F345692

General Info

Members Datasets Scaffolds Average Seq Length
233 161 175 234

Family's Representative Sequence

Representative Sequence 3300003316|rootH1_10150250|rootH1_101502503
Length 274
Sequence VWLVDPRTFLNRIAHIEKASVDETIEHRETSATLHAVRGQSVFSMRSLPEGYASIVIGASGGIGSAIAEAIRQDPRAGEIVRLSRSDDGLEVEKEWTVKAHAATLGARTFHLIICATGALTIDGHGPEKAIRQIDHDIMAKQFSTNAIGPAIVLKHFIPLLPRKERSLFVVLSARVGSIGDNRLGGWISYRSAKAALNQIVKTTSIELSRTKPHAILVAIHPGTVATTLTEPFSGGHERQAPDRASRLILQTADGLTSAQNGGFFAYDGSAIAW

Samples

Sample ID Description Type Environment
1 2510461069 Rhizobium sp. PDO1-076 Isolate Rhizosphere
2 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
3 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
4 2558860983 Allorhizobium undicola ATCC 700741 Isolate Rhizoplane
5 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
6 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
7 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
8 2643221558 Rhizobium sp. Root149 Isolate Unclassified
9 2643221607 Rhizobium sp. Root73 Isolate Unclassified
10 2643221637 Rhizobium sp. Root1212 Isolate Unclassified
11 2643221653 Rhizobium sp. Root1240 Isolate Unclassified
12 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
13 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
14 2643221693 Rhizobium sp. Root491 Isolate Unclassified
15 2643221718 Rhizobium sp. Root268 Isolate Unclassified
16 2643221719 Rhizobium sp. Root274 Isolate Unclassified
17 2738541293 Rhizobium sp. GV031 Isolate Unclassified
18 2738541317 Rhizobium halophytocola DSM 21600 Isolate Unclassified
19 2738541333 Rhizobium sophoriradicis CCBAU 03470 Isolate Unclassified
20 2791355267 Rhizobium sp. L18 Isolate Nodule
21 2802429633 Rhizobium anhuiense J3 Isolate Nodule
22 2802429637 Rhizobium anhuiense C15 Isolate Nodule
23 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
24 2818991272 Rhizobium sp. SLBN-4 Isolate Unclassified
25 2818991439 Agrobacterium tumefaciens 1187 Isolate Unclassified
26 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
27 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
28 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
29 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
30 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
31 2842217011 Rhizobium leguminosarum SEMIA 475 Isolate Nodule
32 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
33 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
34 2894817345 Aureimonas psammosilenae YIM DR1026 Isolate Unclassified
35 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
36 2913308742 Rhizobium halophytocola DSM 21600 Isolate Unclassified
37 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
38 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
39 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
40 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
41 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
42 2979100975 Agrobacterium pusense SORGH_AS 755 Isolate Unclassified
43 2984509177 Agrobacterium pusense SORGH_AS260 Isolate Aerial Root
44 2984518228 Agrobacterium pusense SORGH_AS285 Isolate Aerial Root
45 2984537506 Agrobacterium sp. SORGH_AS440 Isolate Aerial Root
46 2984601300 Rhizobium pusense SORGH_AS1083 Isolate Aerial Root
47 2989349275 Shinella kummerowiae CCBAU 25048 Isolate Unclassified
48 2989771324 Rhizobium rhizolycopersici DBTS2 Isolate Rhizosphere
49 2989776772 Rhizobium glycinendophyticum CL12 Isolate Unclassified
50 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
51 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
52 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
53 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
54 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
55 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
56 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
57 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
58 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
59 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
60 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
61 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
62 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
63 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
64 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
65 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
66 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
67 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
68 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
69 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
70 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
71 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
72 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
73 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
74 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
75 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
76 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
77 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
78 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
79 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
80 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
81 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
82 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
83 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
84 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
85 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
86 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
87 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
88 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
89 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
90 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
91 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
92 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
93 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
94 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
95 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
96 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
106 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
107 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
109 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
110 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
111 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
112 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
113 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
114 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
115 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
116 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
117 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
118 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
119 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
120 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
121 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
122 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
123 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
124 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
125 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
126 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
127 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
128 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
129 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
130 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
131 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
132 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
133 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
134 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
135 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
136 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
137 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
138 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
142 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
143 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
144 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
145 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
146 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
147 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
148 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
149 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
150 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
151 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
152 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
153 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
154 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
155 639633055 Rhizobium leguminosarum bv. viciae 3841 Isolate Unclassified
156 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
157 8005246636 Rhizobium wuzhouense W44 Isolate Rhizosphere
158 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
159 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
160 8054460903 Agrobacterium vaccinii B7.6 Isolate Unclassified
161 8056875544 Rhizobium halophilum TRM95001 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 75.11
Metatranscriptomes 0
Isolates 24.89

Biome Distribution

Category Percentage (%)
Aerial Root 1.72
Bulb 0
Endosphere 33.48
Nodule 6.44
Rhizoplane 3.86
Rhizosphere 19.31
Stem 0
Stem Tuber 0
Unclassified 35.19

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25158J39367_1000002 3300002739 Bacteria 73701
2 JGI25152J39213_1000254 3300002773 Bacteria 35531
3 JGI25152J39213_1003529 3300002773 Bacteria 5296
4 JGI25159J45721_1000057 3300002987 Bacteria 53636
5 JGI25151J46595_10008600 3300003187 Bacteria 4893
6 JGI25153J46596_10000440 3300003215 Bacteria 26742
7 rootH1_10150250 3300003316 Bacteria 2346
8 rootH2_10273541 3300003320 Bacteria 2402
9 rootL2_10364454 3300003322 Bacteria 1203
10 rootH1_10158016 3300003323 Bacteria 4097
11 JGI25160J50197_1000070 3300003354 Bacteria 110748
12 JGI25161J50226_1000026 3300003374 Bacteria 146134
13 Ga0055526_1013734 3300003771 Bacteria 3398
14 Ga0055524_1000837 3300003775 Bacteria 20200
15 Ga0055528_1000039 3300003790 Bacteria 112899
16 Ga0055528_1001643 3300003790 Bacteria 13158
17 Ga0055528_1001982 3300003790 Bacteria 11537
18 Ga0055540_1000626 3300003792 Bacteria 25158
19 Ga0055540_1002900 3300003792 Bacteria 8681
20 Ga0055543_1000085 3300004625 Bacteria 81274
21 Ga0065165_1001454 3300005262 Bacteria 25582
22 Ga0065165_1005545 3300005262 Bacteria 7028
23 Ga0065165_1009427 3300005262 Bacteria 4379
24 Ga0065704_10082808 3300005289 Bacteria 3549
25 Ga0070670_100000925 3300005331 Bacteria 23056
26 Ga0070668_100697192 3300005347 Bacteria 895
27 Ga0070663_100123933 3300005455 Bacteria 1955
28 Ga0068853_100259189 3300005539 Bacteria 1598
29 Ga0070665_100012173 3300005548 Bacteria 8674
30 Ga0070665_100086821 3300005548 Bacteria 3134
31 Ga0075368_10006286 3300006042 Bacteria 4143
32 Ga0075364_10053358 3300006051 Bacteria 2643
33 Ga0075367_10005948 3300006178 Bacteria 6123
34 Ga0075369_10002670 3300006186 Bacteria 6388
35 Ga0075366_10025537 3300006195 Bacteria 3452
36 Ga0075366_10032818 3300006195 Bacteria 3057
37 Ga0075370_10098077 3300006353 Bacteria 1695
38 Ga0099826_10000076 3300006948 Bacteria 51489
39 Ga0105244_10093818 3300009036 Bacteria 1474
40 Ga0105243_10278115 3300009148 Bacteria 1506
41 Ga0157373_10017173 3300013100 Bacteria 5268
42 Ga0157371_10000005 3300013102 Bacteria 416456
43 Ga0157371_10080269 3300013102 Bacteria 2310
44 Ga0157370_10002453 3300013104 Bacteria 22378
45 Ga0157370_10037404 3300013104 Bacteria 4705
46 Ga0157370_10050783 3300013104 Bacteria 3962
47 Ga0157369_10023054 3300013105 Bacteria 6939
48 Ga0209436_100016 3300025208 Bacteria 117496
49 Ga0207425_1001413 3300025245 Bacteria 10092
50 Ga0209129_1000092 3300025258 Bacteria 173874
51 Ga0209129_1000166 3300025258 Bacteria 97875
52 Ga0209673_1000161 3300025273 Bacteria 142073
53 Ga0209673_1000165 3300025273 Bacteria 138061
54 Ga0209673_1001595 3300025273 Bacteria 19981
55 Ga0209130_1000073 3300025284 Bacteria 174439
56 Ga0209130_1002741 3300025284 Bacteria 8335
57 Ga0209130_1026939 3300025284 Bacteria 1227
58 Ga0209025_1000336 3300025294 Bacteria 103514
59 Ga0209025_1002231 3300025294 Bacteria 21344
60 Ga0209564_1002104 3300025295 Bacteria 17004
61 Ga0209564_1014012 3300025295 Bacteria 3363
62 Ga0209758_1001073 3300025297 Bacteria 35582
63 Ga0209758_1018775 3300025297 Bacteria 3371
64 Ga0209256_1000144 3300025299 Bacteria 151157
65 Ga0209256_1003253 3300025299 Bacteria 11683
66 Ga0207426_1000140 3300025302 Bacteria 195664
67 Ga0209051_1000664 3300025303 Bacteria 38581
68 Ga0209051_1019972 3300025303 Bacteria 2906
69 Ga0209051_1030066 3300025303 Bacteria 2114
70 Ga0209051_1043124 3300025303 Bacteria 1586
71 Ga0209257_1006258 3300025304 Bacteria 7786
72 Ga0209257_1022812 3300025304 Bacteria 2220
73 Ga0207694_10737079 3300025924 Bacteria 831
74 Ga0207650_10015297 3300025925 Bacteria 5341
75 Ga0207709_10165151 3300025935 Bacteria 1548
76 Ga0207668_10460326 3300025972 Bacteria 1087
77 Ga0207668_10495340 3300025972 Bacteria 1050
78 Ga0207639_10202003 3300026041 Bacteria 1705
79 Ga0207678_10210770 3300026067 Bacteria 1662
80 Ga0209371_1000012 3300027312 Bacteria 748304
81 Ga0209282_1000039 3300027666 Bacteria 128517
82 Ga0209813_10005280 3300027866 Bacteria 3126
83 Ga0268266_10010083 3300028379 Bacteria 8285
84 Ga0268266_10012106 3300028379 Bacteria 7467
85 Ga0307515_10000017 3300028794 Bacteria 550465
86 Ga0268256_1000013 3300030500 Bacteria 752103
87 Ga0307513_10005235 3300031456 Bacteria 17180
88 Ga0307405_10143584 3300031731 Bacteria 1668
89 Ga0400483_091700 3300039062 Unclassified 1022
90 Ga0400483_236881 3300039062 Bacteria 5331
91 Ga0451802_0120499 3300041460 Bacteria 1038
92 Ga0451837_1654926 3300041494 Bacteria 3821
93 Ga0451841_0771765 3300041498 Bacteria 1393
94 Ga0451845_0426393 3300041501 Bacteria 3415
95 Ga0451849_0259573 3300041505 Bacteria 7990
96 Ga0451851_0308337 3300041507 Bacteria 2045
97 Ga0451843_0292514 3300041509 Bacteria 5859
98 Ga0451855_0342524 3300041511 Bacteria 9360
99 Ga0495606_0149383 3300046507 Bacteria 1373
100 Ga0495654_0001447 3300046530 Bacteria 16303
101 Ga0496100_0218318 3300048903 Bacteria 1398
102 Ga0496107_0021357 3300048910 Bacteria 4575
103 Ga0496111_0012797 3300048914 Bacteria 5692
104 Ga0496113_0056013 3300048916 Bacteria 2958
105 Ga0496116_0003434 3300048919 Bacteria 15658
106 Ga0496116_0039086 3300048919 Bacteria 3285
107 Ga0496116_0176282 3300048919 Bacteria 1151
108 Ga0496117_0000083 3300048920 Bacteria 218945
109 Ga0496117_0011171 3300048920 Bacteria 8068
110 Ga0496117_0066177 3300048920 Bacteria 2452
111 Ga0496118_0002038 3300048921 Bacteria 28553
112 Ga0496118_0069206 3300048921 Bacteria 2558
113 Ga0496118_0089810 3300048921 Bacteria 2120
114 Ga0496119_0006870 3300048922 Bacteria 10397
115 Ga0496119_0043848 3300048922 Bacteria 2822
116 Ga0496119_0046206 3300048922 Bacteria 2721
117 Ga0496120_0000030 3300048923 Bacteria 226066
118 Ga0496120_0163259 3300048923 Bacteria 1108
119 Ga0496121_0000174 3300048924 Bacteria 143186
120 Ga0496121_0000235 3300048924 Bacteria 118983
121 Ga0496121_0013423 3300048924 Bacteria 8802
122 Ga0496121_0102240 3300048924 Bacteria 2208
123 Ga0496122_0000367 3300048925 Bacteria 96866
124 Ga0496122_0004084 3300048925 Bacteria 18492
125 Ga0496122_0022635 3300048925 Bacteria 5578
126 Ga0496122_0022956 3300048925 Bacteria 5522
127 Ga0496122_0069034 3300048925 Bacteria 2533
128 Ga0496123_0000052 3300048926 Bacteria 236409
129 Ga0496123_0002905 3300048926 Bacteria 20054
130 Ga0496123_0008554 3300048926 Bacteria 9382
131 Ga0496123_0015770 3300048926 Bacteria 6175
132 Ga0496123_0105661 3300048926 Bacteria 1624
133 Ga0496124_0004202 3300048927 Bacteria 16954
134 Ga0496124_0007476 3300048927 Bacteria 11605
135 Ga0496124_0007956 3300048927 Bacteria 11158
136 Ga0496124_0071464 3300048927 Bacteria 2876
137 Ga0496124_0075727 3300048927 Bacteria 2779
138 Ga0496124_0148988 3300048927 Bacteria 1838
139 Ga0496124_0173652 3300048927 Bacteria 1666
140 Ga0496125_0013451 3300048928 Bacteria 8040
141 Ga0496125_0021702 3300048928 Bacteria 5978
142 Ga0496125_0069653 3300048928 Bacteria 2758
143 Ga0496126_0014134 3300048929 Bacteria 8081
144 Ga0496126_0117641 3300048929 Bacteria 2308
145 Ga0501032_0034394 3300049569 Bacteria 3470
146 Ga0501033_0000351 3300049570 Bacteria 43920
147 Ga0501034_0019886 3300049571 Bacteria 6860
148 Ga0501280_000644 3300049776 Bacteria 7856
149 Ga0501035_0000263 3300049822 Bacteria 62255
150 nmdc:mga03n38_26544_c1 3300050490 Bacteria 2393
151 nmdc:mga03n38_678_c1 3300050490 Bacteria 8855
152 nmdc:mga00v17_22_c1 3300050491 Bacteria 108510
153 nmdc:mga00v17_35896_c1 3300050491 Bacteria 2953
154 nmdc:mga00v17_68_c1 3300050491 Bacteria 62705
155 nmdc:mga0yw44_29295_c1 3300050492 Bacteria 3177
156 nmdc:mga0yw44_307728_c1 3300050492 Bacteria 1063
157 nmdc:mga0yw44_447207_c1 3300050492 Bacteria 876
158 nmdc:mga0k408_23486_c1 3300050493 Bacteria 3479
159 nmdc:mga0k408_50130_c1 3300050493 Bacteria 2417
160 nmdc:mga06z11_11302_c1 3300050494 Bacteria 3846
161 nmdc:mga06z11_2367_c1 3300050494 Bacteria 7176
162 nmdc:mga07m45_17523_c1 3300050496 Bacteria 3848
163 nmdc:mga07m45_201890_c1 3300050496 Bacteria 1157
164 nmdc:mga07m45_27648_c1 3300050496 Bacteria 3127
165 nmdc:mga07m45_370925_c1 3300050496 Bacteria 831
166 nmdc:mga07m45_85240_c1 3300050496 Bacteria 1807
167 nmdc:mga0sz30_13044_c1 3300050516 Bacteria 3246
168 nmdc:mga0sz30_728_c1 3300050516 Bacteria 12087
169 Ga0500618_000402 3300053125 Bacteria 29508
170 Ga0500658_0000280 3300053134 Bacteria 23185
171 Ga0500559_0002900 3300053136 Bacteria 8634
172 Ga0500559_0067144 3300053136 Bacteria 1610
173 Ga0500561_0000041 3300053137 Bacteria 26065
174 Ga0500573_0000633 3300053140 Bacteria 15485
175 Ga0500573_0017702 3300053140 Bacteria 4058

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2926760298 2926764873 214
2 3300048916 Ga0496113_0056013 Ga0496113_0056013_2275_2937 218
3 3300003323 rootH1_10158016 rootH1_101580163 219
4 3300013105 Ga0157369_10023054 Ga0157369_100230545 219
5 3300039062 Ga0400483_091700 Ga0400483_091700_184_846 219
6 iso_pu_bacteria 2643221637 2644207990 219
7 iso_pu_bacteria 2643221718 2644651392 219
8 3300039062 Ga0400483_236881 Ga0400483_236881_4197_4862 221
9 3300025284 Ga0209130_1026939 Ga0209130_10269392 223
10 3300048924 Ga0496121_0102240 Ga0496121_0102240_448_1119 223
11 3300048925 Ga0496122_0022635 Ga0496122_0022635_268_939 223
12 3300048926 Ga0496123_0008554 Ga0496123_0008554_49_720 223
13 3300048927 Ga0496124_0173652 Ga0496124_0173652_155_826 223
14 3300053136 Ga0500559_0067144 Ga0500559_0067144_287_967 224
15 iso_pu_bacteria 2838029111 2838035410 224
16 iso_pu_bacteria 2841840854 2841846481 224
17 iso_pu_bacteria 2842140634 2842146264 224
18 iso_pu_bacteria 2842475841 2842480142 224
19 iso_pu_bacteria 2842502639 2842508022 224
20 iso_pu_bacteria 2643221689 2644497716 225
21 iso_pu_bacteria 2554235003 2554244278 226
22 iso_pu_bacteria 2558860242 2559297917 226
23 iso_pu_bacteria 2643221693 2644522454 226
24 iso_pu_bacteria 2808606387 2808989719 226
25 iso_pu_bacteria 2838736955 2838740181 226
26 iso_pu_bacteria 2841840854 2841843694 226
27 iso_pu_bacteria 2842140634 2842143414 226
28 iso_pu_bacteria 2894817345 2894821881 226
29 iso_pu_bacteria 2979089926 2979090018 226
30 iso_pu_bacteria 2979095461 2979095555 226
31 iso_pu_bacteria 2989771324 2989773285 226
32 iso_pu_bacteria 639633055 639645329 226
33 iso_pu_bacteria 8056875544 8056875869 226
34 3300048903 Ga0496100_0218318 Ga0496100_0218318_384_1067 227
35 3300048919 Ga0496116_0003434 Ga0496116_0003434_2000_2683 227
36 3300048920 Ga0496117_0011171 Ga0496117_0011171_6251_6934 227
37 3300048922 Ga0496119_0043848 Ga0496119_0043848_587_1270 227
38 3300048924 Ga0496121_0013423 Ga0496121_0013423_6300_6983 227
39 3300048925 Ga0496122_0004084 Ga0496122_0004084_12630_13313 227
40 3300048926 Ga0496123_0002905 Ga0496123_0002905_13072_13755 227
41 3300048927 Ga0496124_0004202 Ga0496124_0004202_11976_12659 227
42 3300048928 Ga0496125_0021702 Ga0496125_0021702_4869_5552 227
43 3300053136 Ga0500559_0002900 Ga0500559_0002900_6183_6866 227
44 iso_pu_bacteria 2600255279 2601612944 227
45 iso_pu_bacteria 2600255308 2601748490 227
46 iso_pu_bacteria 2818991439 2819560476 227
47 iso_pu_bacteria 2899845264 2899847988 227
48 iso_pu_bacteria 2933594066 2933596914 227
49 iso_pu_bacteria 2979100975 2979101573 227
50 iso_pu_bacteria 2984509177 2984510476 227
51 iso_pu_bacteria 2984518228 2984518818 227
52 iso_pu_bacteria 2984537506 2984538827 227
53 iso_pu_bacteria 2984601300 2984605522 227
54 iso_pu_bacteria 650716007 650842356 227
55 iso_pu_bacteria 2643221558 2643811110 228
56 iso_pu_bacteria 8018150411 8018154109 228
57 iso_pu_bacteria 2558860983 2561467821 229
58 iso_pu_bacteria 2929138655 2929143762 229
59 iso_pu_bacteria 8005658619 8005662542 229
60 3300002773 JGI25152J39213_1003529 JGI25152J39213_10035297 230
61 3300003187 JGI25151J46595_10008600 JGI25151J46595_100086002 230
62 3300005548 Ga0070665_100012173 Ga0070665_10001217310 230
63 3300006042 Ga0075368_10006286 Ga0075368_100062864 230
64 3300006051 Ga0075364_10053358 Ga0075364_100533582 230
65 3300006178 Ga0075367_10005948 Ga0075367_100059482 230
66 3300006186 Ga0075369_10002670 Ga0075369_100026702 230
67 3300006195 Ga0075366_10032818 Ga0075366_100328182 230
68 3300006353 Ga0075370_10098077 Ga0075370_100980771 230
69 3300006948 Ga0099826_10000076 Ga0099826_1000007641 230
70 3300009148 Ga0105243_10278115 Ga0105243_102781152 230
71 3300013104 Ga0157370_10002453 Ga0157370_100024536 230
72 3300013104 Ga0157370_10037404 Ga0157370_100374046 230
73 3300025258 Ga0209129_1000166 Ga0209129_100016621 230
74 3300025294 Ga0209025_1000336 Ga0209025_100033624 230
75 3300025297 Ga0209758_1018775 Ga0209758_10187754 230
76 3300025303 Ga0209051_1043124 Ga0209051_10431241 230
77 3300025304 Ga0209257_1022812 Ga0209257_10228123 230
78 3300025935 Ga0207709_10165151 Ga0207709_101651511 230
79 3300026041 Ga0207639_10202003 Ga0207639_102020032 230
80 3300027666 Ga0209282_1000039 Ga0209282_100003977 230
81 3300027866 Ga0209813_10005280 Ga0209813_100052802 230
82 3300028379 Ga0268266_10010083 Ga0268266_1001008310 230
83 3300028794 Ga0307515_10000017 Ga0307515_10000017174 230
84 3300031456 Ga0307513_10005235 Ga0307513_100052355 230
85 3300041460 Ga0451802_0120499 Ga0451802_0120499_286_978 230
86 3300048919 Ga0496116_0176282 Ga0496116_0176282_440_1132 230
87 3300048921 Ga0496118_0089810 Ga0496118_0089810_950_1642 230
88 3300050490 nmdc:mga03n38_26544_c1 nmdc:mga03n38_26544_c1_402_1100 230
89 3300050494 nmdc:mga06z11_2367_c1 nmdc:mga06z11_2367_c1_1302_2000 230
90 3300053125 Ga0500618_000402 Ga0500618_000402_19888_20580 230
91 3300053137 Ga0500561_0000041 Ga0500561_0000041_12579_13277 230
92 iso_pu_bacteria 2738541317 2738947948 230
93 3300003322 rootL2_10364454 rootL2_103644542 231
94 3300005289 Ga0065704_10082808 Ga0065704_100828082 231
95 3300005347 Ga0070668_100697192 Ga0070668_1006971921 231
96 3300009036 Ga0105244_10093818 Ga0105244_100938182 231
97 3300013100 Ga0157373_10017173 Ga0157373_100171734 231
98 3300013102 Ga0157371_10000005 Ga0157371_1000000595 231
99 3300025972 Ga0207668_10460326 Ga0207668_104603262 231
100 3300027312 Ga0209371_1000012 Ga0209371_100001223 231
101 3300030500 Ga0268256_1000013 Ga0268256_100001323 231
102 3300048920 Ga0496117_0000083 Ga0496117_0000083_177592_178293 231
103 3300048921 Ga0496118_0002038 Ga0496118_0002038_27506_28207 231
104 3300048921 Ga0496118_0069206 Ga0496118_0069206_686_1387 231
105 3300048922 Ga0496119_0006870 Ga0496119_0006870_3317_4018 231
106 3300048922 Ga0496119_0046206 Ga0496119_0046206_244_945 231
107 3300048923 Ga0496120_0000030 Ga0496120_0000030_194236_194937 231
108 3300048925 Ga0496122_0000367 Ga0496122_0000367_30669_31370 231
109 3300048926 Ga0496123_0000052 Ga0496123_0000052_30669_31370 231
110 3300048927 Ga0496124_0007956 Ga0496124_0007956_9911_10612 231
111 3300048927 Ga0496124_0071464 Ga0496124_0071464_1558_2259 231
112 3300048928 Ga0496125_0069653 Ga0496125_0069653_235_936 231
113 3300048929 Ga0496126_0014134 Ga0496126_0014134_6140_6841 231
114 3300050490 nmdc:mga03n38_678_c1 nmdc:mga03n38_678_c1_7307_8008 231
115 3300050491 nmdc:mga00v17_22_c1 nmdc:mga00v17_22_c1_64184_64885 231
116 3300050491 nmdc:mga00v17_35896_c1 nmdc:mga00v17_35896_c1_2047_2748 231
117 3300050492 nmdc:mga0yw44_307728_c1 nmdc:mga0yw44_307728_c1_218_919 231
118 3300050492 nmdc:mga0yw44_447207_c1 nmdc:mga0yw44_447207_c1_13_714 231
119 3300050493 nmdc:mga0k408_50130_c1 nmdc:mga0k408_50130_c1_1179_1880 231
120 3300050494 nmdc:mga06z11_11302_c1 nmdc:mga06z11_11302_c1_2381_3082 231
121 3300050496 nmdc:mga07m45_201890_c1 nmdc:mga07m45_201890_c1_438_1139 231
122 3300050496 nmdc:mga07m45_27648_c1 nmdc:mga07m45_27648_c1_2099_2800 231
123 3300050496 nmdc:mga07m45_85240_c1 nmdc:mga07m45_85240_c1_669_1370 231
124 3300050516 nmdc:mga0sz30_13044_c1 nmdc:mga0sz30_13044_c1_2428_3129 231
125 3300050516 nmdc:mga0sz30_728_c1 nmdc:mga0sz30_728_c1_714_1415 231
126 iso_pu_bacteria 2643221607 2644049704 231
127 iso_pu_bacteria 2643221686 2644481985 231
128 iso_pu_bacteria 2738541293 2738805765 231
129 iso_pu_bacteria 2738541333 2739034511 231
130 iso_pu_bacteria 2791355267 2793365029 231
131 iso_pu_bacteria 2802429633 2806049040 231
132 iso_pu_bacteria 2802429637 2806078063 231
133 iso_pu_bacteria 2842217011 2842219615 231
134 iso_pu_bacteria 2989349275 2989351168 231
135 3300005262 Ga0065165_1005545 Ga0065165_10055452 232
136 3300005539 Ga0068853_100259189 Ga0068853_1002591891 232
137 3300025284 Ga0209130_1002741 Ga0209130_10027416 232
138 3300048910 Ga0496107_0021357 Ga0496107_0021357_2417_3124 232
139 3300048919 Ga0496116_0039086 Ga0496116_0039086_1169_1876 232
140 3300048927 Ga0496124_0007476 Ga0496124_0007476_3621_4328 232
141 iso_pu_bacteria 2510461069 2510839119 232
142 iso_pu_bacteria 2600254933 2600373873 232
143 iso_pu_bacteria 2643221653 2644299872 232
144 iso_pu_bacteria 2643221719 2644658099 232
145 iso_pu_bacteria 2818991272 2819244658 232
146 iso_pu_bacteria 2818991461 2819689116 232
147 iso_pu_bacteria 2989776772 2989780087 232
148 iso_pu_bacteria 8005246636 8005249228 232
149 iso_pu_bacteria 8054460903 8054464387 232
150 3300003792 Ga0055540_1002900 Ga0055540_10029008 233
151 3300025303 Ga0209051_1000664 Ga0209051_100066426 233
152 3300025972 Ga0207668_10495340 Ga0207668_104953402 233
153 3300048920 Ga0496117_0066177 Ga0496117_0066177_442_1143 233
154 3300048923 Ga0496120_0163259 Ga0496120_0163259_361_1062 233
155 3300048924 Ga0496121_0000174 Ga0496121_0000174_137355_138056 233
156 3300048925 Ga0496122_0022956 Ga0496122_0022956_4064_4765 233
157 3300048926 Ga0496123_0105661 Ga0496123_0105661_872_1573 233
158 3300048927 Ga0496124_0075727 Ga0496124_0075727_61_762 233
159 3300048928 Ga0496125_0013451 Ga0496125_0013451_5174_5875 233
160 3300048929 Ga0496126_0117641 Ga0496126_0117641_470_1171 233
161 3300049569 Ga0501032_0034394 Ga0501032_0034394_1705_2415 233
162 3300049570 Ga0501033_0000351 Ga0501033_0000351_34228_34938 233
163 3300049822 Ga0501035_0000263 Ga0501035_0000263_23396_24106 233
164 3300050491 nmdc:mga00v17_68_c1 nmdc:mga00v17_68_c1_34612_35325 233
165 3300053140 Ga0500573_0000633 Ga0500573_0000633_9868_10581 233
166 3300053140 Ga0500573_0017702 Ga0500573_0017702_2980_3693 233
167 3300003790 Ga0055528_1000039 Ga0055528_100003960 234
168 3300005262 Ga0065165_1009427 Ga0065165_10094272 234
169 3300025273 Ga0209673_1000161 Ga0209673_100016182 234
170 3300046507 Ga0495606_0149383 Ga0495606_0149383_93_815 234
171 3300046530 Ga0495654_0001447 Ga0495654_0001447_14645_15358 234
172 3300048914 Ga0496111_0012797 Ga0496111_0012797_2978_3694 234
173 3300048925 Ga0496122_0069034 Ga0496122_0069034_943_1659 234
174 3300048926 Ga0496123_0015770 Ga0496123_0015770_294_1010 234
175 3300048927 Ga0496124_0148988 Ga0496124_0148988_1057_1773 234
176 3300049776 Ga0501280_000644 Ga0501280_000644_2160_2906 234
177 iso_pu_bacteria 2913308742 2913312843 234
178 3300002739 JGI25158J39367_1000002 JGI25158J39367_100000258 235
179 3300002773 JGI25152J39213_1000254 JGI25152J39213_100025411 235
180 3300002987 JGI25159J45721_1000057 JGI25159J45721_100005751 235
181 3300003215 JGI25153J46596_10000440 JGI25153J46596_1000044023 235
182 3300003316 rootH1_10150250 rootH1_101502503 235
183 3300003320 rootH2_10273541 rootH2_102735412 235
184 3300003354 JGI25160J50197_1000070 JGI25160J50197_1000070115 235
185 3300003374 JGI25161J50226_1000026 JGI25161J50226_100002685 235
186 3300003771 Ga0055526_1013734 Ga0055526_10137344 235
187 3300003775 Ga0055524_1000837 Ga0055524_10008376 235
188 3300003790 Ga0055528_1001643 Ga0055528_10016437 235
189 3300003790 Ga0055528_1001982 Ga0055528_100198215 235
190 3300003792 Ga0055540_1000626 Ga0055540_100062619 235
191 3300004625 Ga0055543_1000085 Ga0055543_100008518 235
192 3300005262 Ga0065165_1001454 Ga0065165_10014548 235
193 3300005331 Ga0070670_100000925 Ga0070670_10000092523 235
194 3300005455 Ga0070663_100123933 Ga0070663_1001239332 235
195 3300005548 Ga0070665_100086821 Ga0070665_1000868213 235
196 3300006195 Ga0075366_10025537 Ga0075366_100255372 235
197 3300013102 Ga0157371_10080269 Ga0157371_100802694 235
198 3300013104 Ga0157370_10050783 Ga0157370_100507837 235
199 3300025208 Ga0209436_100016 Ga0209436_10001683 235
200 3300025245 Ga0207425_1001413 Ga0207425_10014137 235
201 3300025258 Ga0209129_1000092 Ga0209129_100009251 235
202 3300025273 Ga0209673_1000165 Ga0209673_100016549 235
203 3300025273 Ga0209673_1001595 Ga0209673_100159521 235
204 3300025284 Ga0209130_1000073 Ga0209130_1000073169 235
205 3300025294 Ga0209025_1002231 Ga0209025_10022314 235
206 3300025295 Ga0209564_1002104 Ga0209564_100210414 235
207 3300025295 Ga0209564_1014012 Ga0209564_10140122 235
208 3300025297 Ga0209758_1001073 Ga0209758_100107337 235
209 3300025299 Ga0209256_1000144 Ga0209256_1000144116 235
210 3300025299 Ga0209256_1003253 Ga0209256_10032538 235
211 3300025302 Ga0207426_1000140 Ga0207426_100014081 235
212 3300025303 Ga0209051_1019972 Ga0209051_10199724 235
213 3300025303 Ga0209051_1030066 Ga0209051_10300662 235
214 3300025304 Ga0209257_1006258 Ga0209257_10062587 235
215 3300025924 Ga0207694_10737079 Ga0207694_107370791 235
216 3300025925 Ga0207650_10015297 Ga0207650_100152974 235
217 3300026067 Ga0207678_10210770 Ga0207678_102107702 235
218 3300028379 Ga0268266_10012106 Ga0268266_100121065 235
219 3300031731 Ga0307405_10143584 Ga0307405_101435841 235
220 3300041494 Ga0451837_1654926 Ga0451837_1654926_2577_3284 235
221 3300041498 Ga0451841_0771765 Ga0451841_0771765_511_1218 235
222 3300041501 Ga0451845_0426393 Ga0451845_0426393_1253_1960 235
223 3300041505 Ga0451849_0259573 Ga0451849_0259573_1728_2435 235
224 3300041507 Ga0451851_0308337 Ga0451851_0308337_44_751 235
225 3300041509 Ga0451843_0292514 Ga0451843_0292514_4504_5211 235
226 3300041511 Ga0451855_0342524 Ga0451855_0342524_6582_7289 235
227 3300048924 Ga0496121_0000235 Ga0496121_0000235_112465_113259 235
228 3300049571 Ga0501034_0019886 Ga0501034_0019886_746_1453 235
229 3300050492 nmdc:mga0yw44_29295_c1 nmdc:mga0yw44_29295_c1_1214_1930 235
230 3300050493 nmdc:mga0k408_23486_c1 nmdc:mga0k408_23486_c1_2210_2917 235
231 3300050496 nmdc:mga07m45_17523_c1 nmdc:mga07m45_17523_c1_2128_2835 235
232 3300050496 nmdc:mga07m45_370925_c1 nmdc:mga07m45_370925_c1_34_741 235
233 3300053134 Ga0500658_0000280 Ga0500658_0000280_14462_15169 235

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

92

237

0.85

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

89

257

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ucf-assembly1.cif.gz_A crystal structure of a small-chain dehydrogenase 0.8394 13 230
3d7l-assembly4.cif.gz_B the crystal structure of the protein lin1944 from listeria innocua . 0.8345 13 227
1sny-assembly1.cif.gz_A-2 carbonyl reductase sniffer of d. melanogaster 0.8316 13 235
3ucf-assembly1.cif.gz_D crystal structure of a small-chain dehydrogenase 0.8301 13 230
3wxb-assembly1.cif.gz_A crystal structure of nadph bound carbonyl reductase from chicken fatty liver 0.8265 6 235
ID Description Score Start End Superfamily
af_F1R2C9_2_262_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8843 13 235 3.40.50.720
af_I1MG92_30_291_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8635 7 235 3.40.50.720
af_Q7Z9I3_1_253_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8509 11 235 3.40.50.720
af_A5WW49_23_278_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8506 14 235 3.40.50.720
3d7lD00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8415 13 227 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A0Q7NZ68-F1-model_v4 C factor 0.9648 6 235 GO:0005737
GO:0016491
AF-A0A1X6ZFN1-F1-model_v4 C-factor 0.9627 13 235 GO:0005737
GO:0016491
AF-A0A1X6Y6E2-F1-model_v4 C-factor 0.9622 13 235 GO:0005737
GO:0016491
AF-A0A4U0RD69-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9622 13 235 GO:0005737
GO:0016491
AF-A0A839XCS3-F1-model_v4 deleted 0.9602 1 153

Feature Viewer

pLDDT pTM Quality
91.52 0.91 High
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Predicted Structure (AlphaFold2)

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