F347080

General Info

Members Datasets Scaffolds Average Seq Length
234 150 206 591

Family's Representative Sequence

Representative Sequence 3300013100|Ga0157373_10028259|Ga0157373_100282592
Length 621
Sequence MTAGTEPSTRWPAIRKDPGSFLVRPNLVDYEASRAAFSWAEARRELAGLPDGRGLNIAYEAADRHVSAGHGGREALRFIRADGSSHSLSYAHLAEQSNRFAAVLHGLGVGRGERVFSLAGRSPSLYIAMLGTFKNASVFCPLFSAFGPEPVRQRLQPGSGRALITTRALYRRKVAQLRDSLPDLLHVLLTDADGDPEPGTHDLAGLMQAAPADRGIEATQPGDMALLHFTSGTTGTPKGAIHVHDAVTAHHATGTFALDLHPDDVYWCTADPGWVTGTSYGVIAPLSHGVTSIVDEEEMDADRWYRILAEQHVTVWYTAPTALRMLMKAGAERATGKDLSALRFVASVGEPLNPEVVVWGGEAFGQPVHDNWWQTETGGIMISNFAATEIRPGSMGRPLPGIDAALVARDELGKPVVRDGQAVLVTEPDTMGELALRPGWPSMFRGYLHEEERYRRCFVGGWYLTGDLAKRDADGYYWFVGRGDDVIKSSGHLIGPFEVESSLMEHDAVAEAGVIGVPDPVAGEVVKAFVELRPGREPSEELRLDIIGFARKRLGPAVAPRLLDFTTALPKTRSGKILRRLLKARELGLPEGDTSTIEAPPGAGPGATAAQMAERKPEDQE

Samples

Sample ID Description Type Environment
1 2513237166 Paraburkholderia azotifigens UYPR1.413 Isolate Nodule
2 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
3 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
4 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
5 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
6 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
7 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
8 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
9 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
10 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
11 2808606371 Arthrobacter sp. SLBN-53 Isolate Unclassified
12 2808606372 Agromyces sp. 23-23 Isolate Unclassified
13 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
14 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
15 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
16 2867475112 Streptomyces sp. TM32 Isolate Unclassified
17 2870068957 Burkholderia sp. JP2-270 Isolate Unclassified
18 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
19 2885270888 Paraburkholderia sp. UYCPa14C Isolate Unclassified
20 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
21 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
22 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
23 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
24 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
25 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
26 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
27 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
28 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
34 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
35 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
44 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
45 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
51 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
52 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
53 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
54 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
55 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
56 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
57 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
58 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
59 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
60 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
61 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
62 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
63 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
64 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
65 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
66 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
67 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
68 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
69 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
70 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
71 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
72 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
73 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
74 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
75 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
76 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
77 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
78 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
79 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
80 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
81 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
82 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
83 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
84 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
85 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
86 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
87 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
88 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
89 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
90 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
91 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
92 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
93 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
94 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
95 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
96 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
97 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
98 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
99 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
100 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
101 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
102 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
103 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
104 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
105 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
106 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
107 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
108 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
109 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
110 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
111 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
112 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
113 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
114 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
129 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
130 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
131 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
132 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
133 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
134 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
135 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
136 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
137 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
138 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
139 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
140 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
141 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
142 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
143 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
144 3300059643 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 13R_AD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
145 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
146 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
147 642555112 Paraburkholderia phymatum STM815 Isolate Nodule
148 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere
149 8020945358 Burkholderia sp. BE17 Isolate Rhizosphere
150 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 85.47
Metatranscriptomes 2.56
Isolates 11.97

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.42
Nodule 0.85
Rhizoplane 3.85
Rhizosphere 83.76
Stem 0
Stem Tuber 0
Unclassified 8.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10135045 3300005327 Bacteria 2057
2 Ga0070670_100023425 3300005331 Bacteria 5315
3 Ga0070714_100000001 3300005435 Bacteria 469087
4 Ga0070714_100010310 3300005435 Bacteria 7383
5 Ga0070714_100011908 3300005435 Bacteria 6918
6 Ga0070714_100040886 3300005435 Bacteria 3909
7 Ga0070710_10001704 3300005437 Bacteria 10361
8 Ga0070710_10011834 3300005437 Bacteria 4321
9 Ga0070665_100139752 3300005548 Bacteria 2425
10 Ga0068855_100034840 3300005563 Bacteria 6000
11 Ga0068856_100005742 3300005614 Bacteria 12228
12 Ga0068852_100021098 3300005616 Bacteria 5192
13 Ga0075368_10007838 3300006042 Bacteria 3784
14 Ga0075368_10015775 3300006042 Bacteria 2808
15 Ga0075364_10010396 3300006051 Bacteria 5621
16 Ga0075367_10004815 3300006178 Bacteria 6646
17 Ga0105240_10153027 3300009093 Bacteria 2745
18 Ga0114129_10009810 3300009147 Bacteria 13655
19 Ga0157373_10028259 3300013100 Bacteria 4046
20 Ga0157369_10000059 3300013105 Bacteria 154283
21 Ga0157369_10052327 3300013105 Bacteria 4419
22 Ga0157369_10072585 3300013105 Bacteria 3694
23 Ga0157369_10186724 3300013105 Bacteria 2180
24 Ga0163162_10072617 3300013306 Bacteria 3496
25 Ga0163163_10025613 3300014325 Bacteria 5623
26 Ga0157379_10010705 3300014968 Bacteria 7991
27 Ga0209759_1000488 3300025256 Bacteria 43668
28 Ga0209025_1000754 3300025294 Bacteria 54170
29 Ga0207692_10003330 3300025898 Bacteria 6263
30 Ga0207647_10016368 3300025904 Bacteria 5062
31 Ga0207671_10000608 3300025914 Bacteria 47424
32 Ga0207650_10015366 3300025925 Bacteria 5331
33 Ga0207664_10000007 3300025929 Bacteria 374590
34 Ga0207664_10000423 3300025929 Bacteria 30218
35 Ga0207664_10012327 3300025929 Bacteria 6107
36 Ga0209813_10003102 3300027866 Bacteria 3861
37 Ga0207428_10033523 3300027907 Bacteria 4216
38 Ga0307408_100017650 3300031548 Bacteria 4778
39 Ga0316579_10032078 3300031691 Bacteria 2408
40 Ga0316576_10001546 3300031727 Bacteria 12460
41 Ga0316576_10044812 3300031727 Bacteria 3197
42 Ga0316576_10045940 3300031727 Bacteria 3159
43 Ga0316576_10052094 3300031727 Bacteria 2980
44 Ga0316576_10057088 3300031727 Bacteria 2852
45 Ga0316578_10010820 3300031728 Bacteria 4750
46 Ga0316578_10031481 3300031728 Bacteria 3023
47 Ga0307516_10003041 3300031730 Bacteria 21897
48 Ga0307405_10059534 3300031731 Bacteria 2407
49 Ga0316577_10075067 3300031733 Bacteria 1887
50 Ga0307413_10007973 3300031824 Bacteria 4962
51 Ga0307410_10002524 3300031852 Bacteria 8851
52 Ga0307412_10043417 3300031911 Bacteria 2927
53 Ga0307409_100020129 3300031995 Bacteria 4539
54 Ga0307416_100009570 3300032002 Bacteria 6352
55 Ga0307414_10028517 3300032004 Bacteria 3623
56 Ga0316583_10021958 3300032133 Bacteria 2287
57 Ga0316580_10013068 3300032139 Bacteria 2530
58 Ga0316586_1000229 3300033527 Bacteria 4847
59 Ga0316586_1001002 3300033527 Bacteria 3037
60 Ga0316588_1000529 3300033528 Bacteria 5291
61 Ga0316588_1004437 3300033528 Bacteria 2657
62 Ga0316587_1005723 3300033529 Bacteria 1875
63 Ga0373929_0000010 3300035085 Bacteria 192939
64 Ga0316574_0008630 3300035398 Bacteria 5666
65 Ga0373933_0009142 3300035724 Bacteria 5410
66 Ga0373937_0015838 3300036401 Bacteria 6681
67 Ga0316582_0064360 3300036647 Bacteria 2359
68 Ga0316584_0000975 3300036712 Bacteria 16403
69 Ga0316584_0005059 3300036712 Bacteria 8788
70 Ga0316584_0018284 3300036712 Bacteria 5056
71 Ga0316584_0024251 3300036712 Bacteria 4438
72 Ga0395899_0000668 3300037312 Bacteria 34727
73 Ga0316581_0004401 3300037588 Bacteria 3591
74 Ga0395901_0040046 3300038443 Bacteria 4851
75 Ga0451577_0045400 3300042876 Bacteria 3934
76 Ga0466961_0011503 3300044693 Bacteria 5660
77 Ga0451576_0000168 3300045051 Bacteria 165624
78 Ga0495603_0000735 3300046455 Bacteria 18662
79 Ga0495629_0153756 3300046459 Bacteria 1599
80 Ga0495651_0092460 3300046462 Bacteria 2266
81 Ga0495653_0038398 3300046463 Bacteria 3759
82 Ga0495653_0058368 3300046463 Bacteria 2933
83 Ga0495639_0002965 3300046475 Bacteria 7385
84 Ga0495662_0002270 3300046476 Bacteria 9692
85 Ga0495664_0004073 3300046477 Bacteria 7972
86 Ga0495664_0015134 3300046477 Bacteria 4383
87 Ga0495608_0015706 3300046511 Bacteria 5243
88 Ga0495628_0021355 3300046516 Bacteria 5328
89 Ga0495628_0024172 3300046516 Bacteria 4976
90 Ga0495630_0064312 3300046517 Bacteria 2756
91 Ga0495665_0000402 3300046531 Bacteria 21980
92 Ga0495586_0013803 3300046535 Bacteria 4286
93 Ga0495587_0003660 3300046536 Bacteria 10234
94 Ga0495587_0013517 3300046536 Bacteria 5128
95 Ga0495645_0000495 3300046543 Bacteria 27241
96 Ga0495667_0000098 3300046559 Bacteria 62781
97 Ga0495667_0005025 3300046559 Bacteria 8939
98 Ga0495588_0020933 3300046674 Bacteria 3218
99 Ga0495657_0025034 3300046675 Bacteria 4241
100 Ga0495623_0000571 3300046679 Bacteria 24511
101 Ga0495600_0001416 3300046809 Bacteria 13236
102 Ga0495604_0001597 3300047317 Bacteria 18661
103 Ga0495636_0003343 3300047318 Bacteria 6220
104 Ga0495676_0003851 3300047321 Bacteria 13647
105 Ga0495676_0008342 3300047321 Bacteria 9501
106 Ga0495675_0002875 3300047444 Bacteria 10332
107 Ga0495675_0063853 3300047444 Bacteria 2329
108 Ga0495593_0030328 3300047673 Bacteria 2960
109 Ga0495602_0004800 3300048088 Bacteria 14136
110 Ga0495602_0013025 3300048088 Bacteria 8508
111 Ga0496103_0067775 3300048906 Bacteria 2229
112 Ga0496105_0006501 3300048908 Bacteria 8987
113 Ga0496105_0101900 3300048908 Bacteria 2371
114 Ga0496107_0070126 3300048910 Bacteria 2544
115 Ga0496108_0023641 3300048911 Bacteria 5058
116 Ga0496109_0000129 3300048912 Bacteria 77469
117 Ga0496109_0169540 3300048912 Bacteria 2047
118 Ga0496111_0007035 3300048914 Bacteria 7351
119 Ga0496113_0000087 3300048916 Bacteria 40247
120 Ga0501031_0005131 3300049568 Bacteria 8530
121 Ga0501031_0053071 3300049568 Bacteria 2641
122 Ga0501032_0048531 3300049569 Bacteria 2866
123 Ga0501033_0020938 3300049570 Bacteria 4938
124 Ga0501033_0048827 3300049570 Bacteria 3143
125 Ga0501034_0000010 3300049571 Bacteria 312213
126 Ga0501034_0013269 3300049571 Bacteria 8488
127 Ga0501034_0013696 3300049571 Bacteria 8339
128 Ga0501034_0078263 3300049571 Bacteria 3311
129 Ga0501036_0004573 3300049572 Bacteria 11174
130 Ga0501036_0018402 3300049572 Bacteria 5853
131 Ga0501036_0042623 3300049572 Bacteria 3842
132 Ga0501036_0045151 3300049572 Bacteria 3733
133 Ga0501037_0005537 3300049573 Bacteria 9213
134 Ga0501038_0065163 3300049574 Bacteria 3105
135 Ga0501038_0086082 3300049574 Bacteria 2641
136 Ga0501038_0097036 3300049574 Bacteria 2459
137 Ga0501038_0099348 3300049574 Bacteria 2426
138 Ga0501039_0014613 3300049575 Bacteria 6010
139 Ga0501039_0044148 3300049575 Bacteria 3442
140 Ga0501039_0081208 3300049575 Bacteria 2524
141 Ga0501040_0031941 3300049576 Bacteria 3560
142 Ga0501040_0089418 3300049576 Bacteria 2139
143 Ga0501041_0002826 3300049577 Bacteria 9923
144 Ga0501041_0007086 3300049577 Bacteria 6573
145 Ga0501041_0016717 3300049577 Bacteria 4365
146 Ga0501042_0017593 3300049578 Bacteria 4932
147 Ga0501046_0048384 3300049580 Bacteria 3367
148 Ga0501046_0055772 3300049580 Bacteria 3103
149 Ga0501046_0110217 3300049580 Bacteria 2104
150 Ga0501047_0044573 3300049581 Bacteria 4286
151 Ga0501048_0007600 3300049582 Bacteria 8218
152 Ga0501048_0027031 3300049582 Bacteria 4173
153 Ga0501048_0041003 3300049582 Bacteria 3316
154 Ga0501071_0005084 3300049587 Bacteria 8417
155 Ga0501071_0013063 3300049587 Bacteria 5652
156 Ga0501071_0057391 3300049587 Bacteria 2813
157 Ga0501071_0088164 3300049587 Bacteria 2277
158 Ga0501072_0002697 3300049588 Bacteria 13317
159 Ga0501072_0005232 3300049588 Bacteria 9876
160 Ga0501072_0007845 3300049588 Bacteria 8109
161 Ga0501072_0011822 3300049588 Bacteria 6669
162 Ga0501072_0030145 3300049588 Bacteria 4240
163 Ga0501072_0107793 3300049588 Bacteria 2216
164 Ga0501073_0050656 3300049589 Bacteria 2910
165 Ga0501075_0006754 3300049591 Bacteria 7918
166 Ga0501075_0007727 3300049591 Bacteria 7466
167 Ga0501075_0015729 3300049591 Bacteria 5436
168 Ga0501075_0045034 3300049591 Bacteria 3311
169 Ga0501075_0071371 3300049591 Bacteria 2625
170 Ga0501076_0002085 3300049592 Bacteria 13715
171 Ga0501076_0031409 3300049592 Bacteria 4141
172 Ga0501076_0038778 3300049592 Bacteria 3740
173 Ga0501077_0004658 3300049593 Bacteria 8333
174 Ga0501077_0006385 3300049593 Bacteria 7230
175 Ga0501077_0053780 3300049593 Bacteria 2556
176 Ga0501079_0006047 3300049741 Bacteria 9073
177 Ga0501079_0017163 3300049741 Bacteria 5528
178 Ga0501079_0025050 3300049741 Bacteria 4578
179 Ga0501079_0032721 3300049741 Bacteria 3999
180 Ga0501079_0071777 3300049741 Bacteria 2675
181 Ga0501079_0169641 3300049741 Bacteria 1701
182 Ga0501080_0073425 3300049742 Bacteria 3183
183 Ga0501081_0005860 3300049743 Bacteria 7953
184 Ga0501081_0010478 3300049743 Bacteria 6050
185 Ga0501081_0016240 3300049743 Bacteria 4920
186 Ga0501081_0022923 3300049743 Bacteria 4180
187 Ga0501045_0000452 3300049824 Bacteria 25372
188 Ga0501045_0001729 3300049824 Bacteria 14702
189 Ga0501045_0014240 3300049824 Bacteria 5636
190 nmdc:mga00v17_2284_c2 3300050491 Bacteria 4557
191 nmdc:mga04h51_2937_c1 3300050495 Bacteria 4100
192 nmdc:mga05p37_8636_c1 3300050507 Bacteria 12043
193 Ga0495612_0005664 3300053078 Bacteria 5159
194 Ga0495619_0000248 3300053085 Bacteria 39283
195 Ga0495619_0024865 3300053085 Bacteria 3843
196 Ga0501084_0017284 3300054114 Bacteria 5993
197 Ga0587072_001359 3300059643 Bacteria 2995
198 Ga0501082_0018812 3300060353 Bacteria 5952
199 Ga0501082_0025078 3300060353 Bacteria 5137
200 Ga0501082_0033079 3300060353 Bacteria 4459
201 Ga0501082_0055430 3300060353 Bacteria 3415
202 Ga0530510_0000618 3300061734 Bacteria 22898
203 Ga0530510_0000689 3300061734 Bacteria 21844
204 Ga0530510_0001278 3300061734 Bacteria 16809
205 Ga0530510_0007918 3300061734 Bacteria 7413
206 Ga0530510_0045497 3300061734 Bacteria 3171

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300014968 Ga0157379_10010705 Ga0157379_100107053 448
2 3300046459 Ga0495629_0153756 Ga0495629_0153756_33_1511 468
3 3300005435 Ga0070714_100010310 Ga0070714_1000103105 472
4 3300025929 Ga0207664_10012327 Ga0207664_100123274 472
5 3300049587 Ga0501071_0088164 Ga0501071_0088164_430_2142 513
6 3300049591 Ga0501075_0071371 Ga0501075_0071371_330_2042 513
7 3300049591 Ga0501075_0045034 Ga0501075_0045034_524_2146 519
8 3300049741 Ga0501079_0025050 Ga0501079_0025050_2000_3646 526
9 3300049569 Ga0501032_0048531 Ga0501032_0048531_1165_2829 527
10 3300049743 Ga0501081_0022923 Ga0501081_0022923_2508_4157 528
11 3300006051 Ga0075364_10010396 Ga0075364_100103962 529
12 3300050491 nmdc:mga00v17_2284_c2 nmdc:mga00v17_2284_c2_1059_2732 529
13 3300049741 Ga0501079_0169641 Ga0501079_0169641_25_1683 530
14 3300053085 Ga0495619_0000248 Ga0495619_0000248_25006_26739 538
15 3300009093 Ga0105240_10153027 Ga0105240_101530271 548
16 3300013105 Ga0157369_10186724 Ga0157369_101867242 548
17 3300005548 Ga0070665_100139752 Ga0070665_1001397522 549
18 3300005563 Ga0068855_100034840 Ga0068855_1000348402 549
19 3300005616 Ga0068852_100021098 Ga0068852_1000210983 549
20 3300025904 Ga0207647_10016368 Ga0207647_100163683 549
21 3300027907 Ga0207428_10033523 Ga0207428_100335232 550
22 3300037312 Ga0395899_0000668 Ga0395899_0000668_8980_10710 552
23 3300048088 Ga0495602_0004800 Ga0495602_0004800_12385_14103 552
24 3300005331 Ga0070670_100023425 Ga0070670_1000234252 553
25 3300009147 Ga0114129_10009810 Ga0114129_1000981014 553
26 3300014325 Ga0163163_10025613 Ga0163163_100256132 553
27 3300025925 Ga0207650_10015366 Ga0207650_100153663 553
28 3300048908 Ga0496105_0006501 Ga0496105_0006501_3689_5446 553
29 3300048910 Ga0496107_0070126 Ga0496107_0070126_627_2384 553
30 3300048912 Ga0496109_0169540 Ga0496109_0169540_168_1925 553
31 3300048914 Ga0496111_0007035 Ga0496111_0007035_1774_3531 553
32 3300048916 Ga0496113_0000087 Ga0496113_0000087_24736_26493 553
33 3300050507 nmdc:mga05p37_8636_c1 nmdc:mga05p37_8636_c1_6989_8746 553
34 3300013306 Ga0163162_10072617 Ga0163162_100726172 554
35 3300048906 Ga0496103_0067775 Ga0496103_0067775_69_1829 554
36 3300005435 Ga0070714_100040886 Ga0070714_1000408863 556
37 3300005437 Ga0070710_10011834 Ga0070710_100118344 556
38 3300049572 Ga0501036_0042623 Ga0501036_0042623_1283_3082 557
39 3300049574 Ga0501038_0099348 Ga0501038_0099348_597_2339 557
40 3300049575 Ga0501039_0014613 Ga0501039_0014613_628_2427 557
41 3300049576 Ga0501040_0031941 Ga0501040_0031941_135_1877 557
42 3300049577 Ga0501041_0002826 Ga0501041_0002826_3043_4842 557
43 3300049587 Ga0501071_0005084 Ga0501071_0005084_3035_4834 557
44 3300049588 Ga0501072_0007845 Ga0501072_0007845_1627_3426 557
45 3300049591 Ga0501075_0006754 Ga0501075_0006754_3063_4862 557
46 3300049593 Ga0501077_0004658 Ga0501077_0004658_4027_5826 557
47 3300049741 Ga0501079_0017163 Ga0501079_0017163_1657_3456 557
48 3300049743 Ga0501081_0010478 Ga0501081_0010478_1140_2939 557
49 3300049824 Ga0501045_0001729 Ga0501045_0001729_7476_9275 557
50 3300054114 Ga0501084_0017284 Ga0501084_0017284_1841_3640 557
51 3300060353 Ga0501082_0025078 Ga0501082_0025078_2933_4732 557
52 3300061734 Ga0530510_0000618 Ga0530510_0000618_13934_15733 557
53 3300049580 Ga0501046_0110217 Ga0501046_0110217_267_2012 558
54 3300049741 Ga0501079_0032721 Ga0501079_0032721_501_2276 558
55 3300061734 Ga0530510_0000689 Ga0530510_0000689_21_1766 558
56 3300061734 Ga0530510_0001278 Ga0530510_0001278_11566_13341 558
57 3300005437 Ga0070710_10001704 Ga0070710_1000170413 559
58 3300025898 Ga0207692_10003330 Ga0207692_100033303 559
59 3300048911 Ga0496108_0023641 Ga0496108_0023641_543_2288 560
60 3300048912 Ga0496109_0000129 Ga0496109_0000129_15557_17302 560
61 iso_pu_bacteria 2643221587 2643946868 561
62 iso_pu_bacteria 2643221677 2644435049 561
63 iso_pu_bacteria 2918501144 2918507903 561
64 iso_pu_bacteria 642555112 642598678 561
65 iso_pu_bacteria 2558860112 2558914811 562
66 iso_pu_bacteria 2513237166 2514051371 563
67 iso_pu_bacteria 2885270888 2885277048 564
68 iso_pu_bacteria 8020945358 8020952946 564
69 3300036712 Ga0316584_0018284 Ga0316584_0018284_1597_3348 565
70 3300049571 Ga0501034_0013269 Ga0501034_0013269_4290_6065 565
71 3300006042 Ga0075368_10015775 Ga0075368_100157752 566
72 3300027866 Ga0209813_10003102 Ga0209813_100031022 566
73 3300033528 Ga0316588_1004437 Ga0316588_10044372 566
74 3300035724 Ga0373933_0009142 Ga0373933_0009142_3457_5286 566
75 3300036401 Ga0373937_0015838 Ga0373937_0015838_3756_5585 566
76 3300046455 Ga0495603_0000735 Ga0495603_0000735_11342_13135 566
77 3300046462 Ga0495651_0092460 Ga0495651_0092460_116_1879 566
78 3300046463 Ga0495653_0038398 Ga0495653_0038398_1854_3683 566
79 3300046477 Ga0495664_0015134 Ga0495664_0015134_2030_3859 566
80 3300046511 Ga0495608_0015706 Ga0495608_0015706_1270_3099 566
81 3300046516 Ga0495628_0021355 Ga0495628_0021355_3446_5275 566
82 3300046516 Ga0495628_0024172 Ga0495628_0024172_3038_4876 566
83 3300046536 Ga0495587_0003660 Ga0495587_0003660_5964_7793 566
84 3300046559 Ga0495667_0005025 Ga0495667_0005025_1689_3518 566
85 3300046675 Ga0495657_0025034 Ga0495657_0025034_635_2464 566
86 3300046679 Ga0495623_0000571 Ga0495623_0000571_1207_2970 566
87 3300047317 Ga0495604_0001597 Ga0495604_0001597_6583_8346 566
88 3300047321 Ga0495676_0003851 Ga0495676_0003851_5515_7308 566
89 3300047321 Ga0495676_0008342 Ga0495676_0008342_7154_8944 566
90 3300047444 Ga0495675_0063853 Ga0495675_0063853_374_2137 566
91 3300048088 Ga0495602_0013025 Ga0495602_0013025_4986_6815 566
92 3300049568 Ga0501031_0005131 Ga0501031_0005131_3240_5039 566
93 3300049581 Ga0501047_0044573 Ga0501047_0044573_1373_3136 566
94 3300049589 Ga0501073_0050656 Ga0501073_0050656_887_2653 566
95 3300050495 nmdc:mga04h51_2937_c1 nmdc:mga04h51_2937_c1_1316_3106 566
96 3300053078 Ga0495612_0005664 Ga0495612_0005664_2980_4809 566
97 3300053085 Ga0495619_0024865 Ga0495619_0024865_489_2318 566
98 3300013105 Ga0157369_10000059 Ga0157369_1000005999 567
99 3300025256 Ga0209759_1000488 Ga0209759_100048826 567
100 3300025294 Ga0209025_1000754 Ga0209025_10007544 567
101 3300031727 Ga0316576_10057088 Ga0316576_100570882 567
102 3300031824 Ga0307413_10007973 Ga0307413_100079733 567
103 3300032002 Ga0307416_100009570 Ga0307416_1000095704 567
104 3300035085 Ga0373929_0000010 Ga0373929_0000010_124721_126484 567
105 3300036712 Ga0316584_0024251 Ga0316584_0024251_848_2620 567
106 3300042876 Ga0451577_0045400 Ga0451577_0045400_1584_3350 567
107 3300045051 Ga0451576_0000168 Ga0451576_0000168_126277_128055 567
108 3300047318 Ga0495636_0003343 Ga0495636_0003343_2553_4322 567
109 3300048908 Ga0496105_0101900 Ga0496105_0101900_440_2233 567
110 3300049568 Ga0501031_0053071 Ga0501031_0053071_588_2390 567
111 3300049570 Ga0501033_0048827 Ga0501033_0048827_788_2560 567
112 3300049574 Ga0501038_0065163 Ga0501038_0065163_752_2512 567
113 3300049574 Ga0501038_0086082 Ga0501038_0086082_455_2257 567
114 3300049575 Ga0501039_0044148 Ga0501039_0044148_750_2552 567
115 3300049578 Ga0501042_0017593 Ga0501042_0017593_939_2741 567
116 3300049580 Ga0501046_0048384 Ga0501046_0048384_1513_3285 567
117 3300049582 Ga0501048_0041003 Ga0501048_0041003_435_2237 567
118 3300049587 Ga0501071_0057391 Ga0501071_0057391_617_2419 567
119 3300049588 Ga0501072_0011822 Ga0501072_0011822_4345_6147 567
120 3300049588 Ga0501072_0107793 Ga0501072_0107793_446_2206 567
121 3300049591 Ga0501075_0015729 Ga0501075_0015729_23_1819 567
122 3300049592 Ga0501076_0038778 Ga0501076_0038778_1872_3674 567
123 3300049593 Ga0501077_0053780 Ga0501077_0053780_642_2444 567
124 3300049743 Ga0501081_0016240 Ga0501081_0016240_391_2187 567
125 3300060353 Ga0501082_0055430 Ga0501082_0055430_976_2778 567
126 3300061734 Ga0530510_0045497 Ga0530510_0045497_334_2094 567
127 iso_pu_bacteria 2867475112 2867481386 567
128 iso_pu_bacteria 2870068957 2870076884 567
129 iso_pu_bacteria 3006486233 3006491924 567
130 iso_pu_bacteria 8048406513 8048408599 567
131 3300031727 Ga0316576_10052094 Ga0316576_100520941 568
132 3300031728 Ga0316578_10010820 Ga0316578_100108203 568
133 iso_pu_bacteria 2863067949 2863073145 568
134 3300005435 Ga0070714_100000001 Ga0070714_100000001309 570
135 3300025929 Ga0207664_10000007 Ga0207664_10000007299 570
136 3300025914 Ga0207671_10000608 Ga0207671_1000060821 571
137 3300031728 Ga0316578_10031481 Ga0316578_100314812 571
138 3300035398 Ga0316574_0008630 Ga0316574_0008630_135_1937 571
139 3300036647 Ga0316582_0064360 Ga0316582_0064360_195_1997 571
140 3300044693 Ga0466961_0011503 Ga0466961_0011503_3395_5203 571
141 3300049572 Ga0501036_0004573 Ga0501036_0004573_3358_5163 571
142 3300049577 Ga0501041_0016717 Ga0501041_0016717_362_2167 571
143 3300049582 Ga0501048_0027031 Ga0501048_0027031_2262_4067 571
144 3300049587 Ga0501071_0013063 Ga0501071_0013063_3474_5279 571
145 3300049588 Ga0501072_0005232 Ga0501072_0005232_7847_9652 571
146 3300049592 Ga0501076_0002085 Ga0501076_0002085_752_2557 571
147 3300049741 Ga0501079_0071777 Ga0501079_0071777_58_1851 571
148 3300049742 Ga0501080_0073425 Ga0501080_0073425_1227_3032 571
149 3300049743 Ga0501081_0005860 Ga0501081_0005860_3619_5424 571
150 3300049824 Ga0501045_0000452 Ga0501045_0000452_18172_19977 571
151 3300061734 Ga0530510_0007918 Ga0530510_0007918_774_2579 571
152 3300006042 Ga0075368_10007838 Ga0075368_100078385 572
153 3300006178 Ga0075367_10004815 Ga0075367_100048154 572
154 3300031727 Ga0316576_10001546 Ga0316576_1000154610 572
155 3300031730 Ga0307516_10003041 Ga0307516_100030419 572
156 3300033527 Ga0316586_1000229 Ga0316586_10002294 572
157 3300033528 Ga0316588_1000529 Ga0316588_10005291 572
158 3300049570 Ga0501033_0020938 Ga0501033_0020938_131_1930 572
159 3300049571 Ga0501034_0013696 Ga0501034_0013696_4103_5884 572
160 3300049572 Ga0501036_0018402 Ga0501036_0018402_2157_3932 572
161 3300049572 Ga0501036_0045151 Ga0501036_0045151_124_1923 572
162 3300049574 Ga0501038_0097036 Ga0501038_0097036_199_1974 572
163 3300049575 Ga0501039_0081208 Ga0501039_0081208_129_1928 572
164 3300049576 Ga0501040_0089418 Ga0501040_0089418_237_2036 572
165 3300049577 Ga0501041_0007086 Ga0501041_0007086_3149_4924 572
166 3300049580 Ga0501046_0055772 Ga0501046_0055772_1122_2921 572
167 3300049582 Ga0501048_0007600 Ga0501048_0007600_6258_8057 572
168 3300049588 Ga0501072_0002697 Ga0501072_0002697_2222_3997 572
169 3300049588 Ga0501072_0030145 Ga0501072_0030145_156_1955 572
170 3300049591 Ga0501075_0007727 Ga0501075_0007727_3744_5519 572
171 3300049592 Ga0501076_0031409 Ga0501076_0031409_162_1961 572
172 3300049593 Ga0501077_0006385 Ga0501077_0006385_180_1979 572
173 3300049741 Ga0501079_0006047 Ga0501079_0006047_168_1967 572
174 3300049824 Ga0501045_0014240 Ga0501045_0014240_142_1941 572
175 3300060353 Ga0501082_0018812 Ga0501082_0018812_216_1991 572
176 3300060353 Ga0501082_0033079 Ga0501082_0033079_2185_3984 572
177 3300005435 Ga0070714_100011908 Ga0070714_1000119089 573
178 3300005614 Ga0068856_100005742 Ga0068856_1000057422 573
179 3300025929 Ga0207664_10000423 Ga0207664_1000042310 573
180 3300031691 Ga0316579_10032078 Ga0316579_100320782 573
181 3300031727 Ga0316576_10044812 Ga0316576_100448122 573
182 3300031727 Ga0316576_10045940 Ga0316576_100459402 573
183 3300031731 Ga0307405_10059534 Ga0307405_100595342 573
184 3300031733 Ga0316577_10075067 Ga0316577_100750671 573
185 3300031852 Ga0307410_10002524 Ga0307410_100025247 573
186 3300031995 Ga0307409_100020129 Ga0307409_1000201293 573
187 3300032004 Ga0307414_10028517 Ga0307414_100285172 573
188 3300032133 Ga0316583_10021958 Ga0316583_100219581 573
189 3300032139 Ga0316580_10013068 Ga0316580_100130682 573
190 3300033527 Ga0316586_1001002 Ga0316586_10010021 573
191 3300033529 Ga0316587_1005723 Ga0316587_10057231 573
192 3300036712 Ga0316584_0000975 Ga0316584_0000975_2457_4298 573
193 3300036712 Ga0316584_0005059 Ga0316584_0005059_166_2013 573
194 3300037588 Ga0316581_0004401 Ga0316581_0004401_773_2575 573
195 3300049571 Ga0501034_0078263 Ga0501034_0078263_1198_3039 573
196 iso_pu_bacteria 2939598168 2939600804 573
197 3300005327 Ga0070658_10135045 Ga0070658_101350451 574
198 3300013100 Ga0157373_10028259 Ga0157373_100282592 574
199 3300013105 Ga0157369_10052327 Ga0157369_100523271 574
200 3300013105 Ga0157369_10072585 Ga0157369_100725853 574
201 3300031548 Ga0307408_100017650 Ga0307408_1000176506 574
202 3300031911 Ga0307412_10043417 Ga0307412_100434172 574
203 3300038443 Ga0395901_0040046 Ga0395901_0040046_2685_4553 574
204 3300046463 Ga0495653_0058368 Ga0495653_0058368_74_1978 574
205 3300046475 Ga0495639_0002965 Ga0495639_0002965_5377_7260 574
206 3300046476 Ga0495662_0002270 Ga0495662_0002270_7420_9309 574
207 3300046477 Ga0495664_0004073 Ga0495664_0004073_190_2079 574
208 3300046517 Ga0495630_0064312 Ga0495630_0064312_616_2520 574
209 3300046531 Ga0495665_0000402 Ga0495665_0000402_8849_10738 574
210 3300046535 Ga0495586_0013803 Ga0495586_0013803_1957_3840 574
211 3300046536 Ga0495587_0013517 Ga0495587_0013517_1723_3612 574
212 3300046543 Ga0495645_0000495 Ga0495645_0000495_11900_13789 574
213 3300046559 Ga0495667_0000098 Ga0495667_0000098_30503_32407 574
214 3300046674 Ga0495588_0020933 Ga0495588_0020933_1099_2982 574
215 3300046809 Ga0495600_0001416 Ga0495600_0001416_7246_9150 574
216 3300047444 Ga0495675_0002875 Ga0495675_0002875_155_2059 574
217 3300047673 Ga0495593_0030328 Ga0495593_0030328_693_2576 574
218 3300049571 Ga0501034_0000010 Ga0501034_0000010_135743_137563 574
219 3300049573 Ga0501037_0005537 Ga0501037_0005537_2682_4493 574
220 3300059643 Ga0587072_001359 Ga0587072_001359_276_2093 574
221 iso_pu_bacteria 2690315906 2691512093 574
222 iso_pu_bacteria 2775506735 2775655575 574
223 iso_pu_bacteria 2808606357 2808828302 574
224 iso_pu_bacteria 2808606360 2808849547 574
225 iso_pu_bacteria 2808606366 2808877862 574
226 iso_pu_bacteria 2808606370 2808891005 574
227 iso_pu_bacteria 2808606371 2808895373 574
228 iso_pu_bacteria 2808606372 2808903058 574
229 iso_pu_bacteria 2811994871 2812319971 574
230 iso_pu_bacteria 2811994872 2812323948 574
231 iso_pu_bacteria 2870628048 2870628072 574
232 iso_pu_bacteria 2945916053 2945917726 574
233 iso_pu_bacteria 2946059875 2946061535 574
234 iso_pu_bacteria 8004025490 8004028442 574

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13193

AMP-binding_C

AMP-binding enzyme C-terminal domain

498

576

0.95

PF00501

AMP-binding

AMP-binding enzyme

63

448

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
4u5y-assembly1.cif.gz_D crystal structure of the complex between the gnat domain of s. lividans pat and the acetyl-coa synthetase c-terminal domain of s. enterica 0.9281 483 571
3ivr-assembly1.cif.gz_B crystal structure of putative long-chain-fatty-acid coa ligase from rhodopseudomonas palustris cga009 0.9152 43 470
7kdn-assembly3.cif.gz_C crystal structure of acetyl-coa synthetase in complex with adenosine-5'-propylphosphate from aspergillus fumigatus 0.9112 5 470
3gpc-assembly2.cif.gz_B crystal structure of human acyl-coa synthetase medium-chain family member 2a (l64p mutation) in a complex with coa 0.9109 38 571
3ivr-assembly1.cif.gz_B crystal structure of putative long-chain-fatty-acid coa ligase from rhodopseudomonas palustris cga009 0.9108 43 470
ID Description Score Start End Superfamily
af_Q2G294_455_568_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9925 473 571 3.30.300.30
af_Q2G294_6_454_3.40.50.12780 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.9607 14 472 3.40.50.12780
af_P27550_518_652_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9602 473 570 3.30.300.30
3etcA02 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9596 472 556 3.30.300.30
af_Q2G294_6_454_3.40.50.12780 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.9503 14 472 3.40.50.12780
ID Description Score Start End GO Terms
AF-A0A534QDL1-F1-model_v4 Acyl-CoA synthetase 0.9604 14 389 GO:0000166
GO:0004321
GO:0006633
GO:0006637
GO:0015645
AF-A0A534QDL1-F1-model_v4 Acyl-CoA synthetase 0.9577 14 389 GO:0000166
GO:0004321
GO:0006633
GO:0006637
GO:0015645
AF-K1XCL9-F1-model_v4 Acetyl-CoA synthetase 0.9407 1 250 GO:0003987
GO:0005829
GO:0006085
GO:0016020
AF-A0A382Q5U2-F1-model_v4 AMP-dependent synthetase/ligase domain-containing protein 0.9383 46 252 GO:0003987
GO:0005829
GO:0006085
AF-W4V599-F1-model_v4 Long-chain-fatty-acid-CoA ligase 0.9364 48 180 GO:0016874

Feature Viewer

pLDDT pTM Quality
89.97 0.83 High
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Predicted Structure (AlphaFold2)

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