F347621
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 234 | 163 | 468 | 657 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2863067949|2863068764 |
| Length | 718 |
| Sequence | VPRWSDPVAFEPDEDDELPPEIAADLARGGRTERDAPELPVVGKAKHDIPDLPTLLRIAIEAVGGVPRDGQARMAEAVEHSIGSGEHLAVQAGTGTGKSLAYLVPAIRHAVAEGTTVVVSTATIALQRQLVDRDLPRLSTALAEALGRRPTFAILKGRRNYLCLNRVHGNAPAEPDDNALFDAFAASALERQVKRIQEWATETETGDRDELVPGVTDQAWRQLSVTAKECLGVHRCPSGVDCFAERARAEAGRADIVVTNHALLAIDALDDRPVLPDHDVVLVDEAHDLVDRVTSAATGELTAGAVKLAARRCGRVIDEEIADRLNEAAEGLDLVLQAANPGRLEELPQDLGGALTVARDAAWACVNALGPERKEDTDGSTARKLAHALTEEIHDTAVRLLDAFDGDTQHDVVWVSGEPNRPPSIRVAPLGVGGLLRERLFGQRTTVLTSATLALGGSFDTLARQWGLPPQQQAQAVAGMATAKEAPSDTGDQKWTGLDVGSPFEHQRSGILYIARHLPPPGRAGLPPEYLDELTELVQAAGGRTLGLFSSMRAAKQASEELRERLDTPVLCQGDDATALLVRRFAEDAATSLFGTLSLWQGVDVPGDSLQLVVMDRIPFPRPDDPLASARQKAVSERGGNGFITVAGTHAALLLAQGAGRLLRSPRDRGVIAVLDPRLATARYGGFLRASLPPFWTTHDPEVVRGALRRLSAAAAEV |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 2 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 3 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 6 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 11 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 12 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 13 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 14 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 15 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 16 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 17 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 18 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 20 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 21 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 22 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 23 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 24 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 25 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 26 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 27 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 30 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 31 | 3300021358 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 | Metagenome | Rhizosphere |
| 32 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 33 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 34 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300027866 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) | Metagenome | Endosphere |
| 51 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 52 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 53 | 3300030731 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 | Metagenome | Rhizosphere |
| 54 | 3300030733 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 | Metagenome | Rhizosphere |
| 55 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 56 | 3300031838 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM | Metagenome | Unclassified |
| 57 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 58 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 59 | 3300035083 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 | Metagenome | Rhizosphere |
| 60 | 3300035086 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 | Metagenome | Rhizosphere |
| 61 | 3300035089 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 | Metagenome | Rhizosphere |
| 62 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 63 | 3300035116 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 | Metagenome | Rhizosphere |
| 64 | 3300035117 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 | Metagenome | Rhizosphere |
| 65 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 66 | 3300035121 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 | Metagenome | Rhizosphere |
| 67 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 68 | 3300035171 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 | Metagenome | Rhizosphere |
| 69 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 70 | 3300035410 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 71 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 72 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 73 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 74 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 75 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 76 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 77 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 78 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 79 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 80 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 81 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 82 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 83 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 84 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 85 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 86 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 87 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 88 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 89 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 90 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 91 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 92 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046461 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 118 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 119 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 120 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 121 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 122 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 123 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 124 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 125 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 126 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 127 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 128 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 129 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 130 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 131 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 132 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 133 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 134 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 135 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 136 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 137 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 138 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 139 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 140 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 141 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 142 | 2863067949 | Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) | Isolate | Rhizosphere |
| 143 | 2558860112 | Pseudonocardia acaciae DSM 45401 | Isolate | Unclassified |
| 144 | 2558860280 | Kutzneria sp. 744 | Isolate | Unclassified |
| 145 | 2585427649 | Amycolatopsis japonica MG417-CF17, DSM 44213 | Isolate | Unclassified |
| 146 | 2751185734 | Saccharothrix sp. NRRL B-16314 | Isolate | Rhizosphere |
| 147 | 2791354901 | Actinophytocola xanthii 11-183 | Isolate | Rhizosphere |
| 148 | 2795385470 | Labedaea rhizosphaerae DSM 45361 | Isolate | Rhizosphere |
| 149 | 2795385472 | Herbihabitans rhizosphaerae DSM 101727 | Isolate | Rhizosphere |
| 150 | 2808606522 | Amycolatopsis sp. BJA-103 | Isolate | Unclassified |
| 151 | 2866552031 | Saccharopolyspora rhizosphaerae H219 | Isolate | Unclassified |
| 152 | 2866612099 | Amycolatopsis suaedae 8-3EHSu | Isolate | Unclassified |
| 153 | 2867312974 | Micromonospora musae NGC1-4 | Isolate | Unclassified |
| 154 | 2867319477 | Micromonospora musae MS1-9 | Isolate | Unclassified |
| 155 | 2870721527 | Saccharothrix ecbatanensis DSM 45486 | Isolate | Rhizosphere |
| 156 | 2870782633 | Pseudonocardia eucalypti DSM 45351 | Isolate | Unclassified |
| 157 | 2891326441 | Actinokineospora pegani TRM65233 | Isolate | Unclassified |
| 158 | 2899370129 | Amycolatopsis alkalitolerans SYSUP0005 | Isolate | Stem Tuber |
| 159 | 2915358134 | Pseudonocardia pini CAP47R | Isolate | Unclassified |
| 160 | 2915768154 | Amycolatopsis pittospori PIP199 | Isolate | Unclassified |
| 161 | 8047710418 | Umezawaea endophytica DSM 103496 | Isolate | Unclassified |
| 162 | 8054472261 | Pseudonocardia terrae RS11V-5 | Isolate | Rhizosphere |
| 163 | 8056207758 | Saccharopolyspora indica KCTC 29208 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 90.6 |
| Metatranscriptomes | 0 |
| Isolates | 9.4 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 4.27 |
| Nodule | 0 |
| Rhizoplane | 5.56 |
| Rhizosphere | 72.22 |
| Stem | 0 |
| Stem Tuber | 0.43 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25406J46586_10001785 | 3300003203 | Bacteria | 10116 |
| 2 | Ga0070668_100013500 | 3300005347 | Bacteria | 6097 |
| 3 | Ga0070671_100018553 | 3300005355 | Bacteria | 5652 |
| 4 | Ga0070674_100039564 | 3300005356 | Bacteria | 3185 |
| 5 | Ga0070709_10028885 | 3300005434 | Bacteria | 3311 |
| 6 | Ga0070714_100001010 | 3300005435 | Bacteria | 20084 |
| 7 | Ga0070714_100002217 | 3300005435 | Bacteria | 14316 |
| 8 | Ga0070711_100025183 | 3300005439 | Bacteria | 3889 |
| 9 | Ga0070708_100002232 | 3300005445 | Bacteria | 14978 |
| 10 | Ga0070663_100002653 | 3300005455 | Bacteria | 10127 |
| 11 | Ga0070706_100021991 | 3300005467 | Bacteria | 5873 |
| 12 | Ga0070707_100049334 | 3300005468 | Bacteria | 4034 |
| 13 | Ga0070698_100000319 | 3300005471 | Bacteria | 48961 |
| 14 | Ga0070698_100017612 | 3300005471 | Bacteria | 7528 |
| 15 | Ga0068852_100095594 | 3300005616 | Bacteria | 2668 |
| 16 | Ga0068863_100000972 | 3300005841 | Bacteria | 28835 |
| 17 | Ga0081455_10000005 | 3300005937 | Bacteria | 327136 |
| 18 | Ga0081540_1002981 | 3300005983 | Bacteria | 13567 |
| 19 | Ga0081539_10001070 | 3300005985 | Bacteria | 50023 |
| 20 | Ga0070717_10012423 | 3300006028 | Bacteria | 6494 |
| 21 | Ga0075365_10007170 | 3300006038 | Bacteria | 6222 |
| 22 | Ga0075365_10024118 | 3300006038 | Bacteria | 3833 |
| 23 | Ga0075363_100013205 | 3300006048 | Bacteria | 3996 |
| 24 | Ga0075363_100044768 | 3300006048 | Bacteria | 2345 |
| 25 | Ga0075364_10001876 | 3300006051 | Bacteria | 11671 |
| 26 | Ga0070716_100030102 | 3300006173 | Bacteria | 2941 |
| 27 | Ga0070712_100006254 | 3300006175 | Bacteria | 7376 |
| 28 | Ga0075370_10002379 | 3300006353 | Bacteria | 8704 |
| 29 | Ga0075436_100041201 | 3300006914 | Bacteria | 3186 |
| 30 | Ga0111539_10198414 | 3300009094 | Bacteria | 2341 |
| 31 | Ga0105247_10047462 | 3300009101 | Bacteria | 2637 |
| 32 | Ga0105242_10013266 | 3300009176 | Bacteria | 6362 |
| 33 | Ga0163163_10021522 | 3300014325 | Bacteria | 6088 |
| 34 | Ga0157379_10005454 | 3300014968 | Bacteria | 10928 |
| 35 | Ga0213873_10000093 | 3300021358 | Bacteria | 17914 |
| 36 | Ga0213876_10007783 | 3300021384 | Bacteria | 5816 |
| 37 | Ga0213875_10000508 | 3300021388 | Bacteria | 32578 |
| 38 | Ga0213875_10000587 | 3300021388 | Bacteria | 29436 |
| 39 | Ga0213875_10008360 | 3300021388 | Bacteria | 5306 |
| 40 | Ga0213875_10010478 | 3300021388 | Bacteria | 4636 |
| 41 | Ga0213875_10023684 | 3300021388 | Bacteria | 2932 |
| 42 | Ga0207692_10000911 | 3300025898 | Bacteria | 10690 |
| 43 | Ga0207699_10011000 | 3300025906 | Bacteria | 4558 |
| 44 | Ga0207684_10011925 | 3300025910 | Bacteria | 7574 |
| 45 | Ga0207684_10021233 | 3300025910 | Bacteria | 5544 |
| 46 | Ga0207693_10008265 | 3300025915 | Bacteria | 8521 |
| 47 | Ga0207693_10044738 | 3300025915 | Bacteria | 3479 |
| 48 | Ga0207663_10003757 | 3300025916 | Bacteria | 7487 |
| 49 | Ga0207700_10014270 | 3300025928 | Bacteria | 5199 |
| 50 | Ga0207664_10014378 | 3300025929 | Bacteria | 5714 |
| 51 | Ga0207664_10028030 | 3300025929 | Bacteria | 4277 |
| 52 | Ga0207665_10037119 | 3300025939 | Bacteria | 3242 |
| 53 | Ga0207668_10017276 | 3300025972 | Bacteria | 4516 |
| 54 | Ga0207640_10047826 | 3300025981 | Bacteria | 2762 |
| 55 | Ga0207677_10055717 | 3300026023 | Bacteria | 2705 |
| 56 | Ga0207678_10000905 | 3300026067 | Bacteria | 27202 |
| 57 | Ga0207708_10080508 | 3300026075 | Bacteria | 2503 |
| 58 | Ga0207702_10109367 | 3300026078 | Bacteria | 2454 |
| 59 | Ga0207641_10001837 | 3300026088 | Bacteria | 20390 |
| 60 | Ga0207676_10022631 | 3300026095 | Bacteria | 4624 |
| 61 | Ga0209813_10003027 | 3300027866 | Bacteria | 3903 |
| 62 | Ga0307511_10000536 | 3300030521 | Bacteria | 40647 |
| 63 | Ga0307512_10033183 | 3300030522 | Bacteria | 4443 |
| 64 | Ga0316177_1030405 | 3300030731 | Bacteria | 4008 |
| 65 | Ga0314311_1011408 | 3300030733 | Bacteria | 9358 |
| 66 | Ga0307513_10062218 | 3300031456 | Bacteria | 3946 |
| 67 | Ga0307518_10001562 | 3300031838 | Bacteria | 16924 |
| 68 | Ga0307415_100019741 | 3300032126 | Bacteria | 4098 |
| 69 | Ga0307507_10014905 | 3300033179 | Bacteria | 9209 |
| 70 | Ga0307507_10020489 | 3300033179 | Bacteria | 7401 |
| 71 | Ga0307507_10023176 | 3300033179 | Bacteria | 6823 |
| 72 | Ga0373926_0011329 | 3300035083 | Bacteria | 2999 |
| 73 | Ga0373934_0000176 | 3300035086 | Bacteria | 23607 |
| 74 | Ga0373934_0003520 | 3300035086 | Bacteria | 5754 |
| 75 | Ga0373944_0001969 | 3300035089 | Bacteria | 5203 |
| 76 | Ga0373936_0003526 | 3300035113 | Bacteria | 5884 |
| 77 | Ga0373945_0016691 | 3300035116 | Bacteria | 2479 |
| 78 | Ga0373953_0000158 | 3300035117 | Bacteria | 17516 |
| 79 | Ga0373956_0000266 | 3300035119 | Bacteria | 20952 |
| 80 | Ga0373960_0003147 | 3300035121 | Bacteria | 3729 |
| 81 | Ga0373943_0001111 | 3300035170 | Bacteria | 12011 |
| 82 | Ga0373946_0000227 | 3300035171 | Bacteria | 17640 |
| 83 | Ga0373946_0006967 | 3300035171 | Bacteria | 4118 |
| 84 | Ga0373955_0000058 | 3300035172 | Bacteria | 43267 |
| 85 | Ga0373955_0008023 | 3300035172 | Bacteria | 4880 |
| 86 | Ga0373924_0001249 | 3300035410 | Bacteria | 8145 |
| 87 | Ga0373924_0013241 | 3300035410 | Bacteria | 3096 |
| 88 | Ga0373935_0000317 | 3300035692 | Bacteria | 24154 |
| 89 | Ga0373935_0001488 | 3300035692 | Bacteria | 13018 |
| 90 | Ga0373935_0040633 | 3300035692 | Bacteria | 2919 |
| 91 | Ga0373927_0008766 | 3300035695 | Bacteria | 6795 |
| 92 | Ga0373933_0000046 | 3300035724 | Bacteria | 76647 |
| 93 | Ga0373933_0010950 | 3300035724 | Bacteria | 4980 |
| 94 | Ga0373933_0041129 | 3300035724 | Bacteria | 2727 |
| 95 | Ga0373947_0000017 | 3300035725 | Bacteria | 121216 |
| 96 | Ga0373947_0001031 | 3300035725 | Bacteria | 17035 |
| 97 | Ga0373937_0000115 | 3300036401 | Bacteria | 76660 |
| 98 | Ga0373937_0003431 | 3300036401 | Bacteria | 13302 |
| 99 | Ga0373937_0021698 | 3300036401 | Bacteria | 5764 |
| 100 | Ga0373925_0017168 | 3300037068 | Bacteria | 5240 |
| 101 | Ga0373925_0079319 | 3300037068 | Bacteria | 2494 |
| 102 | Ga0436364_0168316 | 3300037853 | Bacteria | 53247 |
| 103 | Ga0436364_0282246 | 3300037853 | Bacteria | 6015 |
| 104 | Ga0436364_0290389 | 3300037853 | Bacteria | 159315 |
| 105 | Ga0436364_0687098 | 3300037853 | Bacteria | 39995 |
| 106 | Ga0436364_1199469 | 3300037853 | Bacteria | 15018 |
| 107 | Ga0436365_1373317 | 3300039437 | Bacteria | 2800 |
| 108 | Ga0436365_1857849 | 3300039437 | Bacteria | 8009 |
| 109 | Ga0436362_0056350 | 3300039453 | Bacteria | 11063 |
| 110 | Ga0466965_0000075 | 3300044683 | Bacteria | 29472 |
| 111 | Ga0466966_0001557 | 3300044684 | Bacteria | 14716 |
| 112 | Ga0466966_0017500 | 3300044684 | Bacteria | 4736 |
| 113 | Ga0466961_0004125 | 3300044693 | Bacteria | 9075 |
| 114 | Ga0466963_0000445 | 3300044694 | Bacteria | 19133 |
| 115 | Ga0466964_0011505 | 3300044706 | Bacteria | 3344 |
| 116 | Ga0466968_0001905 | 3300044735 | Bacteria | 7552 |
| 117 | Ga0466968_0006644 | 3300044735 | Bacteria | 4368 |
| 118 | Ga0466970_0003035 | 3300044765 | Bacteria | 8148 |
| 119 | Ga0466957_0000973 | 3300044842 | Bacteria | 14706 |
| 120 | Ga0466960_0001104 | 3300044901 | Bacteria | 9690 |
| 121 | Ga0466959_0009716 | 3300045049 | Bacteria | 6850 |
| 122 | Ga0466959_0015267 | 3300045049 | Bacteria | 5592 |
| 123 | Ga0466959_0052005 | 3300045049 | Bacteria | 3002 |
| 124 | Ga0466958_0000391 | 3300045836 | Bacteria | 17916 |
| 125 | Ga0466967_0002742 | 3300045976 | Bacteria | 11139 |
| 126 | Ga0466967_0005798 | 3300045976 | Bacteria | 8639 |
| 127 | Ga0466967_0012074 | 3300045976 | Bacteria | 6585 |
| 128 | Ga0495592_0000166 | 3300046454 | Bacteria | 58865 |
| 129 | Ga0495592_0016879 | 3300046454 | Bacteria | 5543 |
| 130 | Ga0495629_0028582 | 3300046459 | Bacteria | 3957 |
| 131 | Ga0495641_0008222 | 3300046461 | Bacteria | 6394 |
| 132 | Ga0495651_0000067 | 3300046462 | Bacteria | 76665 |
| 133 | Ga0495651_0001858 | 3300046462 | Bacteria | 16336 |
| 134 | Ga0495651_0007711 | 3300046462 | Bacteria | 8234 |
| 135 | Ga0495653_0006744 | 3300046463 | Bacteria | 9427 |
| 136 | Ga0495653_0010731 | 3300046463 | Bacteria | 7502 |
| 137 | Ga0495653_0017365 | 3300046463 | Bacteria | 5852 |
| 138 | Ga0495664_0000452 | 3300046477 | Bacteria | 20122 |
| 139 | Ga0495664_0054165 | 3300046477 | Bacteria | 2385 |
| 140 | Ga0495608_0000095 | 3300046511 | Bacteria | 64067 |
| 141 | Ga0495608_0003945 | 3300046511 | Bacteria | 10665 |
| 142 | Ga0495608_0004241 | 3300046511 | Bacteria | 10271 |
| 143 | Ga0495618_0024998 | 3300046514 | Bacteria | 3705 |
| 144 | Ga0495628_0000226 | 3300046516 | Bacteria | 49494 |
| 145 | Ga0495630_0028008 | 3300046517 | Bacteria | 4186 |
| 146 | Ga0495630_0075350 | 3300046517 | Bacteria | 2542 |
| 147 | Ga0495630_0077698 | 3300046517 | Bacteria | 2502 |
| 148 | Ga0495652_0000337 | 3300046529 | Bacteria | 55658 |
| 149 | Ga0495587_0000078 | 3300046536 | Bacteria | 76639 |
| 150 | Ga0495587_0016161 | 3300046536 | Bacteria | 4645 |
| 151 | Ga0495645_0062166 | 3300046543 | Bacteria | 2705 |
| 152 | Ga0495667_0000122 | 3300046559 | Bacteria | 56141 |
| 153 | Ga0495667_0004243 | 3300046559 | Bacteria | 9655 |
| 154 | Ga0495667_0015136 | 3300046559 | Bacteria | 5207 |
| 155 | Ga0495667_0023629 | 3300046559 | Bacteria | 4140 |
| 156 | Ga0495657_0000098 | 3300046675 | Bacteria | 76618 |
| 157 | Ga0495657_0020431 | 3300046675 | Bacteria | 4759 |
| 158 | Ga0495657_0026014 | 3300046675 | Bacteria | 4150 |
| 159 | Ga0495599_0000115 | 3300046678 | Bacteria | 53313 |
| 160 | Ga0495599_0001279 | 3300046678 | Bacteria | 14290 |
| 161 | Ga0495599_0046774 | 3300046678 | Bacteria | 2712 |
| 162 | Ga0495599_0069905 | 3300046678 | Bacteria | 2191 |
| 163 | Ga0495623_0000184 | 3300046679 | Bacteria | 39482 |
| 164 | Ga0495623_0005018 | 3300046679 | Bacteria | 8679 |
| 165 | Ga0495623_0017460 | 3300046679 | Bacteria | 4636 |
| 166 | Ga0495581_0009236 | 3300047315 | Bacteria | 5704 |
| 167 | Ga0495581_0012693 | 3300047315 | Bacteria | 4879 |
| 168 | Ga0495604_0000142 | 3300047317 | Bacteria | 61620 |
| 169 | Ga0495604_0034537 | 3300047317 | Bacteria | 4000 |
| 170 | Ga0495604_0068693 | 3300047317 | Bacteria | 2688 |
| 171 | Ga0495674_0001061 | 3300047319 | Bacteria | 26431 |
| 172 | Ga0495676_0003279 | 3300047321 | Bacteria | 14622 |
| 173 | Ga0495680_0000111 | 3300047322 | Bacteria | 76638 |
| 174 | Ga0495680_0004629 | 3300047322 | Bacteria | 13107 |
| 175 | Ga0495680_0016273 | 3300047322 | Bacteria | 6396 |
| 176 | Ga0495675_0006450 | 3300047444 | Bacteria | 7181 |
| 177 | Ga0495684_0009968 | 3300047471 | Bacteria | 7340 |
| 178 | Ga0495684_0011988 | 3300047471 | Bacteria | 6684 |
| 179 | Ga0495684_0012428 | 3300047471 | Bacteria | 6566 |
| 180 | Ga0495602_0000686 | 3300048088 | Bacteria | 31781 |
| 181 | Ga0495602_0019488 | 3300048088 | Bacteria | 6732 |
| 182 | Ga0495602_0033797 | 3300048088 | Bacteria | 4792 |
| 183 | Ga0495602_0068392 | 3300048088 | Bacteria | 3049 |
| 184 | Ga0496102_0000383 | 3300048905 | Bacteria | 52390 |
| 185 | Ga0496103_0000019 | 3300048906 | Bacteria | 234311 |
| 186 | Ga0496104_0008312 | 3300048907 | Bacteria | 9216 |
| 187 | Ga0496104_0058308 | 3300048907 | Bacteria | 3654 |
| 188 | Ga0496105_0043547 | 3300048908 | Bacteria | 3702 |
| 189 | Ga0496107_0059326 | 3300048910 | Bacteria | 2769 |
| 190 | Ga0496108_0012751 | 3300048911 | Bacteria | 6844 |
| 191 | Ga0496108_0037852 | 3300048911 | Bacteria | 4019 |
| 192 | Ga0496109_0006385 | 3300048912 | Bacteria | 9925 |
| 193 | Ga0496109_0056217 | 3300048912 | Bacteria | 3591 |
| 194 | Ga0496110_0010666 | 3300048913 | Bacteria | 7481 |
| 195 | Ga0496110_0031665 | 3300048913 | Bacteria | 4564 |
| 196 | Ga0496112_0011258 | 3300048915 | Bacteria | 8159 |
| 197 | Ga0496116_0000269 | 3300048919 | Bacteria | 90518 |
| 198 | Ga0496117_0000101 | 3300048920 | Bacteria | 191796 |
| 199 | Ga0496118_0002407 | 3300048921 | Bacteria | 25247 |
| 200 | Ga0496119_0001254 | 3300048922 | Bacteria | 31542 |
| 201 | Ga0496120_0005641 | 3300048923 | Bacteria | 9914 |
| 202 | Ga0496121_0023877 | 3300048924 | Bacteria | 5867 |
| 203 | Ga0496124_0004502 | 3300048927 | Bacteria | 16255 |
| 204 | Ga0496126_0002374 | 3300048929 | Bacteria | 25630 |
| 205 | Ga0501043_0056511 | 3300049579 | Bacteria | 3083 |
| 206 | Ga0501080_0102970 | 3300049742 | Bacteria | 2648 |
| 207 | nmdc:mga03n38_12683_c1 | 3300050490 | Bacteria | 3180 |
| 208 | nmdc:mga0yw44_14352_c1 | 3300050492 | Bacteria | 4205 |
| 209 | nmdc:mga07m45_13164_c1 | 3300050496 | Bacteria | 4382 |
| 210 | nmdc:mga0n895_105490_c1 | 3300050512 | Bacteria | 2831 |
| 211 | Ga0495595_0010265 | 3300053084 | Bacteria | 3889 |
| 212 | Ga0495619_0005447 | 3300053085 | Bacteria | 8067 |
| 213 | 2863068764 | 2863067949 | Bacteria | 8541735 |
| 214 | 2558909024 | 2558860112 | Bacteria | 9931328 |
| 215 | 2559426400 | 2558860280 | Bacteria | 11429938 |
| 216 | 2586058642 | 2585427649 | Bacteria | 9053857 |
| 217 | 2753071610 | 2751185734 | Bacteria | 8863695 |
| 218 | 2791912072 | 2791354901 | Bacteria | 8322202 |
| 219 | 2795784856 | 2795385470 | Bacteria | 8317180 |
| 220 | 2795796601 | 2795385472 | Bacteria | 6627535 |
| 221 | 2809592519 | 2808606522 | Bacteria | 9488490 |
| 222 | 2866553212 | 2866552031 | Bacteria | 5824618 |
| 223 | 2866615775 | 2866612099 | Bacteria | 7543886 |
| 224 | 2867317260 | 2867312974 | Bacteria | 7058875 |
| 225 | 2867323077 | 2867319477 | Bacteria | 7069771 |
| 226 | 2870729429 | 2870721527 | Bacteria | 9689237 |
| 227 | 2870788585 | 2870782633 | Bacteria | 9624083 |
| 228 | 2891327107 | 2891326441 | Bacteria | 6439512 |
| 229 | 2899375888 | 2899370129 | Bacteria | 6781179 |
| 230 | 2915362543 | 2915358134 | Bacteria | 6050864 |
| 231 | 2915774664 | 2915768154 | Bacteria | 8424322 |
| 232 | 8047711241 | 8047710418 | Bacteria | 11023148 |
| 233 | 8054478793 | 8054472261 | Bacteria | 7464355 |
| 234 | 8056215559 | 8056207758 | Bacteria | 8639239 |
| 235 | JGI25406J46586_10001785 | |||
| 236 | Ga0070668_100013500 | |||
| 237 | Ga0070671_100018553 | |||
| 238 | Ga0070674_100039564 | |||
| 239 | Ga0070709_10028885 | |||
| 240 | Ga0070714_100001010 | |||
| 241 | Ga0070714_100002217 | |||
| 242 | Ga0070711_100025183 | |||
| 243 | Ga0070708_100002232 | |||
| 244 | Ga0070663_100002653 | |||
| 245 | Ga0070706_100021991 | |||
| 246 | Ga0070707_100049334 | |||
| 247 | Ga0070698_100000319 | |||
| 248 | Ga0070698_100017612 | |||
| 249 | Ga0068852_100095594 | |||
| 250 | Ga0068863_100000972 | |||
| 251 | Ga0081455_10000005 | |||
| 252 | Ga0081540_1002981 | |||
| 253 | Ga0081539_10001070 | |||
| 254 | Ga0070717_10012423 | |||
| 255 | Ga0075365_10007170 | |||
| 256 | Ga0075365_10024118 | |||
| 257 | Ga0075363_100013205 | |||
| 258 | Ga0075363_100044768 | |||
| 259 | Ga0075364_10001876 | |||
| 260 | Ga0070716_100030102 | |||
| 261 | Ga0070712_100006254 | |||
| 262 | Ga0075370_10002379 | |||
| 263 | Ga0075436_100041201 | |||
| 264 | Ga0111539_10198414 | |||
| 265 | Ga0105247_10047462 | |||
| 266 | Ga0105242_10013266 | |||
| 267 | Ga0163163_10021522 | |||
| 268 | Ga0157379_10005454 | |||
| 269 | Ga0213873_10000093 | |||
| 270 | Ga0213876_10007783 | |||
| 271 | Ga0213875_10000508 | |||
| 272 | Ga0213875_10000587 | |||
| 273 | Ga0213875_10008360 | |||
| 274 | Ga0213875_10010478 | |||
| 275 | Ga0213875_10023684 | |||
| 276 | Ga0207692_10000911 | |||
| 277 | Ga0207699_10011000 | |||
| 278 | Ga0207684_10011925 | |||
| 279 | Ga0207684_10021233 | |||
| 280 | Ga0207693_10008265 | |||
| 281 | Ga0207693_10044738 | |||
| 282 | Ga0207663_10003757 | |||
| 283 | Ga0207700_10014270 | |||
| 284 | Ga0207664_10014378 | |||
| 285 | Ga0207664_10028030 | |||
| 286 | Ga0207665_10037119 | |||
| 287 | Ga0207668_10017276 | |||
| 288 | Ga0207640_10047826 | |||
| 289 | Ga0207677_10055717 | |||
| 290 | Ga0207678_10000905 | |||
| 291 | Ga0207708_10080508 | |||
| 292 | Ga0207702_10109367 | |||
| 293 | Ga0207641_10001837 | |||
| 294 | Ga0207676_10022631 | |||
| 295 | Ga0209813_10003027 | |||
| 296 | Ga0307511_10000536 | |||
| 297 | Ga0307512_10033183 | |||
| 298 | Ga0316177_1030405 | |||
| 299 | Ga0314311_1011408 | |||
| 300 | Ga0307513_10062218 | |||
| 301 | Ga0307518_10001562 | |||
| 302 | Ga0307415_100019741 | |||
| 303 | Ga0307507_10014905 | |||
| 304 | Ga0307507_10020489 | |||
| 305 | Ga0307507_10023176 | |||
| 306 | Ga0373926_0011329 | |||
| 307 | Ga0373934_0000176 | |||
| 308 | Ga0373934_0003520 | |||
| 309 | Ga0373944_0001969 | |||
| 310 | Ga0373936_0003526 | |||
| 311 | Ga0373945_0016691 | |||
| 312 | Ga0373953_0000158 | |||
| 313 | Ga0373956_0000266 | |||
| 314 | Ga0373960_0003147 | |||
| 315 | Ga0373943_0001111 | |||
| 316 | Ga0373946_0000227 | |||
| 317 | Ga0373946_0006967 | |||
| 318 | Ga0373955_0000058 | |||
| 319 | Ga0373955_0008023 | |||
| 320 | Ga0373924_0001249 | |||
| 321 | Ga0373924_0013241 | |||
| 322 | Ga0373935_0000317 | |||
| 323 | Ga0373935_0001488 | |||
| 324 | Ga0373935_0040633 | |||
| 325 | Ga0373927_0008766 | |||
| 326 | Ga0373933_0000046 | |||
| 327 | Ga0373933_0010950 | |||
| 328 | Ga0373933_0041129 | |||
| 329 | Ga0373947_0000017 | |||
| 330 | Ga0373947_0001031 | |||
| 331 | Ga0373937_0000115 | |||
| 332 | Ga0373937_0003431 | |||
| 333 | Ga0373937_0021698 | |||
| 334 | Ga0373925_0017168 | |||
| 335 | Ga0373925_0079319 | |||
| 336 | Ga0436364_0168316 | |||
| 337 | Ga0436364_0282246 | |||
| 338 | Ga0436364_0290389 | |||
| 339 | Ga0436364_0687098 | |||
| 340 | Ga0436364_1199469 | |||
| 341 | Ga0436365_1373317 | |||
| 342 | Ga0436365_1857849 | |||
| 343 | Ga0436362_0056350 | |||
| 344 | Ga0466965_0000075 | |||
| 345 | Ga0466966_0001557 | |||
| 346 | Ga0466966_0017500 | |||
| 347 | Ga0466961_0004125 | |||
| 348 | Ga0466963_0000445 | |||
| 349 | Ga0466964_0011505 | |||
| 350 | Ga0466968_0001905 | |||
| 351 | Ga0466968_0006644 | |||
| 352 | Ga0466970_0003035 | |||
| 353 | Ga0466957_0000973 | |||
| 354 | Ga0466960_0001104 | |||
| 355 | Ga0466959_0009716 | |||
| 356 | Ga0466959_0015267 | |||
| 357 | Ga0466959_0052005 | |||
| 358 | Ga0466958_0000391 | |||
| 359 | Ga0466967_0002742 | |||
| 360 | Ga0466967_0005798 | |||
| 361 | Ga0466967_0012074 | |||
| 362 | Ga0495592_0000166 | |||
| 363 | Ga0495592_0016879 | |||
| 364 | Ga0495629_0028582 | |||
| 365 | Ga0495641_0008222 | |||
| 366 | Ga0495651_0000067 | |||
| 367 | Ga0495651_0001858 | |||
| 368 | Ga0495651_0007711 | |||
| 369 | Ga0495653_0006744 | |||
| 370 | Ga0495653_0010731 | |||
| 371 | Ga0495653_0017365 | |||
| 372 | Ga0495664_0000452 | |||
| 373 | Ga0495664_0054165 | |||
| 374 | Ga0495608_0000095 | |||
| 375 | Ga0495608_0003945 | |||
| 376 | Ga0495608_0004241 | |||
| 377 | Ga0495618_0024998 | |||
| 378 | Ga0495628_0000226 | |||
| 379 | Ga0495630_0028008 | |||
| 380 | Ga0495630_0075350 | |||
| 381 | Ga0495630_0077698 | |||
| 382 | Ga0495652_0000337 | |||
| 383 | Ga0495587_0000078 | |||
| 384 | Ga0495587_0016161 | |||
| 385 | Ga0495645_0062166 | |||
| 386 | Ga0495667_0000122 | |||
| 387 | Ga0495667_0004243 | |||
| 388 | Ga0495667_0015136 | |||
| 389 | Ga0495667_0023629 | |||
| 390 | Ga0495657_0000098 | |||
| 391 | Ga0495657_0020431 | |||
| 392 | Ga0495657_0026014 | |||
| 393 | Ga0495599_0000115 | |||
| 394 | Ga0495599_0001279 | |||
| 395 | Ga0495599_0046774 | |||
| 396 | Ga0495599_0069905 | |||
| 397 | Ga0495623_0000184 | |||
| 398 | Ga0495623_0005018 | |||
| 399 | Ga0495623_0017460 | |||
| 400 | Ga0495581_0009236 | |||
| 401 | Ga0495581_0012693 | |||
| 402 | Ga0495604_0000142 | |||
| 403 | Ga0495604_0034537 | |||
| 404 | Ga0495604_0068693 | |||
| 405 | Ga0495674_0001061 | |||
| 406 | Ga0495676_0003279 | |||
| 407 | Ga0495680_0000111 | |||
| 408 | Ga0495680_0004629 | |||
| 409 | Ga0495680_0016273 | |||
| 410 | Ga0495675_0006450 | |||
| 411 | Ga0495684_0009968 | |||
| 412 | Ga0495684_0011988 | |||
| 413 | Ga0495684_0012428 | |||
| 414 | Ga0495602_0000686 | |||
| 415 | Ga0495602_0019488 | |||
| 416 | Ga0495602_0033797 | |||
| 417 | Ga0495602_0068392 | |||
| 418 | Ga0496102_0000383 | |||
| 419 | Ga0496103_0000019 | |||
| 420 | Ga0496104_0008312 | |||
| 421 | Ga0496104_0058308 | |||
| 422 | Ga0496105_0043547 | |||
| 423 | Ga0496107_0059326 | |||
| 424 | Ga0496108_0012751 | |||
| 425 | Ga0496108_0037852 | |||
| 426 | Ga0496109_0006385 | |||
| 427 | Ga0496109_0056217 | |||
| 428 | Ga0496110_0010666 | |||
| 429 | Ga0496110_0031665 | |||
| 430 | Ga0496112_0011258 | |||
| 431 | Ga0496116_0000269 | |||
| 432 | Ga0496117_0000101 | |||
| 433 | Ga0496118_0002407 | |||
| 434 | Ga0496119_0001254 | |||
| 435 | Ga0496120_0005641 | |||
| 436 | Ga0496121_0023877 | |||
| 437 | Ga0496124_0004502 | |||
| 438 | Ga0496126_0002374 | |||
| 439 | Ga0501043_0056511 | |||
| 440 | Ga0501080_0102970 | |||
| 441 | nmdc:mga03n38_12683_c1 | |||
| 442 | nmdc:mga0yw44_14352_c1 | |||
| 443 | nmdc:mga07m45_13164_c1 | |||
| 444 | nmdc:mga0n895_105490_c1 | |||
| 445 | Ga0495595_0010265 | |||
| 446 | Ga0495619_0005447 | |||
| 447 | 2863068764 | |||
| 448 | 2558909024 | |||
| 449 | 2559426400 | |||
| 450 | 2586058642 | |||
| 451 | 2753071610 | |||
| 452 | 2791912072 | |||
| 453 | 2795784856 | |||
| 454 | 2795796601 | |||
| 455 | 2809592519 | |||
| 456 | 2866553212 | |||
| 457 | 2866615775 | |||
| 458 | 2867317260 | |||
| 459 | 2867323077 | |||
| 460 | 2870729429 | |||
| 461 | 2870788585 | |||
| 462 | 2891327107 | |||
| 463 | 2899375888 | |||
| 464 | 2915362543 | |||
| 465 | 2915774664 | |||
| 466 | 8047711241 | |||
| 467 | 8054478793 | |||
| 468 | 8056215559 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6fwr-assembly1.cif.gz_A | structure of ding in complex with ssdna | 0.7308 | 10 | 658 |
| 7vci-assembly1.cif.gz_O | structure of xenopus laevis npc nuclear ring asymmetric unit | 0.7143 | 276 | 358 |
| 5gi4-assembly1.cif.gz_B | dead-box rna helicase | 0.707 | 468 | 656 |
| 6fwr-assembly1.cif.gz_A | structure of ding in complex with ssdna | 0.7017 | 10 | 658 |
| 7xf0-assembly2.cif.gz_A | crystal strucutre of casding in complex with atp | 0.689 | 26 | 655 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P9WMR5_468_655_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9868 | 483 | 669 | 3.40.50.300 |
| af_P9WMR5_468_655_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9765 | 483 | 669 | 3.40.50.300 |
| af_P76257_437_627_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9173 | 480 | 663 | 3.40.50.300 |
| af_P76257_437_627_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8807 | 480 | 663 | 3.40.50.300 |
| af_P9WMR5_23_298_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8574 | 24 | 293 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A4D4N283-F1-model_v4 | ATP-dependent helicase C-terminal domain-containing protein | 0.9857 | 490 | 676 |
GO:0003676
GO:0003678 GO:0005524 GO:0006139 GO:0016818 |
| AF-J0N9X6-F1-model_v4 | Helicase C-terminal domain protein | 0.9822 | 487 | 672 |
GO:0003676
GO:0004386 GO:0005524 GO:0006139 GO:0016818 |
| AF-A0A7Y4JLT7-F1-model_v4 | deleted | 0.9707 | 529 | 663 |
|
| AF-J0N9X6-F1-model_v4 | Helicase C-terminal domain protein | 0.9668 | 487 | 672 |
GO:0003676
GO:0004386 GO:0005524 GO:0006139 GO:0016818 |
| AF-A0A5C7WWW3-F1-model_v4 | ATP-dependent DNA helicase | 0.9622 | 376 | 672 |
GO:0003676
GO:0003678 GO:0005524 GO:0006139 GO:0016818 |