F346063

General Info

Members Datasets Scaffolds Average Seq Length
233 147 466 231

Family's Representative Sequence

Representative Sequence 3300009545|Ga0105237_10125032|Ga0105237_101250323
Length 261
Sequence MRLGLAIVGMGKMGRMCEALAPEYGFEVRARFAAANNFDGAGLTTEALRGVDVAVEFSEPGAAVSNIRALAAAGVSAAVGTTGWGEELEAAREAVTRAGTGLVWAANFSVGVNLFLRIAGCAAELFAKQAEYEAWGWEMHHSAKKDAPSGTLKKLAEVMRARGYERRIDLSSSRAGAVPGTHEIGFDALGDTITLRHTARSREGFARGALQAARWVVGKRGFFEFGEIVGELGEEEVDSRKLKVESEEILGNVGAVADRVG

Samples

Sample ID Description Type Environment
1 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
39 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
40 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
61 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
85 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
86 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
88 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
89 3300030879 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
90 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
91 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
92 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
93 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
94 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
95 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
96 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
97 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
98 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
99 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
100 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
101 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
102 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
103 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
104 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
105 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
106 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
107 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
108 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
109 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
110 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
111 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
112 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
113 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
114 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
115 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
116 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
117 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
118 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
119 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
120 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
121 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
122 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
123 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
124 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
125 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
126 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
127 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
128 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
129 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
130 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
131 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
132 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
134 3300049677 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control Metagenome Rhizosphere
135 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
136 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
137 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
138 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
139 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
140 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
141 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
142 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
143 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
144 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
145 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
146 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
147 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.42
Metatranscriptomes 2.58
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.43
Nodule 0
Rhizoplane 3
Rhizosphere 93.56
Stem 0
Stem Tuber 0
Unclassified 15.02

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105237_10125032 3300009545 Bacteria 2566
2 JGI25406J46586_10014615 3300003203 Bacteria 3333
3 Ga0070683_100284814 3300005329 Bacteria 1572
4 Ga0070670_100388609 3300005331 Bacteria 1230
5 Ga0070680_100082222 3300005336 Bacteria 2658
6 Ga0070682_100581413 3300005337 Unclassified 881
7 Ga0070660_100082709 3300005339 Bacteria 2521
8 Ga0070689_100022392 3300005340 Bacteria 4718
9 Ga0070689_100206078 3300005340 Bacteria 1608
10 Ga0070687_100125770 3300005343 Bacteria 1473
11 Ga0070675_100660720 3300005354 Unclassified 950
12 Ga0070709_10002867 3300005434 Bacteria 9310
13 Ga0070709_10036080 3300005434 Bacteria 3009
14 Ga0070709_10038806 3300005434 Bacteria 2919
15 Ga0070714_100000133 3300005435 Bacteria 58489
16 Ga0070714_100323293 3300005435 Bacteria 1443
17 Ga0070713_100045527 3300005436 Bacteria 3596
18 Ga0070713_100273638 3300005436 Bacteria 1547
19 Ga0070711_100022521 3300005439 Bacteria 4085
20 Ga0070711_100042384 3300005439 Bacteria 3076
21 Ga0070711_100091497 3300005439 Bacteria 2193
22 Ga0070711_100698549 3300005439 Unclassified 854
23 Ga0070705_100011031 3300005440 Bacteria 4545
24 Ga0070694_100053391 3300005444 Bacteria 2735
25 Ga0070708_100016142 3300005445 Bacteria 6189
26 Ga0070708_100024901 3300005445 Bacteria 5114
27 Ga0070708_100033360 3300005445 Unclassified 4473
28 Ga0070708_100067622 3300005445 Unclassified 3209
29 Ga0070708_100086017 3300005445 Bacteria 2855
30 Ga0070708_100324652 3300005445 Bacteria 1450
31 Ga0070681_10167715 3300005458 Bacteria 2118
32 Ga0070706_100132191 3300005467 Bacteria 2329
33 Ga0070707_100000142 3300005468 Bacteria 67685
34 Ga0070707_100030135 3300005468 Bacteria 5163
35 Ga0070707_100049689 3300005468 Bacteria 4020
36 Ga0070707_100270792 3300005468 Bacteria 1651
37 Ga0070707_100499375 3300005468 Unclassified 1178
38 Ga0070698_100006687 3300005471 Bacteria 12504
39 Ga0070698_100182439 3300005471 Bacteria 2037
40 Ga0070699_100004669 3300005518 Bacteria 12113
41 Ga0070699_100737594 3300005518 Unclassified 901
42 Ga0070679_100012430 3300005530 Bacteria 8134
43 Ga0070684_100067020 3300005535 Unclassified 3152
44 Ga0070697_100000357 3300005536 Bacteria 35807
45 Ga0070697_100004635 3300005536 Bacteria 10551
46 Ga0070697_100181716 3300005536 Bacteria 1783
47 Ga0070697_100209449 3300005536 Bacteria 1659
48 Ga0070695_100002488 3300005545 Bacteria 10604
49 Ga0070695_100052837 3300005545 Bacteria 2612
50 Ga0070693_100000039 3300005547 Bacteria 49769
51 Ga0068855_100039240 3300005563 Bacteria 5621
52 Ga0068857_100015115 3300005577 Bacteria 6737
53 Ga0068857_100194064 3300005577 Bacteria 1850
54 Ga0068854_100464001 3300005578 Unclassified 1060
55 Ga0068859_100008027 3300005617 Bacteria 10703
56 Ga0068859_100368426 3300005617 Bacteria 1532
57 Ga0068859_100581337 3300005617 Bacteria 1214
58 Ga0068864_100062960 3300005618 Unclassified 3214
59 Ga0068863_100038466 3300005841 Bacteria 4551
60 Ga0081455_10006437 3300005937 Bacteria 12587
61 Ga0081455_10266275 3300005937 Bacteria 1246
62 Ga0081540_1055623 3300005983 Bacteria 1926
63 Ga0081539_10000844 3300005985 Bacteria 58650
64 Ga0081539_10067419 3300005985 Bacteria 1935
65 Ga0070717_10074144 3300006028 Bacteria 2844
66 Ga0070717_10079626 3300006028 Bacteria 2748
67 Ga0070715_10054330 3300006163 Bacteria 1734
68 Ga0070716_100001514 3300006173 Bacteria 10391
69 Ga0070716_100020749 3300006173 Bacteria 3453
70 Ga0070716_100181661 3300006173 Bacteria 1382
71 Ga0070716_100762261 3300006173 Unclassified 746
72 Ga0070712_100004324 3300006175 Bacteria 8750
73 Ga0070712_100030644 3300006175 Bacteria 3618
74 Ga0070712_100043919 3300006175 Bacteria 3079
75 Ga0070712_100165387 3300006175 Bacteria 1712
76 Ga0075428_100236038 3300006844 Bacteria 1973
77 Ga0075431_100255242 3300006847 Bacteria 1780
78 Ga0068865_100074793 3300006881 Bacteria 2414
79 Ga0075436_100412042 3300006914 Unclassified 980
80 Ga0097620_100008027 3300006931 Bacteria 10703
81 Ga0097620_100368396 3300006931 Bacteria 1532
82 Ga0097620_100581378 3300006931 Bacteria 1214
83 Ga0099794_10013976 3300007265 Bacteria 3507
84 Ga0099794_10033371 3300007265 Bacteria 2420
85 Ga0099794_10083790 3300007265 Bacteria 1576
86 Ga0111539_10094599 3300009094 Bacteria 3511
87 Ga0111539_11143693 3300009094 Bacteria 904
88 Ga0114129_10020792 3300009147 Bacteria 9326
89 Ga0114129_10139332 3300009147 Bacteria 3327
90 Ga0114129_10716343 3300009147 Bacteria 1284
91 Ga0105241_10189316 3300009174 Bacteria 1712
92 Ga0105242_10123996 3300009176 Unclassified 2221
93 Ga0105248_10068884 3300009177 Bacteria 3973
94 Ga0105248_10610729 3300009177 Bacteria 1230
95 Ga0105237_10015204 3300009545 Bacteria 8017
96 Ga0105249_10411671 3300009553 Bacteria 1384
97 Ga0105239_10146880 3300010375 Bacteria 2631
98 Ga0105246_10068738 3300011119 Bacteria 2485
99 Ga0157374_10064607 3300013296 Bacteria 3435
100 Ga0157372_10081975 3300013307 Bacteria 3651
101 Ga0157372_10293132 3300013307 Bacteria 1892
102 Ga0157375_10224215 3300013308 Bacteria 2039
103 Ga0163163_10050586 3300014325 Bacteria 4092
104 Ga0163163_10150908 3300014325 Unclassified 2367
105 Ga0163163_10676741 3300014325 Unclassified 1095
106 Ga0157380_10109996 3300014326 Bacteria 2313
107 Ga0157380_10150948 3300014326 Bacteria 2009
108 Ga0213876_10009734 3300021384 Bacteria 5173
109 Ga0207699_10002140 3300025906 Bacteria 9344
110 Ga0207699_10033067 3300025906 Bacteria 2920
111 Ga0207705_10049519 3300025909 Bacteria 3023
112 Ga0207707_10137900 3300025912 Bacteria 2133
113 Ga0207707_10287101 3300025912 Bacteria 1424
114 Ga0207671_10000030 3300025914 Bacteria 248197
115 Ga0207693_10056296 3300025915 Bacteria 3083
116 Ga0207693_10120425 3300025915 Unclassified 2061
117 Ga0207663_10068709 3300025916 Bacteria 2277
118 Ga0207660_10214633 3300025917 Bacteria 1508
119 Ga0207657_10175762 3300025919 Bacteria 1733
120 Ga0207652_10074928 3300025921 Bacteria 2948
121 Ga0207646_10000047 3300025922 Bacteria 172446
122 Ga0207646_10003377 3300025922 Bacteria 18062
123 Ga0207646_10178288 3300025922 Bacteria 1919
124 Ga0207646_10318590 3300025922 Bacteria 1405
125 Ga0207646_10438895 3300025922 Unclassified 1178
126 Ga0207659_10392691 3300025926 Unclassified 1159
127 Ga0207700_10020651 3300025928 Unclassified 4479
128 Ga0207664_10000083 3300025929 Bacteria 94523
129 Ga0207670_10044378 3300025936 Bacteria 2941
130 Ga0207665_10002296 3300025939 Bacteria 12914
131 Ga0207665_10026824 3300025939 Bacteria 3805
132 Ga0207665_10074421 3300025939 Bacteria 2324
133 Ga0207711_10456848 3300025941 Bacteria 1189
134 Ga0207667_10124759 3300025949 Bacteria 2652
135 Ga0207651_10921466 3300025960 Bacteria 779
136 Ga0207640_10322526 3300025981 Unclassified 1230
137 Ga0207702_10118232 3300026078 Bacteria 2368
138 Ga0207674_10057745 3300026116 Bacteria 3934
139 Ga0207674_10414770 3300026116 Bacteria 1301
140 Ga0207675_100498308 3300026118 Unclassified 1212
141 Ga0209588_1013620 3300027671 Bacteria 2482
142 Ga0209588_1020416 3300027671 Bacteria 2075
143 Ga0209588_1063345 3300027671 Bacteria 1195
144 Ga0207428_10001506 3300027907 Bacteria 24366
145 Ga0207428_10188195 3300027907 Unclassified 1557
146 Ga0265354_1000205 3300028016 Bacteria 10898
147 Ga0268265_10269102 3300028380 Bacteria 1519
148 Ga0265338_10380263 3300028800 Bacteria 1010
149 Ga0265770_1000130 3300030878 Bacteria 9179
150 Ga0265770_1003537 3300030878 Bacteria 2124
151 Ga0265765_1000259 3300030879 Bacteria 3828
152 Ga0265760_10000036 3300031090 Bacteria 45130
153 Ga0265760_10015955 3300031090 Bacteria 2154
154 Ga0265760_10063306 3300031090 Unclassified 1127
155 Ga0265320_10135059 3300031240 Bacteria 1120
156 Ga0265327_10000097 3300031251 Bacteria 193156
157 Ga0307408_100010950 3300031548 Bacteria 5985
158 Ga0307408_100027059 3300031548 Bacteria 3949
159 Ga0307405_10610858 3300031731 Unclassified 891
160 Ga0307413_10116744 3300031824 Unclassified 1799
161 Ga0307410_10002454 3300031852 Bacteria 8953
162 Ga0307407_10093996 3300031903 Bacteria 1845
163 Ga0307412_10239217 3300031911 Unclassified 1403
164 Ga0307409_100016017 3300031995 Bacteria 4944
165 Ga0307409_100018926 3300031995 Bacteria 4647
166 Ga0307414_10098474 3300032004 Bacteria 2194
167 Ga0307414_10220427 3300032004 Unclassified 1557
168 Ga0307411_10136060 3300032005 Bacteria 1804
169 Ga0307415_100574063 3300032126 Bacteria 999
170 Ga0373955_0088304 3300035172 Bacteria 1763
171 Ga0373955_0203819 3300035172 Bacteria 1178
172 Ga0373937_0357014 3300036401 Bacteria 1385
173 Ga0436364_0702581 3300037853 Unclassified 3278
174 Ga0436365_0685499 3300039437 Bacteria 5207
175 Ga0436365_1490531 3300039437 Bacteria 4843
176 Ga0436365_1492345 3300039437 Bacteria 1518
177 Ga0436365_1576187 3300039437 Bacteria 906
178 Ga0436365_1654492 3300039437 Bacteria 1510
179 Ga0451577_0229393 3300042876 Bacteria 1679
180 Ga0453684_0091745 3300044712 Bacteria 3748
181 Ga0453684_1108707 3300044712 Bacteria 836
182 Ga0451576_0063045 3300045051 Unclassified 3864
183 Ga0495592_0253196 3300046454 Bacteria 1163
184 Ga0495580_0073094 3300046472 Bacteria 2394
185 Ga0495580_0589441 3300046472 Bacteria 735
186 Ga0495639_0113411 3300046475 Bacteria 1288
187 Ga0495664_0002624 3300046477 Bacteria 9671
188 Ga0495664_0066063 3300046477 Bacteria 2157
189 Ga0495666_0102407 3300046526 Bacteria 1349
190 Ga0495652_0220711 3300046529 Bacteria 1425
191 Ga0495587_0104499 3300046536 Bacteria 1630
192 Ga0495587_0128389 3300046536 Bacteria 1450
193 Ga0495621_0148045 3300046539 Bacteria 922
194 Ga0495645_0008166 3300046543 Bacteria 7298
195 Ga0495645_0036806 3300046543 Bacteria 3567
196 Ga0495668_0064639 3300046616 Bacteria 2014
197 Ga0495668_0346277 3300046616 Unclassified 816
198 Ga0495635_0369606 3300046663 Bacteria 955
199 Ga0495635_0390564 3300046663 Bacteria 925
200 Ga0495599_0164023 3300046678 Unclassified 1373
201 Ga0495581_0034733 3300047315 Bacteria 2917
202 Ga0495604_0129732 3300047317 Bacteria 1814
203 Ga0495604_0246745 3300047317 Bacteria 1219
204 Ga0495675_0004033 3300047444 Bacteria 8902
205 Ga0495677_0061342 3300047445 Bacteria 1394
206 Ga0495602_0159804 3300048088 Bacteria 1761
207 Ga0496106_0173854 3300048909 Bacteria 1708
208 Ga0496108_0462285 3300048911 Unclassified 1109
209 Ga0496109_0000026 3300048912 Bacteria 171405
210 Ga0496109_0302443 3300048912 Unclassified 1508
211 Ga0496112_0129699 3300048915 Bacteria 2492
212 Ga0496112_0268646 3300048915 Bacteria 1654
213 Ga0496113_0074266 3300048916 Bacteria 2592
214 Ga0501041_0421977 3300049577 Bacteria 846
215 Ga0501217_053692 3300049661 Bacteria 1060
216 Ga0501247_008858 3300049677 Bacteria 1181
217 Ga0501249_011946 3300049679 Bacteria 1830
218 Ga0501080_0202377 3300049742 Bacteria 1823
219 nmdc:mga05p37_21616_c3 3300050507 Bacteria 5216
220 nmdc:mga05p37_21965_c1 3300050507 Bacteria 7730
221 nmdc:mga0qj67_574806_c1 3300050509 Bacteria 903
222 nmdc:mga06r32_123076_c1 3300050510 Bacteria 2560
223 nmdc:mga06r32_233987_c1 3300050510 Bacteria 1825
224 nmdc:mga06r32_24402_c1 3300050510 Bacteria 5612
225 nmdc:mga08y16_216630_c1 3300050511 Unclassified 1983
226 nmdc:mga08y16_9190_c1 3300050511 Bacteria 10374
227 nmdc:mga0n895_844721_c1 3300050512 Bacteria 904
228 nmdc:mga0rr50_621912_c1 3300050513 Bacteria 921
229 nmdc:mga08x19_180281_c1 3300050514 Unclassified 1442
230 nmdc:mga0a205_367976_c1 3300050515 Bacteria 1304
231 Ga0495619_0166903 3300053085 Bacteria 1522
232 Ga0500555_030657 3300053103 Bacteria 1525
233 Ga0501082_0299220 3300060353 Bacteria 1401
234 Ga0105237_10125032
235 JGI25406J46586_10014615
236 Ga0070683_100284814
237 Ga0070670_100388609
238 Ga0070680_100082222
239 Ga0070682_100581413
240 Ga0070660_100082709
241 Ga0070689_100022392
242 Ga0070689_100206078
243 Ga0070687_100125770
244 Ga0070675_100660720
245 Ga0070709_10002867
246 Ga0070709_10036080
247 Ga0070709_10038806
248 Ga0070714_100000133
249 Ga0070714_100323293
250 Ga0070713_100045527
251 Ga0070713_100273638
252 Ga0070711_100022521
253 Ga0070711_100042384
254 Ga0070711_100091497
255 Ga0070711_100698549
256 Ga0070705_100011031
257 Ga0070694_100053391
258 Ga0070708_100016142
259 Ga0070708_100024901
260 Ga0070708_100033360
261 Ga0070708_100067622
262 Ga0070708_100086017
263 Ga0070708_100324652
264 Ga0070681_10167715
265 Ga0070706_100132191
266 Ga0070707_100000142
267 Ga0070707_100030135
268 Ga0070707_100049689
269 Ga0070707_100270792
270 Ga0070707_100499375
271 Ga0070698_100006687
272 Ga0070698_100182439
273 Ga0070699_100004669
274 Ga0070699_100737594
275 Ga0070679_100012430
276 Ga0070684_100067020
277 Ga0070697_100000357
278 Ga0070697_100004635
279 Ga0070697_100181716
280 Ga0070697_100209449
281 Ga0070695_100002488
282 Ga0070695_100052837
283 Ga0070693_100000039
284 Ga0068855_100039240
285 Ga0068857_100015115
286 Ga0068857_100194064
287 Ga0068854_100464001
288 Ga0068859_100008027
289 Ga0068859_100368426
290 Ga0068859_100581337
291 Ga0068864_100062960
292 Ga0068863_100038466
293 Ga0081455_10006437
294 Ga0081455_10266275
295 Ga0081540_1055623
296 Ga0081539_10000844
297 Ga0081539_10067419
298 Ga0070717_10074144
299 Ga0070717_10079626
300 Ga0070715_10054330
301 Ga0070716_100001514
302 Ga0070716_100020749
303 Ga0070716_100181661
304 Ga0070716_100762261
305 Ga0070712_100004324
306 Ga0070712_100030644
307 Ga0070712_100043919
308 Ga0070712_100165387
309 Ga0075428_100236038
310 Ga0075431_100255242
311 Ga0068865_100074793
312 Ga0075436_100412042
313 Ga0097620_100008027
314 Ga0097620_100368396
315 Ga0097620_100581378
316 Ga0099794_10013976
317 Ga0099794_10033371
318 Ga0099794_10083790
319 Ga0111539_10094599
320 Ga0111539_11143693
321 Ga0114129_10020792
322 Ga0114129_10139332
323 Ga0114129_10716343
324 Ga0105241_10189316
325 Ga0105242_10123996
326 Ga0105248_10068884
327 Ga0105248_10610729
328 Ga0105237_10015204
329 Ga0105249_10411671
330 Ga0105239_10146880
331 Ga0105246_10068738
332 Ga0157374_10064607
333 Ga0157372_10081975
334 Ga0157372_10293132
335 Ga0157375_10224215
336 Ga0163163_10050586
337 Ga0163163_10150908
338 Ga0163163_10676741
339 Ga0157380_10109996
340 Ga0157380_10150948
341 Ga0213876_10009734
342 Ga0207699_10002140
343 Ga0207699_10033067
344 Ga0207705_10049519
345 Ga0207707_10137900
346 Ga0207707_10287101
347 Ga0207671_10000030
348 Ga0207693_10056296
349 Ga0207693_10120425
350 Ga0207663_10068709
351 Ga0207660_10214633
352 Ga0207657_10175762
353 Ga0207652_10074928
354 Ga0207646_10000047
355 Ga0207646_10003377
356 Ga0207646_10178288
357 Ga0207646_10318590
358 Ga0207646_10438895
359 Ga0207659_10392691
360 Ga0207700_10020651
361 Ga0207664_10000083
362 Ga0207670_10044378
363 Ga0207665_10002296
364 Ga0207665_10026824
365 Ga0207665_10074421
366 Ga0207711_10456848
367 Ga0207667_10124759
368 Ga0207651_10921466
369 Ga0207640_10322526
370 Ga0207702_10118232
371 Ga0207674_10057745
372 Ga0207674_10414770
373 Ga0207675_100498308
374 Ga0209588_1013620
375 Ga0209588_1020416
376 Ga0209588_1063345
377 Ga0207428_10001506
378 Ga0207428_10188195
379 Ga0265354_1000205
380 Ga0268265_10269102
381 Ga0265338_10380263
382 Ga0265770_1000130
383 Ga0265770_1003537
384 Ga0265765_1000259
385 Ga0265760_10000036
386 Ga0265760_10015955
387 Ga0265760_10063306
388 Ga0265320_10135059
389 Ga0265327_10000097
390 Ga0307408_100010950
391 Ga0307408_100027059
392 Ga0307405_10610858
393 Ga0307413_10116744
394 Ga0307410_10002454
395 Ga0307407_10093996
396 Ga0307412_10239217
397 Ga0307409_100016017
398 Ga0307409_100018926
399 Ga0307414_10098474
400 Ga0307414_10220427
401 Ga0307411_10136060
402 Ga0307415_100574063
403 Ga0373955_0088304
404 Ga0373955_0203819
405 Ga0373937_0357014
406 Ga0436364_0702581
407 Ga0436365_0685499
408 Ga0436365_1490531
409 Ga0436365_1492345
410 Ga0436365_1576187
411 Ga0436365_1654492
412 Ga0451577_0229393
413 Ga0453684_0091745
414 Ga0453684_1108707
415 Ga0451576_0063045
416 Ga0495592_0253196
417 Ga0495580_0073094
418 Ga0495580_0589441
419 Ga0495639_0113411
420 Ga0495664_0002624
421 Ga0495664_0066063
422 Ga0495666_0102407
423 Ga0495652_0220711
424 Ga0495587_0104499
425 Ga0495587_0128389
426 Ga0495621_0148045
427 Ga0495645_0008166
428 Ga0495645_0036806
429 Ga0495668_0064639
430 Ga0495668_0346277
431 Ga0495635_0369606
432 Ga0495635_0390564
433 Ga0495599_0164023
434 Ga0495581_0034733
435 Ga0495604_0129732
436 Ga0495604_0246745
437 Ga0495675_0004033
438 Ga0495677_0061342
439 Ga0495602_0159804
440 Ga0496106_0173854
441 Ga0496108_0462285
442 Ga0496109_0000026
443 Ga0496109_0302443
444 Ga0496112_0129699
445 Ga0496112_0268646
446 Ga0496113_0074266
447 Ga0501041_0421977
448 Ga0501217_053692
449 Ga0501247_008858
450 Ga0501249_011946
451 Ga0501080_0202377
452 nmdc:mga05p37_21616_c3
453 nmdc:mga05p37_21965_c1
454 nmdc:mga0qj67_574806_c1
455 nmdc:mga06r32_123076_c1
456 nmdc:mga06r32_233987_c1
457 nmdc:mga06r32_24402_c1
458 nmdc:mga08y16_216630_c1
459 nmdc:mga08y16_9190_c1
460 nmdc:mga0n895_844721_c1
461 nmdc:mga0rr50_621912_c1
462 nmdc:mga08x19_180281_c1
463 nmdc:mga0a205_367976_c1
464 Ga0495619_0166903
465 Ga0500555_030657
466 Ga0501082_0299220

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05173

DapB_C

Dihydrodipicolinate reductase, C-terminus

111

229

0.92

PF01113

DapB_N

Dihydrodipicolinate reductase, N-terminus

3

108

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
5us6-assembly2.cif.gz_H structure of dihydrodipicolinate reductase from vibrio vulnificus bound to nadh and 2,6 pyridine dicarboxylic acid with intact polyhistidine tag 0.8683 2 218
5us6-assembly1.cif.gz_D structure of dihydrodipicolinate reductase from vibrio vulnificus bound to nadh and 2,6 pyridine dicarboxylic acid with intact polyhistidine tag 0.8539 2 218
1c3v-assembly1.cif.gz_A dihydrodipicolinate reductase from mycobacterium tuberculosis complexed with nadph and pdc 0.8481 2 219
5us6-assembly2.cif.gz_H structure of dihydrodipicolinate reductase from vibrio vulnificus bound to nadh and 2,6 pyridine dicarboxylic acid with intact polyhistidine tag 0.8462 2 218
5wol-assembly1.cif.gz_A crystal structure of dihydrodipicolinate reductase dapb from coxiella burnetii 0.833 2 216
ID Description Score Start End Superfamily
af_Q57865_2_266_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8744 34 213 3.40.50.720
3ijpA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8679 32 218 3.40.50.720
af_P77187_106_178_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8646 33 89 3.40.50.720
6bdxA02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.8642 98 187 3.30.360.10
3qy9A02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.8588 97 188 3.30.360.10
ID Description Score Start End GO Terms
AF-A0A382NXK9-F1-model_v4 Dihydrodipicolinate reductase N-terminal domain-containing protein 0.9775 1 93 GO:0008839
GO:0009089
AF-A0A535IKG8-F1-model_v4 Dihydrodipicolinate reductase N-terminal domain-containing protein 0.9738 1 99 GO:0005829
GO:0008839
GO:0009089
GO:0019877
AF-A0A2V9LI93-F1-model_v4 Dihydrodipicolinate reductase N-terminal domain-containing protein 0.9726 1 117 GO:0008839
GO:0009089
GO:0019877
AF-A0A382NXK9-F1-model_v4 Dihydrodipicolinate reductase N-terminal domain-containing protein 0.9673 1 93 GO:0008839
GO:0009089
AF-A0A838U619-F1-model_v4 Dihydrodipicolinate reductase 0.964 101 217 GO:0005829
GO:0008839
GO:0009089
GO:0019877

Map