F348369
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 235 | 157 | 470 | 316 |
Family's Representative Sequence
| Representative Sequence | 3300042876|Ga0451577_0024218|Ga0451577_0024218_2899_3978 |
| Length | 359 |
| Sequence | MICALQVSVLAAGSIRTPNETNRRLGPRRGLCSIAGSLVYEGIPMTRHQRILVTGGAGFLGSHLCERLINEGHEVVCLDNFFTGMRARVEHLLPHPHFELARHDVEQPLTMEVDQIFHLACPASPVHYQRNPVRTIRTAVQGTLNLLEVARESGARIMIASTSEVYGDPAEHPQRETYWGHVNPIGPRACYDEGKRCAEALAISYARQYDVDVRIARIFNTYGPRMHPNDGRVVSNFVVQALAGQPLTVFGDGKQTRSFCYVSDTIEGFLRLMASPHGCDPVNLGNPRETSMLELATMISEMAGSKAEVVHVALPKDDPVRRMPDISLAQKLLNGWTPQVSLERGLEATIAYFRKLASR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 2 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 3 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 6 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 8 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 9 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 11 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 12 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 13 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 15 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 17 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 18 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 20 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 21 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 22 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 23 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 24 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 25 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 26 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 27 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 29 | 3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 30 | 3300021377 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 | Metagenome | Unclassified |
| 31 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 32 | 3300022734 | Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU3 | Metagenome | Rhizosphere |
| 33 | 3300024225 | Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 | Metagenome | Rhizosphere |
| 34 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 35 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 36 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300028036 | Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 | Metagenome | Rhizosphere |
| 49 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 50 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 51 | 3300030760 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 52 | 3300030878 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 53 | 3300031090 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 54 | 3300031235 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG | Metagenome | Rhizosphere |
| 55 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 56 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 57 | 3300031242 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG | Metagenome | Rhizosphere |
| 58 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 59 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 60 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 61 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 62 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 63 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 64 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 65 | 3300034818 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 | Metagenome | Rhizosphere |
| 66 | 3300035083 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 | Metagenome | Rhizosphere |
| 67 | 3300035111 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 68 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 69 | 3300035116 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 | Metagenome | Rhizosphere |
| 70 | 3300035117 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 | Metagenome | Rhizosphere |
| 71 | 3300035120 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 | Metagenome | Rhizosphere |
| 72 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 73 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 74 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 75 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 76 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 77 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 78 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 79 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 80 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 81 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 82 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 83 | 3300041511 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG | Metagenome | Unclassified |
| 84 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 85 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 86 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 87 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 88 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 89 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 90 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 91 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 92 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 93 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 94 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 95 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 96 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046461 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 122 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 123 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 124 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 125 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 126 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 127 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 128 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 129 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 130 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 131 | 3300049521 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought | Metagenome | Rhizosphere |
| 132 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 133 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 134 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 135 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 136 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 137 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 138 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 139 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 140 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 141 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 142 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 143 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 144 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 145 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 146 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 147 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 148 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 149 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 150 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 151 | 3300053102 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere | Metagenome | Endosphere |
| 152 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 153 | 3300059492 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 14R_AD_T1_R2 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 154 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 155 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 156 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 157 | 2858688981 | Cupriavidus sp. UYMMa02A | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 97.45 |
| Metatranscriptomes | 2.13 |
| Isolates | 0.43 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.7 |
| Nodule | 0 |
| Rhizoplane | 4.68 |
| Rhizosphere | 89.36 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 1.7 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0451577_0024218 | 3300042876 | Bacteria | 5524 |
| 2 | rootH2_10162493 | 3300003320 | Bacteria | 1509 |
| 3 | Ga0070675_100133764 | 3300005354 | Bacteria | 2115 |
| 4 | Ga0070667_100000250 | 3300005367 | Bacteria | 61119 |
| 5 | Ga0070667_100020537 | 3300005367 | Bacteria | 5484 |
| 6 | Ga0070709_10022344 | 3300005434 | Bacteria | 3698 |
| 7 | Ga0070709_10234483 | 3300005434 | Bacteria | 1315 |
| 8 | Ga0070714_100000861 | 3300005435 | Bacteria | 21507 |
| 9 | Ga0070714_100236914 | 3300005435 | Bacteria | 1683 |
| 10 | Ga0070713_100183305 | 3300005436 | Bacteria | 1882 |
| 11 | Ga0070710_10007389 | 3300005437 | Bacteria | 5319 |
| 12 | Ga0070708_100064488 | 3300005445 | Bacteria | 3282 |
| 13 | Ga0070706_100049855 | 3300005467 | Bacteria | 3863 |
| 14 | Ga0070706_100078903 | 3300005467 | Bacteria | 3047 |
| 15 | Ga0070707_100061484 | 3300005468 | Bacteria | 3602 |
| 16 | Ga0070698_100013684 | 3300005471 | Bacteria | 8590 |
| 17 | Ga0070698_100126455 | 3300005471 | Bacteria | 2513 |
| 18 | Ga0070699_100008441 | 3300005518 | Bacteria | 8926 |
| 19 | Ga0070697_100002623 | 3300005536 | Bacteria | 13835 |
| 20 | Ga0070693_100038127 | 3300005547 | Bacteria | 2684 |
| 21 | Ga0068859_100564614 | 3300005617 | Bacteria | 1232 |
| 22 | Ga0081539_10036883 | 3300005985 | Bacteria | 2918 |
| 23 | Ga0070717_10017641 | 3300006028 | Bacteria | 5558 |
| 24 | Ga0070717_10065295 | 3300006028 | Bacteria | 3025 |
| 25 | Ga0070717_10100714 | 3300006028 | Bacteria | 2453 |
| 26 | Ga0070717_10139701 | 3300006028 | Bacteria | 2089 |
| 27 | Ga0075365_10074055 | 3300006038 | Bacteria | 2296 |
| 28 | Ga0070712_100000172 | 3300006175 | Bacteria | 35623 |
| 29 | Ga0075428_100061534 | 3300006844 | Bacteria | 4111 |
| 30 | Ga0075436_100007618 | 3300006914 | Bacteria | 7396 |
| 31 | Ga0075436_100011362 | 3300006914 | Bacteria | 6112 |
| 32 | Ga0075436_100108288 | 3300006914 | Bacteria | 1938 |
| 33 | Ga0097620_100564551 | 3300006931 | Bacteria | 1232 |
| 34 | Ga0105240_10020510 | 3300009093 | Bacteria | 8812 |
| 35 | Ga0105240_10267661 | 3300009093 | Bacteria | 1969 |
| 36 | Ga0105240_10282931 | 3300009093 | Bacteria | 1904 |
| 37 | Ga0111539_10422428 | 3300009094 | Bacteria | 1553 |
| 38 | Ga0114129_10220462 | 3300009147 | Bacteria | 2559 |
| 39 | Ga0105248_10296154 | 3300009177 | Bacteria | 1822 |
| 40 | Ga0157370_10197036 | 3300013104 | Bacteria | 1869 |
| 41 | Ga0206356_11086724 | 3300020070 | Bacteria | 2086 |
| 42 | Ga0213874_10001776 | 3300021377 | Bacteria | 4530 |
| 43 | Ga0213875_10111051 | 3300021388 | Bacteria | 1280 |
| 44 | Ga0224571_100286 | 3300022734 | Bacteria | 2595 |
| 45 | Ga0224572_1003492 | 3300024225 | Bacteria | 2655 |
| 46 | Ga0209437_102718 | 3300025233 | Bacteria | 3347 |
| 47 | Ga0209233_1025765 | 3300025261 | Bacteria | 1450 |
| 48 | Ga0207692_10002457 | 3300025898 | Bacteria | 7113 |
| 49 | Ga0207692_10021164 | 3300025898 | Bacteria | 2972 |
| 50 | Ga0207699_10007314 | 3300025906 | Bacteria | 5394 |
| 51 | Ga0207684_10002107 | 3300025910 | Bacteria | 20398 |
| 52 | Ga0207684_10006517 | 3300025910 | Bacteria | 10635 |
| 53 | Ga0207684_10141678 | 3300025910 | Bacteria | 2067 |
| 54 | Ga0207684_10147815 | 3300025910 | Bacteria | 2021 |
| 55 | Ga0207707_10460467 | 3300025912 | Bacteria | 1087 |
| 56 | Ga0207693_10011035 | 3300025915 | Bacteria | 7321 |
| 57 | Ga0207663_10001412 | 3300025916 | Bacteria | 11139 |
| 58 | Ga0207646_10007206 | 3300025922 | Bacteria | 11349 |
| 59 | Ga0207659_10185875 | 3300025926 | Bacteria | 1650 |
| 60 | Ga0207700_10070893 | 3300025928 | Bacteria | 2681 |
| 61 | Ga0207700_10154508 | 3300025928 | Bacteria | 1900 |
| 62 | Ga0207664_10000179 | 3300025929 | Bacteria | 49014 |
| 63 | Ga0207664_10019326 | 3300025929 | Bacteria | 5033 |
| 64 | Ga0207658_10000152 | 3300025986 | Bacteria | 72257 |
| 65 | Ga0207676_10155863 | 3300026095 | Bacteria | 1973 |
| 66 | Ga0265355_1000661 | 3300028036 | Bacteria | 1927 |
| 67 | Ga0265323_10001723 | 3300028653 | Bacteria | 10394 |
| 68 | Ga0265323_10009616 | 3300028653 | Bacteria | 3941 |
| 69 | Ga0265323_10019137 | 3300028653 | Bacteria | 2644 |
| 70 | Ga0265324_10000025 | 3300029957 | Bacteria | 161982 |
| 71 | Ga0265762_1000098 | 3300030760 | Bacteria | 12376 |
| 72 | Ga0265770_1009177 | 3300030878 | Bacteria | 1422 |
| 73 | Ga0265760_10044820 | 3300031090 | Bacteria | 1324 |
| 74 | Ga0265330_10000388 | 3300031235 | Bacteria | 30400 |
| 75 | Ga0265330_10001373 | 3300031235 | Bacteria | 14221 |
| 76 | Ga0265330_10002677 | 3300031235 | Bacteria | 9625 |
| 77 | Ga0265330_10002831 | 3300031235 | Bacteria | 9290 |
| 78 | Ga0265330_10004547 | 3300031235 | Bacteria | 7024 |
| 79 | Ga0265320_10026387 | 3300031240 | Bacteria | 3042 |
| 80 | Ga0265325_10001684 | 3300031241 | Bacteria | 15350 |
| 81 | Ga0265325_10087747 | 3300031241 | Bacteria | 1537 |
| 82 | Ga0265329_10000211 | 3300031242 | Bacteria | 30333 |
| 83 | Ga0265329_10000237 | 3300031242 | Bacteria | 29379 |
| 84 | Ga0265329_10015756 | 3300031242 | Bacteria | 2634 |
| 85 | Ga0265339_10000014 | 3300031249 | Bacteria | 187463 |
| 86 | Ga0265339_10001897 | 3300031249 | Bacteria | 15341 |
| 87 | Ga0265339_10016272 | 3300031249 | Bacteria | 4437 |
| 88 | Ga0265316_10000068 | 3300031344 | Bacteria | 108687 |
| 89 | Ga0265316_10000693 | 3300031344 | Bacteria | 37504 |
| 90 | Ga0265316_10000806 | 3300031344 | Bacteria | 34583 |
| 91 | Ga0265316_10005781 | 3300031344 | Bacteria | 11939 |
| 92 | Ga0265316_10014393 | 3300031344 | Bacteria | 6965 |
| 93 | Ga0265316_10032352 | 3300031344 | Bacteria | 4268 |
| 94 | Ga0265316_10082882 | 3300031344 | Bacteria | 2457 |
| 95 | Ga0265313_10002645 | 3300031595 | Bacteria | 15229 |
| 96 | Ga0265314_10000080 | 3300031711 | Bacteria | 144008 |
| 97 | Ga0265314_10006672 | 3300031711 | Bacteria | 10143 |
| 98 | Ga0265342_10000373 | 3300031712 | Bacteria | 49369 |
| 99 | Ga0265342_10000378 | 3300031712 | Bacteria | 49176 |
| 100 | Ga0265342_10001576 | 3300031712 | Bacteria | 21055 |
| 101 | Ga0316578_10074801 | 3300031728 | Bacteria | 2009 |
| 102 | Ga0307416_100012837 | 3300032002 | Bacteria | 5666 |
| 103 | Ga0373950_0000009 | 3300034818 | Bacteria | 379994 |
| 104 | Ga0373950_0000027 | 3300034818 | Bacteria | 172704 |
| 105 | Ga0373926_0010609 | 3300035083 | Unclassified | 3089 |
| 106 | Ga0373923_0002378 | 3300035111 | Bacteria | 5778 |
| 107 | Ga0373936_0008926 | 3300035113 | Bacteria | 3778 |
| 108 | Ga0373936_0022177 | 3300035113 | Unclassified | 2473 |
| 109 | Ga0373945_0001741 | 3300035116 | Bacteria | 6719 |
| 110 | Ga0373953_0087308 | 3300035117 | Bacteria | 1302 |
| 111 | Ga0373957_0020061 | 3300035120 | Bacteria | 2359 |
| 112 | Ga0373957_0042911 | 3300035120 | Bacteria | 1707 |
| 113 | Ga0373943_0000158 | 3300035170 | Bacteria | 26526 |
| 114 | Ga0373955_0016040 | 3300035172 | Bacteria | 3681 |
| 115 | Ga0373955_0131053 | 3300035172 | Bacteria | 1463 |
| 116 | Ga0373935_0006108 | 3300035692 | Bacteria | 7163 |
| 117 | Ga0373935_0142284 | 3300035692 | Bacteria | 1621 |
| 118 | Ga0373927_0000396 | 3300035695 | Bacteria | 33781 |
| 119 | Ga0373927_0186119 | 3300035695 | Bacteria | 1362 |
| 120 | Ga0373933_0000595 | 3300035724 | Bacteria | 22662 |
| 121 | Ga0373933_0048689 | 3300035724 | Bacteria | 2524 |
| 122 | Ga0373933_0050748 | 3300035724 | Bacteria | 2478 |
| 123 | Ga0373947_0000417 | 3300035725 | Bacteria | 24181 |
| 124 | Ga0373947_0343732 | 3300035725 | Bacteria | 1000 |
| 125 | Ga0373937_0005133 | 3300036401 | Bacteria | 11161 |
| 126 | Ga0373937_0022525 | 3300036401 | Bacteria | 5665 |
| 127 | Ga0373937_0359230 | 3300036401 | Bacteria | 1380 |
| 128 | Ga0316584_0248808 | 3300036712 | Bacteria | 1299 |
| 129 | Ga0373925_0002007 | 3300037068 | Bacteria | 16868 |
| 130 | Ga0373925_0007716 | 3300037068 | Bacteria | 7840 |
| 131 | Ga0436364_1557433 | 3300037853 | Bacteria | 2308 |
| 132 | Ga0436363_0919101 | 3300039450 | Bacteria | 21832 |
| 133 | Ga0451855_0501858 | 3300041511 | Eukaryota | 1039 |
| 134 | Ga0451855_1564577 | 3300041511 | Eukaryota | 1235 |
| 135 | Ga0453683_0121702 | 3300044673 | Bacteria | 1643 |
| 136 | Ga0466965_0019987 | 3300044683 | Bacteria | 3217 |
| 137 | Ga0466961_0017997 | 3300044693 | Bacteria | 4543 |
| 138 | Ga0466961_0153629 | 3300044693 | Bacteria | 1436 |
| 139 | Ga0466961_0228585 | 3300044693 | Bacteria | 1145 |
| 140 | Ga0466963_0028637 | 3300044694 | Bacteria | 3579 |
| 141 | Ga0466963_0084607 | 3300044694 | Bacteria | 2152 |
| 142 | Ga0466963_0171130 | 3300044694 | Bacteria | 1514 |
| 143 | Ga0453684_0000011 | 3300044712 | Bacteria | 1108399 |
| 144 | Ga0453684_0000248 | 3300044712 | Bacteria | 232277 |
| 145 | Ga0453684_0002628 | 3300044712 | Bacteria | 42925 |
| 146 | Ga0453684_0129461 | 3300044712 | Bacteria | 3031 |
| 147 | Ga0453684_0621109 | 3300044712 | Bacteria | 1182 |
| 148 | Ga0466971_0010163 | 3300044719 | Bacteria | 4109 |
| 149 | Ga0466970_0019470 | 3300044765 | Bacteria | 3519 |
| 150 | Ga0466970_0026183 | 3300044765 | Bacteria | 3057 |
| 151 | Ga0466970_0035894 | 3300044765 | Bacteria | 2625 |
| 152 | Ga0466960_0047056 | 3300044901 | Bacteria | 2067 |
| 153 | Ga0466959_0014031 | 3300045049 | Bacteria | 5816 |
| 154 | Ga0466959_0052417 | 3300045049 | Bacteria | 2988 |
| 155 | Ga0466959_0052862 | 3300045049 | Bacteria | 2973 |
| 156 | Ga0451576_0040579 | 3300045051 | Bacteria | 4925 |
| 157 | Ga0451576_0251915 | 3300045051 | Bacteria | 1845 |
| 158 | Ga0466958_0002671 | 3300045836 | Bacteria | 9026 |
| 159 | Ga0466958_0070418 | 3300045836 | Bacteria | 2140 |
| 160 | Ga0466958_0092387 | 3300045836 | Bacteria | 1873 |
| 161 | Ga0466958_0154869 | 3300045836 | Bacteria | 1446 |
| 162 | Ga0466967_0001038 | 3300045976 | Bacteria | 15242 |
| 163 | Ga0495592_0006144 | 3300046454 | Bacteria | 8934 |
| 164 | Ga0495641_0036374 | 3300046461 | Bacteria | 2314 |
| 165 | Ga0495664_0006968 | 3300046477 | Bacteria | 6261 |
| 166 | Ga0495608_0007049 | 3300046511 | Bacteria | 7956 |
| 167 | Ga0495630_0037554 | 3300046517 | Bacteria | 3622 |
| 168 | Ga0495652_0079206 | 3300046529 | Bacteria | 2717 |
| 169 | Ga0495640_0058773 | 3300046533 | Bacteria | 2621 |
| 170 | Ga0495587_0006633 | 3300046536 | Bacteria | 7540 |
| 171 | Ga0495667_0001992 | 3300046559 | Bacteria | 13531 |
| 172 | Ga0495635_0008916 | 3300046663 | Bacteria | 7000 |
| 173 | Ga0495657_0003376 | 3300046675 | Bacteria | 13056 |
| 174 | Ga0495599_0023229 | 3300046678 | Bacteria | 3875 |
| 175 | Ga0495646_0005153 | 3300046680 | Bacteria | 8247 |
| 176 | Ga0495658_0090784 | 3300046683 | Bacteria | 1809 |
| 177 | Ga0495658_0153751 | 3300046683 | Bacteria | 1415 |
| 178 | Ga0495613_0097355 | 3300046689 | Bacteria | 2127 |
| 179 | Ga0495600_0020787 | 3300046809 | Bacteria | 4200 |
| 180 | Ga0495604_0011014 | 3300047317 | Bacteria | 7178 |
| 181 | Ga0495674_0007224 | 3300047319 | Bacteria | 10624 |
| 182 | Ga0495674_0016849 | 3300047319 | Bacteria | 6815 |
| 183 | Ga0495672_0008935 | 3300047320 | Bacteria | 7317 |
| 184 | Ga0495680_0018629 | 3300047322 | Bacteria | 5884 |
| 185 | Ga0495675_0029673 | 3300047444 | Bacteria | 3489 |
| 186 | Ga0495684_0013682 | 3300047471 | Bacteria | 6248 |
| 187 | Ga0495686_0059875 | 3300047472 | Bacteria | 2369 |
| 188 | Ga0495602_0024138 | 3300048088 | Bacteria | 5903 |
| 189 | Ga0495614_0035876 | 3300048089 | Bacteria | 2130 |
| 190 | Ga0496100_0014044 | 3300048903 | Bacteria | 4640 |
| 191 | Ga0496101_0000699 | 3300048904 | Bacteria | 20164 |
| 192 | Ga0496104_0176753 | 3300048907 | Unclassified | 2045 |
| 193 | Ga0496109_0022515 | 3300048912 | Bacteria | 5582 |
| 194 | Ga0496112_0007538 | 3300048915 | Bacteria | 9662 |
| 195 | Ga0496113_0018895 | 3300048916 | Unclassified | 4810 |
| 196 | Ga0496113_0243399 | 3300048916 | Bacteria | 1435 |
| 197 | Ga0496114_0469099 | 3300048917 | Bacteria | 1114 |
| 198 | Ga0496115_0118626 | 3300048918 | Bacteria | 2176 |
| 199 | Ga0496115_0162183 | 3300048918 | Bacteria | 1848 |
| 200 | Ga0496115_0233814 | 3300048918 | Bacteria | 1515 |
| 201 | Ga0496124_0068819 | 3300048927 | Bacteria | 2941 |
| 202 | Ga0496126_0000260 | 3300048929 | Bacteria | 112573 |
| 203 | Ga0501298_004622 | 3300049521 | Bacteria | 2177 |
| 204 | Ga0501033_0003464 | 3300049570 | Bacteria | 12954 |
| 205 | Ga0501034_0000630 | 3300049571 | Bacteria | 54662 |
| 206 | Ga0501034_0031594 | 3300049571 | Bacteria | 5379 |
| 207 | Ga0501036_0190970 | 3300049572 | Bacteria | 1723 |
| 208 | Ga0501038_0125011 | 3300049574 | Bacteria | 2117 |
| 209 | Ga0501043_0004611 | 3300049579 | Bacteria | 11181 |
| 210 | Ga0501046_0003144 | 3300049580 | Bacteria | 15248 |
| 211 | Ga0501047_0000011 | 3300049581 | Bacteria | 409778 |
| 212 | Ga0501047_0115717 | 3300049581 | Bacteria | 2563 |
| 213 | Ga0501048_0001652 | 3300049582 | Bacteria | 16986 |
| 214 | Ga0501067_0000014 | 3300049583 | Bacteria | 110569 |
| 215 | Ga0501070_0018616 | 3300049586 | Bacteria | 5825 |
| 216 | Ga0501072_0000030 | 3300049588 | Bacteria | 133181 |
| 217 | Ga0501073_0000375 | 3300049589 | Bacteria | 30104 |
| 218 | Ga0501073_0002054 | 3300049589 | Bacteria | 15042 |
| 219 | Ga0501073_0004328 | 3300049589 | Bacteria | 10658 |
| 220 | Ga0501079_0000150 | 3300049741 | Bacteria | 37871 |
| 221 | Ga0501080_0004508 | 3300049742 | Bacteria | 12413 |
| 222 | Ga0501080_0362865 | 3300049742 | Bacteria | 1307 |
| 223 | Ga0501083_0010206 | 3300049744 | Bacteria | 6618 |
| 224 | Ga0501035_0019299 | 3300049822 | Bacteria | 6274 |
| 225 | Ga0501044_0020627 | 3300049823 | Bacteria | 7037 |
| 226 | nmdc:mga08x19_190847_c1 | 3300050514 | Bacteria | 1402 |
| 227 | Ga0495612_0169027 | 3300053078 | Bacteria | 957 |
| 228 | Ga0500554_003210 | 3300053102 | Bacteria | 3316 |
| 229 | Ga0501084_0000004 | 3300054114 | Bacteria | 267128 |
| 230 | Ga0501084_0032389 | 3300054114 | Bacteria | 4373 |
| 231 | Ga0587073_0024598 | 3300059492 | Bacteria | 1190 |
| 232 | Ga0501082_0003715 | 3300060353 | Bacteria | 13337 |
| 233 | Ga0466962_0008688 | 3300061719 | Bacteria | 4871 |
| 234 | Ga0530510_0002898 | 3300061734 | Bacteria | 11760 |
| 235 | 2858689739 | 2858688981 | Bacteria | 8184122 |
| 236 | Ga0451577_0024218 | |||
| 237 | rootH2_10162493 | |||
| 238 | Ga0070675_100133764 | |||
| 239 | Ga0070667_100000250 | |||
| 240 | Ga0070667_100020537 | |||
| 241 | Ga0070709_10022344 | |||
| 242 | Ga0070709_10234483 | |||
| 243 | Ga0070714_100000861 | |||
| 244 | Ga0070714_100236914 | |||
| 245 | Ga0070713_100183305 | |||
| 246 | Ga0070710_10007389 | |||
| 247 | Ga0070708_100064488 | |||
| 248 | Ga0070706_100049855 | |||
| 249 | Ga0070706_100078903 | |||
| 250 | Ga0070707_100061484 | |||
| 251 | Ga0070698_100013684 | |||
| 252 | Ga0070698_100126455 | |||
| 253 | Ga0070699_100008441 | |||
| 254 | Ga0070697_100002623 | |||
| 255 | Ga0070693_100038127 | |||
| 256 | Ga0068859_100564614 | |||
| 257 | Ga0081539_10036883 | |||
| 258 | Ga0070717_10017641 | |||
| 259 | Ga0070717_10065295 | |||
| 260 | Ga0070717_10100714 | |||
| 261 | Ga0070717_10139701 | |||
| 262 | Ga0075365_10074055 | |||
| 263 | Ga0070712_100000172 | |||
| 264 | Ga0075428_100061534 | |||
| 265 | Ga0075436_100007618 | |||
| 266 | Ga0075436_100011362 | |||
| 267 | Ga0075436_100108288 | |||
| 268 | Ga0097620_100564551 | |||
| 269 | Ga0105240_10020510 | |||
| 270 | Ga0105240_10267661 | |||
| 271 | Ga0105240_10282931 | |||
| 272 | Ga0111539_10422428 | |||
| 273 | Ga0114129_10220462 | |||
| 274 | Ga0105248_10296154 | |||
| 275 | Ga0157370_10197036 | |||
| 276 | Ga0206356_11086724 | |||
| 277 | Ga0213874_10001776 | |||
| 278 | Ga0213875_10111051 | |||
| 279 | Ga0224571_100286 | |||
| 280 | Ga0224572_1003492 | |||
| 281 | Ga0209437_102718 | |||
| 282 | Ga0209233_1025765 | |||
| 283 | Ga0207692_10002457 | |||
| 284 | Ga0207692_10021164 | |||
| 285 | Ga0207699_10007314 | |||
| 286 | Ga0207684_10002107 | |||
| 287 | Ga0207684_10006517 | |||
| 288 | Ga0207684_10141678 | |||
| 289 | Ga0207684_10147815 | |||
| 290 | Ga0207707_10460467 | |||
| 291 | Ga0207693_10011035 | |||
| 292 | Ga0207663_10001412 | |||
| 293 | Ga0207646_10007206 | |||
| 294 | Ga0207659_10185875 | |||
| 295 | Ga0207700_10070893 | |||
| 296 | Ga0207700_10154508 | |||
| 297 | Ga0207664_10000179 | |||
| 298 | Ga0207664_10019326 | |||
| 299 | Ga0207658_10000152 | |||
| 300 | Ga0207676_10155863 | |||
| 301 | Ga0265355_1000661 | |||
| 302 | Ga0265323_10001723 | |||
| 303 | Ga0265323_10009616 | |||
| 304 | Ga0265323_10019137 | |||
| 305 | Ga0265324_10000025 | |||
| 306 | Ga0265762_1000098 | |||
| 307 | Ga0265770_1009177 | |||
| 308 | Ga0265760_10044820 | |||
| 309 | Ga0265330_10000388 | |||
| 310 | Ga0265330_10001373 | |||
| 311 | Ga0265330_10002677 | |||
| 312 | Ga0265330_10002831 | |||
| 313 | Ga0265330_10004547 | |||
| 314 | Ga0265320_10026387 | |||
| 315 | Ga0265325_10001684 | |||
| 316 | Ga0265325_10087747 | |||
| 317 | Ga0265329_10000211 | |||
| 318 | Ga0265329_10000237 | |||
| 319 | Ga0265329_10015756 | |||
| 320 | Ga0265339_10000014 | |||
| 321 | Ga0265339_10001897 | |||
| 322 | Ga0265339_10016272 | |||
| 323 | Ga0265316_10000068 | |||
| 324 | Ga0265316_10000693 | |||
| 325 | Ga0265316_10000806 | |||
| 326 | Ga0265316_10005781 | |||
| 327 | Ga0265316_10014393 | |||
| 328 | Ga0265316_10032352 | |||
| 329 | Ga0265316_10082882 | |||
| 330 | Ga0265313_10002645 | |||
| 331 | Ga0265314_10000080 | |||
| 332 | Ga0265314_10006672 | |||
| 333 | Ga0265342_10000373 | |||
| 334 | Ga0265342_10000378 | |||
| 335 | Ga0265342_10001576 | |||
| 336 | Ga0316578_10074801 | |||
| 337 | Ga0307416_100012837 | |||
| 338 | Ga0373950_0000009 | |||
| 339 | Ga0373950_0000027 | |||
| 340 | Ga0373926_0010609 | |||
| 341 | Ga0373923_0002378 | |||
| 342 | Ga0373936_0008926 | |||
| 343 | Ga0373936_0022177 | |||
| 344 | Ga0373945_0001741 | |||
| 345 | Ga0373953_0087308 | |||
| 346 | Ga0373957_0020061 | |||
| 347 | Ga0373957_0042911 | |||
| 348 | Ga0373943_0000158 | |||
| 349 | Ga0373955_0016040 | |||
| 350 | Ga0373955_0131053 | |||
| 351 | Ga0373935_0006108 | |||
| 352 | Ga0373935_0142284 | |||
| 353 | Ga0373927_0000396 | |||
| 354 | Ga0373927_0186119 | |||
| 355 | Ga0373933_0000595 | |||
| 356 | Ga0373933_0048689 | |||
| 357 | Ga0373933_0050748 | |||
| 358 | Ga0373947_0000417 | |||
| 359 | Ga0373947_0343732 | |||
| 360 | Ga0373937_0005133 | |||
| 361 | Ga0373937_0022525 | |||
| 362 | Ga0373937_0359230 | |||
| 363 | Ga0316584_0248808 | |||
| 364 | Ga0373925_0002007 | |||
| 365 | Ga0373925_0007716 | |||
| 366 | Ga0436364_1557433 | |||
| 367 | Ga0436363_0919101 | |||
| 368 | Ga0451855_0501858 | |||
| 369 | Ga0451855_1564577 | |||
| 370 | Ga0453683_0121702 | |||
| 371 | Ga0466965_0019987 | |||
| 372 | Ga0466961_0017997 | |||
| 373 | Ga0466961_0153629 | |||
| 374 | Ga0466961_0228585 | |||
| 375 | Ga0466963_0028637 | |||
| 376 | Ga0466963_0084607 | |||
| 377 | Ga0466963_0171130 | |||
| 378 | Ga0453684_0000011 | |||
| 379 | Ga0453684_0000248 | |||
| 380 | Ga0453684_0002628 | |||
| 381 | Ga0453684_0129461 | |||
| 382 | Ga0453684_0621109 | |||
| 383 | Ga0466971_0010163 | |||
| 384 | Ga0466970_0019470 | |||
| 385 | Ga0466970_0026183 | |||
| 386 | Ga0466970_0035894 | |||
| 387 | Ga0466960_0047056 | |||
| 388 | Ga0466959_0014031 | |||
| 389 | Ga0466959_0052417 | |||
| 390 | Ga0466959_0052862 | |||
| 391 | Ga0451576_0040579 | |||
| 392 | Ga0451576_0251915 | |||
| 393 | Ga0466958_0002671 | |||
| 394 | Ga0466958_0070418 | |||
| 395 | Ga0466958_0092387 | |||
| 396 | Ga0466958_0154869 | |||
| 397 | Ga0466967_0001038 | |||
| 398 | Ga0495592_0006144 | |||
| 399 | Ga0495641_0036374 | |||
| 400 | Ga0495664_0006968 | |||
| 401 | Ga0495608_0007049 | |||
| 402 | Ga0495630_0037554 | |||
| 403 | Ga0495652_0079206 | |||
| 404 | Ga0495640_0058773 | |||
| 405 | Ga0495587_0006633 | |||
| 406 | Ga0495667_0001992 | |||
| 407 | Ga0495635_0008916 | |||
| 408 | Ga0495657_0003376 | |||
| 409 | Ga0495599_0023229 | |||
| 410 | Ga0495646_0005153 | |||
| 411 | Ga0495658_0090784 | |||
| 412 | Ga0495658_0153751 | |||
| 413 | Ga0495613_0097355 | |||
| 414 | Ga0495600_0020787 | |||
| 415 | Ga0495604_0011014 | |||
| 416 | Ga0495674_0007224 | |||
| 417 | Ga0495674_0016849 | |||
| 418 | Ga0495672_0008935 | |||
| 419 | Ga0495680_0018629 | |||
| 420 | Ga0495675_0029673 | |||
| 421 | Ga0495684_0013682 | |||
| 422 | Ga0495686_0059875 | |||
| 423 | Ga0495602_0024138 | |||
| 424 | Ga0495614_0035876 | |||
| 425 | Ga0496100_0014044 | |||
| 426 | Ga0496101_0000699 | |||
| 427 | Ga0496104_0176753 | |||
| 428 | Ga0496109_0022515 | |||
| 429 | Ga0496112_0007538 | |||
| 430 | Ga0496113_0018895 | |||
| 431 | Ga0496113_0243399 | |||
| 432 | Ga0496114_0469099 | |||
| 433 | Ga0496115_0118626 | |||
| 434 | Ga0496115_0162183 | |||
| 435 | Ga0496115_0233814 | |||
| 436 | Ga0496124_0068819 | |||
| 437 | Ga0496126_0000260 | |||
| 438 | Ga0501298_004622 | |||
| 439 | Ga0501033_0003464 | |||
| 440 | Ga0501034_0000630 | |||
| 441 | Ga0501034_0031594 | |||
| 442 | Ga0501036_0190970 | |||
| 443 | Ga0501038_0125011 | |||
| 444 | Ga0501043_0004611 | |||
| 445 | Ga0501046_0003144 | |||
| 446 | Ga0501047_0000011 | |||
| 447 | Ga0501047_0115717 | |||
| 448 | Ga0501048_0001652 | |||
| 449 | Ga0501067_0000014 | |||
| 450 | Ga0501070_0018616 | |||
| 451 | Ga0501072_0000030 | |||
| 452 | Ga0501073_0000375 | |||
| 453 | Ga0501073_0002054 | |||
| 454 | Ga0501073_0004328 | |||
| 455 | Ga0501079_0000150 | |||
| 456 | Ga0501080_0004508 | |||
| 457 | Ga0501080_0362865 | |||
| 458 | Ga0501083_0010206 | |||
| 459 | Ga0501035_0019299 | |||
| 460 | Ga0501044_0020627 | |||
| 461 | nmdc:mga08x19_190847_c1 | |||
| 462 | Ga0495612_0169027 | |||
| 463 | Ga0500554_003210 | |||
| 464 | Ga0501084_0000004 | |||
| 465 | Ga0501084_0032389 | |||
| 466 | Ga0587073_0024598 | |||
| 467 | Ga0501082_0003715 | |||
| 468 | Ga0466962_0008688 | |||
| 469 | Ga0530510_0002898 | |||
| 470 | 2858689739 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2b69-assembly1.cif.gz_A | crystal structure of human udp-glucoronic acid decarboxylase | 0.9745 | 5 | 315 |
| 4lk3-assembly1.cif.gz_E | crystal structure of human udp-xylose synthase r236a substitution | 0.9728 | 5 | 315 |
| 4m55-assembly1.cif.gz_E | crystal structure of human udp-xylose synthase r236h substitution | 0.9685 | 6 | 239 |
| 4lk3-assembly1.cif.gz_D | crystal structure of human udp-xylose synthase r236a substitution | 0.9682 | 5 | 315 |
| 4lk3-assembly1.cif.gz_B | crystal structure of human udp-xylose synthase r236a substitution | 0.9672 | 5 | 315 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A0R0KMW5_231_418_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9822 | 126 | 312 | 3.40.50.720 |
| af_Q4E0S3_8_323_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9792 | 5 | 313 | 3.40.50.720 |
| af_A0A1D6N7M5_279_504_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9775 | 93 | 313 | 3.40.50.720 |
| 4lk3E00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9728 | 5 | 315 | 3.40.50.720 |
| af_A0A0R0KMW5_231_418_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9719 | 126 | 312 | 3.40.50.720 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7G8BNL7-F1-model_v4 | SDR family oxidoreductase | 0.9894 | 5 | 310 |
GO:0005737
GO:0033320 GO:0042732 GO:0048040 GO:0070403 |
| AF-A0A2S7SPS2-F1-model_v4 | UDP-glucuronate decarboxylase (EC 4.1.1.35) | 0.9889 | 5 | 310 |
GO:0005737
GO:0016020 GO:0033320 GO:0042732 GO:0048040 GO:0070403 |
| AF-A0A7T9QID1-F1-model_v4 | deleted | 0.9881 | 5 | 313 |
|
| AF-A0A4Q3EY59-F1-model_v4 | UDP-glucuronate decarboxylase (EC 4.1.1.35) | 0.9879 | 5 | 310 |
GO:0005737
GO:0016020 GO:0033320 GO:0042732 GO:0048040 GO:0070403 |
| AF-A0A2T6DF03-F1-model_v4 | UDP-glucuronate decarboxylase (EC 4.1.1.35) | 0.9873 | 5 | 312 |
GO:0005737
GO:0016020 GO:0033320 GO:0042732 GO:0048040 GO:0070403 |