006000
445 Ga0501074_0028488
446 Ga0501074_0423109
447 Ga0501076_0047963
448 Ga0501209_037140
449 Ga0501081_0043201
450 nmdc:mga0k408_365121_c1
451 nmdc:mga06z11_60059_c1
452 nmdc:mga05p37_39306_c1
453 nmdc:mga05p37_53_c1
454 nmdc:mga09592_184110_c1
455 nmdc:mga09592_97099_c1
456 nmdc:mga0qj67_89083_c1
457 nmdc:mga06r32_512040_c1
458 nmdc:mga08y16_14824_c1
459 nmdc:mga08y16_19660_c1
460 nmdc:mga08y16_693_c1
461 nmdc:mga08y16_8937_c1
462 nmdc:mga08y16_92593_c1
463 nmdc:mga0n895_342116_c1
464 nmdc:mga0n895_735860_c1
465 Ga0495601_0015611
466 Ga0495595_0051103
467 Ga0500651_0055754
468 Ga0500555_000744
469 Ga0500556_0005367
470 Ga0500616_0000178
471 Ga0500645_000595
472 Ga0500599_004467

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01061

ABC2_membrane

ABC-2 type transporter

50

257

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
8dku-assembly1.cif.gz_B cryoem structure of the a. aeolicus wzmwzt transporter bound to the native o antigen 0.8997 21 267
7k2t-assembly1.cif.gz_B mg2+/atp-bound structure of the full-length wzmwzt o antigen abc transporter in lipid nanodiscs 0.8834 21 264
8dku-assembly1.cif.gz_B cryoem structure of the a. aeolicus wzmwzt transporter bound to the native o antigen 0.87 21 267
6m96-assembly1.cif.gz_B-2 atp-bound conformation of the wzmwzt o antigen abc transporter 0.8676 21 265
6jbh-assembly1.cif.gz_D cryo-em structure and transport mechanism of a wall teichoic acid abc transporter 0.8637 9 254
ID Description Score Start End Superfamily
af_Q86P18_394_773_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.7363 72 254 3.40.1710.10
af_A0A2R8QMX4_332_689_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.6595 51 260 3.40.1710.10
af_Q9VMM9_322_706_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.5782 51 261 3.40.1710.10
af_A0A2R8QMX4_332_689_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.5374 51 260 3.40.1710.10
af_Q86P18_394_773_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.5296 72 254 3.40.1710.10
ID Description Score Start End GO Terms
AF-A0A143PQI8-F1-model_v4 Transport permease protein 0.9656 6 267 GO:0015920
GO:0043190
GO:0140359
AF-A0A2V8HDN7-F1-model_v4 Transport permease protein 0.9652 6 267 GO:0005886
GO:0015920
GO:0140359
AF-A0A534HY88-F1-model_v4 Transport permease protein 0.9648 6 267 GO:0005886
GO:0015920
GO:0140359
AF-A0A7Y4SSV0-F1-model_v4 Transport permease protein 0.9609 27 267 GO:0005886
GO:0015920
GO:0140359
AF-A0A1G1J8P9-F1-model_v4 Transport permease protein 0.9586 19 267 GO:0005886
GO:0015920
GO:0140359

Map