F347590

General Info

Members Datasets Scaffolds Average Seq Length
234 188 119 251

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2511231119|2511701767
Length 264
Sequence GVTMSKLLESKVALVTGAASGIGLEIAREFAKEGAKVVISDLNEKAVHHAAEELKGQGYEVLPAVCDVTNEEQVEKSFSKTLETFGRMDILVNNAGIQHVSDIENFPTDKFEFMLKLMLTAPFGATKRAFPLMKKQKFGRIINMASINGLIGFAGKAAYCSAKHGLIGLTKVSALEGAEYGITVNALCPGYIDTPLVQNQLQDIAETRGISIEKVFEEVIYPLVPQKRLLAVQEIADYAVFLASDKAKGVTGQAVVMDGGYTAQ

Samples

Sample ID Description Type Environment
1 2511231119 Bacillus velezensis CAU B946 Isolate Rhizosphere
2 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
3 2540341094 Bacillus subtilis XF-1 Isolate Rhizosphere
4 2545555800 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
5 2551306352 Acinetobacter sp. GG2 Isolate Rhizosphere
6 2576861599 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
7 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
8 2593339131 Bacillus sp. UNCCL81 Isolate Unclassified
9 2600255287 Klebsiella quasipneumoniae NFIX11 Isolate Rhizoplane
10 2600255291 Klebsiella quasipneumoniae NFIX19 Isolate Rhizoplane
11 2600255298 Klebsiella quasipneumoniae NFIX21 Isolate Rhizoplane
12 2600255299 Klebsiella quasipneumoniae NFIX22 Isolate Rhizoplane
13 2600255303 Klebsiella quasipneumoniae NFIX36 Isolate Rhizoplane
14 2602042052 Klebsiella quasipneumoniae NFIX18 Isolate Rhizoplane
15 2602042053 Klebsiella quasipneumoniae NFIX12 Isolate Rhizoplane
16 2602042109 Klebsiella aerogenes NFIX39 Isolate Rhizoplane
17 2602042111 Klebsiella quasipneumoniae NFIX20 Isolate Rhizoplane
18 2603880184 Klebsiella quasipneumoniae NFIX27 Isolate Rhizoplane
19 2630968484 Bacillus methylotrophicus KACC 13105 Isolate Rhizosphere
20 2639762793 Acinetobacter calcoaceticus GK1 Isolate Rhizosphere
21 2643221665 Acinetobacter sp. Root1280 Isolate Unclassified
22 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
23 2643221731 Bacillus sp. Root147 Isolate Unclassified
24 2643221732 Bacillus sp. Root239 Isolate Unclassified
25 2648501850 Bacillus amyloliquefaciens RHNK22 Isolate Rhizosphere
26 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
27 2671180844 Bacillus amyloliquefaciens Bs006 Isolate Unclassified
28 2675903507 Acinetobacter calcoaceticus GK2 Isolate Unclassified
29 2695420354 Bacillus sp. Co1-6 Isolate Unclassified
30 2716884898 Bacillus methylotrophicus FKM10 Isolate Rhizosphere
31 2738541295 Bacillus sp. OK085 Isolate Unclassified
32 2738541299 Paenisporosarcina sp. OV554 Isolate Unclassified
33 2744054655 Acinetobacter sp. BMW17 Isolate Unclassified
34 2757320391 Bacillus sp. NFR08 Isolate Rhizoplane
35 2773857761 Acinetobacter sp. 3664 Isolate Unclassified
36 2773857770 Acinetobacter sp. 3636 Isolate Unclassified
37 2775507074 Klebsiella sp. D5A Isolate Unclassified
38 2775507192 Bacillus sp. AFS041924 Isolate Unclassified
39 2808606399 Bacillus sp. SJZ110 Isolate Rhizosphere
40 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
41 2818991465 Priestia megaterium 3291 Isolate Rhizosphere
42 2842682962 Bacillus sp. R-72492 Isolate Unclassified
43 2842882022 Bacillus sp. R-71893 Isolate Unclassified
44 2849139964 Bacillus sp. R-71875 Isolate Unclassified
45 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
46 2857581216 Bacillus sp. R-71922 Isolate Unclassified
47 2857586860 Bacillus sp. R-71935 Isolate Unclassified
48 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
49 2857604169 Domibacillus sp. R-71921 Isolate Unclassified
50 2860837431 Bacillus sp. WR11 Isolate Unclassified
51 2877768649 Bacillus amyloliquefaciens Y14 Isolate Rhizosphere
52 2880169592 Bacillus velezensis T20E-257 Isolate Unclassified
53 2888373701 Serratia rhizosphaerae KUDC3025 Isolate Rhizosphere
54 2897109615 Bacillus amyloliquefaciens YP6 Isolate Unclassified
55 2904513164 Klebsiella variicola 1431 Isolate Rhizosphere
56 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
57 2904560550 Bacillus velezensis 1780 Isolate Rhizosphere
58 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
59 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
60 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
61 2916699645 Acinetobacter ursingii M3 Isolate Unclassified
62 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
63 2919182534 Acinetobacter calcoaceticus 2589 Isolate Rhizosphere
64 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
65 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
66 2919720352 Priestia megaterium 4340 Isolate Unclassified
67 2928093941 Priestia aryabhattai 1389 Isolate Rhizosphere
68 2928515477 Acinetobacter bereziniae 1375 Isolate Rhizosphere
69 2929004312 Priestia megaterium 1104 Isolate Unclassified
70 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
71 2936340661 Gottfriedia acidiceleris 1-17 Isolate Rhizosphere
72 2936361878 Neobacillus endophyticus BRMEA1 Isolate Unclassified
73 2939573065 Citrobacter sp. 506 Isolate Rhizosphere
74 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
75 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
76 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
77 2964375228 Anaerobacillus alkaliphilus B16-10 Isolate Rhizosphere
78 2969136845 Bacillus subtilis TLO3 Isolate Rhizosphere
79 2969141011 Bacillus velezensis MH25 Isolate Unclassified
80 2969765954 Bacillus intestinalis GM2 Isolate Rhizosphere
81 2969770375 Bacillus subtilis GM5 Isolate Rhizosphere
82 2971893375 Bacillus sp. HNA3 Isolate Rhizosphere
83 2977254563 Bacillus sp. SORGH_AS 510 Isolate Unclassified
84 2980492589 Bacillus subtilis GQJK2 Isolate Rhizosphere
85 2984568884 Acinetobacter baylyi SORGH_AS893 Isolate Aerial Root
86 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified
87 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
88 3006826541 Bacillus haikouensis CrR16 Isolate Unclassified
89 3006879489 Bacillus atrophaeus UCMB-5137 Isolate Rhizosphere
90 3006973921 Bacillus sp. FJAT-49736 Isolate Rhizosphere
91 3006978542 Bacillus sp. FJAT-49705 Isolate Rhizosphere
92 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
93 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
94 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
95 3300005272 Switchgrass rhizosphere microbial communities from Buena Vista Grasslands Wildlife Area, Michigan, USA - BV2.1 v1 Metagenome Rhizosphere
96 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
97 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
98 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
99 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
100 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
101 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
102 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
103 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
104 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
105 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
106 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
107 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
108 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
109 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
110 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
111 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
112 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
113 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
114 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
115 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
116 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
117 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
118 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
119 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
120 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
121 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
122 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
135 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
136 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
137 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
139 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
140 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
141 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
142 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
143 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
144 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
145 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
146 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
147 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
148 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
149 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
150 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
151 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
152 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
153 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
154 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
155 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
156 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
157 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
158 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
159 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
160 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
161 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
162 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
163 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
164 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
165 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
166 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
167 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
168 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
169 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
170 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
171 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
172 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
173 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
174 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
175 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
176 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
177 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
178 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
179 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
180 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
181 8022630665 Bacillus sp. PW192 Isolate Rhizosphere
182 8022653035 Bacillus sp. Rc4 Isolate Unclassified
183 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
184 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified
185 8022948649 Bacillus endophyticus FH5 Isolate Rhizosphere
186 8051952484 Bacillus amyloliquefaciens K2 Isolate Rhizosphere
187 8052174270 Bacillus velezensis CH13 Isolate Rhizosphere
188 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 50
Metatranscriptomes 0.85
Isolates 49.15

Biome Distribution

Category Percentage (%)
Aerial Root 0.43
Bulb 0
Endosphere 5.13
Nodule 1.28
Rhizoplane 9.4
Rhizosphere 59.83
Stem 0
Stem Tuber 0
Unclassified 23.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10000302 3300003187 Bacteria 54102
2 JGI25151J46595_10053894 3300003187 Unclassified 1339
3 JGI25151J46595_10054406 3300003187 Bacteria 1327
4 Ga0055532_1000060 3300003758 Bacteria 150321
5 Ga0055536_1004263 3300003781 Bacteria 7377
6 Ga0065703_1000186 3300005272 Bacteria 19273
7 Ga0065704_10008281 3300005289 Bacteria 2131
8 Ga0065704_10012347 3300005289 Bacteria 1600
9 Ga0070680_100014763 3300005336 Bacteria 6109
10 Ga0070673_100129903 3300005364 Bacteria 2112
11 Ga0070708_100052828 3300005445 Bacteria 3604
12 Ga0070707_100290139 3300005468 Bacteria 1589
13 Ga0070698_100372352 3300005471 Bacteria 1360
14 Ga0070699_100287920 3300005518 Bacteria 1472
15 Ga0070679_100000506 3300005530 Bacteria 33193
16 Ga0070665_100265437 3300005548 Bacteria 1718
17 Ga0068855_100011565 3300005563 Bacteria 10659
18 Ga0068856_100739226 3300005614 Archaea 1004
19 Ga0079104_1000062 3300006946 Bacteria 160162
20 Ga0105251_10000086 3300009011 Bacteria 88725
21 Ga0105244_10000463 3300009036 Bacteria 37089
22 Ga0105244_10007365 3300009036 Bacteria 6994
23 Ga0105244_10011256 3300009036 Bacteria 5381
24 Ga0105244_10018744 3300009036 Bacteria 3876
25 Ga0105250_10000236 3300009092 Bacteria 46311
26 Ga0105250_10048555 3300009092 Bacteria 1702
27 Ga0105247_10046641 3300009101 Bacteria 2660
28 Ga0105243_10000005 3300009148 Bacteria 576265
29 Ga0105249_10000952 3300009553 Bacteria 25606
30 Ga0157371_10004198 3300013102 Bacteria 12690
31 Ga0157371_10021655 3300013102 Bacteria 4717
32 Ga0157371_10152274 3300013102 Bacteria 1650
33 Ga0157370_10143449 3300013104 Bacteria 2224
34 Ga0157369_10051749 3300013105 Bacteria 4444
35 Ga0157372_10001341 3300013307 Bacteria 26632
36 Ga0163161_10001835 3300017792 Bacteria 15515
37 Ga0163161_10070471 3300017792 Bacteria 2556
38 Ga0163161_10247816 3300017792 Bacteria 1388
39 Ga0209147_100080 3300025229 Bacteria 196308
40 Ga0209676_1000427 3300025292 Bacteria 73627
41 Ga0209025_1000262 3300025294 Bacteria 123617
42 Ga0209025_1002164 3300025294 Bacteria 21874
43 Ga0209025_1004102 3300025294 Bacteria 12975
44 Ga0209025_1005174 3300025294 Bacteria 10787
45 Ga0209025_1028111 3300025294 Bacteria 2767
46 Ga0207696_1000005 3300025711 Bacteria 642078
47 Ga0207655_1000490 3300025728 Bacteria 50941
48 Ga0207655_1001848 3300025728 Bacteria 18290
49 Ga0207655_1002379 3300025728 Bacteria 15336
50 Ga0207655_1058168 3300025728 Bacteria 1513
51 Ga0207655_1087296 3300025728 Bacteria 1107
52 Ga0207713_1000002 3300025735 Bacteria 1061749
53 Ga0207713_1020508 3300025735 Bacteria 3200
54 Ga0207710_10003111 3300025900 Bacteria 7435
55 Ga0207705_10015659 3300025909 Bacteria 5444
56 Ga0207684_10446010 3300025910 Bacteria 1111
57 Ga0207660_10014788 3300025917 Bacteria 5142
58 Ga0207652_10000499 3300025921 Bacteria 39843
59 Ga0207709_10000001 3300025935 Bacteria 2228154
60 Ga0207709_10021068 3300025935 Bacteria 3686
61 Ga0207667_10019775 3300025949 Bacteria 7507
62 Ga0207651_10505623 3300025960 Bacteria 1045
63 Ga0207712_10010727 3300025961 Bacteria 5822
64 Ga0209281_1000001 3300027111 Bacteria 1933496
65 Ga0209371_1000006 3300027312 Bacteria 1055642
66 Ga0209371_1001309 3300027312 Bacteria 17426
67 Ga0209974_10070522 3300027876 Unclassified 1192
68 Ga0268266_10301304 3300028379 Bacteria 1495
69 Ga0268256_1000007 3300030500 Bacteria 1055326
70 Ga0268256_1001109 3300030500 Bacteria 17529
71 Ga0265327_10000168 3300031251 Bacteria 141392
72 Ga0307416_100587215 3300032002 Bacteria 1192
73 Ga0395900_0021203 3300037418 Bacteria 6643
74 Ga0395898_0060421 3300037466 Bacteria 3683
75 Ga0439466_0017790 3300041411 Bacteria 2556
76 Ga0439465_0040557 3300041413 Bacteria 1505
77 Ga0495627_005250 3300046453 Bacteria 5254
78 Ga0495590_0042659 3300046457 Bacteria 1582
79 Ga0495638_0174371 3300046460 Bacteria 1231
80 Ga0495650_0002479 3300046471 Bacteria 14859
81 Ga0495605_0136095 3300046474 Bacteria 1105
82 Ga0495607_0052300 3300046501 Bacteria 2367
83 Ga0495607_0153857 3300046501 Bacteria 1174
84 Ga0495583_0171334 3300046506 Unclassified 892
85 Ga0495620_0122660 3300046515 Bacteria 1023
86 Ga0495632_0000143 3300046519 Bacteria 73460
87 Ga0495643_0010262 3300046522 Bacteria 5768
88 Ga0495663_0009985 3300046525 Bacteria 2634
89 Ga0495654_0089759 3300046530 Bacteria 1428
90 Ga0495654_0106270 3300046530 Bacteria 1286
91 Ga0495633_0047239 3300046558 Bacteria 2035
92 Ga0495611_0000050 3300046648 Bacteria 84026
93 Ga0495625_0027780 3300046660 Bacteria 4253
94 Ga0495625_0044292 3300046660 Bacteria 3223
95 Ga0495625_0153322 3300046660 Unclassified 1548
96 Ga0495679_041486 3300047446 Bacteria 1425
97 Ga0496102_0014398 3300048905 Bacteria 6872
98 Ga0496103_0076824 3300048906 Bacteria 2096
99 Ga0496104_0010633 3300048907 Bacteria 8224
100 Ga0496105_0027300 3300048908 Bacteria 4662
101 Ga0496106_0435783 3300048909 Bacteria 1053
102 Ga0496108_0178648 3300048911 Bacteria 1838
103 Ga0496109_0094075 3300048912 Bacteria 2774
104 Ga0496110_0047275 3300048913 Bacteria 3767
105 Ga0496110_0645504 3300048913 Bacteria 958
106 Ga0496111_0012670 3300048914 Bacteria 5714
107 Ga0496113_0066490 3300048916 Bacteria 2731
108 Ga0496117_0004530 3300048920 Bacteria 15240
109 Ga0496118_0010456 3300048921 Bacteria 9190
110 Ga0496119_0000954 3300048922 Bacteria 37221
111 Ga0496120_0001137 3300048923 Bacteria 34321
112 Ga0496123_0045822 3300048926 Bacteria 2974
113 Ga0496126_0059815 3300048929 Bacteria 3430
114 Ga0496126_0352929 3300048929 Bacteria 1202
115 Ga0501305_024247 3300049161 Bacteria 913
116 Ga0495682_0007467 3300049460 Bacteria 4343
117 Ga0501312_024559 3300049528 Bacteria 914
118 Ga0501217_054107 3300049661 Bacteria 1056
119 Ga0501217_077378 3300049661 Unclassified 915

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2919720352 2919720961 194
2 iso_pu_bacteria 2600255287 2601643266 217
3 iso_pu_bacteria 2600255291 2601663087 217
4 iso_pu_bacteria 2600255298 2601696046 217
5 iso_pu_bacteria 2600255299 2601700720 217
6 iso_pu_bacteria 2600255303 2601721071 217
7 iso_pu_bacteria 2602042052 2603660467 217
8 iso_pu_bacteria 2602042053 2603665742 217
9 iso_pu_bacteria 2602042109 2603867192 217
10 iso_pu_bacteria 2602042111 2603875231 217
11 iso_pu_bacteria 2603880184 2606070173 217
12 iso_pu_bacteria 2775507074 2777024545 217
13 iso_pu_bacteria 2888373701 2888374363 217
14 iso_pu_bacteria 2904513164 2904513199 217
15 iso_pu_bacteria 2939573065 2939577337 217
16 3300031251 Ga0265327_10000168 Ga0265327_1000016843 218
17 3300006946 Ga0079104_1000062 Ga0079104_1000062108 221
18 3300009011 Ga0105251_10000086 Ga0105251_1000008667 221
19 3300009036 Ga0105244_10007365 Ga0105244_100073653 221
20 3300009092 Ga0105250_10000236 Ga0105250_1000023633 221
21 3300025711 Ga0207696_1000005 Ga0207696_10000055 221
22 3300025735 Ga0207713_1000002 Ga0207713_1000002276 221
23 3300025935 Ga0207709_10021068 Ga0207709_100210683 221
24 3300027111 Ga0209281_1000001 Ga0209281_1000001406 221
25 3300027312 Ga0209371_1001309 Ga0209371_10013092 221
26 3300030500 Ga0268256_1001109 Ga0268256_10011093 221
27 3300048929 Ga0496126_0352929 Ga0496126_0352929_90_836 221
28 3300046471 Ga0495650_0002479 Ga0495650_0002479_5571_6320 222
29 3300047446 Ga0495679_041486 Ga0495679_041486_45_794 222
30 3300048907 Ga0496104_0010633 Ga0496104_0010633_3538_4287 222
31 3300048908 Ga0496105_0027300 Ga0496105_0027300_2669_3418 222
32 3300048920 Ga0496117_0004530 Ga0496117_0004530_11884_12633 222
33 3300048921 Ga0496118_0010456 Ga0496118_0010456_4341_5090 222
34 3300048922 Ga0496119_0000954 Ga0496119_0000954_15292_16041 222
35 3300048923 Ga0496120_0001137 Ga0496120_0001137_18304_19053 222
36 3300048926 Ga0496123_0045822 Ga0496123_0045822_687_1436 222
37 3300048929 Ga0496126_0059815 Ga0496126_0059815_2150_2899 222
38 iso_pu_bacteria 2738541299 2738840568 230
39 3300025294 Ga0209025_1002164 Ga0209025_10021647 232
40 iso_pu_bacteria 2808606399 2809053972 232
41 iso_pu_bacteria 2860837431 2860841656 232
42 iso_pu_bacteria 2969136845 2969140804 232
43 iso_pu_bacteria 2969765954 2969770132 232
44 iso_pu_bacteria 2969770375 2969770716 232
45 iso_pu_bacteria 2980492589 2980496653 232
46 iso_pu_bacteria 8022653035 8022653112 232
47 3300005471 Ga0070698_100372352 Ga0070698_1003723522 233
48 iso_pu_bacteria 2643221731 2644717970 233
49 iso_pu_bacteria 2643221732 2644724867 233
50 iso_pu_bacteria 2671180330 2672337676 233
51 iso_pu_bacteria 2738541295 2738817446 233
52 iso_pu_bacteria 2816332186 2816861938 233
53 iso_pu_bacteria 2818991465 2819707130 233
54 iso_pu_bacteria 2842682962 2842686787 233
55 iso_pu_bacteria 2842882022 2842882557 233
56 iso_pu_bacteria 2849139964 2849141735 233
57 iso_pu_bacteria 2857581216 2857583810 233
58 iso_pu_bacteria 2857604169 2857606614 233
59 iso_pu_bacteria 2904524088 2904526777 233
60 iso_pu_bacteria 2919143609 2919144631 233
61 iso_pu_bacteria 2919517244 2919519822 233
62 iso_pu_bacteria 2928093941 2928095290 233
63 iso_pu_bacteria 2929004312 2929009007 233
64 iso_pu_bacteria 2960319331 2960324948 233
65 iso_pu_bacteria 2960375949 2960377508 233
66 iso_pu_bacteria 3006826541 3006826966 233
67 iso_pu_bacteria 3006978542 3006982269 233
68 iso_pu_bacteria 8022893055 8022897289 233
69 iso_pu_bacteria 8022914991 8022919025 233
70 iso_pu_bacteria 8022948649 8022951646 233
71 3300013102 Ga0157371_10152274 Ga0157371_101522742 234
72 iso_pu_bacteria 2964375228 2964376724 234
73 3300027876 Ga0209974_10070522 Ga0209974_100705222 235
74 iso_pu_bacteria 2540341094 2540608826 235
75 3300025294 Ga0209025_1028111 Ga0209025_10281112 236
76 3300032002 Ga0307416_100587215 Ga0307416_1005872151 236
77 3300041413 Ga0439465_0040557 Ga0439465_0040557_667_1440 236
78 3300046506 Ga0495583_0171334 Ga0495583_0171334_82_855 236
79 3300046515 Ga0495620_0122660 Ga0495620_0122660_228_1004 236
80 3300046648 Ga0495611_0000050 Ga0495611_0000050_81701_82474 236
81 3300046660 Ga0495625_0044292 Ga0495625_0044292_1743_2516 236
82 3300046660 Ga0495625_0153322 Ga0495625_0153322_543_1316 236
83 3300048911 Ga0496108_0178648 Ga0496108_0178648_166_942 236
84 3300048912 Ga0496109_0094075 Ga0496109_0094075_1613_2389 236
85 3300048913 Ga0496110_0047275 Ga0496110_0047275_2228_3004 236
86 3300048914 Ga0496111_0012670 Ga0496111_0012670_3944_4720 236
87 3300049161 Ga0501305_024247 Ga0501305_024247_21_797 236
88 3300049528 Ga0501312_024559 Ga0501312_024559_27_803 236
89 iso_pu_bacteria 2511231119 2511699723 236
90 iso_pu_bacteria 2512564013 2512639308 236
91 iso_pu_bacteria 2545555800 2545555823 236
92 iso_pu_bacteria 2551306352 2552749291 236
93 iso_pu_bacteria 2576861599 2578929240 236
94 iso_pu_bacteria 2585428059 2587740066 236
95 iso_pu_bacteria 2593339131 2595091380 236
96 iso_pu_bacteria 2630968484 2631983029 236
97 iso_pu_bacteria 2639762793 2640734242 236
98 iso_pu_bacteria 2643221665 2644362427 236
99 iso_pu_bacteria 2643221676 2644422431 236
100 iso_pu_bacteria 2648501850 2651533143 236
101 iso_pu_bacteria 2671180844 2674419429 236
102 iso_pu_bacteria 2671180844 2674421276 236
103 iso_pu_bacteria 2675903507 2678231218 236
104 iso_pu_bacteria 2695420354 2695627683 236
105 iso_pu_bacteria 2716884898 2717914573 236
106 iso_pu_bacteria 2716884898 2717916520 236
107 iso_pu_bacteria 2744054655 2745161340 236
108 iso_pu_bacteria 2757320391 2757566731 236
109 iso_pu_bacteria 2773857761 2774388222 236
110 iso_pu_bacteria 2773857770 2774437430 236
111 iso_pu_bacteria 2775507192 2777839575 236
112 iso_pu_bacteria 2857465823 2857472306 236
113 iso_pu_bacteria 2857586860 2857588013 236
114 iso_pu_bacteria 2857591370 2857597741 236
115 iso_pu_bacteria 2877768649 2877770526 236
116 iso_pu_bacteria 2877768649 2877772667 236
117 iso_pu_bacteria 2880169592 2880171511 236
118 iso_pu_bacteria 2880169592 2880173511 236
119 iso_pu_bacteria 2897109615 2897111532 236
120 iso_pu_bacteria 2904560550 2904561248 236
121 iso_pu_bacteria 2904560550 2904563396 236
122 iso_pu_bacteria 2904755435 2904756343 236
123 iso_pu_bacteria 2915597211 2915598865 236
124 iso_pu_bacteria 2915606848 2915608975 236
125 iso_pu_bacteria 2916699645 2916699724 236
126 iso_pu_bacteria 2919143609 2919149473 236
127 iso_pu_bacteria 2919182534 2919184149 236
128 iso_pu_bacteria 2919414237 2919418955 236
129 iso_pu_bacteria 2919517244 2919522914 236
130 iso_pu_bacteria 2919720352 2919726524 236
131 iso_pu_bacteria 2928515477 2928516582 236
132 iso_pu_bacteria 2929183550 2929183987 236
133 iso_pu_bacteria 2936340661 2936345168 236
134 iso_pu_bacteria 2936361878 2936363459 236
135 iso_pu_bacteria 2956897341 2956902673 236
136 iso_pu_bacteria 2969141011 2969142981 236
137 iso_pu_bacteria 2969141011 2969145244 236
138 iso_pu_bacteria 2971893375 2971895293 236
139 iso_pu_bacteria 2977254563 2977259523 236
140 iso_pu_bacteria 2984568884 2984570287 236
141 iso_pu_bacteria 2990275345 2990275390 236
142 iso_pu_bacteria 3001892409 3001898724 236
143 iso_pu_bacteria 3006879489 3006883341 236
144 iso_pu_bacteria 3006973921 3006974297 236
145 iso_pu_bacteria 8022630665 8022631136 236
146 iso_pu_bacteria 8051952484 8051952535 236
147 iso_pu_bacteria 8052174270 8052174922 236
148 iso_pu_bacteria 8054280661 8054284711 236
149 3300003187 JGI25151J46595_10053894 JGI25151J46595_100538941 237
150 3300003187 JGI25151J46595_10054406 JGI25151J46595_100544061 237
151 3300003781 Ga0055536_1004263 Ga0055536_10042636 237
152 3300005336 Ga0070680_100014763 Ga0070680_1000147633 237
153 3300005530 Ga0070679_100000506 Ga0070679_1000005062 237
154 3300005563 Ga0068855_100011565 Ga0068855_1000115655 237
155 3300005614 Ga0068856_100739226 Ga0068856_1007392262 237
156 3300013102 Ga0157371_10021655 Ga0157371_100216554 237
157 3300013105 Ga0157369_10051749 Ga0157369_100517491 237
158 3300013307 Ga0157372_10001341 Ga0157372_1000134119 237
159 3300025292 Ga0209676_1000427 Ga0209676_100042743 237
160 3300025294 Ga0209025_1004102 Ga0209025_10041022 237
161 3300025294 Ga0209025_1005174 Ga0209025_10051749 237
162 3300025909 Ga0207705_10015659 Ga0207705_100156593 237
163 3300025917 Ga0207660_10014788 Ga0207660_100147883 237
164 3300025921 Ga0207652_10000499 Ga0207652_100004991 237
165 3300025949 Ga0207667_10019775 Ga0207667_100197755 237
166 3300049661 Ga0501217_077378 Ga0501217_077378_127_903 237
167 3300003187 JGI25151J46595_10000302 JGI25151J46595_100003025 240
168 3300003758 Ga0055532_1000060 Ga0055532_100006011 240
169 3300005272 Ga0065703_1000186 Ga0065703_100018620 240
170 3300005289 Ga0065704_10008281 Ga0065704_100082812 240
171 3300005289 Ga0065704_10012347 Ga0065704_100123471 240
172 3300005364 Ga0070673_100129903 Ga0070673_1001299031 240
173 3300005445 Ga0070708_100052828 Ga0070708_1000528283 240
174 3300005468 Ga0070707_100290139 Ga0070707_1002901391 240
175 3300005518 Ga0070699_100287920 Ga0070699_1002879202 240
176 3300005548 Ga0070665_100265437 Ga0070665_1002654371 240
177 3300009036 Ga0105244_10000463 Ga0105244_1000046345 240
178 3300009036 Ga0105244_10011256 Ga0105244_100112566 240
179 3300009036 Ga0105244_10018744 Ga0105244_100187441 240
180 3300009092 Ga0105250_10048555 Ga0105250_100485552 240
181 3300009101 Ga0105247_10046641 Ga0105247_100466412 240
182 3300009148 Ga0105243_10000005 Ga0105243_10000005339 240
183 3300009553 Ga0105249_10000952 Ga0105249_100009525 240
184 3300013102 Ga0157371_10004198 Ga0157371_100041982 240
185 3300013104 Ga0157370_10143449 Ga0157370_101434492 240
186 3300017792 Ga0163161_10001835 Ga0163161_100018354 240
187 3300017792 Ga0163161_10070471 Ga0163161_100704712 240
188 3300017792 Ga0163161_10247816 Ga0163161_102478162 240
189 3300025229 Ga0209147_100080 Ga0209147_100080140 240
190 3300025294 Ga0209025_1000262 Ga0209025_1000262145 240
191 3300025728 Ga0207655_1000490 Ga0207655_10004904 240
192 3300025728 Ga0207655_1001848 Ga0207655_10018484 240
193 3300025728 Ga0207655_1002379 Ga0207655_100237913 240
194 3300025728 Ga0207655_1058168 Ga0207655_10581682 240
195 3300025728 Ga0207655_1087296 Ga0207655_10872962 240
196 3300025735 Ga0207713_1020508 Ga0207713_10205082 240
197 3300025900 Ga0207710_10003111 Ga0207710_100031115 240
198 3300025910 Ga0207684_10446010 Ga0207684_104460102 240
199 3300025935 Ga0207709_10000001 Ga0207709_100000011088 240
200 3300025960 Ga0207651_10505623 Ga0207651_105056231 240
201 3300025961 Ga0207712_10010727 Ga0207712_100107274 240
202 3300027312 Ga0209371_1000006 Ga0209371_1000006225 240
203 3300028379 Ga0268266_10301304 Ga0268266_103013042 240
204 3300030500 Ga0268256_1000007 Ga0268256_1000007225 240
205 3300037418 Ga0395900_0021203 Ga0395900_0021203_2198_2983 240
206 3300037466 Ga0395898_0060421 Ga0395898_0060421_2513_3298 240
207 3300041411 Ga0439466_0017790 Ga0439466_0017790_1347_2132 240
208 3300046453 Ga0495627_005250 Ga0495627_005250_3135_3920 240
209 3300046457 Ga0495590_0042659 Ga0495590_0042659_57_842 240
210 3300046460 Ga0495638_0174371 Ga0495638_0174371_373_1158 240
211 3300046474 Ga0495605_0136095 Ga0495605_0136095_290_1075 240
212 3300046501 Ga0495607_0052300 Ga0495607_0052300_245_1030 240
213 3300046501 Ga0495607_0153857 Ga0495607_0153857_245_1030 240
214 3300046519 Ga0495632_0000143 Ga0495632_0000143_72310_73095 240
215 3300046522 Ga0495643_0010262 Ga0495643_0010262_1230_2015 240
216 3300046525 Ga0495663_0009985 Ga0495663_0009985_382_1167 240
217 3300046530 Ga0495654_0089759 Ga0495654_0089759_311_1096 240
218 3300046530 Ga0495654_0106270 Ga0495654_0106270_112_897 240
219 3300046558 Ga0495633_0047239 Ga0495633_0047239_884_1669 240
220 3300046660 Ga0495625_0027780 Ga0495625_0027780_2924_3709 240
221 3300048905 Ga0496102_0014398 Ga0496102_0014398_787_1572 240
222 3300048906 Ga0496103_0076824 Ga0496103_0076824_819_1604 240
223 3300048909 Ga0496106_0435783 Ga0496106_0435783_210_995 240
224 3300048913 Ga0496110_0645504 Ga0496110_0645504_97_882 240
225 3300048916 Ga0496113_0066490 Ga0496113_0066490_1452_2237 240
226 3300049460 Ga0495682_0007467 Ga0495682_0007467_665_1450 240
227 3300049661 Ga0501217_054107 Ga0501217_054107_58_843 240
228 iso_pu_bacteria 2511231119 2511701767 240
229 iso_pu_bacteria 2630968484 2631985549 240
230 iso_pu_bacteria 2648501850 2651531374 240
231 iso_pu_bacteria 2695420354 2695629734 240
232 iso_pu_bacteria 2971893375 2971897370 240
233 iso_pu_bacteria 8022630665 8022632884 240
234 iso_pu_bacteria 8052174270 8052178083 240

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

11

205

0.99

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

17

262

0.91

PF08659

KR

KR domain

12

185

0.87

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

13

114

0.85

PF23441

4

263

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
6zzq-assembly1.cif.gz_A crystal structure of (r)-3-hydroxybutyrate dehydrogenase from acinetobacter baumannii complexed with nad+ and acetoacetate 0.8745 3 240
3qiv-assembly1.cif.gz_B crystal structure of a putative short-chain dehydrogenase or 3-oxoacyl-[acyl-carrier-protein] reductase from mycobacterium paratuberculosis atcc baa-968 / k-10 0.8739 4 233
3qiv-assembly1.cif.gz_B crystal structure of a putative short-chain dehydrogenase or 3-oxoacyl-[acyl-carrier-protein] reductase from mycobacterium paratuberculosis atcc baa-968 / k-10 0.8654 4 233
6zzq-assembly1.cif.gz_A crystal structure of (r)-3-hydroxybutyrate dehydrogenase from acinetobacter baumannii complexed with nad+ and acetoacetate 0.8641 3 240
6zzs-assembly2.cif.gz_E-2 crystal structure of (r)-3-hydroxybutyrate dehydrogenase from acinetobacter baumannii complexed with nad+ and 3-oxovalerate 0.863 3 240
ID Description Score Start End Superfamily
af_C6T421_12_106_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9823 3 83 3.40.50.720
af_A0A0R0HUJ2_8_65_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9502 8 54 3.40.50.720
af_K7MUD1_29_120_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9418 7 88 3.40.50.720
af_Q0JBH4_12_100_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.928 8 88 3.40.50.720
af_A0A0P0X9U1_21_128_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9103 2 104 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2V6HKD1-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9733 2 142 GO:0016491
AF-A0A357VTT0-F1-model_v4 Cyclopentanol dehydrogenase 0.9717 1 141
AF-A0A847VJH1-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9707 6 141
AF-A0A536GJ54-F1-model_v4 SDR family oxidoreductase 0.9686 5 141 GO:0016491
AF-A0A7V3NVI7-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9655 8 141

Feature Viewer

pLDDT pTM Quality
86.13 0.87 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map