F347145

General Info

Members Datasets Scaffolds Average Seq Length
234 172 468 350

Family's Representative Sequence

Representative Sequence 3300021384|Ga0213876_10043723|Ga0213876_100437232
Length 395
Sequence MVTLISITYYEVGGLFGCLFYSQSSTAFLMQVSDLIGRIRLSPSATSWRNVLSTGMKGKVLAIYLFLGVFNIAAWLAAAVAFRHFPALLGTAFLAYSLGLRHAVDADHIAAIDNVTRKLMQESKRPIGVGLLFSLGHSTVVLIGSIVIASAASVLHTRFDAFKEVGGLIGTLVSILFLFGIALVNLFVLRTVYATFKSVRAGEPYKEEDLDLLLSGRGILPRLLRPLFRLIRSSWQMYPLGLLFGLGFDTATEIGLLGIAASEASKGLPFWDVLLFPILFTAGMSLIDTTDNILMVAAYGWAFQKPIRKLYYNLTITSVSVMIAFCIGGLEALGLLAEHFQLNGSFWKGIGSLNQNFSAIGYLIITLFVVSWVVSIVAYRIKRFDEIRVAEEVAD

Samples

Sample ID Description Type Environment
1 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
22 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
23 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
24 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
25 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
33 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
34 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
35 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
36 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
37 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
38 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
39 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
61 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
62 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
63 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
64 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
65 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
66 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
67 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
68 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
69 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
70 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
71 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
72 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
73 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
74 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
75 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
76 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
77 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
78 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
79 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
80 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
81 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
82 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
83 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
84 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
85 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
86 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
87 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
88 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
89 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
90 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
91 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
92 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
93 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
94 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
95 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
96 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
97 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
98 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
99 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
100 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
101 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
102 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
103 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
104 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
105 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
106 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
107 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
108 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
109 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
110 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
111 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
112 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
113 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
114 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
115 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
116 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
117 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
118 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
119 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
120 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
121 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
122 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
123 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
124 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
125 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
126 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
127 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
128 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
129 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
130 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
131 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
132 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
133 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
134 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
135 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
136 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
137 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
138 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
139 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
140 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
141 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
142 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
143 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
144 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
145 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
146 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
147 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
148 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
150 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
151 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
152 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
153 2501025501 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
154 2501025504 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
155 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
156 2510917014 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
157 2510917015 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
158 2519103095 Burkholderia sp. KJ006 Isolate Nodule
159 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
160 2582581311 Burkholderia sp. WP42 Isolate Rhizosphere
161 2744054900 Paraburkholderia ginsengiterrae DCY85-1 Isolate Unclassified
162 2744054901 Paraburkholderia ginsengiterrae DCY85 Isolate Unclassified
163 2816332253 Burkholderia vietnamiensis HI2297 Isolate Unclassified
164 2816332256 Burkholderia vietnamiensis MSMB608WGS Isolate Unclassified
165 2816332286 Burkholderia vietnamiensis HI2221 Isolate Rhizosphere
166 2856287931 Paraburkholderia bannensis BE22 Isolate Rhizosphere
167 2870068957 Burkholderia sp. JP2-270 Isolate Unclassified
168 2904434214 Robbsia andropogonis 1567 Isolate Rhizosphere
169 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere
170 8020807995 Burkholderia sp. B10 Isolate Rhizosphere
171 8040167225 Burkholderia vietnamiensis RS1 Isolate Unclassified
172 8040173305 Burkholderia vietnamiensis BE10 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.17
Metatranscriptomes 0.85
Isolates 8.97

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.14
Nodule 0.85
Rhizoplane 7.69
Rhizosphere 76.92
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0213876_10043723 3300021384 Bacteria 2367
2 JGI24735J21928_10000826 3300002067 Bacteria 11023
3 Ga0065715_10208854 3300005293 Bacteria 1324
4 Ga0070658_10062137 3300005327 Bacteria 3044
5 Ga0070660_100061638 3300005339 Bacteria 2912
6 Ga0070659_100112431 3300005366 Bacteria 2199
7 Ga0070711_100379816 3300005439 Bacteria 1142
8 Ga0070663_100007761 3300005455 Bacteria 6553
9 Ga0070706_100001075 3300005467 Bacteria 29541
10 Ga0070706_100067465 3300005467 Bacteria 3309
11 Ga0070707_100003412 3300005468 Bacteria 15012
12 Ga0070699_100046587 3300005518 Bacteria 3751
13 Ga0070679_100038117 3300005530 Bacteria 4778
14 Ga0070684_100196042 3300005535 Bacteria 1839
15 Ga0070697_100003789 3300005536 Bacteria 11611
16 Ga0070697_100055178 3300005536 Bacteria 3230
17 Ga0068853_100129170 3300005539 Bacteria 2260
18 Ga0068855_100045327 3300005563 Bacteria 5201
19 Ga0068855_100064857 3300005563 Bacteria 4259
20 Ga0068855_100267919 3300005563 Bacteria 1900
21 Ga0068854_100056326 3300005578 Bacteria 2833
22 Ga0068856_100000376 3300005614 Bacteria 49155
23 Ga0068856_100165652 3300005614 Bacteria 2221
24 Ga0068852_100021564 3300005616 Bacteria 5147
25 Ga0068852_100161495 3300005616 Bacteria 2093
26 Ga0070717_10004653 3300006028 Bacteria 9951
27 Ga0070715_10095264 3300006163 Bacteria 1378
28 Ga0099824_1004823 3300006942 Bacteria 19291
29 Ga0099794_10034398 3300007265 Bacteria 2387
30 Ga0099794_10050621 3300007265 Bacteria 1998
31 Ga0099795_10000359 3300007788 Bacteria 8235
32 Ga0099795_10006245 3300007788 Bacteria 3239
33 Ga0105251_10000816 3300009011 Bacteria 28017
34 Ga0105240_10002012 3300009093 Bacteria 33513
35 Ga0105240_10115457 3300009093 Bacteria 3241
36 Ga0105240_10124064 3300009093 Bacteria 3106
37 Ga0105248_10009249 3300009177 Bacteria 10842
38 Ga0105238_10029047 3300009551 Bacteria 5633
39 Ga0099796_10000144 3300010159 Bacteria 10528
40 Ga0099796_10063392 3300010159 Bacteria 1316
41 Ga0157370_10033428 3300013104 Bacteria 5015
42 Ga0157370_10300861 3300013104 Bacteria 1481
43 Ga0157369_10049943 3300013105 Bacteria 4532
44 Ga0157369_10086493 3300013105 Bacteria 3348
45 Ga0157369_10144510 3300013105 Bacteria 2515
46 Ga0157374_10230556 3300013296 Bacteria 1819
47 Ga0163162_10000197 3300013306 Bacteria 55860
48 Ga0157372_10003261 3300013307 Bacteria 17534
49 Ga0157372_10003832 3300013307 Bacteria 16165
50 Ga0157372_10028040 3300013307 Bacteria 6142
51 Ga0157372_10240383 3300013307 Bacteria 2101
52 Ga0157375_10011005 3300013308 Bacteria 7979
53 Ga0157379_10090796 3300014968 Bacteria 2740
54 Ga0157379_10125668 3300014968 Bacteria 2308
55 Ga0209233_1009897 3300025261 Bacteria 2880
56 Ga0207426_1004499 3300025302 Bacteria 6759
57 Ga0207713_1003075 3300025735 Bacteria 11601
58 Ga0207647_10070539 3300025904 Bacteria 2110
59 Ga0207685_10094125 3300025905 Bacteria 1268
60 Ga0207705_10001250 3300025909 Bacteria 20434
61 Ga0207705_10109243 3300025909 Bacteria 2042
62 Ga0207705_10145582 3300025909 Bacteria 1772
63 Ga0207684_10001285 3300025910 Bacteria 27685
64 Ga0207684_10013579 3300025910 Bacteria 7039
65 Ga0207684_10102502 3300025910 Bacteria 2447
66 Ga0207695_10001548 3300025913 Bacteria 37825
67 Ga0207693_10282163 3300025915 Bacteria 1301
68 Ga0207657_10294563 3300025919 Bacteria 1286
69 Ga0207652_10026819 3300025921 Bacteria 4801
70 Ga0207646_10000353 3300025922 Bacteria 62321
71 Ga0207700_10124467 3300025928 Bacteria 2095
72 Ga0207664_10009041 3300025929 Bacteria 6976
73 Ga0207664_10158302 3300025929 Bacteria 1930
74 Ga0207690_10086500 3300025932 Bacteria 2203
75 Ga0207711_10210219 3300025941 Bacteria 1777
76 Ga0207667_10001193 3300025949 Bacteria 32593
77 Ga0207667_10028667 3300025949 Bacteria 6045
78 Ga0207640_10044145 3300025981 Bacteria 2854
79 Ga0207678_10068736 3300026067 Bacteria 3038
80 Ga0207678_10097219 3300026067 Bacteria 2517
81 Ga0207702_10000187 3300026078 Bacteria 74357
82 Ga0207702_10082253 3300026078 Bacteria 2799
83 Ga0207641_10327016 3300026088 Bacteria 1455
84 Ga0209588_1013990 3300027671 Bacteria 2454
85 Ga0268266_10070295 3300028379 Bacteria 3033
86 Ga0265337_1008121 3300028556 Bacteria 3850
87 Ga0265323_10010286 3300028653 Bacteria 3797
88 Ga0265336_10009813 3300028666 Bacteria 3299
89 Ga0265336_10015023 3300028666 Bacteria 2556
90 Ga0265336_10018824 3300028666 Bacteria 2233
91 Ga0265338_10000109 3300028800 Bacteria 152826
92 Ga0265338_10019000 3300028800 Bacteria 7322
93 Ga0265338_10055242 3300028800 Bacteria 3534
94 Ga0265338_10116910 3300028800 Bacteria 2135
95 Ga0265760_10023302 3300031090 Bacteria 1798
96 Ga0265760_10029464 3300031090 Bacteria 1614
97 Ga0265330_10005127 3300031235 Bacteria 6563
98 Ga0265325_10000375 3300031241 Bacteria 31400
99 Ga0265340_10102038 3300031247 Bacteria 1332
100 Ga0265339_10004810 3300031249 Bacteria 9132
101 Ga0265339_10008123 3300031249 Bacteria 6700
102 Ga0265331_10054748 3300031250 Bacteria 1899
103 Ga0265316_10002621 3300031344 Bacteria 18546
104 Ga0265316_10020164 3300031344 Bacteria 5680
105 Ga0265316_10095633 3300031344 Bacteria 2262
106 Ga0265316_10168321 3300031344 Bacteria 1636
107 Ga0265316_10186104 3300031344 Bacteria 1545
108 Ga0265316_10223374 3300031344 Bacteria 1389
109 Ga0265313_10014987 3300031595 Bacteria 4546
110 Ga0265313_10056915 3300031595 Bacteria 1847
111 Ga0265313_10061462 3300031595 Bacteria 1758
112 Ga0265314_10011439 3300031711 Bacteria 7324
113 Ga0265314_10015474 3300031711 Bacteria 6053
114 Ga0265314_10067630 3300031711 Bacteria 2405
115 Ga0265342_10013899 3300031712 Bacteria 5370
116 Ga0265342_10062878 3300031712 Bacteria 2183
117 Ga0373933_0019264 3300035724 Bacteria 3852
118 Ga0373947_0235910 3300035725 Bacteria 1206
119 Ga0373937_0014269 3300036401 Bacteria 7012
120 Ga0395900_0182483 3300037418 Bacteria 2132
121 Ga0436364_1229834 3300037853 Bacteria 1858
122 Ga0436360_0827376 3300039438 Bacteria 6248
123 Ga0436363_0110355 3300039450 Bacteria 1995
124 Ga0436363_0925023 3300039450 Bacteria 3140
125 Ga0436363_1445903 3300039450 Bacteria 3392
126 Ga0436362_0496885 3300039453 Bacteria 3452
127 Ga0466969_0062218 3300044656 Bacteria 1811
128 Ga0466965_0096649 3300044683 Bacteria 1507
129 Ga0466966_0062475 3300044684 Bacteria 2348
130 Ga0466961_0009600 3300044693 Bacteria 6159
131 Ga0466958_0087112 3300045836 Bacteria 1928
132 Ga0466967_0096065 3300045976 Bacteria 2703
133 Ga0495590_0002156 3300046457 Bacteria 8251
134 Ga0495638_0003372 3300046460 Bacteria 12596
135 Ga0495653_0000461 3300046463 Bacteria 31721
136 Ga0495653_0021029 3300046463 Bacteria 5288
137 Ga0495580_0001421 3300046472 Bacteria 21044
138 Ga0495582_0001160 3300046473 Bacteria 14819
139 Ga0495605_0001543 3300046474 Bacteria 14953
140 Ga0495639_0000514 3300046475 Bacteria 18210
141 Ga0495594_0002168 3300046499 Bacteria 10219
142 Ga0495583_0054906 3300046506 Bacteria 1802
143 Ga0495606_0024270 3300046507 Bacteria 4374
144 Ga0495606_0070944 3300046507 Bacteria 2195
145 Ga0495628_0006812 3300046516 Bacteria 9933
146 Ga0495630_0019759 3300046517 Bacteria 4956
147 Ga0495644_0011605 3300046523 Bacteria 3392
148 Ga0495648_0001726 3300046524 Bacteria 21098
149 Ga0495648_0021008 3300046524 Bacteria 4534
150 Ga0495666_0006642 3300046526 Bacteria 5815
151 Ga0495652_0001699 3300046529 Bacteria 23777
152 Ga0495665_0001240 3300046531 Bacteria 13605
153 Ga0495597_0015043 3300046542 Bacteria 3670
154 Ga0495622_0039124 3300046557 Bacteria 2208
155 Ga0495635_0001002 3300046663 Bacteria 18662
156 Ga0495623_0020830 3300046679 Bacteria 4237
157 Ga0495646_0012658 3300046680 Bacteria 5360
158 Ga0495669_0077804 3300046684 Bacteria 1519
159 Ga0495613_0056613 3300046689 Bacteria 2879
160 Ga0495624_0000817 3300046690 Bacteria 24613
161 Ga0495670_0001018 3300046691 Bacteria 13616
162 Ga0495589_0005586 3300046794 Bacteria 6631
163 Ga0495660_0146808 3300046810 Bacteria 1168
164 Ga0495604_0000950 3300047317 Bacteria 24183
165 Ga0495674_0039912 3300047319 Bacteria 4203
166 Ga0495672_0004363 3300047320 Bacteria 11621
167 Ga0495680_0000283 3300047322 Bacteria 56876
168 Ga0495680_0044096 3300047322 Bacteria 3528
169 Ga0495683_0002083 3300047323 Bacteria 12392
170 Ga0495683_0085402 3300047323 Bacteria 1535
171 Ga0495675_0014729 3300047444 Bacteria 4942
172 Ga0495673_0012496 3300047469 Bacteria 4498
173 Ga0495681_0041137 3300047470 Bacteria 2245
174 Ga0495686_0000352 3300047472 Bacteria 75409
175 Ga0495593_0001958 3300047673 Bacteria 12280
176 Ga0495593_0007497 3300047673 Bacteria 6379
177 Ga0495602_0002346 3300048088 Bacteria 19159
178 Ga0496100_0000544 3300048903 Bacteria 17847
179 Ga0496101_0004503 3300048904 Bacteria 8784
180 Ga0496102_0004135 3300048905 Bacteria 12306
181 Ga0496102_0030439 3300048905 Bacteria 4831
182 Ga0496103_0003885 3300048906 Bacteria 9090
183 Ga0496104_0048316 3300048907 Bacteria 4012
184 Ga0496106_0003096 3300048909 Bacteria 12412
185 Ga0496106_0056949 3300048909 Bacteria 2955
186 Ga0496107_0011630 3300048910 Bacteria 6134
187 Ga0496108_0001217 3300048911 Bacteria 20192
188 Ga0496108_0130728 3300048911 Bacteria 2158
189 Ga0496109_0012089 3300048912 Bacteria 7440
190 Ga0496110_0004973 3300048913 Bacteria 10377
191 Ga0496111_0062218 3300048914 Bacteria 2706
192 Ga0496112_0011685 3300048915 Bacteria 8032
193 Ga0496112_0056576 3300048915 Bacteria 3860
194 Ga0496113_0104546 3300048916 Bacteria 2197
195 Ga0496113_0165726 3300048916 Bacteria 1748
196 Ga0496116_0008665 3300048919 Bacteria 8795
197 Ga0496117_0005757 3300048920 Bacteria 12878
198 Ga0496118_0025651 3300048921 Bacteria 5045
199 Ga0496121_0000100 3300048924 Bacteria 198641
200 Ga0496121_0010117 3300048924 Bacteria 10690
201 Ga0496123_0029748 3300048926 Bacteria 4011
202 Ga0496124_0006717 3300048927 Bacteria 12448
203 Ga0496125_0010548 3300048928 Bacteria 9341
204 Ga0496126_0004248 3300048929 Bacteria 17246
205 Ga0496126_0007038 3300048929 Bacteria 12406
206 Ga0496126_0012670 3300048929 Bacteria 8628
207 Ga0496126_0033467 3300048929 Bacteria 4835
208 Ga0496126_0050654 3300048929 Bacteria 3783
209 Ga0501047_0080749 3300049581 Bacteria 3126
210 Ga0501035_0374178 3300049822 Bacteria 1189
211 Ga0500651_0003124 3300053093 Bacteria 8975
212 Ga0500618_003431 3300053125 Bacteria 5423
213 Ga0500627_0031400 3300053158 Bacteria 2231
214 2501069470 2501025501 Bacteria 7768574
215 2501411706 2501025504 Bacteria 8008976
216 2511091794 2510917013 Bacteria 9951648
217 2511098718 2510917014 Bacteria 8296963
218 2511109203 2510917015 Bacteria 7950052
219 2519462722 2519103095 Bacteria 6629912
220 2553003476 2551306416 Bacteria 6152985
221 2585291801 2582581311 Bacteria 6763856
222 2585294760 2582581311 Bacteria 6763856
223 2746087473 2744054900 Bacteria 8399525
224 2746094553 2744054901 Bacteria 8397047
225 2817262600 2816332253 Bacteria 6764532
226 2817276329 2816332256 Bacteria 6891714
227 2817453771 2816332286 Bacteria 6853759
228 2856292345 2856287931 Bacteria 7223934
229 2870074190 2870068957 Bacteria 8925310
230 2904438182 2904434214 Bacteria 6230908
231 2923511599 2923510766 Bacteria 5926163
232 8020809759 8020807995 Bacteria 6801506
233 8040168644 8040167225 Bacteria 6542727
234 8040178251 8040173305 Bacteria 6827067
235 Ga0213876_10043723
236 JGI24735J21928_10000826
237 Ga0065715_10208854
238 Ga0070658_10062137
239 Ga0070660_100061638
240 Ga0070659_100112431
241 Ga0070711_100379816
242 Ga0070663_100007761
243 Ga0070706_100001075
244 Ga0070706_100067465
245 Ga0070707_100003412
246 Ga0070699_100046587
247 Ga0070679_100038117
248 Ga0070684_100196042
249 Ga0070697_100003789
250 Ga0070697_100055178
251 Ga0068853_100129170
252 Ga0068855_100045327
253 Ga0068855_100064857
254 Ga0068855_100267919
255 Ga0068854_100056326
256 Ga0068856_100000376
257 Ga0068856_100165652
258 Ga0068852_100021564
259 Ga0068852_100161495
260 Ga0070717_10004653
261 Ga0070715_10095264
262 Ga0099824_1004823
263 Ga0099794_10034398
264 Ga0099794_10050621
265 Ga0099795_10000359
266 Ga0099795_10006245
267 Ga0105251_10000816
268 Ga0105240_10002012
269 Ga0105240_10115457
270 Ga0105240_10124064
271 Ga0105248_10009249
272 Ga0105238_10029047
273 Ga0099796_10000144
274 Ga0099796_10063392
275 Ga0157370_10033428
276 Ga0157370_10300861
277 Ga0157369_10049943
278 Ga0157369_10086493
279 Ga0157369_10144510
280 Ga0157374_10230556
281 Ga0163162_10000197
282 Ga0157372_10003261
283 Ga0157372_10003832
284 Ga0157372_10028040
285 Ga0157372_10240383
286 Ga0157375_10011005
287 Ga0157379_10090796
288 Ga0157379_10125668
289 Ga0209233_1009897
290 Ga0207426_1004499
291 Ga0207713_1003075
292 Ga0207647_10070539
293 Ga0207685_10094125
294 Ga0207705_10001250
295 Ga0207705_10109243
296 Ga0207705_10145582
297 Ga0207684_10001285
298 Ga0207684_10013579
299 Ga0207684_10102502
300 Ga0207695_10001548
301 Ga0207693_10282163
302 Ga0207657_10294563
303 Ga0207652_10026819
304 Ga0207646_10000353
305 Ga0207700_10124467
306 Ga0207664_10009041
307 Ga0207664_10158302
308 Ga0207690_10086500
309 Ga0207711_10210219
310 Ga0207667_10001193
311 Ga0207667_10028667
312 Ga0207640_10044145
313 Ga0207678_10068736
314 Ga0207678_10097219
315 Ga0207702_10000187
316 Ga0207702_10082253
317 Ga0207641_10327016
318 Ga0209588_1013990
319 Ga0268266_10070295
320 Ga0265337_1008121
321 Ga0265323_10010286
322 Ga0265336_10009813
323 Ga0265336_10015023
324 Ga0265336_10018824
325 Ga0265338_10000109
326 Ga0265338_10019000
327 Ga0265338_10055242
328 Ga0265338_10116910
329 Ga0265760_10023302
330 Ga0265760_10029464
331 Ga0265330_10005127
332 Ga0265325_10000375
333 Ga0265340_10102038
334 Ga0265339_10004810
335 Ga0265339_10008123
336 Ga0265331_10054748
337 Ga0265316_10002621
338 Ga0265316_10020164
339 Ga0265316_10095633
340 Ga0265316_10168321
341 Ga0265316_10186104
342 Ga0265316_10223374
343 Ga0265313_10014987
344 Ga0265313_10056915
345 Ga0265313_10061462
346 Ga0265314_10011439
347 Ga0265314_10015474
348 Ga0265314_10067630
349 Ga0265342_10013899
350 Ga0265342_10062878
351 Ga0373933_0019264
352 Ga0373947_0235910
353 Ga0373937_0014269
354 Ga0395900_0182483
355 Ga0436364_1229834
356 Ga0436360_0827376
357 Ga0436363_0110355
358 Ga0436363_0925023
359 Ga0436363_1445903
360 Ga0436362_0496885
361 Ga0466969_0062218
362 Ga0466965_0096649
363 Ga0466966_0062475
364 Ga0466961_0009600
365 Ga0466958_0087112
366 Ga0466967_0096065
367 Ga0495590_0002156
368 Ga0495638_0003372
369 Ga0495653_0000461
370 Ga0495653_0021029
371 Ga0495580_0001421
372 Ga0495582_0001160
373 Ga0495605_0001543
374 Ga0495639_0000514
375 Ga0495594_0002168
376 Ga0495583_0054906
377 Ga0495606_0024270
378 Ga0495606_0070944
379 Ga0495628_0006812
380 Ga0495630_0019759
381 Ga0495644_0011605
382 Ga0495648_0001726
383 Ga0495648_0021008
384 Ga0495666_0006642
385 Ga0495652_0001699
386 Ga0495665_0001240
387 Ga0495597_0015043
388 Ga0495622_0039124
389 Ga0495635_0001002
390 Ga0495623_0020830
391 Ga0495646_0012658
392 Ga0495669_0077804
393 Ga0495613_0056613
394 Ga0495624_0000817
395 Ga0495670_0001018
396 Ga0495589_0005586
397 Ga0495660_0146808
398 Ga0495604_0000950
399 Ga0495674_0039912
400 Ga0495672_0004363
401 Ga0495680_0000283
402 Ga0495680_0044096
403 Ga0495683_0002083
404 Ga0495683_0085402
405 Ga0495675_0014729
406 Ga0495673_0012496
407 Ga0495681_0041137
408 Ga0495686_0000352
409 Ga0495593_0001958
410 Ga0495593_0007497
411 Ga0495602_0002346
412 Ga0496100_0000544
413 Ga0496101_0004503
414 Ga0496102_0004135
415 Ga0496102_0030439
416 Ga0496103_0003885
417 Ga0496104_0048316
418 Ga0496106_0003096
419 Ga0496106_0056949
420 Ga0496107_0011630
421 Ga0496108_0001217
422 Ga0496108_0130728
423 Ga0496109_0012089
424 Ga0496110_0004973
425 Ga0496111_0062218
426 Ga0496112_0011685
427 Ga0496112_0056576
428 Ga0496113_0104546
429 Ga0496113_0165726
430 Ga0496116_0008665
431 Ga0496117_0005757
432 Ga0496118_0025651
433 Ga0496121_0000100
434 Ga0496121_0010117
435 Ga0496123_0029748
436 Ga0496124_0006717
437 Ga0496125_0010548
438 Ga0496126_0004248
439 Ga0496126_0007038
440 Ga0496126_0012670
441 Ga0496126_0033467
442 Ga0496126_0050654
443 Ga0501047_0080749
444 Ga0501035_0374178
445 Ga0500651_0003124
446 Ga0500618_003431
447 Ga0500627_0031400
448 2501069470
449 2501411706
450 2511091794
451 2511098718
452 2511109203
453 2519462722
454 2553003476
455 2585291801
456 2585294760
457 2746087473
458 2746094553
459 2817262600
460 2817276329
461 2817453771
462 2856292345
463 2870074190
464 2904438182
465 2923511599
466 8020809759
467 8040168644
468 8040178251

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03824

NicO

High-affinity nickel-transport protein

88

378

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
4oaa-assembly1.cif.gz_B crystal structure of e. coli lactose permease g46w,g262w bound to sugar 0.3595 40 270
6vbg-assembly2.cif.gz_B lactose permease complex with thiodigalactoside and nanobody 9043 0.3488 40 274
4iu8-assembly1.cif.gz_A crystal structure of a membrane transporter (selenomethionine derivative) 0.3133 60 270
8dl8-assembly1.cif.gz_A cryo-em structure of human ferroportin/slc40 bound to co2+ in nanodisc 0.3097 42 311
4jr9-assembly1.cif.gz_A crystal structure of nitrate/nitrite exchanger nark 0.3089 78 267
ID Description Score Start End Superfamily
af_Q2R4J1_1_279_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4198 2 283 1.20.1250.20
af_Q8IIJ7_1073_1258_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4099 57 269 1.20.1250.20
af_A0A1D6PJB8_26_433_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3977 50 292 1.20.1250.20
af_Q8IIJ7_1073_1258_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3972 57 269 1.20.1250.20
af_Q2R4J1_1_279_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3869 2 283 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A838J6P8-F1-model_v4 Nickel/cobalt efflux system 0.9585 18 328 GO:0005886
GO:0012505
GO:0015099
AF-A0A7L5ACM1-F1-model_v4 Nickel/cobalt efflux system 0.9559 18 328 GO:0005886
GO:0012505
GO:0015099
AF-A5EH14-F1-model_v4 deleted 0.9523 18 328
AF-A0A1G5PS43-F1-model_v4 Nickel/cobalt efflux system 0.9448 18 328 GO:0005886
GO:0012505
GO:0015099
AF-A0A679KC43-F1-model_v4 Nickel/cobalt efflux system 0.9407 18 329 GO:0005886
GO:0012505
GO:0015099

Map