F348245

General Info

Members Datasets Scaffolds Average Seq Length
235 149 470 393

Family's Representative Sequence

Representative Sequence 3300027907|Ga0207428_10103867|Ga0207428_101038671
Length 426
Sequence MRLSFNSLESASGILPAKAGSHPSQSGCGVRSPAMHRSGRHFLQIPGPTNTPDRVLRAMAQPTIDHRSAEFAALGRSVLEGLQRVFQTSQPVVMYPASGTGAWEAALVNTLSPGDRVLAFDIGEFSKGWAEVARRLGLDVDLVDGDWRHGVDPDIVEARLTEDRGHRIRAVLVVHNETSTGVTSRLPEIRRAIDRPGHPALLLVDAVSSLGSIDLRHDEWRIDVTLSGSQKGLMLPPGLSFNAISEKALAASRSARLPRSYFSWDQMLGPNANGFFPYTPATNLLFGLREALAMLEEEGLMNVFARHQRLAAAARAAVTAWGLEIACAREHEYSPVLTAVMMPPAHDADRLRAVVLERFNMSLGAGLGRFKGRAFRIGHLGDFNELMLAGTLCGVEMGLALAGVPFRRGGVEAAMASLCSPAATAR

Samples

Sample ID Description Type Environment
1 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
2 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
3 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
29 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
30 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
31 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
42 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
50 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
59 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
61 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
86 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
87 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
88 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
89 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
90 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
91 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
92 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
93 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
94 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
95 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
96 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
97 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
98 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
99 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
100 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
101 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
102 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
103 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
104 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
105 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
118 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
119 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
120 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
121 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
122 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
123 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
124 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
125 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
126 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
127 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
128 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
131 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
132 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
133 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
134 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
135 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
136 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
137 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
138 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
139 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
140 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
141 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
142 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
143 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
144 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
145 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
146 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
147 2643221734 Bosea sp. Root670 Isolate Unclassified
148 2643221736 Bosea sp. Root483D1 Isolate Unclassified
149 2851182111 Bosea sp. Tri-44 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 98.3
Metatranscriptomes 0
Isolates 1.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.68
Nodule 0.43
Rhizoplane 0.43
Rhizosphere 92.77
Stem 0
Stem Tuber 0
Unclassified 0.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207428_10103867 3300027907 Bacteria 2193
2 Ga0055526_1000714 3300003771 Bacteria 25196
3 Ga0055524_1000018 3300003775 Bacteria 234806
4 Ga0070690_100012230 3300005330 Bacteria 5047
5 Ga0070670_100004004 3300005331 Bacteria 12292
6 Ga0070670_100021847 3300005331 Bacteria 5504
7 Ga0070670_100034158 3300005331 Bacteria 4377
8 Ga0070666_10016497 3300005335 Bacteria 4724
9 Ga0070666_10094940 3300005335 Bacteria 2052
10 Ga0070689_100052846 3300005340 Bacteria 3143
11 Ga0070661_100021194 3300005344 Bacteria 4639
12 Ga0070669_100040812 3300005353 Bacteria 3374
13 Ga0070675_100009762 3300005354 Bacteria 7476
14 Ga0070675_100079899 3300005354 Bacteria 2726
15 Ga0070673_100005823 3300005364 Bacteria 7942
16 Ga0070713_100073353 3300005436 Bacteria 2897
17 Ga0070705_100203160 3300005440 Unclassified 1360
18 Ga0070700_100090160 3300005441 Bacteria 1999
19 Ga0070681_10137938 3300005458 Bacteria 2369
20 Ga0070681_10217319 3300005458 Bacteria 1827
21 Ga0068867_100020249 3300005459 Bacteria 4740
22 Ga0070679_100005173 3300005530 Bacteria 12075
23 Ga0070679_100083081 3300005530 Bacteria 3192
24 Ga0070684_100314525 3300005535 Bacteria 1438
25 Ga0070672_100006111 3300005543 Bacteria 8057
26 Ga0070672_100135550 3300005543 Bacteria 2027
27 Ga0068855_100011889 3300005563 Bacteria 10525
28 Ga0068855_100223844 3300005563 Bacteria 2109
29 Ga0070664_100000857 3300005564 Bacteria 23536
30 Ga0070664_100006420 3300005564 Bacteria 9488
31 Ga0068859_100055781 3300005617 Bacteria 3975
32 Ga0068864_100034590 3300005618 Bacteria 4298
33 Ga0068861_100056210 3300005719 Bacteria 3003
34 Ga0068863_100001024 3300005841 Bacteria 27928
35 Ga0068863_100001577 3300005841 Bacteria 22546
36 Ga0068863_100304510 3300005841 Bacteria 1546
37 Ga0068860_100089509 3300005843 Bacteria 2930
38 Ga0068860_100139970 3300005843 Bacteria 2325
39 Ga0081455_10001747 3300005937 Bacteria 26273
40 Ga0081538_10011064 3300005981 Bacteria 7337
41 Ga0081538_10014777 3300005981 Bacteria 6089
42 Ga0081540_1004574 3300005983 Bacteria 10479
43 Ga0075365_10099431 3300006038 Bacteria 1990
44 Ga0097621_100087600 3300006237 Bacteria 2600
45 Ga0097621_100206857 3300006237 Bacteria 1706
46 Ga0068871_100038201 3300006358 Bacteria 3832
47 Ga0068871_100094620 3300006358 Bacteria 2494
48 Ga0075428_100007561 3300006844 Bacteria 12043
49 Ga0075428_100027512 3300006844 Bacteria 6291
50 Ga0075428_100154061 3300006844 Bacteria 2497
51 Ga0075430_100004330 3300006846 Bacteria 11991
52 Ga0075430_100004377 3300006846 Bacteria 11921
53 Ga0075430_100026738 3300006846 Bacteria 4907
54 Ga0075431_100005574 3300006847 Bacteria 12430
55 Ga0075431_100008455 3300006847 Bacteria 10308
56 Ga0075431_100017400 3300006847 Bacteria 7304
57 Ga0075431_100018272 3300006847 Bacteria 7134
58 Ga0075431_100102798 3300006847 Bacteria 2949
59 Ga0075433_10054757 3300006852 Bacteria 3481
60 Ga0075433_10093015 3300006852 Bacteria 2667
61 Ga0075429_100004908 3300006880 Bacteria 11522
62 Ga0075429_100066942 3300006880 Bacteria 3126
63 Ga0075429_100073295 3300006880 Bacteria 2982
64 Ga0075429_100084710 3300006880 Bacteria 2763
65 Ga0075429_100164100 3300006880 Bacteria 1946
66 Ga0075429_100253488 3300006880 Bacteria 1541
67 Ga0068865_100155262 3300006881 Bacteria 1740
68 Ga0075436_100046951 3300006914 Bacteria 2978
69 Ga0097620_100055779 3300006931 Bacteria 3975
70 Ga0099794_10001420 3300007265 Bacteria 8385
71 Ga0099794_10001655 3300007265 Bacteria 7871
72 Ga0099795_10028477 3300007788 Bacteria 1900
73 Ga0111539_10000361 3300009094 Bacteria 55975
74 Ga0111539_10009283 3300009094 Bacteria 12421
75 Ga0111539_10012369 3300009094 Bacteria 10699
76 Ga0111539_10091506 3300009094 Bacteria 3574
77 Ga0111539_10092737 3300009094 Bacteria 3549
78 Ga0111539_10182613 3300009094 Bacteria 2450
79 Ga0111539_10189343 3300009094 Bacteria 2401
80 Ga0105245_10001279 3300009098 Bacteria 22692
81 Ga0105247_10025192 3300009101 Bacteria 3589
82 Ga0114129_10005915 3300009147 Bacteria 17311
83 Ga0114129_10007677 3300009147 Bacteria 15350
84 Ga0114129_10011546 3300009147 Bacteria 12578
85 Ga0114129_10050814 3300009147 Bacteria 5822
86 Ga0114129_10076851 3300009147 Bacteria 4647
87 Ga0114129_10109850 3300009147 Bacteria 3806
88 Ga0114129_10251327 3300009147 Bacteria 2373
89 Ga0105242_10004891 3300009176 Bacteria 10370
90 Ga0105248_10002148 3300009177 Bacteria 21802
91 Ga0105248_10010436 3300009177 Bacteria 10231
92 Ga0105248_10016485 3300009177 Bacteria 8133
93 Ga0099796_10004919 3300010159 Bacteria 3284
94 Ga0105246_10004368 3300011119 Bacteria 8600
95 Ga0157374_10049918 3300013296 Bacteria 3887
96 Ga0157374_10058108 3300013296 Bacteria 3615
97 Ga0157378_10001772 3300013297 Bacteria 19377
98 Ga0157375_10048151 3300013308 Bacteria 4168
99 Ga0157375_10232611 3300013308 Bacteria 2002
100 Ga0157375_10250411 3300013308 Bacteria 1932
101 Ga0163163_10110155 3300014325 Bacteria 2781
102 Ga0163163_10167892 3300014325 Bacteria 2241
103 Ga0157379_10041975 3300014968 Bacteria 4082
104 Ga0157376_10066191 3300014969 Bacteria 3054
105 Ga0209675_1001653 3300025291 Bacteria 12405
106 Ga0209025_1005179 3300025294 Bacteria 10776
107 Ga0209564_1000059 3300025295 Bacteria 328782
108 Ga0209256_1000032 3300025299 Bacteria 395041
109 Ga0207697_10016932 3300025315 Bacteria 2998
110 Ga0207697_10074868 3300025315 Bacteria 1422
111 Ga0207695_10192875 3300025913 Bacteria 1954
112 Ga0207660_10154339 3300025917 Bacteria 1766
113 Ga0207649_10159659 3300025920 Bacteria 1561
114 Ga0207652_10036180 3300025921 Bacteria 4174
115 Ga0207652_10129911 3300025921 Bacteria 2246
116 Ga0207652_10179981 3300025921 Bacteria 1900
117 Ga0207681_10041532 3300025923 Bacteria 3067
118 Ga0207650_10000781 3300025925 Bacteria 24513
119 Ga0207687_10052184 3300025927 Bacteria 2853
120 Ga0207664_10033942 3300025929 Bacteria 3926
121 Ga0207644_10161375 3300025931 Bacteria 1743
122 Ga0207644_10231180 3300025931 Bacteria 1469
123 Ga0207704_10124980 3300025938 Bacteria 1769
124 Ga0207691_10087195 3300025940 Bacteria 2800
125 Ga0207711_10011036 3300025941 Bacteria 7507
126 Ga0207689_10015397 3300025942 Bacteria 6475
127 Ga0207661_10003147 3300025944 Bacteria 11445
128 Ga0207679_10003795 3300025945 Bacteria 9362
129 Ga0207679_10064481 3300025945 Bacteria 2738
130 Ga0207651_10140025 3300025960 Bacteria 1867
131 Ga0207651_10191084 3300025960 Bacteria 1633
132 Ga0207677_10043816 3300026023 Bacteria 2977
133 Ga0207703_10009716 3300026035 Bacteria 7548
134 Ga0207708_10039942 3300026075 Bacteria 3576
135 Ga0207641_10001595 3300026088 Bacteria 22140
136 Ga0207676_10001037 3300026095 Bacteria 21292
137 Ga0207676_10206199 3300026095 Bacteria 1740
138 Ga0209588_1044115 3300027671 Bacteria 1442
139 Ga0207428_10019614 3300027907 Bacteria 5762
140 Ga0268264_10070458 3300028381 Bacteria 2960
141 Ga0307408_100010344 3300031548 Bacteria 6153
142 Ga0307406_10063434 3300031901 Bacteria 2394
143 Ga0307407_10063376 3300031903 Bacteria 2168
144 Ga0307416_100078518 3300032002 Bacteria 2778
145 Ga0307416_100299740 3300032002 Bacteria 1597
146 Ga0307411_10025934 3300032005 Bacteria 3520
147 Ga0307415_100015289 3300032126 Bacteria 4539
148 Ga0373960_0013277 3300035121 Bacteria 2064
149 Ga0373955_0043427 3300035172 Bacteria 2418
150 Ga0373961_0017078 3300035241 Bacteria 1877
151 Ga0373962_0050554 3300035242 Bacteria 1197
152 Ga0373937_0004065 3300036401 Bacteria 12400
153 Ga0400483_155986 3300039062 Bacteria 36688
154 Ga0436360_0060713 3300039438 Bacteria 6633
155 Ga0436363_1717356 3300039450 Bacteria 3545
156 Ga0439435_0039839 3300042436 Bacteria 1310
157 Ga0466963_0032640 3300044694 Bacteria 3374
158 Ga0495628_0025532 3300046516 Bacteria 4826
159 Ga0495598_0050390 3300046537 Bacteria 1251
160 Ga0495635_0110704 3300046663 Bacteria 1876
161 Ga0496112_0033378 3300048915 Bacteria 5003
162 Ga0501031_0004377 3300049568 Bacteria 9148
163 Ga0501036_0007201 3300049572 Bacteria 9063
164 Ga0501037_0039415 3300049573 Bacteria 3478
165 Ga0501038_0009594 3300049574 Bacteria 8880
166 Ga0501039_0007501 3300049575 Bacteria 8329
167 Ga0501040_0022021 3300049576 Bacteria 4262
168 Ga0501040_0026810 3300049576 Bacteria 3876
169 Ga0501040_0085620 3300049576 Bacteria 2188
170 Ga0501040_0115302 3300049576 Bacteria 1881
171 Ga0501041_0018847 3300049577 Bacteria 4110
172 Ga0501041_0057529 3300049577 Bacteria 2378
173 Ga0501042_0005862 3300049578 Bacteria 7940
174 Ga0501043_0082295 3300049579 Bacteria 2530
175 Ga0501046_0018261 3300049580 Bacteria 5839
176 Ga0501046_0272961 3300049580 Bacteria 1240
177 Ga0501047_0113902 3300049581 Bacteria 2586
178 Ga0501048_0003569 3300049582 Bacteria 11838
179 Ga0501048_0045082 3300049582 Bacteria 3151
180 Ga0501067_0035415 3300049583 Bacteria 2772
181 Ga0501071_0048448 3300049587 Bacteria 3056
182 Ga0501072_0001585 3300049588 Bacteria 16993
183 Ga0501074_0036266 3300049590 Bacteria 3573
184 Ga0501074_0219870 3300049590 Bacteria 1352
185 Ga0501075_0005796 3300049591 Bacteria 8451
186 Ga0501075_0039866 3300049591 Bacteria 3516
187 Ga0501076_0002734 3300049592 Bacteria 12209
188 Ga0501076_0020553 3300049592 Bacteria 5054
189 Ga0501076_0190062 3300049592 Bacteria 1675
190 Ga0501077_0030704 3300049593 Bacteria 3419
191 Ga0501217_009464 3300049661 Bacteria 2121
192 Ga0501079_0014688 3300049741 Bacteria 5969
193 Ga0501079_0065285 3300049741 Bacteria 2808
194 Ga0501081_0004894 3300049743 Bacteria 8610
195 Ga0501083_0097878 3300049744 Bacteria 1935
196 Ga0501035_0181008 3300049822 Bacteria 1816
197 Ga0501044_0303207 3300049823 Bacteria 1526
198 Ga0501045_0002707 3300049824 Bacteria 12093
199 Ga0501045_0011002 3300049824 Bacteria 6341
200 Ga0501045_0068548 3300049824 Bacteria 2606
201 nmdc:mga0yw44_14028_c1 3300050492 Bacteria 4240
202 nmdc:mga05p37_111170_c1 3300050507 Bacteria 3370
203 nmdc:mga05p37_88110_c1 3300050507 Bacteria 3826
204 nmdc:mga05p37_8951_c1 3300050507 Bacteria 11839
205 nmdc:mga09592_137514_c1 3300050508 Bacteria 2105
206 nmdc:mga09592_292767_c1 3300050508 Bacteria 1411
207 nmdc:mga09592_317505_c1 3300050508 Bacteria 1350
208 nmdc:mga09592_56385_c1 3300050508 Bacteria 3320
209 nmdc:mga0qj67_21663_c1 3300050509 Bacteria 4931
210 nmdc:mga0qj67_2575_c1 3300050509 Bacteria 12963
211 nmdc:mga0qj67_82140_c1 3300050509 Bacteria 2584
212 nmdc:mga06r32_10678_c1 3300050510 Bacteria 8279
213 nmdc:mga06r32_122039_c1 3300050510 Bacteria 2571
214 nmdc:mga06r32_201958_c1 3300050510 Bacteria 1975
215 nmdc:mga08y16_10660_c1 3300050511 Bacteria 9647
216 nmdc:mga08y16_333306_c1 3300050511 Bacteria 1560
217 nmdc:mga08y16_4051_c1 3300050511 Bacteria 15292
218 nmdc:mga08y16_442_c1 3300050511 Bacteria 38335
219 nmdc:mga08y16_98642_c1 3300050511 Bacteria 3042
220 nmdc:mga08x19_21957_c1 3300050514 Bacteria 3947
221 nmdc:mga0a205_23843_c2 3300050515 Bacteria 5410
222 nmdc:mga0a205_3911_c1 3300050515 Bacteria 13332
223 Ga0495601_0051364 3300053077 Bacteria 2602
224 Ga0500578_0091515 3300053086 Bacteria 1930
225 Ga0500641_0004209 3300053096 Bacteria 5078
226 Ga0500556_0003796 3300053104 Bacteria 4380
227 Ga0501084_0022710 3300054114 Bacteria 5236
228 Ga0501082_0098485 3300060353 Bacteria 2528
229 Ga0530510_0005495 3300061734 Bacteria 8778
230 Ga0530510_0013726 3300061734 Bacteria 5702
231 Ga0530510_0148058 3300061734 Bacteria 1732
232 2552113422 2551306166 Bacteria 9731570
233 2644734347 2643221734 Bacteria 5365412
234 2644745489 2643221736 Bacteria 6608466
235 2851183822 2851182111 Bacteria 6047226
236 Ga0207428_10103867
237 Ga0055526_1000714
238 Ga0055524_1000018
239 Ga0070690_100012230
240 Ga0070670_100004004
241 Ga0070670_100021847
242 Ga0070670_100034158
243 Ga0070666_10016497
244 Ga0070666_10094940
245 Ga0070689_100052846
246 Ga0070661_100021194
247 Ga0070669_100040812
248 Ga0070675_100009762
249 Ga0070675_100079899
250 Ga0070673_100005823
251 Ga0070713_100073353
252 Ga0070705_100203160
253 Ga0070700_100090160
254 Ga0070681_10137938
255 Ga0070681_10217319
256 Ga0068867_100020249
257 Ga0070679_100005173
258 Ga0070679_100083081
259 Ga0070684_100314525
260 Ga0070672_100006111
261 Ga0070672_100135550
262 Ga0068855_100011889
263 Ga0068855_100223844
264 Ga0070664_100000857
265 Ga0070664_100006420
266 Ga0068859_100055781
267 Ga0068864_100034590
268 Ga0068861_100056210
269 Ga0068863_100001024
270 Ga0068863_100001577
271 Ga0068863_100304510
272 Ga0068860_100089509
273 Ga0068860_100139970
274 Ga0081455_10001747
275 Ga0081538_10011064
276 Ga0081538_10014777
277 Ga0081540_1004574
278 Ga0075365_10099431
279 Ga0097621_100087600
280 Ga0097621_100206857
281 Ga0068871_100038201
282 Ga0068871_100094620
283 Ga0075428_100007561
284 Ga0075428_100027512
285 Ga0075428_100154061
286 Ga0075430_100004330
287 Ga0075430_100004377
288 Ga0075430_100026738
289 Ga0075431_100005574
290 Ga0075431_100008455
291 Ga0075431_100017400
292 Ga0075431_100018272
293 Ga0075431_100102798
294 Ga0075433_10054757
295 Ga0075433_10093015
296 Ga0075429_100004908
297 Ga0075429_100066942
298 Ga0075429_100073295
299 Ga0075429_100084710
300 Ga0075429_100164100
301 Ga0075429_100253488
302 Ga0068865_100155262
303 Ga0075436_100046951
304 Ga0097620_100055779
305 Ga0099794_10001420
306 Ga0099794_10001655
307 Ga0099795_10028477
308 Ga0111539_10000361
309 Ga0111539_10009283
310 Ga0111539_10012369
311 Ga0111539_10091506
312 Ga0111539_10092737
313 Ga0111539_10182613
314 Ga0111539_10189343
315 Ga0105245_10001279
316 Ga0105247_10025192
317 Ga0114129_10005915
318 Ga0114129_10007677
319 Ga0114129_10011546
320 Ga0114129_10050814
321 Ga0114129_10076851
322 Ga0114129_10109850
323 Ga0114129_10251327
324 Ga0105242_10004891
325 Ga0105248_10002148
326 Ga0105248_10010436
327 Ga0105248_10016485
328 Ga0099796_10004919
329 Ga0105246_10004368
330 Ga0157374_10049918
331 Ga0157374_10058108
332 Ga0157378_10001772
333 Ga0157375_10048151
334 Ga0157375_10232611
335 Ga0157375_10250411
336 Ga0163163_10110155
337 Ga0163163_10167892
338 Ga0157379_10041975
339 Ga0157376_10066191
340 Ga0209675_1001653
341 Ga0209025_1005179
342 Ga0209564_1000059
343 Ga0209256_1000032
344 Ga0207697_10016932
345 Ga0207697_10074868
346 Ga0207695_10192875
347 Ga0207660_10154339
348 Ga0207649_10159659
349 Ga0207652_10036180
350 Ga0207652_10129911
351 Ga0207652_10179981
352 Ga0207681_10041532
353 Ga0207650_10000781
354 Ga0207687_10052184
355 Ga0207664_10033942
356 Ga0207644_10161375
357 Ga0207644_10231180
358 Ga0207704_10124980
359 Ga0207691_10087195
360 Ga0207711_10011036
361 Ga0207689_10015397
362 Ga0207661_10003147
363 Ga0207679_10003795
364 Ga0207679_10064481
365 Ga0207651_10140025
366 Ga0207651_10191084
367 Ga0207677_10043816
368 Ga0207703_10009716
369 Ga0207708_10039942
370 Ga0207641_10001595
371 Ga0207676_10001037
372 Ga0207676_10206199
373 Ga0209588_1044115
374 Ga0207428_10019614
375 Ga0268264_10070458
376 Ga0307408_100010344
377 Ga0307406_10063434
378 Ga0307407_10063376
379 Ga0307416_100078518
380 Ga0307416_100299740
381 Ga0307411_10025934
382 Ga0307415_100015289
383 Ga0373960_0013277
384 Ga0373955_0043427
385 Ga0373961_0017078
386 Ga0373962_0050554
387 Ga0373937_0004065
388 Ga0400483_155986
389 Ga0436360_0060713
390 Ga0436363_1717356
391 Ga0439435_0039839
392 Ga0466963_0032640
393 Ga0495628_0025532
394 Ga0495598_0050390
395 Ga0495635_0110704
396 Ga0496112_0033378
397 Ga0501031_0004377
398 Ga0501036_0007201
399 Ga0501037_0039415
400 Ga0501038_0009594
401 Ga0501039_0007501
402 Ga0501040_0022021
403 Ga0501040_0026810
404 Ga0501040_0085620
405 Ga0501040_0115302
406 Ga0501041_0018847
407 Ga0501041_0057529
408 Ga0501042_0005862
409 Ga0501043_0082295
410 Ga0501046_0018261
411 Ga0501046_0272961
412 Ga0501047_0113902
413 Ga0501048_0003569
414 Ga0501048_0045082
415 Ga0501067_0035415
416 Ga0501071_0048448
417 Ga0501072_0001585
418 Ga0501074_0036266
419 Ga0501074_0219870
420 Ga0501075_0005796
421 Ga0501075_0039866
422 Ga0501076_0002734
423 Ga0501076_0020553
424 Ga0501076_0190062
425 Ga0501077_0030704
426 Ga0501217_009464
427 Ga0501079_0014688
428 Ga0501079_0065285
429 Ga0501081_0004894
430 Ga0501083_0097878
431 Ga0501035_0181008
432 Ga0501044_0303207
433 Ga0501045_0002707
434 Ga0501045_0011002
435 Ga0501045_0068548
436 nmdc:mga0yw44_14028_c1
437 nmdc:mga05p37_111170_c1
438 nmdc:mga05p37_88110_c1
439 nmdc:mga05p37_8951_c1
440 nmdc:mga09592_137514_c1
441 nmdc:mga09592_292767_c1
442 nmdc:mga09592_317505_c1
443 nmdc:mga09592_56385_c1
444 nmdc:mga0qj67_21663_c1
445 nmdc:mga0qj67_2575_c1
446 nmdc:mga0qj67_82140_c1
447 nmdc:mga06r32_10678_c1
448 nmdc:mga06r32_122039_c1
449 nmdc:mga06r32_201958_c1
450 nmdc:mga08y16_10660_c1
451 nmdc:mga08y16_333306_c1
452 nmdc:mga08y16_4051_c1
453 nmdc:mga08y16_442_c1
454 nmdc:mga08y16_98642_c1
455 nmdc:mga08x19_21957_c1
456 nmdc:mga0a205_23843_c2
457 nmdc:mga0a205_3911_c1
458 Ga0495601_0051364
459 Ga0500578_0091515
460 Ga0500641_0004209
461 Ga0500556_0003796
462 Ga0501084_0022710
463 Ga0501082_0098485
464 Ga0530510_0005495
465 Ga0530510_0013726
466 Ga0530510_0148058
467 2552113422
468 2644734347
469 2644745489
470 2851183822

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00266

Aminotran_5

Aminotransferase class-V

41

366

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
6pk3-assembly1.cif.gz_B alanine-glyoxylate aminotransferase 1 (agt1) from arabidopsis thaliana 0.9714 1 383
2dr1-assembly1.cif.gz_B crystal structure of the ph1308 protein from pyrococcus horikoshii ot3 0.9462 15 365
1iug-assembly1.cif.gz_B the crystal structure of aspartate aminotransferase which belongs to subgroup iv from thermus thermophilus 0.9439 10 366
6pk3-assembly1.cif.gz_B alanine-glyoxylate aminotransferase 1 (agt1) from arabidopsis thaliana 0.9378 1 383
2yob-assembly1.cif.gz_B high resolution agxt_m structure 0.9344 4 366
ID Description Score Start End Superfamily
af_A0A1D6KIG3_10_230_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9766 16 230 3.40.640.10
af_A0A1D6KIH4_267_382_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9712 271 384 3.90.1150.10
af_B6T171_24_270_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9698 19 260 3.40.640.10
af_Q58369_36_182_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9602 34 182 3.40.640.10
af_Q2FXK2_10_249_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9549 11 248 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A2E9NWN9-F1-model_v4 Serine--glyoxylate aminotransferase 0.993 31 383 GO:0004760
GO:0005777
GO:0008453
GO:0019265
AF-A0A7W7VCS5-F1-model_v4 Alanine-glyoxylate transaminase/serine-glyoxylate transaminase/serine-pyruvate transaminase (EC 2.6.1.44, EC 2.6.1.45, EC 2.6.1.51) 0.9919 20 384 GO:0004760
GO:0005777
GO:0008453
GO:0019265
GO:0050281
AF-D6VB40-F1-model_v4 Aminotransferase class V 0.9918 59 313 GO:0004760
GO:0005777
GO:0008453
GO:0019265
AF-A0A7X5WJ28-F1-model_v4 deleted 0.9916 127 215
AF-A0A352SDU8-F1-model_v4 Serine--glyoxylate aminotransferase 0.9898 139 378 GO:0004760
GO:0005777
GO:0008453
GO:0019265

Map