F346087

General Info

Members Datasets Scaffolds Average Seq Length
233 143 231 550

Family's Representative Sequence

Representative Sequence 3300013104|Ga0157370_10006403|Ga0157370_1000640312
Length 587
Sequence LWIENRIVDVITQILSPIAACMTGAHVSPLAGKPLPAAELISVADLIHAYHSHVVDPSQPGQRIHFGTSGHRGSAFSNSFNEPQIVAIAEAICLYRKHHRIDGPLFLGIDTHALSGPAFVTALEVFVANDVVTMIDARGGYTPTPVISHAILAYNRGRTQGLADGVVITPSHNPPEDGGFKYNPPTGGPADSAVTSWIEAHANRLLESGTRDVRRIPYERARRSPCVRRHDYLDHYTKDLASVIDMEAIRQSGVSLGIDPLGGASVGYWPEIIGHYGLKGTVVEDTVDPTFAFMPADWDGKIRMDCSSPYAMTRLIGLRDRFDVAIGNDTDADRHGVVTPTSGLMEPNHYLAAAISYLFDHRPDWSAQPGIGKTMVTSAMINRLAARLGRRLIEVPVGFKWFVDGLFTGALGFAGEESAGASLLRRDGSVWTTDKDGLALGLLAAEMKARSQRDPGEIYAELTREFGQSWYERIDAPATAQQMNLLRQVSADAVRATDLAGEPIQSRLTAAPGNGAAFGGIKISAASGWFAARPSGTEALYKIYAESFRGADHLREIQNDAQAIVGALFGEAAAGDDKSAAELIDHQ

Samples

Sample ID Description Type Environment
1 2524614857 Deinococcus ficus DSM 19119 Isolate Rhizosphere
2 2739367875 Deinococcus ficus CC-FR2-10 Isolate Unclassified
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
30 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
37 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
41 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
42 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
56 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
57 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
64 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
65 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
86 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
88 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
89 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
90 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
91 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
92 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
93 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
94 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
95 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
96 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
97 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
98 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
99 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
100 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
101 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
102 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
103 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
104 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
105 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
106 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
107 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
108 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
109 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
110 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
111 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
112 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
113 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
114 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
115 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
116 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
117 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
118 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
119 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
120 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
121 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
122 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
123 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
124 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
125 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
126 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
127 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
128 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
129 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
130 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
131 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
132 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
133 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
134 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
136 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
137 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
138 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
139 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
140 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
141 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
142 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
143 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.14
Metatranscriptomes 0
Isolates 0.86

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.86
Nodule 0
Rhizoplane 2.15
Rhizosphere 89.7
Stem 0
Stem Tuber 0
Unclassified 7.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10025123 3300001979 Bacteria 2012
2 Ga0070658_10014306 3300005327 Bacteria 6367
3 Ga0070658_10022205 3300005327 Bacteria 5092
4 Ga0070658_10023453 3300005327 Bacteria 4952
5 Ga0070680_100007072 3300005336 Bacteria 8555
6 Ga0070680_100009051 3300005336 Bacteria 7636
7 Ga0068868_100006869 3300005338 Bacteria 8082
8 Ga0068868_100014892 3300005338 Bacteria 5741
9 Ga0070660_100028336 3300005339 Bacteria 4189
10 Ga0070660_100049504 3300005339 Bacteria 3231
11 Ga0070691_10000215 3300005341 Bacteria 19539
12 Ga0070661_100003137 3300005344 Bacteria 11367
13 Ga0070668_100000539 3300005347 Bacteria 25247
14 Ga0070659_100041807 3300005366 Bacteria 3584
15 Ga0070700_100010791 3300005441 Bacteria 5050
16 Ga0070663_100075211 3300005455 Bacteria 2468
17 Ga0070662_100024756 3300005457 Bacteria 4139
18 Ga0070699_100105681 3300005518 Bacteria 2470
19 Ga0070679_100047540 3300005530 Bacteria 4276
20 Ga0070697_100002278 3300005536 Bacteria 14728
21 Ga0070697_100079951 3300005536 Bacteria 2692
22 Ga0068853_100017868 3300005539 Bacteria 5859
23 Ga0068853_100021293 3300005539 Bacteria 5404
24 Ga0068853_100021800 3300005539 Bacteria 5344
25 Ga0070695_100052215 3300005545 Bacteria 2626
26 Ga0070696_100005598 3300005546 Bacteria 8386
27 Ga0070696_100012249 3300005546 Bacteria 5747
28 Ga0070693_100017995 3300005547 Bacteria 3684
29 Ga0070665_100046105 3300005548 Bacteria 4378
30 Ga0070665_100104409 3300005548 Bacteria 2836
31 Ga0070704_100018976 3300005549 Bacteria 4411
32 Ga0068855_100002783 3300005563 Bacteria 21522
33 Ga0068855_100003715 3300005563 Bacteria 18659
34 Ga0068855_100043552 3300005563 Bacteria 5316
35 Ga0068855_100043919 3300005563 Bacteria 5291
36 Ga0068855_100083795 3300005563 Bacteria 3693
37 Ga0070664_100022386 3300005564 Bacteria 5210
38 Ga0068857_100022732 3300005577 Bacteria 5516
39 Ga0068857_100025864 3300005577 Bacteria 5169
40 Ga0068854_100003454 3300005578 Bacteria 9861
41 Ga0068854_100006738 3300005578 Bacteria 7320
42 Ga0068854_100019211 3300005578 Bacteria 4601
43 Ga0068856_100003268 3300005614 Bacteria 16480
44 Ga0068856_100079303 3300005614 Bacteria 3256
45 Ga0070702_100003559 3300005615 Bacteria 6986
46 Ga0068851_10000250 3300005834 Bacteria 25377
47 Ga0068858_100097678 3300005842 Bacteria 2738
48 Ga0068862_100001001 3300005844 Bacteria 27048
49 Ga0081538_10001734 3300005981 Bacteria 22156
50 Ga0081539_10002287 3300005985 Bacteria 27748
51 Ga0070717_10002277 3300006028 Bacteria 13456
52 Ga0070716_100010275 3300006173 Bacteria 4689
53 Ga0070712_100001739 3300006175 Bacteria 13329
54 Ga0097621_100005767 3300006237 Bacteria 8741
55 Ga0075428_100018866 3300006844 Bacteria 7628
56 Ga0075428_100101447 3300006844 Bacteria 3137
57 Ga0075430_100033192 3300006846 Bacteria 4381
58 Ga0075431_100057729 3300006847 Bacteria 4003
59 Ga0075433_10010670 3300006852 Bacteria 7388
60 Ga0075434_100000958 3300006871 Bacteria 23248
61 Ga0075434_100098340 3300006871 Bacteria 2932
62 Ga0075434_100104544 3300006871 Bacteria 2841
63 Ga0075434_100114577 3300006871 Bacteria 2709
64 Ga0075436_100042719 3300006914 Bacteria 3126
65 Ga0075435_100000242 3300007076 Bacteria 33676
66 Ga0105240_10000482 3300009093 Bacteria 73610
67 Ga0105240_10024708 3300009093 Bacteria 7914
68 Ga0105240_10036589 3300009093 Bacteria 6312
69 Ga0111539_10035843 3300009094 Bacteria 6005
70 Ga0105245_10165263 3300009098 Bacteria 2103
71 Ga0114129_10015306 3300009147 Bacteria 10914
72 Ga0105241_10003734 3300009174 Bacteria 11304
73 Ga0105237_10039639 3300009545 Bacteria 4755
74 Ga0105237_10102028 3300009545 Bacteria 2861
75 Ga0105238_10004636 3300009551 Bacteria 13606
76 Ga0105238_10008990 3300009551 Bacteria 9996
77 Ga0105238_10013753 3300009551 Bacteria 8179
78 Ga0105238_10024501 3300009551 Bacteria 6150
79 Ga0105238_10057353 3300009551 Bacteria 3905
80 Ga0105249_10023960 3300009553 Bacteria 5482
81 Ga0105239_10003896 3300010375 Bacteria 18087
82 Ga0105239_10004824 3300010375 Bacteria 15973
83 Ga0105239_10027825 3300010375 Bacteria 6220
84 Ga0105239_10092225 3300010375 Bacteria 3343
85 Ga0157373_10018356 3300013100 Bacteria 5095
86 Ga0157371_10005254 3300013102 Bacteria 10988
87 Ga0157371_10023870 3300013102 Bacteria 4469
88 Ga0157370_10005389 3300013104 Bacteria 14353
89 Ga0157370_10006403 3300013104 Bacteria 12985
90 Ga0157370_10011743 3300013104 Bacteria 9146
91 Ga0157370_10021028 3300013104 Bacteria 6506
92 Ga0157369_10001350 3300013105 Bacteria 30302
93 Ga0157369_10003718 3300013105 Bacteria 18137
94 Ga0157369_10004053 3300013105 Bacteria 17357
95 Ga0157369_10027272 3300013105 Bacteria 6334
96 Ga0157369_10028611 3300013105 Bacteria 6167
97 Ga0157369_10036236 3300013105 Bacteria 5405
98 Ga0157374_10131318 3300013296 Bacteria 2424
99 Ga0163162_10215116 3300013306 Bacteria 2052
100 Ga0157372_10034610 3300013307 Bacteria 5554
101 Ga0157372_10303526 3300013307 Bacteria 1857
102 Ga0163163_10000314 3300014325 Bacteria 47556
103 Ga0163163_10006616 3300014325 Bacteria 10150
104 Ga0157379_10003644 3300014968 Bacteria 13075
105 Ga0213875_10000599 3300021388 Bacteria 29170
106 Ga0207647_10009460 3300025904 Bacteria 6924
107 Ga0207654_10000724 3300025911 Bacteria 18409
108 Ga0207707_10004342 3300025912 Bacteria 12548
109 Ga0207707_10057524 3300025912 Bacteria 3384
110 Ga0207707_10086682 3300025912 Bacteria 2736
111 Ga0207695_10002936 3300025913 Bacteria 24601
112 Ga0207695_10050265 3300025913 Bacteria 4387
113 Ga0207695_10158770 3300025913 Bacteria 2194
114 Ga0207693_10023109 3300025915 Bacteria 4938
115 Ga0207660_10034534 3300025917 Bacteria 3506
116 Ga0207657_10000722 3300025919 Bacteria 35100
117 Ga0207657_10002689 3300025919 Bacteria 19160
118 Ga0207657_10003415 3300025919 Bacteria 16949
119 Ga0207657_10032545 3300025919 Bacteria 4709
120 Ga0207649_10020698 3300025920 Bacteria 3775
121 Ga0207652_10000617 3300025921 Bacteria 35399
122 Ga0207652_10009174 3300025921 Bacteria 7963
123 Ga0207694_10000119 3300025924 Bacteria 83771
124 Ga0207694_10028233 3300025924 Bacteria 4278
125 Ga0207694_10030286 3300025924 Bacteria 4132
126 Ga0207694_10040873 3300025924 Bacteria 3573
127 Ga0207690_10013566 3300025932 Bacteria 4898
128 Ga0207706_10002452 3300025933 Bacteria 18108
129 Ga0207706_10014429 3300025933 Bacteria 7161
130 Ga0207706_10062549 3300025933 Bacteria 3278
131 Ga0207665_10002486 3300025939 Bacteria 12416
132 Ga0207667_10001766 3300025949 Bacteria 27221
133 Ga0207667_10014326 3300025949 Bacteria 9044
134 Ga0207667_10080539 3300025949 Bacteria 3374
135 Ga0207667_10092044 3300025949 Bacteria 3132
136 Ga0207668_10003408 3300025972 Bacteria 9321
137 Ga0207640_10021929 3300025981 Bacteria 3815
138 Ga0207639_10001969 3300026041 Bacteria 13812
139 Ga0207639_10012833 3300026041 Bacteria 5845
140 Ga0207708_10023484 3300026075 Bacteria 4662
141 Ga0207702_10000002 3300026078 Bacteria 491507
142 Ga0207702_10000359 3300026078 Bacteria 52081
143 Ga0207702_10000859 3300026078 Bacteria 31767
144 Ga0207702_10058409 3300026078 Bacteria 3283
145 Ga0207674_10009154 3300026116 Bacteria 11357
146 Ga0207674_10010285 3300026116 Bacteria 10614
147 Ga0207674_10016456 3300026116 Bacteria 8094
148 Ga0207674_10036290 3300026116 Bacteria 5138
149 Ga0207428_10035028 3300027907 Bacteria 4107
150 Ga0268265_10000744 3300028380 Bacteria 31783
151 Ga0265318_10002762 3300028577 Bacteria 9194
152 Ga0265323_10000793 3300028653 Bacteria 16923
153 Ga0307515_10064980 3300028794 Bacteria 5090
154 Ga0307512_10075260 3300030522 Bacteria 2471
155 Ga0265314_10007684 3300031711 Bacteria 9322
156 Ga0316576_10005931 3300031727 Bacteria 7541
157 Ga0316576_10025511 3300031727 Bacteria 4139
158 Ga0316576_10067196 3300031727 Bacteria 2639
159 Ga0316577_10003410 3300031733 Bacteria 8023
160 Ga0316577_10005518 3300031733 Bacteria 6638
161 Ga0316577_10032137 3300031733 Bacteria 2932
162 Ga0307409_100012720 3300031995 Bacteria 5377
163 Ga0307416_100066536 3300032002 Bacteria 2967
164 Ga0373934_0004124 3300035086 Bacteria 5356
165 Ga0373955_0013003 3300035172 Bacteria 4013
166 Ga0316574_0001396 3300035398 Bacteria 11420
167 Ga0373937_0008456 3300036401 Bacteria 8945
168 Ga0316582_0101199 3300036647 Bacteria 1909
169 Ga0316584_0016370 3300036712 Bacteria 5315
170 Ga0316584_0064985 3300036712 Bacteria 2733
171 Ga0395899_0000137 3300037312 Bacteria 111924
172 Ga0395900_0000108 3300037418 Bacteria 147706
173 Ga0395898_0000632 3300037466 Bacteria 64373
174 Ga0395905_0000780 3300037471 Bacteria 41824
175 Ga0395905_0007637 3300037471 Bacteria 10732
176 Ga0395905_0044414 3300037471 Bacteria 4171
177 Ga0436364_0013221 3300037853 Bacteria 2354
178 Ga0436364_0064702 3300037853 Bacteria 4390
179 Ga0436364_0119124 3300037853 Bacteria 5441
180 Ga0436364_0125665 3300037853 Bacteria 8268
181 Ga0436364_0193354 3300037853 Bacteria 9927
182 Ga0436364_0431728 3300037853 Bacteria 222864
183 Ga0436364_0900214 3300037853 Bacteria 3068
184 Ga0436364_1460489 3300037853 Bacteria 6723
185 Ga0395901_0000050 3300038443 Bacteria 171046
186 Ga0400483_196640 3300039062 Bacteria 4693
187 Ga0436363_0065648 3300039450 Bacteria 2194
188 Ga0439460_0010405 3300042461 Bacteria 2379
189 Ga0451577_0029096 3300042876 Bacteria 4995
190 Ga0451577_0055697 3300042876 Bacteria 3527
191 Ga0453683_0002408 3300044673 Bacteria 14568
192 Ga0453684_0002451 3300044712 Bacteria 45023
193 Ga0453684_0003195 3300044712 Bacteria 37549
194 Ga0453684_0036695 3300044712 Bacteria 6749
195 Ga0451576_0002390 3300045051 Bacteria 28217
196 Ga0495629_0008064 3300046459 Bacteria 7754
197 Ga0495651_0008502 3300046462 Bacteria 7865
198 Ga0495580_0066470 3300046472 Bacteria 2524
199 Ga0495628_0028130 3300046516 Bacteria 4571
200 Ga0495587_0009449 3300046536 Bacteria 6250
201 Ga0495645_0013980 3300046543 Bacteria 5688
202 Ga0495645_0102637 3300046543 Bacteria 2032
203 Ga0495622_0023301 3300046557 Bacteria 2885
204 Ga0495667_0011342 3300046559 Bacteria 6035
205 Ga0495613_0002326 3300046689 Bacteria 14386
206 Ga0495613_0021196 3300046689 Bacteria 4847
207 Ga0495604_0034629 3300047317 Bacteria 3994
208 Ga0495684_0012110 3300047471 Bacteria 6655
209 Ga0496101_0121101 3300048904 Bacteria 1978
210 Ga0496102_0093859 3300048905 Bacteria 2780
211 Ga0496108_0037290 3300048911 Bacteria 4048
212 Ga0496111_0036413 3300048914 Bacteria 3518
213 Ga0496112_0016010 3300048915 Bacteria 7012
214 Ga0496117_0003980 3300048920 Bacteria 16691
215 Ga0496118_0000953 3300048921 Bacteria 45266
216 Ga0496126_0000314 3300048929 Bacteria 102938
217 Ga0501038_0002294 3300049574 Bacteria 17786
218 Ga0501257_001920 3300049686 Bacteria 4326
219 Ga0501080_0043453 3300049742 Bacteria 4184
220 Ga0501080_0084405 3300049742 Bacteria 2951
221 nmdc:mga05p37_13166_c1 3300050507 Bacteria 9901
222 nmdc:mga05p37_63574_c2 3300050507 Bacteria 4019
223 nmdc:mga05p37_71470_c1 3300050507 Bacteria 4269
224 nmdc:mga05p37_9100_c1 3300050507 Bacteria 11737
225 nmdc:mga0qj67_57397_c1 3300050509 Bacteria 3086
226 nmdc:mga06r32_219522_c1 3300050510 Bacteria 1889
227 nmdc:mga06r32_47487_c1 3300050510 Bacteria 4101
228 nmdc:mga0rr50_3591_c1 3300050513 Bacteria 8967
229 nmdc:mga08x19_36164_c1 3300050514 Bacteria 3127
230 Ga0500614_007173 3300053123 Bacteria 2346
231 Ga0500637_0026246 3300053178 Bacteria 3209

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300039450 Ga0436363_0065648 Ga0436363_0065648_59_1474 465
2 3300046557 Ga0495622_0023301 Ga0495622_0023301_113_1735 504
3 3300053178 Ga0500637_0026246 Ga0500637_0026246_583_2205 504
4 3300013105 Ga0157369_10001350 Ga0157369_1000135014 512
5 3300042461 Ga0439460_0010405 Ga0439460_0010405_532_2136 514
6 3300053123 Ga0500614_007173 Ga0500614_007173_606_2282 521
7 3300005347 Ga0070668_100000539 Ga0070668_10000053913 522
8 3300005844 Ga0068862_100001001 Ga0068862_10000100121 522
9 3300025972 Ga0207668_10003408 Ga0207668_100034082 522
10 3300028380 Ga0268265_10000744 Ga0268265_100007449 522
11 3300025912 Ga0207707_10086682 Ga0207707_100866822 525
12 3300005327 Ga0070658_10023453 Ga0070658_100234535 526
13 3300005563 Ga0068855_100043919 Ga0068855_1000439192 526
14 3300013105 Ga0157369_10027272 Ga0157369_100272722 526
15 3300028653 Ga0265323_10000793 Ga0265323_100007937 531
16 3300006028 Ga0070717_10002277 Ga0070717_100022779 533
17 3300046543 Ga0495645_0102637 Ga0495645_0102637_288_1889 533
18 3300005985 Ga0081539_10002287 Ga0081539_1000228728 534
19 3300005338 Ga0068868_100014892 Ga0068868_1000148923 535
20 3300005441 Ga0070700_100010791 Ga0070700_1000107913 535
21 3300005615 Ga0070702_100003559 Ga0070702_1000035594 535
22 3300009098 Ga0105245_10165263 Ga0105245_101652632 535
23 3300010375 Ga0105239_10092225 Ga0105239_100922252 535
24 3300013306 Ga0163162_10215116 Ga0163162_102151161 535
25 3300026075 Ga0207708_10023484 Ga0207708_100234843 535
26 3300046462 Ga0495651_0008502 Ga0495651_0008502_669_2318 538
27 3300046516 Ga0495628_0028130 Ga0495628_0028130_1256_2905 538
28 3300046536 Ga0495587_0009449 Ga0495587_0009449_3553_5202 538
29 3300046543 Ga0495645_0013980 Ga0495645_0013980_1167_2816 538
30 3300047317 Ga0495604_0034629 Ga0495604_0034629_1999_3648 538
31 3300047471 Ga0495684_0012110 Ga0495684_0012110_1872_3521 538
32 3300031733 Ga0316577_10003410 Ga0316577_100034102 539
33 3300036401 Ga0373937_0008456 Ga0373937_0008456_4276_5919 539
34 3300036712 Ga0316584_0064985 Ga0316584_0064985_98_1750 539
35 3300046559 Ga0495667_0011342 Ga0495667_0011342_2317_3960 539
36 3300006871 Ga0075434_100114577 Ga0075434_1001145772 540
37 3300050510 nmdc:mga06r32_219522_c1 nmdc:mga06r32_219522_c1_199_1821 540
38 iso_pu_bacteria 2524614857 2526062128 540
39 iso_pu_bacteria 2739367875 2740063477 540
40 3300009545 Ga0105237_10102028 Ga0105237_101020282 541
41 3300009551 Ga0105238_10008990 Ga0105238_100089902 541
42 3300025924 Ga0207694_10028233 Ga0207694_100282332 541
43 3300035086 Ga0373934_0004124 Ga0373934_0004124_2551_4200 541
44 3300035172 Ga0373955_0013003 Ga0373955_0013003_2206_3855 541
45 3300005546 Ga0070696_100005598 Ga0070696_1000055986 542
46 3300009094 Ga0111539_10035843 Ga0111539_100358436 542
47 3300031727 Ga0316576_10025511 Ga0316576_100255113 542
48 3300035398 Ga0316574_0001396 Ga0316574_0001396_4976_6622 542
49 3300036647 Ga0316582_0101199 Ga0316582_0101199_215_1873 545
50 3300005338 Ga0068868_100006869 Ga0068868_1000068692 546
51 3300005341 Ga0070691_10000215 Ga0070691_100002151 546
52 3300005545 Ga0070695_100052215 Ga0070695_1000522152 546
53 3300005547 Ga0070693_100017995 Ga0070693_1000179952 546
54 3300006237 Ga0097621_100005767 Ga0097621_1000057672 546
55 3300006914 Ga0075436_100042719 Ga0075436_1000427192 546
56 3300009093 Ga0105240_10000482 Ga0105240_1000048270 546
57 3300009551 Ga0105238_10057353 Ga0105238_100573532 546
58 3300010375 Ga0105239_10004824 Ga0105239_1000482413 546
59 3300013104 Ga0157370_10011743 Ga0157370_1001174312 546
60 3300013105 Ga0157369_10028611 Ga0157369_100286118 546
61 3300013296 Ga0157374_10131318 Ga0157374_101313181 546
62 3300013307 Ga0157372_10303526 Ga0157372_103035262 546
63 3300014968 Ga0157379_10003644 Ga0157379_100036446 546
64 3300025913 Ga0207695_10050265 Ga0207695_100502653 546
65 3300025924 Ga0207694_10040873 Ga0207694_100408733 546
66 3300026078 Ga0207702_10000359 Ga0207702_100003598 546
67 3300037853 Ga0436364_0193354 Ga0436364_0193354_5815_7482 546
68 3300042876 Ga0451577_0029096 Ga0451577_0029096_3102_4742 546
69 3300044673 Ga0453683_0002408 Ga0453683_0002408_11265_12905 546
70 3300044712 Ga0453684_0036695 Ga0453684_0036695_1383_3023 546
71 3300045051 Ga0451576_0002390 Ga0451576_0002390_24914_26554 546
72 3300046459 Ga0495629_0008064 Ga0495629_0008064_5188_6828 546
73 3300046689 Ga0495613_0021196 Ga0495613_0021196_398_2038 546
74 3300048929 Ga0496126_0000314 Ga0496126_0000314_28143_29783 546
75 3300049574 Ga0501038_0002294 Ga0501038_0002294_10606_12246 546
76 3300049742 Ga0501080_0043453 Ga0501080_0043453_646_2286 546
77 3300050514 nmdc:mga08x19_36164_c1 nmdc:mga08x19_36164_c1_1380_3023 546
78 3300005548 Ga0070665_100104409 Ga0070665_1001044092 547
79 3300006173 Ga0070716_100010275 Ga0070716_1000102754 547
80 3300006175 Ga0070712_100001739 Ga0070712_1000017397 547
81 3300025915 Ga0207693_10023109 Ga0207693_100231092 547
82 3300025939 Ga0207665_10002486 Ga0207665_100024865 547
83 3300025949 Ga0207667_10080539 Ga0207667_100805393 547
84 3300028794 Ga0307515_10064980 Ga0307515_100649803 547
85 3300030522 Ga0307512_10075260 Ga0307512_100752602 547
86 3300037312 Ga0395899_0000137 Ga0395899_0000137_102415_104061 547
87 3300037418 Ga0395900_0000108 Ga0395900_0000108_112033_113679 547
88 3300037466 Ga0395898_0000632 Ga0395898_0000632_7864_9510 547
89 3300037471 Ga0395905_0000780 Ga0395905_0000780_6528_8174 547
90 3300038443 Ga0395901_0000050 Ga0395901_0000050_132890_134536 547
91 3300005536 Ga0070697_100079951 Ga0070697_1000799512 548
92 3300006844 Ga0075428_100018866 Ga0075428_1000188663 548
93 3300014325 Ga0163163_10000314 Ga0163163_1000031421 548
94 3300014325 Ga0163163_10006616 Ga0163163_100066162 548
95 3300031727 Ga0316576_10067196 Ga0316576_100671962 548
96 3300037471 Ga0395905_0044414 Ga0395905_0044414_1943_3643 548
97 3300039062 Ga0400483_196640 Ga0400483_196640_2887_4536 548
98 3300048904 Ga0496101_0121101 Ga0496101_0121101_144_1790 548
99 3300048905 Ga0496102_0093859 Ga0496102_0093859_1105_2751 548
100 3300048914 Ga0496111_0036413 Ga0496111_0036413_1822_3468 548
101 3300048915 Ga0496112_0016010 Ga0496112_0016010_3140_4786 548
102 3300048920 Ga0496117_0003980 Ga0496117_0003980_12965_14611 548
103 3300048921 Ga0496118_0000953 Ga0496118_0000953_15007_16653 548
104 3300005327 Ga0070658_10022205 Ga0070658_100222055 549
105 3300005336 Ga0070680_100009051 Ga0070680_1000090511 549
106 3300005339 Ga0070660_100028336 Ga0070660_1000283362 549
107 3300005344 Ga0070661_100003137 Ga0070661_1000031374 549
108 3300005366 Ga0070659_100041807 Ga0070659_1000418074 549
109 3300005457 Ga0070662_100024756 Ga0070662_1000247565 549
110 3300005530 Ga0070679_100047540 Ga0070679_1000475401 549
111 3300005539 Ga0068853_100021800 Ga0068853_1000218005 549
112 3300005546 Ga0070696_100012249 Ga0070696_1000122495 549
113 3300005548 Ga0070665_100046105 Ga0070665_1000461052 549
114 3300005563 Ga0068855_100002783 Ga0068855_10000278314 549
115 3300005563 Ga0068855_100003715 Ga0068855_1000037157 549
116 3300005563 Ga0068855_100083795 Ga0068855_1000837952 549
117 3300005564 Ga0070664_100022386 Ga0070664_1000223865 549
118 3300005577 Ga0068857_100025864 Ga0068857_1000258644 549
119 3300005578 Ga0068854_100006738 Ga0068854_1000067383 549
120 3300005614 Ga0068856_100003268 Ga0068856_1000032687 549
121 3300005614 Ga0068856_100079303 Ga0068856_1000793032 549
122 3300005842 Ga0068858_100097678 Ga0068858_1000976782 549
123 3300005981 Ga0081538_10001734 Ga0081538_100017347 549
124 3300006844 Ga0075428_100101447 Ga0075428_1001014472 549
125 3300006846 Ga0075430_100033192 Ga0075430_1000331922 549
126 3300006847 Ga0075431_100057729 Ga0075431_1000577292 549
127 3300006852 Ga0075433_10010670 Ga0075433_100106702 549
128 3300006871 Ga0075434_100000958 Ga0075434_10000095819 549
129 3300006871 Ga0075434_100104544 Ga0075434_1001045442 549
130 3300007076 Ga0075435_100000242 Ga0075435_10000024211 549
131 3300009147 Ga0114129_10015306 Ga0114129_100153064 549
132 3300009553 Ga0105249_10023960 Ga0105249_100239602 549
133 3300010375 Ga0105239_10027825 Ga0105239_100278256 549
134 3300013100 Ga0157373_10018356 Ga0157373_100183566 549
135 3300013102 Ga0157371_10023870 Ga0157371_100238706 549
136 3300013104 Ga0157370_10006403 Ga0157370_1000640312 549
137 3300013104 Ga0157370_10021028 Ga0157370_100210286 549
138 3300013105 Ga0157369_10003718 Ga0157369_100037189 549
139 3300013307 Ga0157372_10034610 Ga0157372_100346106 549
140 3300021388 Ga0213875_10000599 Ga0213875_1000059922 549
141 3300025912 Ga0207707_10004342 Ga0207707_100043422 549
142 3300025912 Ga0207707_10057524 Ga0207707_100575244 549
143 3300025913 Ga0207695_10158770 Ga0207695_101587703 549
144 3300025917 Ga0207660_10034534 Ga0207660_100345344 549
145 3300025919 Ga0207657_10002689 Ga0207657_100026894 549
146 3300025919 Ga0207657_10032545 Ga0207657_100325453 549
147 3300025920 Ga0207649_10020698 Ga0207649_100206981 549
148 3300025921 Ga0207652_10009174 Ga0207652_100091745 549
149 3300025932 Ga0207690_10013566 Ga0207690_100135666 549
150 3300025933 Ga0207706_10002452 Ga0207706_100024524 549
151 3300025933 Ga0207706_10062549 Ga0207706_100625492 549
152 3300025949 Ga0207667_10001766 Ga0207667_1000176613 549
153 3300025981 Ga0207640_10021929 Ga0207640_100219293 549
154 3300026041 Ga0207639_10001969 Ga0207639_1000196910 549
155 3300026041 Ga0207639_10012833 Ga0207639_100128333 549
156 3300026078 Ga0207702_10058409 Ga0207702_100584093 549
157 3300026116 Ga0207674_10010285 Ga0207674_100102852 549
158 3300026116 Ga0207674_10036290 Ga0207674_100362905 549
159 3300027907 Ga0207428_10035028 Ga0207428_100350282 549
160 3300028577 Ga0265318_10002762 Ga0265318_100027627 549
161 3300031711 Ga0265314_10007684 Ga0265314_100076846 549
162 3300031727 Ga0316576_10005931 Ga0316576_100059315 549
163 3300031733 Ga0316577_10005518 Ga0316577_100055188 549
164 3300031733 Ga0316577_10032137 Ga0316577_100321372 549
165 3300036712 Ga0316584_0016370 Ga0316584_0016370_2507_4159 549
166 3300037853 Ga0436364_0064702 Ga0436364_0064702_220_1884 549
167 3300037853 Ga0436364_0119124 Ga0436364_0119124_603_2267 549
168 3300037853 Ga0436364_0125665 Ga0436364_0125665_1431_3095 549
169 3300037853 Ga0436364_0431728 Ga0436364_0431728_61227_62888 549
170 3300037853 Ga0436364_0900214 Ga0436364_0900214_571_2235 549
171 3300037853 Ga0436364_1460489 Ga0436364_1460489_1691_3355 549
172 3300042876 Ga0451577_0055697 Ga0451577_0055697_1036_2688 549
173 3300044712 Ga0453684_0002451 Ga0453684_0002451_30186_31838 549
174 3300044712 Ga0453684_0003195 Ga0453684_0003195_22147_23802 549
175 3300046472 Ga0495580_0066470 Ga0495580_0066470_21_1694 549
176 3300049742 Ga0501080_0084405 Ga0501080_0084405_667_2334 549
177 3300050507 nmdc:mga05p37_63574_c2 nmdc:mga05p37_63574_c2_302_1951 549
178 3300050507 nmdc:mga05p37_71470_c1 nmdc:mga05p37_71470_c1_1562_3238 549
179 3300050507 nmdc:mga05p37_9100_c1 nmdc:mga05p37_9100_c1_8567_10240 549
180 3300050509 nmdc:mga0qj67_57397_c1 nmdc:mga0qj67_57397_c1_716_2389 549
181 3300050510 nmdc:mga06r32_47487_c1 nmdc:mga06r32_47487_c1_1062_2735 549
182 3300050513 nmdc:mga0rr50_3591_c1 nmdc:mga0rr50_3591_c1_5369_7018 549
183 3300005536 Ga0070697_100002278 Ga0070697_10000227814 550
184 3300005549 Ga0070704_100018976 Ga0070704_1000189762 550
185 3300006871 Ga0075434_100098340 Ga0075434_1000983402 550
186 3300031995 Ga0307409_100012720 Ga0307409_1000127203 550
187 3300032002 Ga0307416_100066536 Ga0307416_1000665362 550
188 3300037853 Ga0436364_0013221 Ga0436364_0013221_82_1749 550
189 3300001979 JGI24740J21852_10025123 JGI24740J21852_100251231 551
190 3300005327 Ga0070658_10014306 Ga0070658_100143062 551
191 3300005336 Ga0070680_100007072 Ga0070680_1000070726 551
192 3300005339 Ga0070660_100049504 Ga0070660_1000495042 551
193 3300005455 Ga0070663_100075211 Ga0070663_1000752112 551
194 3300005518 Ga0070699_100105681 Ga0070699_1001056812 551
195 3300005539 Ga0068853_100017868 Ga0068853_1000178683 551
196 3300005539 Ga0068853_100021293 Ga0068853_1000212933 551
197 3300005563 Ga0068855_100043552 Ga0068855_1000435523 551
198 3300005577 Ga0068857_100022732 Ga0068857_1000227323 551
199 3300005578 Ga0068854_100003454 Ga0068854_1000034542 551
200 3300005578 Ga0068854_100019211 Ga0068854_1000192113 551
201 3300005834 Ga0068851_10000250 Ga0068851_100002502 551
202 3300009093 Ga0105240_10024708 Ga0105240_100247087 551
203 3300009093 Ga0105240_10036589 Ga0105240_100365895 551
204 3300009174 Ga0105241_10003734 Ga0105241_1000373410 551
205 3300009545 Ga0105237_10039639 Ga0105237_100396393 551
206 3300009551 Ga0105238_10004636 Ga0105238_100046364 551
207 3300009551 Ga0105238_10013753 Ga0105238_100137532 551
208 3300009551 Ga0105238_10024501 Ga0105238_100245014 551
209 3300010375 Ga0105239_10003896 Ga0105239_1000389615 551
210 3300013102 Ga0157371_10005254 Ga0157371_100052545 551
211 3300013104 Ga0157370_10005389 Ga0157370_100053895 551
212 3300013105 Ga0157369_10004053 Ga0157369_1000405310 551
213 3300013105 Ga0157369_10036236 Ga0157369_100362364 551
214 3300025904 Ga0207647_10009460 Ga0207647_100094605 551
215 3300025911 Ga0207654_10000724 Ga0207654_1000072412 551
216 3300025913 Ga0207695_10002936 Ga0207695_1000293622 551
217 3300025919 Ga0207657_10000722 Ga0207657_100007228 551
218 3300025919 Ga0207657_10003415 Ga0207657_100034152 551
219 3300025921 Ga0207652_10000617 Ga0207652_1000061724 551
220 3300025924 Ga0207694_10000119 Ga0207694_1000011912 551
221 3300025924 Ga0207694_10030286 Ga0207694_100302863 551
222 3300025933 Ga0207706_10014429 Ga0207706_100144297 551
223 3300025949 Ga0207667_10014326 Ga0207667_100143267 551
224 3300025949 Ga0207667_10092044 Ga0207667_100920442 551
225 3300026078 Ga0207702_10000002 Ga0207702_1000000212 551
226 3300026078 Ga0207702_10000859 Ga0207702_1000085917 551
227 3300026116 Ga0207674_10009154 Ga0207674_1000915410 551
228 3300026116 Ga0207674_10016456 Ga0207674_100164563 551
229 3300037471 Ga0395905_0007637 Ga0395905_0007637_4494_6158 551
230 3300046689 Ga0495613_0002326 Ga0495613_0002326_2054_3727 551
231 3300048911 Ga0496108_0037290 Ga0496108_0037290_801_2513 551
232 3300049686 Ga0501257_001920 Ga0501257_001920_2461_4137 551
233 3300050507 nmdc:mga05p37_13166_c1 nmdc:mga05p37_13166_c1_5904_7583 551

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02880

PGM_PMM_III

Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III

346

466

0.96

PF02878

PGM_PMM_I

Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I

63

208

0.95

PF02879

PGM_PMM_II

Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II

232

342

0.9

PF00408

PGM_PMM_IV

Phosphoglucomutase/phosphomannomutase, C-terminal domain

475

563

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
2z0f-assembly1.cif.gz_A crystal structure of putative phosphoglucomutase from thermus thermophilus hb8 0.98 19 546
2z0f-assembly1.cif.gz_B crystal structure of putative phosphoglucomutase from thermus thermophilus hb8 0.9744 19 546
2z0f-assembly1.cif.gz_A crystal structure of putative phosphoglucomutase from thermus thermophilus hb8 0.9741 19 546
2z0f-assembly1.cif.gz_B crystal structure of putative phosphoglucomutase from thermus thermophilus hb8 0.9686 19 546
2fuv-assembly1.cif.gz_B phosphoglucomutase from salmonella typhimurium. 0.9659 5 548
ID Description Score Start End Superfamily
3na5B03 Alpha Beta;3-Layer(aba) Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3;Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.991 322 446 3.40.120.10
3na5B03 Alpha Beta;3-Layer(aba) Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3;Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.9832 322 446 3.40.120.10
3na5B02 Alpha Beta;3-Layer(aba) Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3;Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.9804 227 319 3.40.120.10
2fuvB04 Alpha Beta;2-Layer Sandwich;TATA-Binding Protein;Alpha-D-phosphohexomutase, C-terminal domain 0.9747 448 548 3.30.310.50
2z0fB01 Alpha Beta;3-Layer(aba) Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3;Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.9689 19 219 3.40.120.10
ID Description Score Start End GO Terms
AF-A0A6G3VGS7-F1-model_v4 deleted 1.003 335 410
AF-A0A6B3GP49-F1-model_v4 Phosphoglucomutase, alpha-D-glucose phosphate-specific (EC 5.4.2.2) 1.002 82 196 GO:0000287
GO:0004614
GO:0005829
GO:0005975
AF-A0A354BP52-F1-model_v4 Phosphoglucomutase, alpha-D-glucose phosphate-specific (EC 5.4.2.2) 0.9979 16 185 GO:0000287
GO:0004614
GO:0005829
GO:0005975
AF-A0A2A4SED8-F1-model_v4 Phosphoglucomutase, alpha-D-glucose phosphate-specific 0.9974 104 267 GO:0000287
GO:0005975
GO:0006166
GO:0008973
AF-A0A401WTR9-F1-model_v4 Phosphoglucomutase (EC 5.4.2.2) 0.9969 54 549 GO:0000287
GO:0004614
GO:0005975
GO:0006166
GO:0008973

Feature Viewer

pLDDT pTM Quality
94.81 0.94 High
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Predicted Structure (AlphaFold2)

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