F345958

General Info

Members Datasets Scaffolds Average Seq Length
233 136 466 407

Family's Representative Sequence

Representative Sequence 3300006173|Ga0070716_100032856|Ga0070716_1000328562
Length 445
Sequence MCKWNAFTIDSMRGLCKYEASPRENIFHLPGSRLRNMNSAAATPLGDDTTLASHNLPLGRVRALLETVDKGMLVADREGLVLATNTRARKFLEEQGKSEKDSLNIFSEMLHADPQEISQRIQKGEHEIELAGTVSGRSFCARVKWIPESDWLVIQFVNEAADKGASAGTQLTVQELLQEREITYRNLLAAYLKLQEVNRQKTVFLASAAHELKTPLAVIKGYYDLLLTGSLGRLTEKQKDILEESKESCERLVRLVSMFLNYSALESGKLVLQLRENDLRDCLDEVARLRVEGFQRKGVKLETQLDPSIPTFRFDYQKVQQVAANLLDNALKHTTAGGSVTLRAKPHFWERRIAAVAPVQERRRFRLPRPNSVEVSVTDSGAGIAPEHHQEIFEDFVRVDRNTSGMGLGLAIAKRLVQAHRGKIWVESEQHRGSTFAFLLPMDQN

Samples

Sample ID Description Type Environment
1 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
29 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
31 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
32 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
33 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
34 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
39 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
44 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
45 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
46 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
60 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
63 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
64 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
65 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
66 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
67 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
68 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
69 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
70 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
71 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
72 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
73 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
74 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
75 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
76 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
77 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
78 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
79 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
80 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
81 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
82 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
83 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
84 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
85 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
86 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
87 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
88 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
89 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
90 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
91 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
92 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
93 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
94 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
95 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
96 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
97 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
98 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
99 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
100 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
101 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
102 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
103 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
104 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
105 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
106 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
107 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
108 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
109 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
110 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
111 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
112 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
113 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
114 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
115 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
116 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
117 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
118 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
119 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
120 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
121 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
122 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
123 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
124 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
125 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
126 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
127 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
128 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
129 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
130 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
131 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
132 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
133 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
134 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
135 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
136 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.85
Metatranscriptomes 2.15
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.43
Rhizosphere 96.14
Stem 0
Stem Tuber 0
Unclassified 12.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070716_100032856 3300006173 Bacteria 2834
2 Ga0065707_10094005 3300005295 Bacteria 3550
3 Ga0070680_100043200 3300005336 Bacteria 3661
4 Ga0070703_10008507 3300005406 Unclassified 2886
5 Ga0070709_10013462 3300005434 Bacteria 4601
6 Ga0070709_10020593 3300005434 Bacteria 3829
7 Ga0070709_10024319 3300005434 Bacteria 3565
8 Ga0070713_100012425 3300005436 Bacteria 6244
9 Ga0070713_100029536 3300005436 Bacteria 4343
10 Ga0070711_100017081 3300005439 Bacteria 4616
11 Ga0070705_100026204 3300005440 Bacteria 3171
12 Ga0070694_100025508 3300005444 Unclassified 3825
13 Ga0070708_100078895 3300005445 Bacteria 2977
14 Ga0070706_100003382 3300005467 Bacteria 15727
15 Ga0070707_100000234 3300005468 Bacteria 55728
16 Ga0070707_100035596 3300005468 Bacteria 4750
17 Ga0070698_100005090 3300005471 Bacteria 14398
18 Ga0070699_100011900 3300005518 Bacteria 7511
19 Ga0070699_100076855 3300005518 Bacteria 2906
20 Ga0070699_100217998 3300005518 Bacteria 1700
21 Ga0070697_100001220 3300005536 Bacteria 19396
22 Ga0070697_100009958 3300005536 Bacteria 7418
23 Ga0070697_100036851 3300005536 Bacteria 3951
24 Ga0068853_100135613 3300005539 Unclassified 2206
25 Ga0070695_100003581 3300005545 Bacteria 9066
26 Ga0070696_100041019 3300005546 Bacteria 3197
27 Ga0070693_100000039 3300005547 Bacteria 49769
28 Ga0070693_100007759 3300005547 Bacteria 5262
29 Ga0070665_100025752 3300005548 Bacteria 5925
30 Ga0070704_100075451 3300005549 Bacteria 2463
31 Ga0068855_100268421 3300005563 Bacteria 1898
32 Ga0068866_10035463 3300005718 Bacteria 2437
33 Ga0068863_100048581 3300005841 Bacteria 4023
34 Ga0068858_100014042 3300005842 Bacteria 7556
35 Ga0068860_100135731 3300005843 Unclassified 2362
36 Ga0068860_100195864 3300005843 Unclassified 1957
37 Ga0070717_10109036 3300006028 Unclassified 2359
38 Ga0070716_100005155 3300006173 Bacteria 6316
39 Ga0070712_100022112 3300006175 Bacteria 4185
40 Ga0070712_100022855 3300006175 Bacteria 4123
41 Ga0070712_100054586 3300006175 Bacteria 2794
42 Ga0097621_100002107 3300006237 Bacteria 13637
43 Ga0097621_100096717 3300006237 Bacteria 2478
44 Ga0068871_100006356 3300006358 Bacteria 8350
45 Ga0068871_100024783 3300006358 Unclassified 4657
46 Ga0075434_100093956 3300006871 Unclassified 3003
47 Ga0075434_100282637 3300006871 Bacteria 1679
48 Ga0075436_100001044 3300006914 Bacteria 18687
49 Ga0075436_100087281 3300006914 Bacteria 2167
50 Ga0075435_100139018 3300007076 Bacteria 2037
51 Ga0099794_10008622 3300007265 Bacteria 4245
52 Ga0099794_10011203 3300007265 Bacteria 3834
53 Ga0099794_10011592 3300007265 Bacteria 3779
54 Ga0099794_10011671 3300007265 Bacteria 3769
55 Ga0099794_10021569 3300007265 Unclassified 2927
56 Ga0099794_10023785 3300007265 Bacteria 2806
57 Ga0099794_10024978 3300007265 Bacteria 2747
58 Ga0099794_10061694 3300007265 Bacteria 1822
59 Ga0105240_10015817 3300009093 Bacteria 10236
60 Ga0105240_10016590 3300009093 Bacteria 9965
61 Ga0105242_10145467 3300009176 Unclassified 2062
62 Ga0105248_10008810 3300009177 Bacteria 11082
63 Ga0099796_10001347 3300010159 Bacteria 4883
64 Ga0157378_10000790 3300013297 Bacteria 29406
65 Ga0157378_10005996 3300013297 Bacteria 10650
66 Ga0157378_10079372 3300013297 Bacteria 2963
67 Ga0163162_10058305 3300013306 Bacteria 3889
68 Ga0157375_10097837 3300013308 Bacteria 3010
69 Ga0157375_10231590 3300013308 Bacteria 2006
70 Ga0157379_10035499 3300014968 Bacteria 4446
71 Ga0157379_10097584 3300014968 Bacteria 2638
72 Ga0157379_10228894 3300014968 Bacteria 1685
73 Ga0157376_10000010 3300014969 Bacteria 311693
74 Ga0157376_10001858 3300014969 Bacteria 14073
75 Ga0224572_1002907 3300024225 Unclassified 2831
76 Ga0228598_1002389 3300024227 Bacteria 4101
77 Ga0207699_10003893 3300025906 Bacteria 7130
78 Ga0207699_10014588 3300025906 Bacteria 4056
79 Ga0207699_10098662 3300025906 Bacteria 1848
80 Ga0207684_10006168 3300025910 Bacteria 10961
81 Ga0207695_10031980 3300025913 Bacteria 5764
82 Ga0207695_10083763 3300025913 Bacteria 3221
83 Ga0207693_10025302 3300025915 Bacteria 4707
84 Ga0207693_10043642 3300025915 Unclassified 3526
85 Ga0207693_10118490 3300025915 Bacteria 2079
86 Ga0207693_10164782 3300025915 Unclassified 1745
87 Ga0207663_10079215 3300025916 Bacteria 2145
88 Ga0207646_10000243 3300025922 Bacteria 74922
89 Ga0207646_10030854 3300025922 Bacteria 4856
90 Ga0207646_10139411 3300025922 Bacteria 2184
91 Ga0207687_10166350 3300025927 Unclassified 1697
92 Ga0207700_10005043 3300025928 Bacteria 7855
93 Ga0207700_10043694 3300025928 Bacteria 3293
94 Ga0207700_10152114 3300025928 Unclassified 1913
95 Ga0207664_10072014 3300025929 Bacteria 2786
96 Ga0207665_10002398 3300025939 Bacteria 12667
97 Ga0207665_10040313 3300025939 Bacteria 3115
98 Ga0207665_10102709 3300025939 Bacteria 1998
99 Ga0207703_10017874 3300026035 Bacteria 5537
100 Ga0209179_1006633 3300027512 Unclassified 1877
101 Ga0209588_1000702 3300027671 Bacteria 8465
102 Ga0209588_1010198 3300027671 Bacteria 2820
103 Ga0265354_1003196 3300028016 Bacteria 1868
104 Ga0268266_10000141 3300028379 Bacteria 138510
105 Ga0268264_10008882 3300028381 Bacteria 8332
106 Ga0268264_10052622 3300028381 Bacteria 3395
107 Ga0265319_1004996 3300028563 Bacteria 6457
108 Ga0265318_10000227 3300028577 Bacteria 48689
109 Ga0265338_10036955 3300028800 Bacteria 4660
110 Ga0265338_10042283 3300028800 Bacteria 4246
111 Ga0265770_1000144 3300030878 Bacteria 8849
112 Ga0265760_10004707 3300031090 Bacteria 3908
113 Ga0265760_10016660 3300031090 Bacteria 2109
114 Ga0265760_10017346 3300031090 Bacteria 2067
115 Ga0265760_10020214 3300031090 Unclassified 1921
116 Ga0265332_10021764 3300031238 Bacteria 2831
117 Ga0265320_10002068 3300031240 Bacteria 14141
118 Ga0265325_10021797 3300031241 Bacteria 3514
119 Ga0265325_10029854 3300031241 Bacteria 2927
120 Ga0265329_10002039 3300031242 Bacteria 9466
121 Ga0265331_10000041 3300031250 Bacteria 191831
122 Ga0265331_10017935 3300031250 Bacteria 3680
123 Ga0265316_10013448 3300031344 Bacteria 7270
124 Ga0265342_10000168 3300031712 Bacteria 71849
125 Ga0373926_0004279 3300035083 Unclassified 4670
126 Ga0373926_0015437 3300035083 Bacteria 2604
127 Ga0373934_0002050 3300035086 Bacteria 7412
128 Ga0373954_0001729 3300035118 Bacteria 8947
129 Ga0373956_0089411 3300035119 Unclassified 1420
130 Ga0373957_0003565 3300035120 Bacteria 4622
131 Ga0373946_0010424 3300035171 Bacteria 3439
132 Ga0373955_0011931 3300035172 Bacteria 4163
133 Ga0373955_0062577 3300035172 Unclassified 2058
134 Ga0373955_0081585 3300035172 Unclassified 1829
135 Ga0373924_0041344 3300035410 Bacteria 1889
136 Ga0373924_0090713 3300035410 Unclassified 1307
137 Ga0373935_0001529 3300035692 Bacteria 12882
138 Ga0373927_0002277 3300035695 Bacteria 14059
139 Ga0373927_0009880 3300035695 Bacteria 6397
140 Ga0373933_0000132 3300035724 Bacteria 47469
141 Ga0373933_0000455 3300035724 Bacteria 25629
142 Ga0373933_0036007 3300035724 Bacteria 2894
143 Ga0373947_0000610 3300035725 Bacteria 21048
144 Ga0373937_0000024 3300036401 Bacteria 125736
145 Ga0373937_0008312 3300036401 Bacteria 9011
146 Ga0373937_0107197 3300036401 Bacteria 2597
147 Ga0373937_0355190 3300036401 Bacteria 1389
148 Ga0373925_0001512 3300037068 Bacteria 19911
149 Ga0373925_0077967 3300037068 Bacteria 2516
150 Ga0436365_1522474 3300039437 Bacteria 5961
151 Ga0451577_0077442 3300042876 Bacteria 2965
152 Ga0451577_0096013 3300042876 Bacteria 2646
153 Ga0453683_0003049 3300044673 Bacteria 12539
154 Ga0453683_0100817 3300044673 Unclassified 1812
155 Ga0453684_0020686 3300044712 Bacteria 9902
156 Ga0451576_0018451 3300045051 Bacteria 7648
157 Ga0451576_0181761 3300045051 Unclassified 2196
158 Ga0495592_0078208 3300046454 Bacteria 2396
159 Ga0495651_0002441 3300046462 Bacteria 14348
160 Ga0495651_0005353 3300046462 Bacteria 9793
161 Ga0495651_0010768 3300046462 Bacteria 7031
162 Ga0495653_0008731 3300046463 Bacteria 8299
163 Ga0495580_0007495 3300046472 Bacteria 8767
164 Ga0495582_0002864 3300046473 Bacteria 9647
165 Ga0495582_0012971 3300046473 Bacteria 4592
166 Ga0495664_0037233 3300046477 Bacteria 2871
167 Ga0495664_0052090 3300046477 Bacteria 2431
168 Ga0495608_0039015 3300046511 Bacteria 3185
169 Ga0495618_0130984 3300046514 Bacteria 1605
170 Ga0495628_0000344 3300046516 Bacteria 42305
171 Ga0495628_0133502 3300046516 Bacteria 1898
172 Ga0495630_0015157 3300046517 Bacteria 5624
173 Ga0495630_0023047 3300046517 Bacteria 4601
174 Ga0495666_0037356 3300046526 Bacteria 2363
175 Ga0495652_0025902 3300046529 Bacteria 5182
176 Ga0495665_0005616 3300046531 Bacteria 6759
177 Ga0495640_0065238 3300046533 Bacteria 2459
178 Ga0495586_0014905 3300046535 Bacteria 4131
179 Ga0495587_0000696 3300046536 Bacteria 22548
180 Ga0495587_0000872 3300046536 Bacteria 19906
181 Ga0495587_0020099 3300046536 Bacteria 4126
182 Ga0495587_0090358 3300046536 Unclassified 1769
183 Ga0495645_0004230 3300046543 Bacteria 9809
184 Ga0495667_0001190 3300046559 Bacteria 16996
185 Ga0495667_0058433 3300046559 Unclassified 2534
186 Ga0495657_0020813 3300046675 Bacteria 4715
187 Ga0495599_0022870 3300046678 Bacteria 3904
188 Ga0495599_0053871 3300046678 Bacteria 2520
189 Ga0495623_0009945 3300046679 Bacteria 6162
190 Ga0495623_0052974 3300046679 Unclassified 2563
191 Ga0495646_0002771 3300046680 Bacteria 10844
192 Ga0495658_0048853 3300046683 Bacteria 2387
193 Ga0495613_0159302 3300046689 Bacteria 1606
194 Ga0495624_0011647 3300046690 Bacteria 6040
195 Ga0495581_0110270 3300047315 Bacteria 1600
196 Ga0495604_0001995 3300047317 Bacteria 16484
197 Ga0495604_0004212 3300047317 Bacteria 11389
198 Ga0495604_0012800 3300047317 Bacteria 6681
199 Ga0495604_0022818 3300047317 Bacteria 4996
200 Ga0495604_0057142 3300047317 Bacteria 3001
201 Ga0495604_0077027 3300047317 Bacteria 2507
202 Ga0495674_0005788 3300047319 Bacteria 11852
203 Ga0495680_0000036 3300047322 Bacteria 103310
204 Ga0495680_0005277 3300047322 Bacteria 12196
205 Ga0495680_0032852 3300047322 Bacteria 4207
206 Ga0495675_0000073 3300047444 Bacteria 69936
207 Ga0495675_0000950 3300047444 Bacteria 17604
208 Ga0495675_0006363 3300047444 Bacteria 7226
209 Ga0495684_0023449 3300047471 Bacteria 4744
210 Ga0495684_0023871 3300047471 Bacteria 4702
211 Ga0495684_0115724 3300047471 Bacteria 2021
212 Ga0495684_0130686 3300047471 Unclassified 1886
213 Ga0495602_0000047 3300048088 Bacteria 117038
214 Ga0495602_0017760 3300048088 Bacteria 7123
215 Ga0495602_0021097 3300048088 Bacteria 6421
216 Ga0495602_0076791 3300048088 Bacteria 2828
217 Ga0495614_0005468 3300048089 Bacteria 5726
218 Ga0495614_0036625 3300048089 Bacteria 2106
219 Ga0496100_0070789 3300048903 Bacteria 2327
220 Ga0496102_0052735 3300048905 Bacteria 3707
221 Ga0496106_0016271 3300048909 Bacteria 5504
222 Ga0496107_0096187 3300048910 Bacteria 2167
223 Ga0496114_0004385 3300048917 Bacteria 10937
224 Ga0496114_0054327 3300048917 Bacteria 3340
225 Ga0496115_0028802 3300048918 Bacteria 4356
226 Ga0496115_0037282 3300048918 Unclassified 3852
227 nmdc:mga0n895_217148_c1 3300050512 Bacteria 1942
228 nmdc:mga0rr50_145644_c1 3300050513 Bacteria 1910
229 nmdc:mga08x19_4341_c1 3300050514 Bacteria 8402
230 nmdc:mga08x19_77288_c1 3300050514 Bacteria 2180
231 nmdc:mga08x19_78614_c1 3300050514 Bacteria 2162
232 Ga0495601_0043892 3300053077 Bacteria 2809
233 Ga0495612_0022770 3300053078 Bacteria 2511
234 Ga0070716_100032856
235 Ga0065707_10094005
236 Ga0070680_100043200
237 Ga0070703_10008507
238 Ga0070709_10013462
239 Ga0070709_10020593
240 Ga0070709_10024319
241 Ga0070713_100012425
242 Ga0070713_100029536
243 Ga0070711_100017081
244 Ga0070705_100026204
245 Ga0070694_100025508
246 Ga0070708_100078895
247 Ga0070706_100003382
248 Ga0070707_100000234
249 Ga0070707_100035596
250 Ga0070698_100005090
251 Ga0070699_100011900
252 Ga0070699_100076855
253 Ga0070699_100217998
254 Ga0070697_100001220
255 Ga0070697_100009958
256 Ga0070697_100036851
257 Ga0068853_100135613
258 Ga0070695_100003581
259 Ga0070696_100041019
260 Ga0070693_100000039
261 Ga0070693_100007759
262 Ga0070665_100025752
263 Ga0070704_100075451
264 Ga0068855_100268421
265 Ga0068866_10035463
266 Ga0068863_100048581
267 Ga0068858_100014042
268 Ga0068860_100135731
269 Ga0068860_100195864
270 Ga0070717_10109036
271 Ga0070716_100005155
272 Ga0070712_100022112
273 Ga0070712_100022855
274 Ga0070712_100054586
275 Ga0097621_100002107
276 Ga0097621_100096717
277 Ga0068871_100006356
278 Ga0068871_100024783
279 Ga0075434_100093956
280 Ga0075434_100282637
281 Ga0075436_100001044
282 Ga0075436_100087281
283 Ga0075435_100139018
284 Ga0099794_10008622
285 Ga0099794_10011203
286 Ga0099794_10011592
287 Ga0099794_10011671
288 Ga0099794_10021569
289 Ga0099794_10023785
290 Ga0099794_10024978
291 Ga0099794_10061694
292 Ga0105240_10015817
293 Ga0105240_10016590
294 Ga0105242_10145467
295 Ga0105248_10008810
296 Ga0099796_10001347
297 Ga0157378_10000790
298 Ga0157378_10005996
299 Ga0157378_10079372
300 Ga0163162_10058305
301 Ga0157375_10097837
302 Ga0157375_10231590
303 Ga0157379_10035499
304 Ga0157379_10097584
305 Ga0157379_10228894
306 Ga0157376_10000010
307 Ga0157376_10001858
308 Ga0224572_1002907
309 Ga0228598_1002389
310 Ga0207699_10003893
311 Ga0207699_10014588
312 Ga0207699_10098662
313 Ga0207684_10006168
314 Ga0207695_10031980
315 Ga0207695_10083763
316 Ga0207693_10025302
317 Ga0207693_10043642
318 Ga0207693_10118490
319 Ga0207693_10164782
320 Ga0207663_10079215
321 Ga0207646_10000243
322 Ga0207646_10030854
323 Ga0207646_10139411
324 Ga0207687_10166350
325 Ga0207700_10005043
326 Ga0207700_10043694
327 Ga0207700_10152114
328 Ga0207664_10072014
329 Ga0207665_10002398
330 Ga0207665_10040313
331 Ga0207665_10102709
332 Ga0207703_10017874
333 Ga0209179_1006633
334 Ga0209588_1000702
335 Ga0209588_1010198
336 Ga0265354_1003196
337 Ga0268266_10000141
338 Ga0268264_10008882
339 Ga0268264_10052622
340 Ga0265319_1004996
341 Ga0265318_10000227
342 Ga0265338_10036955
343 Ga0265338_10042283
344 Ga0265770_1000144
345 Ga0265760_10004707
346 Ga0265760_10016660
347 Ga0265760_10017346
348 Ga0265760_10020214
349 Ga0265332_10021764
350 Ga0265320_10002068
351 Ga0265325_10021797
352 Ga0265325_10029854
353 Ga0265329_10002039
354 Ga0265331_10000041
355 Ga0265331_10017935
356 Ga0265316_10013448
357 Ga0265342_10000168
358 Ga0373926_0004279
359 Ga0373926_0015437
360 Ga0373934_0002050
361 Ga0373954_0001729
362 Ga0373956_0089411
363 Ga0373957_0003565
364 Ga0373946_0010424
365 Ga0373955_0011931
366 Ga0373955_0062577
367 Ga0373955_0081585
368 Ga0373924_0041344
369 Ga0373924_0090713
370 Ga0373935_0001529
371 Ga0373927_0002277
372 Ga0373927_0009880
373 Ga0373933_0000132
374 Ga0373933_0000455
375 Ga0373933_0036007
376 Ga0373947_0000610
377 Ga0373937_0000024
378 Ga0373937_0008312
379 Ga0373937_0107197
380 Ga0373937_0355190
381 Ga0373925_0001512
382 Ga0373925_0077967
383 Ga0436365_1522474
384 Ga0451577_0077442
385 Ga0451577_0096013
386 Ga0453683_0003049
387 Ga0453683_0100817
388 Ga0453684_0020686
389 Ga0451576_0018451
390 Ga0451576_0181761
391 Ga0495592_0078208
392 Ga0495651_0002441
393 Ga0495651_0005353
394 Ga0495651_0010768
395 Ga0495653_0008731
396 Ga0495580_0007495
397 Ga0495582_0002864
398 Ga0495582_0012971
399 Ga0495664_0037233
400 Ga0495664_0052090
401 Ga0495608_0039015
402 Ga0495618_0130984
403 Ga0495628_0000344
404 Ga0495628_0133502
405 Ga0495630_0015157
406 Ga0495630_0023047
407 Ga0495666_0037356
408 Ga0495652_0025902
409 Ga0495665_0005616
410 Ga0495640_0065238
411 Ga0495586_0014905
412 Ga0495587_0000696
413 Ga0495587_0000872
414 Ga0495587_0020099
415 Ga0495587_0090358
416 Ga0495645_0004230
417 Ga0495667_0001190
418 Ga0495667_0058433
419 Ga0495657_0020813
420 Ga0495599_0022870
421 Ga0495599_0053871
422 Ga0495623_0009945
423 Ga0495623_0052974
424 Ga0495646_0002771
425 Ga0495658_0048853
426 Ga0495613_0159302
427 Ga0495624_0011647
428 Ga0495581_0110270
429 Ga0495604_0001995
430 Ga0495604_0004212
431 Ga0495604_0012800
432 Ga0495604_0022818
433 Ga0495604_0057142
434 Ga0495604_0077027
435 Ga0495674_0005788
436 Ga0495680_0000036
437 Ga0495680_0005277
438 Ga0495680_0032852
439 Ga0495675_0000073
440 Ga0495675_0000950
441 Ga0495675_0006363
442 Ga0495684_0023449
443 Ga0495684_0023871
444 Ga0495684_0115724
445 Ga0495684_0130686
446 Ga0495602_0000047
447 Ga0495602_0017760
448 Ga0495602_0021097
449 Ga0495602_0076791
450 Ga0495614_0005468
451 Ga0495614_0036625
452 Ga0496100_0070789
453 Ga0496102_0052735
454 Ga0496106_0016271
455 Ga0496107_0096187
456 Ga0496114_0004385
457 Ga0496114_0054327
458 Ga0496115_0028802
459 Ga0496115_0037282
460 nmdc:mga0n895_217148_c1
461 nmdc:mga0rr50_145644_c1
462 nmdc:mga08x19_4341_c1
463 nmdc:mga08x19_77288_c1
464 nmdc:mga08x19_78614_c1
465 Ga0495601_0043892
466 Ga0495612_0022770

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00512

HisKA

His Kinase A (phospho-acceptor) domain

200

268

0.95

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

314

444

0.81

Map