F346148

General Info

Members Datasets Scaffolds Average Seq Length
233 116 466 252

Family's Representative Sequence

Representative Sequence 3300021388|Ga0213875_10001216|Ga0213875_100012166
Length 279
Sequence MGSRHRYSTQAPRGAAGGGNRVSGIAEDTQPVAFRSRVLGNRLLASLPADDRSTLERAGEVVRLDRGMVLCDIGQDVHSTFFPGAGTVASFVLLLRDGRTVEAATIGCEGAIGGIVSSGHKPAFARAEVQIGGAALRVPIERLEELKSTSFALRDVFTRYADFLLAQVMQSVACNAFHALEARCCRWLLTTRDRVGADDIRLTQESLAEMLGVQRTTVSSIARSLQSQGLISYSRGLIRMLDRDGVRAVACECYENVEAHFAAVLPELVRPARIVDLKR

Samples

Sample ID Description Type Environment
1 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
42 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
45 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
46 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
47 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
48 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
49 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
50 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
51 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
87 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
88 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
89 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
90 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
91 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
92 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
93 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
94 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
95 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
96 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
97 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
98 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
99 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
100 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
101 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
102 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
103 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
104 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
105 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
106 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
107 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
108 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
109 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
110 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
111 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
112 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
113 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
114 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
115 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
116 2874628541 Bradyrhizobium betae Opo-243 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.57
Metatranscriptomes 0
Isolates 0.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.43
Nodule 0
Rhizoplane 0
Rhizosphere 95.71
Stem 0
Stem Tuber 0
Unclassified 1.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0213875_10001216 3300021388 Bacteria 17452
2 Ga0065712_10119411 3300005290 Bacteria 1692
3 Ga0065715_10000654 3300005293 Bacteria 13208
4 Ga0070658_10000002 3300005327 Bacteria 637290
5 Ga0070658_10034179 3300005327 Bacteria 4091
6 Ga0070676_10000723 3300005328 Bacteria 16161
7 Ga0070683_100292884 3300005329 Bacteria 1548
8 Ga0070670_100221675 3300005331 Bacteria 1645
9 Ga0070670_100253440 3300005331 Bacteria 1534
10 Ga0070677_10043917 3300005333 Bacteria 1777
11 Ga0070677_10111436 3300005333 Bacteria 1222
12 Ga0070680_100038909 3300005336 Bacteria 3847
13 Ga0070680_100142598 3300005336 Bacteria 2009
14 Ga0070660_100000137 3300005339 Bacteria 46762
15 Ga0070660_100001341 3300005339 Bacteria 16726
16 Ga0070661_100000282 3300005344 Bacteria 41047
17 Ga0070661_100349212 3300005344 Bacteria 1160
18 Ga0070661_100543330 3300005344 Bacteria 934
19 Ga0070692_10037602 3300005345 Bacteria 2462
20 Ga0070668_100005952 3300005347 Bacteria 9042
21 Ga0070668_100043506 3300005347 Bacteria 3444
22 Ga0070668_100045452 3300005347 Bacteria 3369
23 Ga0070668_100603162 3300005347 Bacteria 961
24 Ga0070669_100002902 3300005353 Bacteria 12356
25 Ga0070669_100077140 3300005353 Bacteria 2475
26 Ga0070675_100002886 3300005354 Bacteria 12958
27 Ga0070671_100017036 3300005355 Bacteria 5877
28 Ga0070674_100003058 3300005356 Bacteria 9310
29 Ga0070673_100015242 3300005364 Bacteria 5393
30 Ga0070659_100014442 3300005366 Bacteria 5902
31 Ga0070659_100021746 3300005366 Bacteria 4891
32 Ga0070659_100153894 3300005366 Bacteria 1877
33 Ga0070701_10162496 3300005438 Bacteria 1295
34 Ga0070663_100006862 3300005455 Bacteria 6890
35 Ga0070663_100154572 3300005455 Bacteria 1762
36 Ga0070678_100102955 3300005456 Bacteria 2217
37 Ga0070662_100016179 3300005457 Bacteria 5005
38 Ga0070662_100018029 3300005457 Bacteria 4769
39 Ga0070681_10090741 3300005458 Bacteria 3006
40 Ga0070679_100000112 3300005530 Bacteria 63894
41 Ga0070679_100026909 3300005530 Bacteria 5655
42 Ga0070679_100245439 3300005530 Bacteria 1747
43 Ga0068853_100171217 3300005539 Bacteria 1964
44 Ga0070665_100251740 3300005548 Bacteria 1767
45 Ga0070665_100652061 3300005548 Bacteria 1066
46 Ga0070664_100012413 3300005564 Bacteria 6922
47 Ga0068857_100292600 3300005577 Bacteria 1500
48 Ga0068859_100005561 3300005617 Bacteria 12836
49 Ga0068864_100237721 3300005618 Bacteria 1687
50 Ga0068864_100487109 3300005618 Bacteria 1184
51 Ga0068861_100026419 3300005719 Bacteria 4220
52 Ga0068870_10043880 3300005840 Bacteria 2334
53 Ga0068860_100328084 3300005843 Bacteria 1503
54 Ga0068862_100007156 3300005844 Bacteria 9260
55 Ga0068862_100084683 3300005844 Bacteria 2755
56 Ga0097621_100175179 3300006237 Bacteria 1851
57 Ga0097620_100005561 3300006931 Bacteria 12836
58 Ga0105243_10325649 3300009148 Bacteria 1402
59 Ga0105248_10104701 3300009177 Bacteria 3190
60 Ga0105249_10015973 3300009553 Bacteria 6655
61 Ga0105249_10033666 3300009553 Bacteria 4640
62 Ga0157373_10026122 3300013100 Bacteria 4220
63 Ga0157373_10395695 3300013100 Bacteria 990
64 Ga0157371_10024982 3300013102 Bacteria 4359
65 Ga0157371_10097739 3300013102 Bacteria 2081
66 Ga0157369_10005364 3300013105 Bacteria 14931
67 Ga0157372_10460750 3300013307 Bacteria 1482
68 Ga0163163_10313204 3300014325 Bacteria 1623
69 Ga0157380_10002361 3300014326 Bacteria 12689
70 Ga0157380_10094291 3300014326 Bacteria 2477
71 Ga0157380_10122974 3300014326 Bacteria 2201
72 Ga0157380_10413520 3300014326 Bacteria 1284
73 Ga0163161_10082877 3300017792 Bacteria 2364
74 Ga0213873_10000049 3300021358 Bacteria 26948
75 Ga0213876_10000021 3300021384 Bacteria 260105
76 Ga0213876_10001301 3300021384 Bacteria 15719
77 Ga0213876_10051554 3300021384 Bacteria 2175
78 Ga0209233_1009130 3300025261 Bacteria 3031
79 Ga0207697_10000628 3300025315 Bacteria 20080
80 Ga0207682_10049031 3300025893 Bacteria 1742
81 Ga0207688_10020823 3300025901 Bacteria 3580
82 Ga0207643_10015059 3300025908 Bacteria 4205
83 Ga0207705_10000008 3300025909 Bacteria 589717
84 Ga0207705_10091117 3300025909 Bacteria 2233
85 Ga0207707_10088028 3300025912 Bacteria 2713
86 Ga0207660_10027018 3300025917 Bacteria 3912
87 Ga0207660_10045934 3300025917 Bacteria 3080
88 Ga0207657_10024826 3300025919 Bacteria 5541
89 Ga0207649_10000212 3300025920 Bacteria 48063
90 Ga0207652_10000001 3300025921 Bacteria 1006643
91 Ga0207652_10440549 3300025921 Unclassified 1174
92 Ga0207681_10016807 3300025923 Bacteria 4585
93 Ga0207681_10022169 3300025923 Bacteria 4047
94 Ga0207650_10002008 3300025925 Bacteria 14261
95 Ga0207659_10004459 3300025926 Bacteria 8474
96 Ga0207644_10007585 3300025931 Bacteria 7073
97 Ga0207690_10051338 3300025932 Bacteria 2758
98 Ga0207690_10241748 3300025932 Unclassified 1391
99 Ga0207706_10000475 3300025933 Bacteria 42955
100 Ga0207706_10003718 3300025933 Bacteria 14556
101 Ga0207709_10255489 3300025935 Bacteria 1282
102 Ga0207669_10001298 3300025937 Bacteria 10609
103 Ga0207691_10004641 3300025940 Bacteria 13301
104 Ga0207661_10630286 3300025944 Unclassified 985
105 Ga0207679_10023823 3300025945 Bacteria 4191
106 Ga0207667_10428768 3300025949 Bacteria 1345
107 Ga0207651_10004216 3300025960 Bacteria 7207
108 Ga0207712_10008603 3300025961 Bacteria 6451
109 Ga0207712_10016263 3300025961 Bacteria 4813
110 Ga0207668_10003189 3300025972 Bacteria 9609
111 Ga0207668_10203540 3300025972 Bacteria 1578
112 Ga0207639_10238008 3300026041 Bacteria 1581
113 Ga0207678_10001415 3300026067 Bacteria 21990
114 Ga0207678_10023639 3300026067 Bacteria 5374
115 Ga0207676_10011824 3300026095 Bacteria 6245
116 Ga0207676_10170826 3300026095 Bacteria 1894
117 Ga0207675_100022986 3300026118 Bacteria 5799
118 Ga0207683_10251138 3300026121 Bacteria 1614
119 Ga0209983_1028531 3300027665 Bacteria 1184
120 Ga0209974_10011005 3300027876 Bacteria 3045
121 Ga0209974_10013046 3300027876 Bacteria 2771
122 Ga0268266_10386488 3300028379 Bacteria 1321
123 Ga0268266_10524522 3300028379 Bacteria 1133
124 Ga0268265_10073709 3300028380 Bacteria 2667
125 Ga0268264_10428267 3300028381 Bacteria 1277
126 Ga0307408_100062095 3300031548 Bacteria 2729
127 Ga0307408_100104382 3300031548 Bacteria 2165
128 Ga0307408_100127080 3300031548 Bacteria 1984
129 Ga0307408_100138135 3300031548 Bacteria 1909
130 Ga0307408_100289373 3300031548 Bacteria 1367
131 Ga0307408_100333981 3300031548 Bacteria 1281
132 Ga0307408_100356436 3300031548 Bacteria 1243
133 Ga0307405_10013024 3300031731 Bacteria 4425
134 Ga0307405_10026962 3300031731 Bacteria 3324
135 Ga0307405_10028785 3300031731 Bacteria 3240
136 Ga0307405_10065032 3300031731 Bacteria 2320
137 Ga0307405_10078096 3300031731 Bacteria 2153
138 Ga0307405_10179256 3300031731 Bacteria 1519
139 Ga0307405_10478477 3300031731 Bacteria 993
140 Ga0307413_10000322 3300031824 Bacteria 14948
141 Ga0307413_10041578 3300031824 Bacteria 2692
142 Ga0307413_10417216 3300031824 Bacteria 1056
143 Ga0307410_10019806 3300031852 Bacteria 4101
144 Ga0307410_10035082 3300031852 Bacteria 3255
145 Ga0307410_10051473 3300031852 Bacteria 2776
146 Ga0307406_10012451 3300031901 Bacteria 4852
147 Ga0307406_10017897 3300031901 Bacteria 4133
148 Ga0307406_10025647 3300031901 Bacteria 3531
149 Ga0307406_10029200 3300031901 Bacteria 3338
150 Ga0307406_10090542 3300031901 Bacteria 2058
151 Ga0307406_10102402 3300031901 Bacteria 1953
152 Ga0307406_10140952 3300031901 Bacteria 1706
153 Ga0307407_10040681 3300031903 Bacteria 2594
154 Ga0307407_10053210 3300031903 Bacteria 2328
155 Ga0307407_10056872 3300031903 Bacteria 2267
156 Ga0307407_10099169 3300031903 Bacteria 1804
157 Ga0307407_10161774 3300031903 Bacteria 1465
158 Ga0307412_10026670 3300031911 Bacteria 3594
159 Ga0307412_10062515 3300031911 Bacteria 2507
160 Ga0307412_10070516 3300031911 Bacteria 2382
161 Ga0307412_10092693 3300031911 Bacteria 2117
162 Ga0307412_10107014 3300031911 Bacteria 1989
163 Ga0307412_10245781 3300031911 Bacteria 1387
164 Ga0307409_100005161 3300031995 Bacteria 7465
165 Ga0307409_100054166 3300031995 Bacteria 3088
166 Ga0307409_100145027 3300031995 Bacteria 2051
167 Ga0307409_100277700 3300031995 Bacteria 1546
168 Ga0307409_100282710 3300031995 Bacteria 1534
169 Ga0307409_100322507 3300031995 Bacteria 1446
170 Ga0307409_100349408 3300031995 Bacteria 1395
171 Ga0307409_100368399 3300031995 Bacteria 1361
172 Ga0307409_100569400 3300031995 Bacteria 1115
173 Ga0307409_100586404 3300031995 Bacteria 1100
174 Ga0307409_100597125 3300031995 Bacteria 1090
175 Ga0307416_100125266 3300032002 Bacteria 2300
176 Ga0307416_100199571 3300032002 Bacteria 1897
177 Ga0307416_100255935 3300032002 Bacteria 1707
178 Ga0307416_100263413 3300032002 Bacteria 1686
179 Ga0307416_100385969 3300032002 Bacteria 1432
180 Ga0307416_100461529 3300032002 Bacteria 1325
181 Ga0307416_100899058 3300032002 Bacteria 985
182 Ga0307414_10029701 3300032004 Bacteria 3561
183 Ga0307414_10044098 3300032004 Bacteria 3042
184 Ga0307414_10079921 3300032004 Bacteria 2389
185 Ga0307414_10096768 3300032004 Bacteria 2210
186 Ga0307414_10114705 3300032004 Bacteria 2059
187 Ga0307414_10151645 3300032004 Bacteria 1829
188 Ga0307414_10269204 3300032004 Bacteria 1426
189 Ga0307414_10324093 3300032004 Bacteria 1312
190 Ga0307414_10751039 3300032004 Bacteria 886
191 Ga0307411_10003016 3300032005 Bacteria 7675
192 Ga0307411_10041353 3300032005 Bacteria 2932
193 Ga0307411_10046001 3300032005 Bacteria 2810
194 Ga0307411_10054470 3300032005 Bacteria 2626
195 Ga0307411_10061984 3300032005 Bacteria 2492
196 Ga0307411_10104523 3300032005 Bacteria 2011
197 Ga0307411_10149922 3300032005 Bacteria 1731
198 Ga0307411_10158089 3300032005 Bacteria 1693
199 Ga0307411_10173826 3300032005 Bacteria 1627
200 Ga0307411_10188902 3300032005 Bacteria 1571
201 Ga0307411_10398914 3300032005 Bacteria 1136
202 Ga0307415_100024795 3300032126 Bacteria 3753
203 Ga0307415_100040729 3300032126 Bacteria 3080
204 Ga0307415_100286893 3300032126 Bacteria 1356
205 Ga0307415_100409946 3300032126 Bacteria 1159
206 Ga0307415_100477438 3300032126 Bacteria 1084
207 Ga0395900_0084777 3300037418 Bacteria 3256
208 Ga0395900_0091597 3300037418 Bacteria 3124
209 Ga0395905_0218983 3300037471 Bacteria 1782
210 Ga0436364_1219772 3300037853 Bacteria 9307
211 Ga0436365_0618060 3300039437 Bacteria 25583
212 Ga0436365_1172338 3300039437 Bacteria 15878
213 Ga0436365_1214862 3300039437 Bacteria 4864
214 Ga0436362_0126459 3300039453 Bacteria 236400
215 Ga0439434_0144866 3300042435 Bacteria 784
216 Ga0439460_0112603 3300042461 Bacteria 884
217 Ga0466967_0037141 3300045976 Bacteria 4165
218 Ga0466967_1048979 3300045976 Bacteria 812
219 Ga0495663_0000681 3300046525 Bacteria 11718
220 Ga0495598_0012915 3300046537 Bacteria 2060
221 Ga0495621_0000022 3300046539 Bacteria 28970
222 Ga0495621_0000400 3300046539 Bacteria 10696
223 Ga0495621_0014605 3300046539 Bacteria 2488
224 Ga0495659_0022096 3300046664 Bacteria 2148
225 Ga0495659_0059592 3300046664 Bacteria 1407
226 Ga0495669_0089944 3300046684 Bacteria 1416
227 Ga0495670_0010931 3300046691 Bacteria 4462
228 Ga0495670_0015797 3300046691 Bacteria 3710
229 Ga0501071_0119159 3300049587 Bacteria 1956
230 Ga0501202_058177 3300049652 Bacteria 869
231 Ga0501243_017512 3300049675 Bacteria 1162
232 Ga0501245_007122 3300049708 Bacteria 1577
233 2874634019 2874628541 Bacteria 8630250
234 Ga0213875_10001216
235 Ga0065712_10119411
236 Ga0065715_10000654
237 Ga0070658_10000002
238 Ga0070658_10034179
239 Ga0070676_10000723
240 Ga0070683_100292884
241 Ga0070670_100221675
242 Ga0070670_100253440
243 Ga0070677_10043917
244 Ga0070677_10111436
245 Ga0070680_100038909
246 Ga0070680_100142598
247 Ga0070660_100000137
248 Ga0070660_100001341
249 Ga0070661_100000282
250 Ga0070661_100349212
251 Ga0070661_100543330
252 Ga0070692_10037602
253 Ga0070668_100005952
254 Ga0070668_100043506
255 Ga0070668_100045452
256 Ga0070668_100603162
257 Ga0070669_100002902
258 Ga0070669_100077140
259 Ga0070675_100002886
260 Ga0070671_100017036
261 Ga0070674_100003058
262 Ga0070673_100015242
263 Ga0070659_100014442
264 Ga0070659_100021746
265 Ga0070659_100153894
266 Ga0070701_10162496
267 Ga0070663_100006862
268 Ga0070663_100154572
269 Ga0070678_100102955
270 Ga0070662_100016179
271 Ga0070662_100018029
272 Ga0070681_10090741
273 Ga0070679_100000112
274 Ga0070679_100026909
275 Ga0070679_100245439
276 Ga0068853_100171217
277 Ga0070665_100251740
278 Ga0070665_100652061
279 Ga0070664_100012413
280 Ga0068857_100292600
281 Ga0068859_100005561
282 Ga0068864_100237721
283 Ga0068864_100487109
284 Ga0068861_100026419
285 Ga0068870_10043880
286 Ga0068860_100328084
287 Ga0068862_100007156
288 Ga0068862_100084683
289 Ga0097621_100175179
290 Ga0097620_100005561
291 Ga0105243_10325649
292 Ga0105248_10104701
293 Ga0105249_10015973
294 Ga0105249_10033666
295 Ga0157373_10026122
296 Ga0157373_10395695
297 Ga0157371_10024982
298 Ga0157371_10097739
299 Ga0157369_10005364
300 Ga0157372_10460750
301 Ga0163163_10313204
302 Ga0157380_10002361
303 Ga0157380_10094291
304 Ga0157380_10122974
305 Ga0157380_10413520
306 Ga0163161_10082877
307 Ga0213873_10000049
308 Ga0213876_10000021
309 Ga0213876_10001301
310 Ga0213876_10051554
311 Ga0209233_1009130
312 Ga0207697_10000628
313 Ga0207682_10049031
314 Ga0207688_10020823
315 Ga0207643_10015059
316 Ga0207705_10000008
317 Ga0207705_10091117
318 Ga0207707_10088028
319 Ga0207660_10027018
320 Ga0207660_10045934
321 Ga0207657_10024826
322 Ga0207649_10000212
323 Ga0207652_10000001
324 Ga0207652_10440549
325 Ga0207681_10016807
326 Ga0207681_10022169
327 Ga0207650_10002008
328 Ga0207659_10004459
329 Ga0207644_10007585
330 Ga0207690_10051338
331 Ga0207690_10241748
332 Ga0207706_10000475
333 Ga0207706_10003718
334 Ga0207709_10255489
335 Ga0207669_10001298
336 Ga0207691_10004641
337 Ga0207661_10630286
338 Ga0207679_10023823
339 Ga0207667_10428768
340 Ga0207651_10004216
341 Ga0207712_10008603
342 Ga0207712_10016263
343 Ga0207668_10003189
344 Ga0207668_10203540
345 Ga0207639_10238008
346 Ga0207678_10001415
347 Ga0207678_10023639
348 Ga0207676_10011824
349 Ga0207676_10170826
350 Ga0207675_100022986
351 Ga0207683_10251138
352 Ga0209983_1028531
353 Ga0209974_10011005
354 Ga0209974_10013046
355 Ga0268266_10386488
356 Ga0268266_10524522
357 Ga0268265_10073709
358 Ga0268264_10428267
359 Ga0307408_100062095
360 Ga0307408_100104382
361 Ga0307408_100127080
362 Ga0307408_100138135
363 Ga0307408_100289373
364 Ga0307408_100333981
365 Ga0307408_100356436
366 Ga0307405_10013024
367 Ga0307405_10026962
368 Ga0307405_10028785
369 Ga0307405_10065032
370 Ga0307405_10078096
371 Ga0307405_10179256
372 Ga0307405_10478477
373 Ga0307413_10000322
374 Ga0307413_10041578
375 Ga0307413_10417216
376 Ga0307410_10019806
377 Ga0307410_10035082
378 Ga0307410_10051473
379 Ga0307406_10012451
380 Ga0307406_10017897
381 Ga0307406_10025647
382 Ga0307406_10029200
383 Ga0307406_10090542
384 Ga0307406_10102402
385 Ga0307406_10140952
386 Ga0307407_10040681
387 Ga0307407_10053210
388 Ga0307407_10056872
389 Ga0307407_10099169
390 Ga0307407_10161774
391 Ga0307412_10026670
392 Ga0307412_10062515
393 Ga0307412_10070516
394 Ga0307412_10092693
395 Ga0307412_10107014
396 Ga0307412_10245781
397 Ga0307409_100005161
398 Ga0307409_100054166
399 Ga0307409_100145027
400 Ga0307409_100277700
401 Ga0307409_100282710
402 Ga0307409_100322507
403 Ga0307409_100349408
404 Ga0307409_100368399
405 Ga0307409_100569400
406 Ga0307409_100586404
407 Ga0307409_100597125
408 Ga0307416_100125266
409 Ga0307416_100199571
410 Ga0307416_100255935
411 Ga0307416_100263413
412 Ga0307416_100385969
413 Ga0307416_100461529
414 Ga0307416_100899058
415 Ga0307414_10029701
416 Ga0307414_10044098
417 Ga0307414_10079921
418 Ga0307414_10096768
419 Ga0307414_10114705
420 Ga0307414_10151645
421 Ga0307414_10269204
422 Ga0307414_10324093
423 Ga0307414_10751039
424 Ga0307411_10003016
425 Ga0307411_10041353
426 Ga0307411_10046001
427 Ga0307411_10054470
428 Ga0307411_10061984
429 Ga0307411_10104523
430 Ga0307411_10149922
431 Ga0307411_10158089
432 Ga0307411_10173826
433 Ga0307411_10188902
434 Ga0307411_10398914
435 Ga0307415_100024795
436 Ga0307415_100040729
437 Ga0307415_100286893
438 Ga0307415_100409946
439 Ga0307415_100477438
440 Ga0395900_0084777
441 Ga0395900_0091597
442 Ga0395905_0218983
443 Ga0436364_1219772
444 Ga0436365_0618060
445 Ga0436365_1172338
446 Ga0436365_1214862
447 Ga0436362_0126459
448 Ga0439434_0144866
449 Ga0439460_0112603
450 Ga0466967_0037141
451 Ga0466967_1048979
452 Ga0495663_0000681
453 Ga0495598_0012915
454 Ga0495621_0000022
455 Ga0495621_0000400
456 Ga0495621_0014605
457 Ga0495659_0022096
458 Ga0495659_0059592
459 Ga0495669_0089944
460 Ga0495670_0010931
461 Ga0495670_0015797
462 Ga0501071_0119159
463 Ga0501202_058177
464 Ga0501243_017512
465 Ga0501245_007122
466 2874634019

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13545

HTH_Crp_2

Crp-like helix-turn-helix domain

182

249

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
5d4s-assembly1.cif.gz_B crystal structure of arar(dbd) in complex with operator orx1 0.8844 180 218
6hq5-assembly1.cif.gz_A structure of eal enzyme bd1971 - camp and cyclic-di-gmp bound form 0.872 38 119
8a3t-assembly1.cif.gz_T s. cerevisiae apc/c-cdh1 complex 0.8703 176 218
2ia2-assembly3.cif.gz_D the crystal structure of a putative transcriptional regulator rha06195 from rhodococcus sp. rha1 0.8609 180 220
2ptm-assembly1.cif.gz_A structure and rearrangements in the carboxy-terminal region of spih channels 0.859 11 132
ID Description Score Start End Superfamily
3dv8A02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9428 157 226 1.10.10.10
af_P9WMH5_174_242_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9409 156 225 1.10.10.10
3iwzA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9334 157 218 1.10.10.10
4n9iC02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9247 158 217 1.10.10.10
2gauA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9209 157 227 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A2W4KEA7-F1-model_v4 Crp/Fnr family transcriptional regulator 0.9686 19 241 GO:0003677
GO:0003700
GO:0005829
AF-A0A4Q3K066-F1-model_v4 deleted 0.9658 119 244
AF-A0A829YCJ4-F1-model_v4 Crp/Fnr family transcriptional regulator 0.964 17 243 GO:0003677
GO:0003700
GO:0005829
AF-Q1IN47-F1-model_v4 Cyclic nucleotide-binding protein 0.9629 18 242 GO:0003677
GO:0003700
GO:0005829
AF-A0A158CB81-F1-model_v4 Crp/FNR family transcriptional regulator 0.9627 18 230 GO:0003677
GO:0003700
GO:0005829

Map