F346143

General Info

Members Datasets Scaffolds Average Seq Length
233 183 135 703

Family's Representative Sequence

Representative Sequence 3300021321|Ga0214542_1015424|Ga0214542_10154242
Length 821
Sequence MAMRRKPAVYLRHAACTDRAGDGATQRVQVCNTIFTTFAQSQELAGTACVSGPRISQMKKSLLRAALLSMMCFTVALLHGQSGATPVDDPFLWLEEVEGPRALAWAQAENEKTLGLLQSDPRYDRFYRDALTILQAKDRIPYVSLKRQGLENFWQDESHVRGIWRRTTLESYRGQDPRWETILDFDALALAENKNWVYKGHSCLGRRCLVKLSDGGKDAVSIREFDSEAKSFVAGGFQLPEGRQSVSWIDRDTVLVARDWGEGTTTEAGFPFVLKELKRAQPLDQAREVFRGQHTDFKTLPFVLGAGRMDVTGVVRQINFFERQYVLFGPAGPIELDLPKKALIVGVASGRLLVKLDEDWIRSGDTGFKAGSMISYDLAEWRQDPLRAKPSVVFQPNCRQALSGFGSTRKFLVMTILDNLQSKAFVYRYDQGAWHATPVPLPKNATVSLSATSAQNDEMTFTVSTYLIPTSLWYFDAESKRLELLKTAPAKFDASKHVVEQLEATSRDGTRIPYFLVRPRSASFDGSTPTLLYGYGGFQIPRLPSYGGALGRLWLEQDNAYVVANVRGGGEFGPPWHRAGQGATKQKTWDDFIAVADDLIRRNVTSPRRLGVIGGSQGGLLVGAAITQRPELFNAAIIEAPLFDMLRFTYLGAGASWTAEYGDPAIPEQREWIEAYSPYQMLVPGKTYPEPFIFTSTKDDRVHPAHGRKAAAKLAALGQSYFYFENIDGGHSTAANLIERARRLALEYTYASRRSLPRATGRRTLNLAQQYCGRKLQLFHANERADVSKVEPTDQLLVDRIIDLYVWHHQAEQKSVSPVKR

Samples

Sample ID Description Type Environment
1 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
2 2513237092 Bradyrhizobium sp. WSM1743 Isolate Nodule
3 2513237096 Bradyrhizobium pachyrhizi USDA 3259 Isolate Nodule
4 2513237102 Bradyrhizobium japonicum USDA 135 Isolate Nodule
5 2513237104 Bradyrhizobium sp. EC3.3 Isolate Nodule
6 2513237139 Bradyrhizobium ottawaense USDA 4 Isolate Nodule
7 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
8 2517093001 Bradyrhizobium japonicum USDA 124 Isolate Nodule
9 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
10 2528768022 Bradyrhizobium japonicum USDA 123 Isolate Nodule
11 2547132103 Chromobacterium sp. C-61 Isolate Rhizosphere
12 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
13 2617270735 Bradyrhizobium shewense ERR11 Isolate Nodule
14 2617270741 Bradyrhizobium yuanmingense CCBAU 10071 Isolate Nodule
15 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
16 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
17 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
18 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
19 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
20 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
21 2802429603 Bradyrhizobium ottawaense L2 Isolate Nodule
22 2818991438 Novosphingobium barchaimii 1192 Isolate Unclassified
23 2824600985 Bradyrhizobium sp.HAMBI 2135 Isolate Unclassified
24 2824609381 Bradyrhizobium sp. HAMBI 2134 Isolate Unclassified
25 2824617872 Bradyrhizobium sp. HAMBI 2133 Isolate Unclassified
26 2824626560 Bradyrhizobium sp. HAMBI 2149 Isolate Unclassified
27 2824635225 Bradyrhizobium sp. HAMBI 2136 Isolate Unclassified
28 2824644064 Bradyrhizobium sp. HAMBI 2137 Isolate Unclassified
29 2824653114 Bradyrhizobium sp. HAMBI 2142 Isolate Unclassified
30 2824661429 Bradyrhizobium sp. HAMBI 2115 Isolate Unclassified
31 2824671348 Bradyrhizobium sp. HAMBI 2125 Isolate Unclassified
32 2824679649 Bradyrhizobium sp.HAMBI 2116 Isolate Unclassified
33 2824687955 Bradyrhizobium sp. HAMBI 2126 Isolate Unclassified
34 2824696289 Bradyrhizobium sp. HAMBI 2127 Isolate Unclassified
35 2824704595 Bradyrhizobium sp. HAMBI 2150 Isolate Unclassified
36 2824714736 Bradyrhizobium sp. HAMBI 2151 Isolate Unclassified
37 2824723954 Bradyrhizobium sp. HAMBI 2152 Isolate Unclassified
38 2824732956 Bradyrhizobium sp. HAMBI 2153 Isolate Unclassified
39 2824746037 Bradyrhizobium sp. HAMBI 2299 Isolate Unclassified
40 2824753945 Bradyrhizobium sp. HAMBI 2128 Isolate Unclassified
41 2824763712 Bradyrhizobium sp. HAMBI 2129 Isolate Unclassified
42 2838122688 Bradyrhizobium sp. CIR3A Isolate Nodule
43 2841941048 Bradyrhizobium sp. SBR1B Isolate Nodule
44 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
45 2841966195 Bradyrhizobium sp. CIR18 Isolate Nodule
46 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
47 2841983080 Bradyrhizobium sp. IAR9 Isolate Nodule
48 2843690924 Chromobacterium rhizoryzae JP2-74 Isolate Rhizosphere
49 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
50 2847930680 Bradyrhizobium zhanjiangense CCBAU 51778 Isolate Unclassified
51 2849560528 Caulobacter zeae 410 Isolate Unclassified
52 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
53 2851153111 Caulobacter radicis 736 Isolate Unclassified
54 2874612657 Bradyrhizobium forestalis INPA54B Isolate Nodule
55 2874620515 Bradyrhizobium nanningense CCBAU 53390 Isolate Unclassified
56 2879083081 Bradyrhizobium zhanjiangense CCBAU 51787 Isolate Unclassified
57 2881364244 Bradyrhizobium sp. RP6 Isolate Unclassified
58 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
59 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
60 2885427238 Sphingomonas mesophila SYSUP0001 Isolate Stem Tuber
61 2888378607 Bradyrhizobium sp. LCT2 Isolate Unclassified
62 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
63 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
64 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
65 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
66 2906643746 Bradyrhizobium genosp. SA-3 Rp7b Isolate Unclassified
67 2906660503 Bradyrhizobium brasilense UFLA 03-321 Isolate Unclassified
68 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
69 2908756301 Bradyrhizobium ivorense CI-41S Isolate Nodule
70 2908775508 Bradyrhizobium sp. SUTN9-2 Isolate Unclassified
71 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule
72 3005483717 Bradyrhizobium agreste CNPSo 4010 Isolate Unclassified
73 3005587118 Bradyrhizobium glycinis CNPSo 4016 Isolate Unclassified
74 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
75 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
76 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
77 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
78 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
79 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
80 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
81 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
82 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
83 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
84 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
85 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
86 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
87 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
88 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
89 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
90 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
91 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
92 3300006941 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW Metagenome Nodule
93 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
94 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
95 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
96 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
97 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
98 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
99 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
100 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
102 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
118 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
119 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
120 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
121 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
124 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
125 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
126 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
127 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
128 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
129 3300033442 Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 Metagenome Nodule
130 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
131 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
132 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
133 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
134 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
135 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
136 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
137 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
138 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
139 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
140 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
141 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
142 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
143 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
144 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
145 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
146 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
147 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
148 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
149 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
150 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
151 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
152 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
153 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
154 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
155 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
156 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
157 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
158 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
159 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
160 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
161 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
162 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
163 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
167 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
168 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
169 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
170 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
171 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
172 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
173 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
174 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
175 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
176 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
177 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
178 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
179 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
180 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
181 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
182 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere
183 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 58.8
Metatranscriptomes 0
Isolates 41.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.72
Nodule 22.75
Rhizoplane 1.72
Rhizosphere 40.77
Stem 0
Stem Tuber 0.43
Unclassified 29.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24744J21845_10001922 3300002077 Bacteria 4193
2 Ga0070677_10000422 3300005333 Bacteria 14606
3 Ga0068868_100000077 3300005338 Bacteria 58130
4 Ga0068868_100007227 3300005338 Bacteria 7893
5 Ga0070660_100001334 3300005339 Bacteria 16775
6 Ga0070660_100060534 3300005339 Bacteria 2938
7 Ga0070669_100086729 3300005353 Bacteria 2339
8 Ga0070675_100018567 3300005354 Bacteria 5538
9 Ga0070674_100002328 3300005356 Bacteria 10480
10 Ga0070659_100000021 3300005366 Bacteria 154212
11 Ga0070714_100016430 3300005435 Bacteria 5976
12 Ga0070694_100002425 3300005444 Bacteria 11003
13 Ga0070678_100026450 3300005456 Bacteria 3923
14 Ga0070665_100000287 3300005548 Bacteria 79790
15 Ga0070665_100040391 3300005548 Bacteria 4690
16 Ga0070704_100008008 3300005549 Bacteria 6310
17 Ga0068855_100022707 3300005563 Bacteria 7518
18 Ga0068863_100047218 3300005841 Bacteria 4085
19 Ga0068862_100017447 3300005844 Bacteria 5979
20 Ga0081455_10001158 3300005937 Bacteria 33051
21 Ga0075434_100070530 3300006871 Bacteria 3485
22 Ga0099825_1020619 3300006941 Bacteria 4646
23 Ga0105245_10020622 3300009098 Bacteria 5779
24 Ga0163162_10013507 3300013306 Bacteria 7973
25 Ga0157379_10035855 3300014968 Bacteria 4423
26 Ga0214544_1001102 3300021320 Bacteria 54570
27 Ga0214544_1009947 3300021320 Bacteria 14445
28 Ga0214544_1010449 3300021320 Bacteria 13647
29 Ga0214544_1013152 3300021320 Bacteria 10245
30 Ga0214542_1009214 3300021321 Bacteria 15567
31 Ga0214542_1015424 3300021321 Bacteria 7981
32 Ga0214542_1017218 3300021321 Bacteria 6635
33 Ga0214545_1010661 3300021324 Bacteria 13184
34 Ga0214545_1018042 3300021324 Bacteria 6578
35 Ga0214545_1023884 3300021324 Bacteria 3906
36 Ga0214543_1005207 3300021327 Bacteria 24099
37 Ga0214543_1012323 3300021327 Bacteria 11444
38 Ga0214543_1018645 3300021327 Bacteria 6282
39 Ga0214543_1020529 3300021327 Bacteria 5294
40 Ga0209050_1000643 3300025298 Bacteria 54150
41 Ga0209256_1009009 3300025299 Bacteria 4471
42 Ga0207697_10006571 3300025315 Bacteria 5247
43 Ga0207682_10000777 3300025893 Bacteria 14748
44 Ga0207682_10015494 3300025893 Bacteria 2967
45 Ga0207647_10047255 3300025904 Bacteria 2678
46 Ga0207645_10027783 3300025907 Bacteria 3652
47 Ga0207695_10000215 3300025913 Bacteria 155235
48 Ga0207657_10000228 3300025919 Bacteria 58838
49 Ga0207650_10041605 3300025925 Bacteria 3368
50 Ga0207659_10049674 3300025926 Bacteria 2976
51 Ga0207690_10000030 3300025932 Bacteria 156832
52 Ga0207706_10022093 3300025933 Bacteria 5709
53 Ga0207691_10032704 3300025940 Bacteria 4848
54 Ga0207677_10000027 3300026023 Bacteria 125785
55 Ga0207678_10018082 3300026067 Bacteria 6191
56 Ga0207648_10006350 3300026089 Bacteria 11757
57 Ga0207683_10023804 3300026121 Bacteria 5269
58 Ga0209389_1000194 3300027296 Bacteria 44616
59 Ga0209589_1000441 3300027357 Bacteria 57562
60 Ga0209489_100721 3300027361 Bacteria 65035
61 Ga0209489_110800 3300027361 Bacteria 9919
62 Ga0209489_110829 3300027361 Bacteria 9880
63 Ga0209700_100552 3300027363 Bacteria 71440
64 Ga0268266_10000058 3300028379 Bacteria 277346
65 Ga0268266_10000819 3300028379 Bacteria 40698
66 Ga0268265_10045746 3300028380 Bacteria 3268
67 Ga0307515_10043092 3300028794 Bacteria 7030
68 Ga0265338_10016491 3300028800 Bacteria 8032
69 Ga0265331_10005682 3300031250 Bacteria 7489
70 Ga0265327_10000028 3300031251 Bacteria 361066
71 Ga0316576_10010933 3300031727 Bacteria 5920
72 Ga0307409_100026642 3300031995 Bacteria 4081
73 Ga0315911_1000016 3300033442 Bacteria 166408
74 Ga0395900_0074382 3300037418 Bacteria 3493
75 Ga0436365_1797566 3300039437 Bacteria 6408
76 Ga0495627_000260 3300046453 Bacteria 54170
77 Ga0495590_0001470 3300046457 Bacteria 10163
78 Ga0495638_0000283 3300046460 Bacteria 67742
79 Ga0495650_0000347 3300046471 Bacteria 82253
80 Ga0495650_0000412 3300046471 Bacteria 69826
81 Ga0495596_0001994 3300046500 Bacteria 11240
82 Ga0495607_0000903 3300046501 Bacteria 27628
83 Ga0495610_0003754 3300046512 Bacteria 11620
84 Ga0495620_0030916 3300046515 Bacteria 2459
85 Ga0495631_0004007 3300046518 Bacteria 7939
86 Ga0495632_0000370 3300046519 Bacteria 42724
87 Ga0495648_0000733 3300046524 Bacteria 35083
88 Ga0495648_0002702 3300046524 Bacteria 16026
89 Ga0495609_0005269 3300046538 Bacteria 6861
90 Ga0495668_0000389 3300046616 Bacteria 57953
91 Ga0495625_0003121 3300046660 Bacteria 16925
92 Ga0495661_0004981 3300046665 Bacteria 9484
93 Ga0495649_0001887 3300046694 Bacteria 15324
94 Ga0495677_0000382 3300047445 Bacteria 19011
95 Ga0495677_0006719 3300047445 Bacteria 4329
96 Ga0495673_0000492 3300047469 Bacteria 42153
97 Ga0495673_0000614 3300047469 Bacteria 35232
98 Ga0495681_0000049 3300047470 Bacteria 109650
99 Ga0495686_0000132 3300047472 Bacteria 151609
100 Ga0495686_0000863 3300047472 Bacteria 38854
101 Ga0495686_0023122 3300047472 Bacteria 4105
102 Ga0495626_0019870 3300048091 Bacteria 3352
103 Ga0496102_0047675 3300048905 Bacteria 3895
104 Ga0496106_0004551 3300048909 Bacteria 10278
105 Ga0496107_0000034 3300048910 Bacteria 91621
106 Ga0496107_0034056 3300048910 Bacteria 3646
107 Ga0496116_0000060 3300048919 Bacteria 272219
108 Ga0496121_0000607 3300048924 Bacteria 67089
109 Ga0496121_0007835 3300048924 Bacteria 12773
110 Ga0496122_0012804 3300048925 Bacteria 8298
111 Ga0496123_0000761 3300048926 Bacteria 52188
112 Ga0496124_0002690 3300048927 Bacteria 22741
113 Ga0496124_0003113 3300048927 Bacteria 20580
114 Ga0496126_0000305 3300048929 Bacteria 104394
115 Ga0495678_000902 3300049459 Bacteria 26256
116 Ga0501032_0000562 3300049569 Bacteria 30104
117 Ga0501036_0008224 3300049572 Bacteria 8554
118 Ga0501047_0002332 3300049581 Bacteria 18141
119 Ga0501067_0000242 3300049583 Bacteria 30392
120 Ga0501069_0008945 3300049585 Bacteria 5282
121 Ga0501073_0000002 3300049589 Bacteria 323865
122 Ga0501077_0000010 3300049593 Bacteria 97557
123 Ga0501080_0015147 3300049742 Bacteria 7103
124 Ga0501044_0002439 3300049823 Bacteria 21205
125 nmdc:mga0n895_70730_c1 3300050512 Bacteria 3458
126 Ga0495601_0006595 3300053077 Bacteria 6788
127 Ga0500578_0000270 3300053086 Bacteria 64772
128 Ga0500562_000236 3300053108 Bacteria 14359
129 Ga0500562_000685 3300053108 Bacteria 8251
130 Ga0500594_0000122 3300053118 Bacteria 21741
131 Ga0500564_000033 3300053138 Bacteria 39298
132 Ga0500568_0004353 3300053139 Bacteria 7582
133 Ga0500604_0000048 3300053151 Bacteria 45446
134 Ga0500616_0000435 3300053153 Bacteria 55171
135 Ga0500622_0000553 3300053156 Bacteria 34248

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 3005483717 3005486083 581
2 iso_pu_bacteria 2824732956 2824735600 613
3 iso_pu_bacteria 2879083081 2879088860 642
4 3300005456 Ga0070678_100026450 Ga0070678_1000264503 654
5 3300026121 Ga0207683_10023804 Ga0207683_100238043 654
6 3300021320 Ga0214544_1009947 Ga0214544_10099477 656
7 3300028800 Ga0265338_10016491 Ga0265338_100164912 661
8 3300005338 Ga0068868_100007227 Ga0068868_1000072275 665
9 3300005841 Ga0068863_100047218 Ga0068863_1000472185 665
10 3300014968 Ga0157379_10035855 Ga0157379_100358552 665
11 3300005548 Ga0070665_100040391 Ga0070665_1000403914 666
12 3300046501 Ga0495607_0000903 Ga0495607_0000903_2808_4874 669
13 3300046665 Ga0495661_0004981 Ga0495661_0004981_2575_4641 669
14 3300047445 Ga0495677_0006719 Ga0495677_0006719_2079_4145 669
15 3300005444 Ga0070694_100002425 Ga0070694_1000024253 670
16 3300005549 Ga0070704_100008008 Ga0070704_1000080082 670
17 iso_pu_bacteria 2874620515 2874628433 670
18 iso_pu_bacteria 2517572143 2517890599 673
19 iso_pu_bacteria 2528768022 2528857555 673
20 iso_pu_bacteria 3005474847 3005482194 673
21 iso_pu_bacteria 3005587118 3005589727 673
22 3300046694 Ga0495649_0001887 Ga0495649_0001887_2577_4613 674
23 3300047445 Ga0495677_0000382 Ga0495677_0000382_14367_16403 674
24 3300048091 Ga0495626_0019870 Ga0495626_0019870_942_2978 674
25 3300033442 Ga0315911_1000016 Ga0315911_100001674 675
26 3300046616 Ga0495668_0000389 Ga0495668_0000389_37532_39673 675
27 iso_pu_bacteria 2802429603 2805922850 675
28 3300046471 Ga0495650_0000412 Ga0495650_0000412_10958_13048 676
29 3300046500 Ga0495596_0001994 Ga0495596_0001994_4084_6174 676
30 3300046538 Ga0495609_0005269 Ga0495609_0005269_2321_4408 676
31 3300046524 Ga0495648_0002702 Ga0495648_0002702_11492_13579 677
32 3300005563 Ga0068855_100022707 Ga0068855_1000227074 679
33 3300053108 Ga0500562_000236 Ga0500562_000236_7695_9752 679
34 3300048927 Ga0496124_0002690 Ga0496124_0002690_9602_11791 680
35 3300050512 nmdc:mga0n895_70730_c1 nmdc:mga0n895_70730_c1_108_2240 680
36 iso_pu_bacteria 2547132103 2547374483 680
37 iso_pu_bacteria 2843690924 2843692052 680
38 3300006871 Ga0075434_100070530 Ga0075434_1000705303 681
39 3300031727 Ga0316576_10010933 Ga0316576_100109335 681
40 3300048919 Ga0496116_0000060 Ga0496116_0000060_142760_144892 681
41 3300048925 Ga0496122_0012804 Ga0496122_0012804_3550_5682 681
42 3300048926 Ga0496123_0000761 Ga0496123_0000761_22966_25098 681
43 3300048929 Ga0496126_0000305 Ga0496126_0000305_74503_76635 681
44 3300053156 Ga0500622_0000553 Ga0500622_0000553_9336_11459 681
45 iso_pu_bacteria 2841966195 2841972601 681
46 iso_pu_bacteria 2841983080 2841986049 681
47 3300021327 Ga0214543_1005207 Ga0214543_100520716 683
48 iso_pu_bacteria 2884960567 2884965503 683
49 3300021320 Ga0214544_1001102 Ga0214544_100110216 684
50 3300031250 Ga0265331_10005682 Ga0265331_100056826 684
51 3300031251 Ga0265327_10000028 Ga0265327_10000028240 684
52 3300047472 Ga0495686_0023122 Ga0495686_0023122_1721_3853 684
53 3300049585 Ga0501069_0008945 Ga0501069_0008945_474_2612 684
54 3300021324 Ga0214545_1010661 Ga0214545_10106617 685
55 3300028794 Ga0307515_10043092 Ga0307515_100430926 685
56 3300046518 Ga0495631_0004007 Ga0495631_0004007_818_2956 685
57 3300046524 Ga0495648_0000733 Ga0495648_0000733_21315_23453 685
58 3300047469 Ga0495673_0000492 Ga0495673_0000492_25850_28003 685
59 3300047472 Ga0495686_0000863 Ga0495686_0000863_22026_24164 685
60 3300049459 Ga0495678_000902 Ga0495678_000902_20237_22375 685
61 3300053086 Ga0500578_0000270 Ga0500578_0000270_26312_28450 685
62 3300053118 Ga0500594_0000122 Ga0500594_0000122_6077_8215 685
63 3300053138 Ga0500564_000033 Ga0500564_000033_15908_18061 685
64 iso_pu_bacteria 2582581279 2585149703 685
65 3300046457 Ga0495590_0001470 Ga0495590_0001470_1789_3930 686
66 3300046460 Ga0495638_0000283 Ga0495638_0000283_30857_32998 686
67 3300053108 Ga0500562_000685 Ga0500562_000685_3586_5727 686
68 iso_pu_bacteria 2824746037 2824747435 686
69 3300005844 Ga0068862_100017447 Ga0068862_1000174471 687
70 3300028380 Ga0268265_10045746 Ga0268265_100457461 687
71 3300021324 Ga0214545_1023884 Ga0214545_10238841 688
72 3300021327 Ga0214543_1020529 Ga0214543_10205294 688
73 3300025298 Ga0209050_1000643 Ga0209050_100064318 688
74 3300039437 Ga0436365_1797566 Ga0436365_1797566_2194_4329 688
75 3300048924 Ga0496121_0007835 Ga0496121_0007835_3741_5888 688
76 3300048927 Ga0496124_0003113 Ga0496124_0003113_447_2594 688
77 3300053077 Ga0495601_0006595 Ga0495601_0006595_1750_3945 688
78 3300021320 Ga0214544_1010449 Ga0214544_10104493 689
79 3300021321 Ga0214542_1017218 Ga0214542_10172183 689
80 3300021324 Ga0214545_1018042 Ga0214545_10180423 689
81 3300021327 Ga0214543_1018645 Ga0214543_10186456 689
82 3300025299 Ga0209256_1009009 Ga0209256_10090092 689
83 3300027296 Ga0209389_1000194 Ga0209389_100019427 689
84 3300027361 Ga0209489_110800 Ga0209489_11080010 689
85 3300027361 Ga0209489_110829 Ga0209489_11082910 689
86 3300027363 Ga0209700_100552 Ga0209700_10055252 689
87 iso_pu_bacteria 2791355048 2792460866 689
88 iso_pu_bacteria 2824600985 2824601253 689
89 iso_pu_bacteria 2843744320 2843745474 689
90 iso_pu_bacteria 2879083081 2879089076 689
91 iso_pu_bacteria 2906643746 2906646050 689
92 3300025940 Ga0207691_10032704 Ga0207691_100327044 690
93 3300049581 Ga0501047_0002332 Ga0501047_0002332_6613_8709 690
94 3300005338 Ga0068868_100000077 Ga0068868_10000007760 691
95 3300005339 Ga0070660_100001334 Ga0070660_1000013349 691
96 3300005354 Ga0070675_100018567 Ga0070675_1000185674 691
97 3300005366 Ga0070659_100000021 Ga0070659_100000021103 691
98 3300005435 Ga0070714_100016430 Ga0070714_1000164303 691
99 3300013306 Ga0163162_10013507 Ga0163162_100135078 691
100 3300025919 Ga0207657_10000228 Ga0207657_1000022856 691
101 3300025932 Ga0207690_10000030 Ga0207690_10000030106 691
102 3300026023 Ga0207677_10000027 Ga0207677_10000027101 691
103 3300028379 Ga0268266_10000058 Ga0268266_10000058101 691
104 iso_pu_bacteria 2513237092 2513627163 691
105 iso_pu_bacteria 2849560528 2849561087 691
106 iso_pu_bacteria 2849573788 2849578552 691
107 iso_pu_bacteria 2851153111 2851157123 691
108 iso_pu_bacteria 2885374607 2885378352 691
109 iso_pu_bacteria 2898329390 2898332780 691
110 iso_pu_bacteria 3005483717 3005486085 691
111 3300021320 Ga0214544_1013152 Ga0214544_10131529 692
112 3300048909 Ga0496106_0004551 Ga0496106_0004551_6493_8664 692
113 3300048910 Ga0496107_0000034 Ga0496107_0000034_1070_3241 692
114 3300048924 Ga0496121_0000607 Ga0496121_0000607_58979_61150 692
115 iso_pu_bacteria 2643221598 2644001880 692
116 iso_pu_bacteria 2643221614 2644085269 692
117 iso_pu_bacteria 2643221661 2644342821 692
118 iso_pu_bacteria 2643221666 2644366121 692
119 iso_pu_bacteria 2824679649 2824679661 692
120 iso_pu_bacteria 2838122688 2838130422 692
121 iso_pu_bacteria 2885427238 2885427250 692
122 3300021321 Ga0214542_1009214 Ga0214542_100921413 693
123 3300027357 Ga0209589_1000441 Ga0209589_100044143 693
124 3300027361 Ga0209489_100721 Ga0209489_10072127 693
125 3300046453 Ga0495627_000260 Ga0495627_000260_21538_23661 693
126 3300046471 Ga0495650_0000347 Ga0495650_0000347_35926_38049 693
127 3300046512 Ga0495610_0003754 Ga0495610_0003754_181_2304 693
128 3300046515 Ga0495620_0030916 Ga0495620_0030916_214_2337 693
129 3300046519 Ga0495632_0000370 Ga0495632_0000370_10705_12828 693
130 3300046660 Ga0495625_0003121 Ga0495625_0003121_294_2465 693
131 3300047469 Ga0495673_0000614 Ga0495673_0000614_12787_14946 693
132 3300047470 Ga0495681_0000049 Ga0495681_0000049_36164_38287 693
133 iso_pu_bacteria 2617270735 2617348642 693
134 iso_pu_bacteria 2824600985 2824601313 693
135 iso_pu_bacteria 2824609381 2824614133 693
136 iso_pu_bacteria 2824617872 2824619712 693
137 iso_pu_bacteria 2824626560 2824629148 693
138 iso_pu_bacteria 2824635225 2824635814 693
139 iso_pu_bacteria 2824644064 2824644799 693
140 iso_pu_bacteria 2824653114 2824655379 693
141 iso_pu_bacteria 2824661429 2824662693 693
142 iso_pu_bacteria 2824671348 2824671442 693
143 iso_pu_bacteria 2824671348 2824672686 693
144 iso_pu_bacteria 2824687955 2824688080 693
145 iso_pu_bacteria 2824687955 2824689276 693
146 iso_pu_bacteria 2824696289 2824696811 693
147 iso_pu_bacteria 2824696289 2824698018 693
148 iso_pu_bacteria 2824704595 2824704699 693
149 iso_pu_bacteria 2824704595 2824704984 693
150 iso_pu_bacteria 2824714736 2824714984 693
151 iso_pu_bacteria 2824723954 2824724484 693
152 iso_pu_bacteria 2824732956 2824733001 693
153 iso_pu_bacteria 2824746037 2824748535 693
154 iso_pu_bacteria 2824753945 2824754013 693
155 iso_pu_bacteria 2824753945 2824754697 693
156 iso_pu_bacteria 2824763712 2824764448 693
157 iso_pu_bacteria 2824763712 2824765574 693
158 iso_pu_bacteria 2838122688 2838130418 693
159 iso_pu_bacteria 2841941048 2841949221 693
160 iso_pu_bacteria 2841957949 2841961352 693
161 iso_pu_bacteria 2841974524 2841977074 693
162 iso_pu_bacteria 2847930680 2847933351 693
163 iso_pu_bacteria 2874612657 2874613563 693
164 iso_pu_bacteria 2874612657 2874616946 693
165 iso_pu_bacteria 2904711408 2904713903 693
166 iso_pu_bacteria 2904711408 2904714254 693
167 iso_pu_bacteria 3005587118 3005589700 693
168 iso_pu_bacteria 8054302542 8054306505 693
169 3300005333 Ga0070677_10000422 Ga0070677_1000042213 694
170 3300006941 Ga0099825_1020619 Ga0099825_10206193 694
171 3300021321 Ga0214542_1015424 Ga0214542_10154242 694
172 3300021327 Ga0214543_1012323 Ga0214543_10123239 694
173 3300025893 Ga0207682_10000777 Ga0207682_100007772 694
174 3300027296 Ga0209389_1000194 Ga0209389_100019416 694
175 3300027363 Ga0209700_100552 Ga0209700_10055240 694
176 iso_pu_bacteria 2508501128 2509153776 694
177 iso_pu_bacteria 2513237102 2513706715 694
178 iso_pu_bacteria 2513237104 2513716577 694
179 iso_pu_bacteria 2513237139 2513878774 694
180 iso_pu_bacteria 2517093001 2517107312 694
181 iso_pu_bacteria 2617270735 2617354337 694
182 iso_pu_bacteria 2617270741 2617379552 694
183 iso_pu_bacteria 2643221699 2644548973 694
184 iso_pu_bacteria 2824600985 2824601169 694
185 iso_pu_bacteria 2879083081 2879089061 694
186 iso_pu_bacteria 2881364244 2881369876 694
187 iso_pu_bacteria 2888378607 2888380866 694
188 iso_pu_bacteria 2906643746 2906646041 694
189 iso_pu_bacteria 2906660503 2906661869 694
190 iso_pu_bacteria 8056681323 8056686469 694
191 3300025933 Ga0207706_10022093 Ga0207706_100220935 695
192 3300037418 Ga0395900_0074382 Ga0395900_0074382_875_3016 695
193 3300048910 Ga0496107_0034056 Ga0496107_0034056_1048_3195 695
194 iso_pu_bacteria 2513237096 2513659897 695
195 iso_pu_bacteria 2513237145 2513921852 695
196 iso_pu_bacteria 2818991438 2819551981 695
197 iso_pu_bacteria 2903748898 2903758483 695
198 iso_pu_bacteria 2904690495 2904693866 695
199 iso_pu_bacteria 2908739725 2908739873 695
200 iso_pu_bacteria 2908756301 2908758445 695
201 3300005548 Ga0070665_100000287 Ga0070665_10000028768 696
202 3300005937 Ga0081455_10001158 Ga0081455_100011587 696
203 3300025913 Ga0207695_10000215 Ga0207695_1000021599 696
204 3300028379 Ga0268266_10000819 Ga0268266_1000081923 696
205 3300031995 Ga0307409_100026642 Ga0307409_1000266422 696
206 3300009098 Ga0105245_10020622 Ga0105245_100206221 697
207 3300048905 Ga0496102_0047675 Ga0496102_0047675_875_2968 697
208 3300049569 Ga0501032_0000562 Ga0501032_0000562_22025_24196 697
209 3300049572 Ga0501036_0008224 Ga0501036_0008224_850_3021 697
210 3300049583 Ga0501067_0000242 Ga0501067_0000242_18133_20304 697
211 3300049589 Ga0501073_0000002 Ga0501073_0000002_66289_68460 697
212 3300049593 Ga0501077_0000010 Ga0501077_0000010_28505_30676 697
213 3300049742 Ga0501080_0015147 Ga0501080_0015147_2455_4626 697
214 3300049823 Ga0501044_0002439 Ga0501044_0002439_16383_18554 697
215 iso_pu_bacteria 2824609381 2824609523 697
216 iso_pu_bacteria 2824653114 2824653727 697
217 iso_pu_bacteria 2908775508 2908777690 697
218 3300047472 Ga0495686_0000132 Ga0495686_0000132_17278_19386 698
219 3300053139 Ga0500568_0004353 Ga0500568_0004353_3131_5281 698
220 3300053151 Ga0500604_0000048 Ga0500604_0000048_27137_29287 698
221 3300053153 Ga0500616_0000435 Ga0500616_0000435_47641_49788 698
222 3300005339 Ga0070660_100060534 Ga0070660_1000605342 704
223 3300025315 Ga0207697_10006571 Ga0207697_100065714 706
224 3300025904 Ga0207647_10047255 Ga0207647_100472552 706
225 3300025925 Ga0207650_10041605 Ga0207650_100416052 706
226 3300025926 Ga0207659_10049674 Ga0207659_100496741 706
227 3300002077 JGI24744J21845_10001922 JGI24744J21845_100019224 707
228 3300005353 Ga0070669_100086729 Ga0070669_1000867291 707
229 3300005356 Ga0070674_100002328 Ga0070674_1000023282 707
230 3300025893 Ga0207682_10015494 Ga0207682_100154942 707
231 3300025907 Ga0207645_10027783 Ga0207645_100277832 707
232 3300026067 Ga0207678_10018082 Ga0207678_100180825 707
233 3300026089 Ga0207648_10006350 Ga0207648_100063505 707

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00326

Peptidase_S9

Prolyl oligopeptidase family

550

755

0.92

PF02897

Peptidase_S9_N

Prolyl oligopeptidase, N-terminal beta-propeller domain

74

488

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
4hvt-assembly1.cif.gz_A structure of a post-proline cleaving enzyme from rickettsia typhi 0.9604 30 702
4hvt-assembly1.cif.gz_A structure of a post-proline cleaving enzyme from rickettsia typhi 0.9345 30 702
2bkl-assembly1.cif.gz_A structural and mechanistic analysis of two prolyl endopeptidases: role of inter-domain dynamics in catalysis and specificity 0.906 28 703
3iuq-assembly1.cif.gz_A appep_d622n+pp closed state 0.8945 28 706
7y1x-assembly1.cif.gz_A crystal structure of prolyl oligopeptidase from microbulbifer arenaceous complex with peg400 and mes 0.8804 28 703
ID Description Score Start End Superfamily
af_O07178_411_672_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9845 438 701 3.40.50.1820
4hvtA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.978 437 702 3.40.50.1820
af_O07178_411_672_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9771 438 701 3.40.50.1820
af_O07178_69_406_2.130.10.120 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;Prolyl oligopeptidase, N-terminal domain 0.9535 88 432 2.130.10.120
af_Q4D6H1_442_707_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9479 442 701 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A354EWB3-F1-model_v4 S9 family peptidase 0.9896 492 696 GO:0004252
GO:0005829
GO:0006508
GO:0070012
AF-A0A560HRF2-F1-model_v4 Prolyl oligopeptidase 0.9867 27 704 GO:0004252
GO:0005829
GO:0006508
GO:0070012
AF-A0A212DTU7-F1-model_v4 deleted 0.985 432 590
AF-A0A354EWB3-F1-model_v4 S9 family peptidase 0.9848 492 696 GO:0004252
GO:0005829
GO:0006508
GO:0070012
AF-V4N769-F1-model_v4 Peptidase 0.9847 28 704 GO:0004252
GO:0005829
GO:0006508
GO:0070012

Feature Viewer

pLDDT pTM Quality
92.68 0.91 High
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Predicted Structure (AlphaFold2)

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