F348044

General Info

Members Datasets Scaffolds Average Seq Length
235 153 470 324

Family's Representative Sequence

Representative Sequence 3300007076|Ga0075435_100226479|Ga0075435_1002264792
Length 333
Sequence MRVTLLHSADALESPVDPVLEQLTRAIEAGSHEVIPVSVADDIVPIVEALRRERPDLVFNLTESFAGVSSLDSNVAALLNLLGLRYTGSSPAGLLVAGDKSLAKKVLRFHGIRTPEFATLYRGAVDWAGDIQFPVIVKPPQEDASIGITSGSVVHDLKDLLGRIDSLQSEFHQPVLVEEFVDGREFYVGVLGNLHPQPLAVVELDFSGLPAGAPRIASWEAKWGANGTGSDAEAAHSTEFAGTRSIFPTDLDEELAERMQRVAVETFETLRLRDYARIDLRVSASGEIFVIEVNPNCYLERSAEFARAAAMDGIDYDALVARIIELAMARYAR

Samples

Sample ID Description Type Environment
1 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
2 3300001976 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
20 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
51 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
52 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
84 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
85 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
86 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
87 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
88 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
89 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
90 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
91 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
92 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
93 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
94 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
95 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
96 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
97 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
98 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
99 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
100 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
101 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
102 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
103 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
104 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
105 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
106 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
107 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
108 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
109 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
110 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
111 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
112 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
113 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
114 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
115 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
116 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
117 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
118 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
119 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
120 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
121 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
122 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
123 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
124 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
125 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
126 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
127 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
128 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
129 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
130 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
131 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
132 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
133 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
143 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
144 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
145 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
146 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
148 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
149 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
150 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
151 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
152 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
153 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.43
Rhizosphere 98.72
Stem 0
Stem Tuber 0
Unclassified 18.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075435_100226479 3300007076 Bacteria 1588
2 JGI24752J21851_1004292 3300001976 Bacteria 1870
3 JGI25406J46586_10014300 3300003203 Bacteria 3378
4 Ga0070658_10006900 3300005327 Bacteria 9174
5 Ga0070658_10138403 3300005327 Bacteria 2032
6 Ga0070676_10111062 3300005328 Unclassified 1707
7 Ga0070683_100011305 3300005329 Bacteria 7709
8 Ga0070683_100031147 3300005329 Bacteria 4847
9 Ga0070683_100044985 3300005329 Unclassified 4074
10 Ga0070683_100144700 3300005329 Bacteria 2252
11 Ga0070680_100005273 3300005336 Bacteria 9776
12 Ga0070680_100044697 3300005336 Bacteria 3599
13 Ga0070680_100180547 3300005336 Bacteria 1778
14 Ga0070689_100082982 3300005340 Unclassified 2518
15 Ga0070687_100026459 3300005343 Unclassified 2794
16 Ga0070661_100007513 3300005344 Bacteria 7519
17 Ga0070668_100331308 3300005347 Unclassified 1284
18 Ga0070668_100426617 3300005347 Unclassified 1136
19 Ga0070675_100143953 3300005354 Unclassified 2039
20 Ga0070675_100258777 3300005354 Unclassified 1524
21 Ga0070688_100005532 3300005365 Bacteria 6666
22 Ga0070659_100179717 3300005366 Unclassified 1736
23 Ga0070667_100093355 3300005367 Unclassified 2591
24 Ga0070667_100109428 3300005367 Unclassified 2395
25 Ga0070709_10035488 3300005434 Unclassified 3031
26 Ga0070709_10061688 3300005434 Unclassified 2388
27 Ga0070714_100002879 3300005435 Bacteria 12732
28 Ga0070713_100000103 3300005436 Bacteria 54646
29 Ga0070713_100054148 3300005436 Unclassified 3327
30 Ga0070713_100168151 3300005436 Unclassified 1962
31 Ga0070713_100229739 3300005436 Bacteria 1686
32 Ga0070713_100352073 3300005436 Bacteria 1367
33 Ga0070710_10038735 3300005437 Bacteria 2620
34 Ga0070710_10198412 3300005437 Unclassified 1265
35 Ga0070711_100162911 3300005439 Bacteria 1692
36 Ga0070711_100218796 3300005439 Bacteria 1479
37 Ga0070708_100000005 3300005445 Bacteria 159112
38 Ga0070663_100115609 3300005455 Bacteria 2021
39 Ga0070681_10016628 3300005458 Bacteria 7345
40 Ga0070681_10017689 3300005458 Bacteria 7125
41 Ga0070681_10028522 3300005458 Bacteria 5612
42 Ga0070681_10043079 3300005458 Bacteria 4522
43 Ga0070681_10239831 3300005458 Bacteria 1727
44 Ga0070681_10256172 3300005458 Bacteria 1662
45 Ga0070706_100040643 3300005467 Bacteria 4293
46 Ga0070707_100408162 3300005468 Bacteria 1319
47 Ga0070679_100008735 3300005530 Bacteria 9557
48 Ga0070679_100015959 3300005530 Bacteria 7232
49 Ga0070679_100027909 3300005530 Bacteria 5562
50 Ga0070679_100078124 3300005530 Unclassified 3299
51 Ga0070679_100104769 3300005530 Unclassified 2815
52 Ga0070679_100358053 3300005530 Unclassified 1407
53 Ga0070684_100004624 3300005535 Bacteria 10497
54 Ga0070684_100024052 3300005535 Bacteria 5106
55 Ga0070684_100035965 3300005535 Unclassified 4242
56 Ga0070684_100047670 3300005535 Bacteria 3714
57 Ga0070684_100273534 3300005535 Bacteria 1547
58 Ga0070684_100285020 3300005535 Bacteria 1514
59 Ga0068853_100005732 3300005539 Bacteria 9778
60 Ga0070696_100002327 3300005546 Bacteria 12539
61 Ga0068855_100013745 3300005563 Bacteria 9757
62 Ga0068855_100019724 3300005563 Bacteria 8098
63 Ga0070664_100162132 3300005564 Bacteria 1979
64 Ga0068852_100345674 3300005616 Bacteria 1451
65 Ga0068862_100065787 3300005844 Bacteria 3123
66 Ga0081539_10000354 3300005985 Bacteria 100885
67 Ga0070717_10009422 3300006028 Bacteria 7337
68 Ga0070717_10367208 3300006028 Bacteria 1289
69 Ga0070717_10423537 3300006028 Bacteria 1198
70 Ga0070712_100011050 3300006175 Bacteria 5714
71 Ga0075428_100331637 3300006844 Unclassified 1634
72 Ga0075430_100005810 3300006846 Bacteria 10409
73 Ga0075430_100071772 3300006846 Bacteria 2904
74 Ga0075431_100008288 3300006847 Bacteria 10391
75 Ga0075429_100267426 3300006880 Bacteria 1497
76 Ga0075435_100147393 3300007076 Bacteria 1977
77 Ga0105240_10044967 3300009093 Bacteria 5604
78 Ga0105245_10018014 3300009098 Bacteria 6168
79 Ga0105248_10073252 3300009177 Bacteria 3849
80 Ga0105248_10209524 3300009177 Bacteria 2196
81 Ga0105237_10040232 3300009545 Unclassified 4715
82 Ga0157370_10003041 3300013104 Bacteria 19885
83 Ga0157370_10031129 3300013104 Bacteria 5222
84 Ga0157370_10061112 3300013104 Unclassified 3575
85 Ga0157369_10027562 3300013105 Bacteria 6296
86 Ga0157369_10231587 3300013105 Bacteria 1931
87 Ga0163162_10097247 3300013306 Unclassified 3032
88 Ga0157372_10028968 3300013307 Bacteria 6042
89 Ga0157372_10067772 3300013307 Bacteria 4011
90 Ga0157372_10085437 3300013307 Unclassified 3578
91 Ga0157372_10250249 3300013307 Bacteria 2057
92 Ga0157372_10539764 3300013307 Unclassified 1359
93 Ga0157372_10833332 3300013307 Bacteria 1071
94 Ga0157375_10114932 3300013308 Bacteria 2794
95 Ga0157375_10290557 3300013308 Unclassified 1798
96 Ga0182008_10037667 3300014497 Bacteria 2419
97 Ga0213876_10048279 3300021384 Bacteria 2249
98 Ga0207699_10030238 3300025906 Unclassified 3029
99 Ga0207699_10131524 3300025906 Bacteria 1633
100 Ga0207645_10101945 3300025907 Bacteria 1852
101 Ga0207705_10033386 3300025909 Bacteria 3676
102 Ga0207705_10086917 3300025909 Bacteria 2286
103 Ga0207684_10127679 3300025910 Bacteria 2182
104 Ga0207707_10004538 3300025912 Bacteria 12209
105 Ga0207707_10029148 3300025912 Unclassified 4824
106 Ga0207707_10035772 3300025912 Bacteria 4343
107 Ga0207707_10177916 3300025912 Bacteria 1858
108 Ga0207695_10003631 3300025913 Bacteria 21563
109 Ga0207695_10025667 3300025913 Bacteria 6592
110 Ga0207695_10163327 3300025913 Bacteria 2157
111 Ga0207693_10009606 3300025915 Bacteria 7876
112 Ga0207663_10132581 3300025916 Bacteria 1724
113 Ga0207660_10004451 3300025917 Bacteria 9129
114 Ga0207660_10106753 3300025917 Bacteria 2100
115 Ga0207660_10166990 3300025917 Bacteria 1701
116 Ga0207662_10008717 3300025918 Bacteria 5562
117 Ga0207652_10013185 3300025921 Bacteria 6693
118 Ga0207652_10016807 3300025921 Bacteria 5979
119 Ga0207652_10116597 3300025921 Bacteria 2372
120 Ga0207652_10247046 3300025921 Bacteria 1609
121 Ga0207646_10294845 3300025922 Bacteria 1465
122 Ga0207694_10015012 3300025924 Bacteria 5840
123 Ga0207687_10069257 3300025927 Unclassified 2516
124 Ga0207700_10000127 3300025928 Bacteria 45226
125 Ga0207700_10383294 3300025928 Unclassified 1230
126 Ga0207664_10005657 3300025929 Bacteria 8542
127 Ga0207664_10051932 3300025929 Unclassified 3239
128 Ga0207670_10031897 3300025936 Unclassified 3382
129 Ga0207669_10287187 3300025937 Unclassified 1244
130 Ga0207704_10293560 3300025938 Unclassified 1242
131 Ga0207665_10143768 3300025939 Bacteria 1703
132 Ga0207689_10044468 3300025942 Bacteria 3672
133 Ga0207661_10003935 3300025944 Bacteria 10371
134 Ga0207661_10006436 3300025944 Bacteria 8304
135 Ga0207661_10017504 3300025944 Bacteria 5306
136 Ga0207661_10019210 3300025944 Bacteria 5091
137 Ga0207661_10024464 3300025944 Bacteria 4578
138 Ga0207661_10028431 3300025944 Bacteria 4281
139 Ga0207661_10254816 3300025944 Unclassified 1561
140 Ga0207679_10247376 3300025945 Bacteria 1514
141 Ga0207667_10076648 3300025949 Unclassified 3469
142 Ga0207712_10120113 3300025961 Bacteria 1987
143 Ga0207639_10003090 3300026041 Bacteria 11191
144 Ga0207678_10176058 3300026067 Bacteria 1826
145 Ga0207702_10560484 3300026078 Unclassified 1118
146 Ga0207648_10072068 3300026089 Bacteria 3011
147 Ga0207683_10484095 3300026121 Unclassified 1142
148 Ga0268265_10024400 3300028380 Bacteria 4277
149 Ga0316576_10006355 3300031727 Bacteria 7346
150 Ga0316576_10065779 3300031727 Bacteria 2665
151 Ga0316578_10017256 3300031728 Bacteria 3925
152 Ga0307405_10015044 3300031731 Bacteria 4177
153 Ga0307413_10045529 3300031824 Bacteria 2601
154 Ga0307410_10001932 3300031852 Bacteria 9723
155 Ga0307406_10003932 3300031901 Bacteria 8072
156 Ga0307407_10038692 3300031903 Bacteria 2645
157 Ga0307412_10010584 3300031911 Bacteria 5314
158 Ga0307409_100029749 3300031995 Bacteria 3913
159 Ga0307416_100006034 3300032002 Bacteria 7538
160 Ga0307414_10005899 3300032004 Bacteria 6778
161 Ga0307411_10061227 3300032005 Bacteria 2504
162 Ga0373926_0056495 3300035083 Unclassified 1424
163 Ga0373934_0021069 3300035086 Bacteria 2510
164 Ga0373945_0002451 3300035116 Bacteria 5824
165 Ga0373943_0008004 3300035170 Bacteria 4744
166 Ga0373955_0013639 3300035172 Bacteria 3936
167 Ga0373935_0012066 3300035692 Bacteria 5194
168 Ga0373927_0010536 3300035695 Bacteria 6161
169 Ga0373927_0014603 3300035695 Bacteria 5195
170 Ga0373927_0114205 3300035695 Bacteria 1760
171 Ga0373937_0007403 3300036401 Bacteria 9499
172 Ga0316584_0050546 3300036712 Bacteria 3108
173 Ga0373925_0002662 3300037068 Bacteria 14171
174 Ga0373925_0094660 3300037068 Bacteria 2287
175 Ga0436365_1094424 3300039437 Bacteria 1525
176 Ga0466965_0071183 3300044683 Bacteria 1749
177 Ga0466967_0005498 3300045976 Bacteria 8790
178 Ga0466967_0309554 3300045976 Unclassified 1521
179 Ga0466967_0361712 3300045976 Unclassified 1406
180 Ga0495603_0004027 3300046455 Bacteria 8749
181 Ga0495651_0028871 3300046462 Bacteria 4325
182 Ga0495580_0000095 3300046472 Bacteria 58325
183 Ga0495580_0151590 3300046472 Bacteria 1606
184 Ga0495582_0003028 3300046473 Bacteria 9418
185 Ga0495639_0000918 3300046475 Bacteria 13303
186 Ga0495594_0020927 3300046499 Unclassified 3489
187 Ga0495594_0076453 3300046499 Bacteria 1867
188 Ga0495594_0201894 3300046499 Bacteria 1133
189 Ga0495628_0137362 3300046516 Bacteria 1867
190 Ga0495665_0002732 3300046531 Bacteria 9525
191 Ga0495665_0005249 3300046531 Bacteria 6982
192 Ga0495586_0012857 3300046535 Bacteria 4438
193 Ga0495587_0005550 3300046536 Bacteria 8231
194 Ga0495587_0019168 3300046536 Bacteria 4238
195 Ga0495645_0004641 3300046543 Bacteria 9377
196 Ga0495667_0010252 3300046559 Bacteria 6339
197 Ga0495588_0001183 3300046674 Bacteria 11238
198 Ga0495599_0009479 3300046678 Bacteria 5952
199 Ga0495623_0002415 3300046679 Bacteria 12379
200 Ga0495658_0000672 3300046683 Bacteria 18570
201 Ga0495613_0037463 3300046689 Bacteria 3595
202 Ga0495581_0003419 3300047315 Bacteria 9109
203 Ga0495581_0024213 3300047315 Bacteria 3518
204 Ga0495636_0036843 3300047318 Bacteria 2019
205 Ga0495674_0288224 3300047319 Bacteria 1343
206 Ga0495672_0010122 3300047320 Bacteria 6744
207 Ga0495675_0005999 3300047444 Bacteria 7429
208 Ga0495675_0064536 3300047444 Bacteria 2316
209 Ga0495593_0000475 3300047673 Bacteria 22582
210 Ga0495593_0153067 3300047673 Bacteria 1166
211 Ga0495614_0000001 3300048089 Bacteria 137656
212 Ga0496115_0254183 3300048918 Archaea 1446
213 Ga0501031_0028458 3300049568 Bacteria 3642
214 Ga0501033_0001992 3300049570 Bacteria 17800
215 Ga0501034_0235175 3300049571 Bacteria 1780
216 Ga0501036_0130421 3300049572 Bacteria 2122
217 Ga0501038_0108413 3300049574 Bacteria 2303
218 Ga0501040_0004685 3300049576 Bacteria 8875
219 Ga0501042_0207229 3300049578 Bacteria 1414
220 Ga0501047_0131872 3300049581 Bacteria 2379
221 Ga0501048_0022002 3300049582 Bacteria 4667
222 Ga0501075_0012812 3300049591 Bacteria 5969
223 Ga0501076_0100789 3300049592 Bacteria 2327
224 Ga0501079_0143109 3300049741 Bacteria 1863
225 Ga0501081_0029948 3300049743 Bacteria 3681
226 Ga0501081_0358288 3300049743 Bacteria 1076
227 Ga0501044_0010699 3300049823 Bacteria 9954
228 Ga0501045_0070786 3300049824 Bacteria 2566
229 nmdc:mga09592_206553_c1 3300050508 Bacteria 1701
230 nmdc:mga0qj67_8766_c1 3300050509 Bacteria 7506
231 nmdc:mga06r32_77267_c1 3300050510 Bacteria 3234
232 nmdc:mga0rr50_104671_c1 3300050513 Bacteria 2229
233 nmdc:mga0rr50_275817_c1 3300050513 Bacteria 1402
234 nmdc:mga08x19_170081_c1 3300050514 Bacteria 1484
235 Ga0501082_0260610 3300060353 Bacteria 1508
236 Ga0075435_100226479
237 JGI24752J21851_1004292
238 JGI25406J46586_10014300
239 Ga0070658_10006900
240 Ga0070658_10138403
241 Ga0070676_10111062
242 Ga0070683_100011305
243 Ga0070683_100031147
244 Ga0070683_100044985
245 Ga0070683_100144700
246 Ga0070680_100005273
247 Ga0070680_100044697
248 Ga0070680_100180547
249 Ga0070689_100082982
250 Ga0070687_100026459
251 Ga0070661_100007513
252 Ga0070668_100331308
253 Ga0070668_100426617
254 Ga0070675_100143953
255 Ga0070675_100258777
256 Ga0070688_100005532
257 Ga0070659_100179717
258 Ga0070667_100093355
259 Ga0070667_100109428
260 Ga0070709_10035488
261 Ga0070709_10061688
262 Ga0070714_100002879
263 Ga0070713_100000103
264 Ga0070713_100054148
265 Ga0070713_100168151
266 Ga0070713_100229739
267 Ga0070713_100352073
268 Ga0070710_10038735
269 Ga0070710_10198412
270 Ga0070711_100162911
271 Ga0070711_100218796
272 Ga0070708_100000005
273 Ga0070663_100115609
274 Ga0070681_10016628
275 Ga0070681_10017689
276 Ga0070681_10028522
277 Ga0070681_10043079
278 Ga0070681_10239831
279 Ga0070681_10256172
280 Ga0070706_100040643
281 Ga0070707_100408162
282 Ga0070679_100008735
283 Ga0070679_100015959
284 Ga0070679_100027909
285 Ga0070679_100078124
286 Ga0070679_100104769
287 Ga0070679_100358053
288 Ga0070684_100004624
289 Ga0070684_100024052
290 Ga0070684_100035965
291 Ga0070684_100047670
292 Ga0070684_100273534
293 Ga0070684_100285020
294 Ga0068853_100005732
295 Ga0070696_100002327
296 Ga0068855_100013745
297 Ga0068855_100019724
298 Ga0070664_100162132
299 Ga0068852_100345674
300 Ga0068862_100065787
301 Ga0081539_10000354
302 Ga0070717_10009422
303 Ga0070717_10367208
304 Ga0070717_10423537
305 Ga0070712_100011050
306 Ga0075428_100331637
307 Ga0075430_100005810
308 Ga0075430_100071772
309 Ga0075431_100008288
310 Ga0075429_100267426
311 Ga0075435_100147393
312 Ga0105240_10044967
313 Ga0105245_10018014
314 Ga0105248_10073252
315 Ga0105248_10209524
316 Ga0105237_10040232
317 Ga0157370_10003041
318 Ga0157370_10031129
319 Ga0157370_10061112
320 Ga0157369_10027562
321 Ga0157369_10231587
322 Ga0163162_10097247
323 Ga0157372_10028968
324 Ga0157372_10067772
325 Ga0157372_10085437
326 Ga0157372_10250249
327 Ga0157372_10539764
328 Ga0157372_10833332
329 Ga0157375_10114932
330 Ga0157375_10290557
331 Ga0182008_10037667
332 Ga0213876_10048279
333 Ga0207699_10030238
334 Ga0207699_10131524
335 Ga0207645_10101945
336 Ga0207705_10033386
337 Ga0207705_10086917
338 Ga0207684_10127679
339 Ga0207707_10004538
340 Ga0207707_10029148
341 Ga0207707_10035772
342 Ga0207707_10177916
343 Ga0207695_10003631
344 Ga0207695_10025667
345 Ga0207695_10163327
346 Ga0207693_10009606
347 Ga0207663_10132581
348 Ga0207660_10004451
349 Ga0207660_10106753
350 Ga0207660_10166990
351 Ga0207662_10008717
352 Ga0207652_10013185
353 Ga0207652_10016807
354 Ga0207652_10116597
355 Ga0207652_10247046
356 Ga0207646_10294845
357 Ga0207694_10015012
358 Ga0207687_10069257
359 Ga0207700_10000127
360 Ga0207700_10383294
361 Ga0207664_10005657
362 Ga0207664_10051932
363 Ga0207670_10031897
364 Ga0207669_10287187
365 Ga0207704_10293560
366 Ga0207665_10143768
367 Ga0207689_10044468
368 Ga0207661_10003935
369 Ga0207661_10006436
370 Ga0207661_10017504
371 Ga0207661_10019210
372 Ga0207661_10024464
373 Ga0207661_10028431
374 Ga0207661_10254816
375 Ga0207679_10247376
376 Ga0207667_10076648
377 Ga0207712_10120113
378 Ga0207639_10003090
379 Ga0207678_10176058
380 Ga0207702_10560484
381 Ga0207648_10072068
382 Ga0207683_10484095
383 Ga0268265_10024400
384 Ga0316576_10006355
385 Ga0316576_10065779
386 Ga0316578_10017256
387 Ga0307405_10015044
388 Ga0307413_10045529
389 Ga0307410_10001932
390 Ga0307406_10003932
391 Ga0307407_10038692
392 Ga0307412_10010584
393 Ga0307409_100029749
394 Ga0307416_100006034
395 Ga0307414_10005899
396 Ga0307411_10061227
397 Ga0373926_0056495
398 Ga0373934_0021069
399 Ga0373945_0002451
400 Ga0373943_0008004
401 Ga0373955_0013639
402 Ga0373935_0012066
403 Ga0373927_0010536
404 Ga0373927_0014603
405 Ga0373927_0114205
406 Ga0373937_0007403
407 Ga0316584_0050546
408 Ga0373925_0002662
409 Ga0373925_0094660
410 Ga0436365_1094424
411 Ga0466965_0071183
412 Ga0466967_0005498
413 Ga0466967_0309554
414 Ga0466967_0361712
415 Ga0495603_0004027
416 Ga0495651_0028871
417 Ga0495580_0000095
418 Ga0495580_0151590
419 Ga0495582_0003028
420 Ga0495639_0000918
421 Ga0495594_0020927
422 Ga0495594_0076453
423 Ga0495594_0201894
424 Ga0495628_0137362
425 Ga0495665_0002732
426 Ga0495665_0005249
427 Ga0495586_0012857
428 Ga0495587_0005550
429 Ga0495587_0019168
430 Ga0495645_0004641
431 Ga0495667_0010252
432 Ga0495588_0001183
433 Ga0495599_0009479
434 Ga0495623_0002415
435 Ga0495658_0000672
436 Ga0495613_0037463
437 Ga0495581_0003419
438 Ga0495581_0024213
439 Ga0495636_0036843
440 Ga0495674_0288224
441 Ga0495672_0010122
442 Ga0495675_0005999
443 Ga0495675_0064536
444 Ga0495593_0000475
445 Ga0495593_0153067
446 Ga0495614_0000001
447 Ga0496115_0254183
448 Ga0501031_0028458
449 Ga0501033_0001992
450 Ga0501034_0235175
451 Ga0501036_0130421
452 Ga0501038_0108413
453 Ga0501040_0004685
454 Ga0501042_0207229
455 Ga0501047_0131872
456 Ga0501048_0022002
457 Ga0501075_0012812
458 Ga0501076_0100789
459 Ga0501079_0143109
460 Ga0501081_0029948
461 Ga0501081_0358288
462 Ga0501044_0010699
463 Ga0501045_0070786
464 nmdc:mga09592_206553_c1
465 nmdc:mga0qj67_8766_c1
466 nmdc:mga06r32_77267_c1
467 nmdc:mga0rr50_104671_c1
468 nmdc:mga0rr50_275817_c1
469 nmdc:mga08x19_170081_c1
470 Ga0501082_0260610

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07478

Dala_Dala_lig_C

D-ala D-ala ligase C-terminus

106

325

0.84

PF02655

ATP-grasp_3

ATP-grasp domain

97

297

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
5dmx-assembly1.cif.gz_A crystal structure of d-alanine-d-alanine ligase from acinetobacter baumannii, space group p212121 0.8751 2 321
6j1g-assembly1.cif.gz_A crystal structure of hypx from aquifex aeolicus, r9a-q15a-r131a-r542a variant 0.8701 1 60
4egj-assembly5.cif.gz_C-2 crystal structure of d-alanine-d-alanine ligase from burkholderia xenovorans 0.8698 2 321
3r5x-assembly1.cif.gz_B crystal structure of d-alanine--d-alanine ligase from bacillus anthracis complexed with atp 0.8629 1 326
5d8d-assembly1.cif.gz_A crystal structure of d-alanine-d-alanine ligase from acinetobacter baumannii 0.8618 2 319
ID Description Score Start End Superfamily
5d8dD02 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9359 89 319 3.30.470.20
1ehiB02 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9155 180 326 3.30.470.20
5d8dD02 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.8951 89 319 3.30.470.20
1ehiA02 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.8794 183 326 3.30.470.20
5bpfD02 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.874 183 321 3.30.470.20
ID Description Score Start End GO Terms
AF-A0A7J5E9Z2-F1-model_v4 ATP-grasp domain-containing protein 0.9412 81 327 GO:0005524
GO:0008716
GO:0046872
AF-A0A534P7R8-F1-model_v4 ATP-grasp domain-containing protein 0.9402 21 325 GO:0005524
GO:0008716
GO:0046872
AF-A0A7J5E9Z2-F1-model_v4 ATP-grasp domain-containing protein 0.9337 81 327 GO:0005524
GO:0008716
GO:0046872
AF-A0A0G0ZA97-F1-model_v4 D-alanine-D-alanine ligase 0.9331 131 322 GO:0005524
GO:0008716
GO:0046872
AF-A0A7C2P8H8-F1-model_v4 ATP-grasp domain-containing protein 0.9294 1 327 GO:0005524
GO:0008716
GO:0046872

Map