F345398

General Info

Members Datasets Scaffolds Average Seq Length
232 169 464 436

Family's Representative Sequence

Representative Sequence 3300046515|Ga0495620_0008484|Ga0495620_0008484_899_2245
Length 433
Sequence MATEYGQGYGYPSGPGFRGAGAEERRHRLPAPLRAPIEARSWREFGYVMLSLPLGLIMFTFLGIPVLAAALAGCRGFGALERARARGLLGLDVAAPEPLRVRKHGAMAWMGAVLKNGPAWRHLLYAVVQFPWSVFSFMVSLSFWAYGWAMLTYPLWFWLFPVYGGQGGLQLYGDETHGIYLDNPFEITVTALLGLLITMATPWIVRALTTVDRVMVAGLLGLASRVVELESDRGVVVDTAAADLRRIERDLHDGAQARLVNLAMGLGLAKEKLTEDPQAAARMVDEAHGEVKTALQELRDLARGIHPAVLTDRGLDAALSSVASRCTVPVQVDVDLPARPAPAIEGIAYFTVSELLQNISKHARATRATVDVWRVENRLMLQVVDDGVGGADVSGGSGLAGLAERLGAVDGILVVDSPVGGPTRITAELPWRG

Samples

Sample ID Description Type Environment
1 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
5 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
6 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
7 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
8 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
9 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
10 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
11 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
12 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
13 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
14 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
15 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
16 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
17 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
18 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
19 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
20 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
21 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
22 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
23 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
24 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
25 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
26 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
27 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
28 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
29 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
30 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
31 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
32 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
33 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
34 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
35 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
36 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
37 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
38 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
39 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
40 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
41 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
42 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
43 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
44 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
45 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
46 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
47 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
48 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
49 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
50 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
51 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
52 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
53 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
54 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
55 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
56 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
57 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
58 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
59 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
60 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
61 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
62 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
63 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
64 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
65 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
66 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
67 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
68 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
69 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
70 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
71 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
72 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
73 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
74 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
75 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
76 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
77 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
78 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
79 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
80 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
81 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
82 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
83 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
84 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
85 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
86 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
87 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
88 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
89 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
90 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
100 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
101 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
102 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
104 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
105 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
106 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
107 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
108 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
109 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
110 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
111 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
112 2643221578 Streptomyces sp. Root63 Isolate Unclassified
113 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
114 2643221647 Streptomyces sp. Root369 Isolate Unclassified
115 2643221670 Streptomyces sp. Root431 Isolate Unclassified
116 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
117 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
118 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
119 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
120 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
121 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
122 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
123 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
124 2808606448 Streptomyces sp. 193411 Isolate Unclassified
125 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
126 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
127 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
128 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
129 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
130 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
131 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
132 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
133 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
134 2862574272 Streptomyces sp. AcE210 Isolate Nodule
135 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
136 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
137 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
138 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
139 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
140 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
141 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
142 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
143 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
144 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
145 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
146 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
147 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
148 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
149 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
150 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
151 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
152 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
153 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
154 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
155 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
156 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
157 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
158 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
159 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
160 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
161 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
162 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
163 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
164 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
165 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
166 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
167 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
168 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
169 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 71.55
Metatranscriptomes 1.29
Isolates 27.16

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.86
Nodule 1.29
Rhizoplane 0.43
Rhizosphere 75.43
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495620_0008484 3300046515 Bacteria 5512
2 rootH1_10005985 3300003316 Bacteria 4732
3 rootH2_10004699 3300003320 Bacteria 5029
4 Ga0006562J51391_1071470 3300003578 Bacteria 3260
5 Ga0006562J51391_1071471 3300003578 Bacteria 3241
6 Ga0006562J51391_1072885 3300003578 Bacteria 8140
7 Ga0105251_10044508 3300009011 Bacteria 2144
8 Ga0105250_10063210 3300009092 Bacteria 1490
9 Ga0105245_10222029 3300009098 Bacteria 1824
10 Ga0105248_10150834 3300009177 Bacteria 2622
11 Ga0105246_10000209 3300011119 Bacteria 29632
12 Ga0157372_10089271 3300013307 Bacteria 3502
13 Ga0183367_1002 3300015688 Bacteria 1101531
14 Ga0307517_10002248 3300028786 Bacteria 31157
15 Ga0307515_10012023 3300028794 Bacteria 16342
16 Ga0307515_10204195 3300028794 Bacteria 1842
17 Ga0307511_10012022 3300030521 Bacteria 8516
18 Ga0307511_10035763 3300030521 Bacteria 4331
19 Ga0307512_10087641 3300030522 Bacteria 2190
20 Ga0307513_10018570 3300031456 Bacteria 8304
21 Ga0307509_10029871 3300031507 Bacteria 6040
22 Ga0307509_10032048 3300031507 Bacteria 5795
23 Ga0307508_10010063 3300031616 Bacteria 8664
24 Ga0307508_10038901 3300031616 Bacteria 4273
25 Ga0307514_10004492 3300031649 Bacteria 12825
26 Ga0307514_10072454 3300031649 Bacteria 2580
27 Ga0307516_10003147 3300031730 Bacteria 21473
28 Ga0307516_10021994 3300031730 Bacteria 6552
29 Ga0307518_10040779 3300031838 Bacteria 3377
30 Ga0307507_10012017 3300033179 Bacteria 10793
31 Ga0307507_10041799 3300033179 Bacteria 4581
32 Ga0307510_10023251 3300033180 Bacteria 7189
33 Ga0307510_10050553 3300033180 Bacteria 4407
34 Ga0307510_10109303 3300033180 Bacteria 2514
35 Ga0395898_0003554 3300037466 Bacteria 17379
36 Ga0439436_0000287 3300041404 Bacteria 12206
37 Ga0439436_0011696 3300041404 Bacteria 2666
38 Ga0439439_0000731 3300041406 Bacteria 5889
39 Ga0451853_0165357 3300041512 Bacteria 1816
40 Ga0451853_3027886 3300041512 Bacteria 2829
41 Ga0439449_0000253 3300042007 Bacteria 19123
42 Ga0439455_0014731 3300042012 Bacteria 1789
43 Ga0439457_005364 3300042014 Bacteria 3234
44 Ga0439457_005682 3300042014 Bacteria 3106
45 Ga0439462_0004777 3300042015 Bacteria 3321
46 Ga0450903_000334 3300042138 Bacteria 10335
47 Ga0450906_005004 3300042145 Bacteria 2749
48 Ga0466969_0087411 3300044656 Bacteria 1480
49 Ga0466972_0005313 3300044658 Bacteria 6449
50 Ga0466972_0045392 3300044658 Bacteria 2130
51 Ga0466965_0003339 3300044683 Bacteria 7030
52 Ga0466965_0048630 3300044683 Bacteria 2101
53 Ga0466966_0002647 3300044684 Bacteria 11730
54 Ga0466966_0011582 3300044684 Bacteria 5846
55 Ga0466961_0001908 3300044693 Bacteria 12997
56 Ga0466961_0012275 3300044693 Bacteria 5477
57 Ga0466963_0001809 3300044694 Bacteria 11651
58 Ga0466963_0007834 3300044694 Bacteria 6391
59 Ga0466963_0087945 3300044694 Bacteria 2113
60 Ga0466971_0000156 3300044719 Bacteria 25560
61 Ga0466968_0019198 3300044735 Bacteria 2750
62 Ga0466970_0011719 3300044765 Bacteria 4471
63 Ga0466957_0000352 3300044842 Bacteria 22556
64 Ga0466957_0031433 3300044842 Bacteria 3173
65 Ga0466960_0037671 3300044901 Bacteria 2269
66 Ga0466959_0009389 3300045049 Bacteria 6954
67 Ga0466958_0000270 3300045836 Bacteria 19976
68 Ga0466967_0011425 3300045976 Bacteria 6723
69 Ga0466967_0039510 3300045976 Bacteria 4057
70 Ga0495592_0020380 3300046454 Bacteria 5042
71 Ga0495603_0001519 3300046455 Bacteria 13539
72 Ga0495603_0002726 3300046455 Bacteria 10412
73 Ga0495603_0010660 3300046455 Bacteria 5572
74 Ga0495629_0001213 3300046459 Bacteria 20237
75 Ga0495629_0010956 3300046459 Bacteria 6592
76 Ga0495629_0020665 3300046459 Bacteria 4701
77 Ga0495629_0021365 3300046459 Bacteria 4620
78 Ga0495651_0031257 3300046462 Bacteria 4153
79 Ga0495605_0011469 3300046474 Bacteria 4937
80 Ga0495639_0017856 3300046475 Bacteria 3083
81 Ga0495662_0000039 3300046476 Bacteria 43770
82 Ga0495662_0015493 3300046476 Bacteria 3700
83 Ga0495664_0002481 3300046477 Bacteria 9929
84 Ga0495594_0026481 3300046499 Bacteria 3120
85 Ga0495594_0039557 3300046499 Bacteria 2579
86 Ga0495594_0133861 3300046499 Bacteria 1404
87 Ga0495606_0034152 3300046507 Bacteria 3495
88 Ga0495616_0009102 3300046513 Bacteria 5825
89 Ga0495620_0016788 3300046515 Bacteria 3664
90 Ga0495628_0042057 3300046516 Bacteria 3646
91 Ga0495631_0010123 3300046518 Bacteria 4681
92 Ga0495637_0032674 3300046520 Bacteria 2291
93 Ga0495652_0024586 3300046529 Bacteria 5330
94 Ga0495640_0004219 3300046533 Bacteria 11498
95 Ga0495640_0055550 3300046533 Bacteria 2709
96 Ga0495587_0000639 3300046536 Bacteria 23492
97 Ga0495622_0048747 3300046557 Bacteria 1967
98 Ga0495622_0053384 3300046557 Bacteria 1875
99 Ga0495622_0056962 3300046557 Bacteria 1812
100 Ga0495667_0041739 3300046559 Bacteria 3042
101 Ga0495634_0004476 3300046642 Bacteria 10962
102 Ga0495634_0100012 3300046642 Bacteria 1874
103 Ga0495625_0069314 3300046660 Bacteria 2477
104 Ga0495625_0098911 3300046660 Bacteria 2006
105 Ga0495635_0003345 3300046663 Bacteria 11085
106 Ga0495635_0029707 3300046663 Bacteria 3801
107 Ga0495588_0006184 3300046674 Bacteria 5378
108 Ga0495588_0018391 3300046674 Bacteria 3406
109 Ga0495588_0042725 3300046674 Bacteria 2318
110 Ga0495657_0003099 3300046675 Bacteria 13727
111 Ga0495657_0004291 3300046675 Bacteria 11383
112 Ga0495646_0020895 3300046680 Bacteria 4139
113 Ga0495613_0032687 3300046689 Bacteria 3865
114 Ga0495613_0062526 3300046689 Bacteria 2724
115 Ga0495589_0074306 3300046794 Bacteria 1658
116 Ga0495600_0006461 3300046809 Bacteria 7138
117 Ga0495581_0019380 3300047315 Bacteria 3949
118 Ga0495581_0073804 3300047315 Bacteria 1974
119 Ga0495581_0120199 3300047315 Bacteria 1529
120 Ga0495636_0025783 3300047318 Bacteria 2388
121 Ga0495676_0016538 3300047321 Bacteria 6542
122 Ga0495676_0020924 3300047321 Bacteria 5727
123 Ga0495676_0054601 3300047321 Bacteria 3174
124 Ga0495680_0076854 3300047322 Bacteria 2530
125 Ga0495683_0017923 3300047323 Bacteria 3666
126 Ga0495687_002461 3300047443 Bacteria 14807
127 Ga0495687_004954 3300047443 Bacteria 8711
128 Ga0495675_0034163 3300047444 Bacteria 3245
129 Ga0495685_001218 3300047447 Bacteria 7895
130 Ga0495685_003964 3300047447 Bacteria 4755
131 Ga0495681_0004415 3300047470 Bacteria 9603
132 Ga0495593_0006124 3300047673 Bacteria 7077
133 Ga0495593_0070616 3300047673 Bacteria 1814
134 Ga0495602_0137230 3300048088 Bacteria 1941
135 Ga0495614_0002658 3300048089 Bacteria 7948
136 Ga0495614_0094398 3300048089 Bacteria 1303
137 Ga0495626_0064755 3300048091 Bacteria 1655
138 Ga0496109_0019648 3300048912 Bacteria 5959
139 Ga0501033_0098667 3300049570 Bacteria 2133
140 Ga0501034_0035406 3300049571 Bacteria 5061
141 Ga0501034_0176495 3300049571 Bacteria 2102
142 Ga0501036_0000337 3300049572 Bacteria 32891
143 Ga0501036_0090381 3300049572 Bacteria 2587
144 Ga0501036_0106887 3300049572 Bacteria 2366
145 Ga0501037_0004712 3300049573 Bacteria 9914
146 Ga0501038_0016572 3300049574 Bacteria 6680
147 Ga0501038_0046983 3300049574 Bacteria 3741
148 Ga0501038_0184533 3300049574 Bacteria 1682
149 Ga0501042_0011589 3300049578 Bacteria 5954
150 Ga0501043_0010693 3300049579 Bacteria 7189
151 Ga0501043_0018819 3300049579 Bacteria 5421
152 Ga0501043_0067272 3300049579 Bacteria 2814
153 Ga0501046_0024152 3300049580 Bacteria 4991
154 Ga0501047_0011406 3300049581 Bacteria 8411
155 Ga0501047_0173704 3300049581 Bacteria 2023
156 Ga0501047_0248133 3300049581 Bacteria 1629
157 Ga0501070_0002684 3300049586 Bacteria 15538
158 Ga0501074_0003468 3300049590 Bacteria 11193
159 Ga0501080_0080497 3300049742 Bacteria 3027
160 Ga0501035_0002183 3300049822 Bacteria 19412
161 Ga0501035_0034661 3300049822 Bacteria 4585
162 Ga0501035_0063959 3300049822 Bacteria 3271
163 Ga0501044_0050625 3300049823 Bacteria 4285
164 Ga0501044_0064727 3300049823 Bacteria 3731
165 Ga0501044_0229074 3300049823 Bacteria 1806
166 Ga0500640_007463 3300053095 Bacteria 4257
167 Ga0500560_004287 3300053107 Bacteria 3015
168 Ga0466962_0004201 3300061719 Bacteria 6895
169 Ga0466962_0011792 3300061719 Bacteria 4209
170 2554256865 2554235005 Bacteria 6457341
171 2585308150 2582581313 Bacteria 10042643
172 2585319536 2582581314 Bacteria 11452267
173 2616696858 2616644814 Bacteria 11555299
174 2616901993 2616644941 Bacteria 8510691
175 2643902853 2643221578 Bacteria 9213798
176 2643942050 2643221587 Bacteria 7586415
177 2644261655 2643221647 Bacteria 10741251
178 2644389698 2643221670 Bacteria 6497041
179 2644404637 2643221673 Bacteria 9196637
180 2644429133 2643221677 Bacteria 7584031
181 2784589659 2784132148 Bacteria 8627943
182 2785341937 2784746763 Bacteria 9783172
183 2785370715 2784746768 Bacteria 10036182
184 2786671900 2786546132 Bacteria 10419719
185 2808843263 2808606359 Bacteria 9866990
186 2808912847 2808606375 Bacteria 9466072
187 2809233333 2808606448 Bacteria 8656184
188 2812356776 2811994879 Bacteria 9313447
189 2812479496 2811994917 Bacteria 7761064
190 2819695285 2818991463 Bacteria 7948711
191 2852640396 2852635781 Bacteria 8251373
192 2862185396 2862178590 Bacteria 8583590
193 2862286793 2862281513 Bacteria 9621493
194 2862292171 2862290372 Bacteria 7471434
195 2862383779 2862382967 Bacteria 10317375
196 2862516846 2862507626 Bacteria 9425308
197 2862578250 2862574272 Bacteria 10567477
198 2863411624 2863404153 Bacteria 9672205
199 2873154753 2873151551 Bacteria 8625867
200 2875395967 2875391855 Bacteria 7600475
201 2877679871 2877676314 Bacteria 9512378
202 2912718529 2912715099 Bacteria 9460473
203 2912730857 2912723979 Bacteria 8557534
204 2912762060 2912757875 Bacteria 7940295
205 2918505753 2918501144 Bacteria 8668083
206 2919475984 2919468124 Bacteria 9133025
207 2946048645 2946045630 Bacteria 8527308
208 2946069097 2946064051 Bacteria 8957905
209 2947227841 2947224130 Bacteria 9938529
210 2954003059 2954002825 Bacteria 9173742
211 2954384825 2954380949 Bacteria 10050426
212 2954678174 2954673503 Bacteria 9685905
213 2954695636 2954691527 Bacteria 10720516
214 2954710829 2954701450 Bacteria 10834262
215 2954715062 2954711539 Bacteria 10867210
216 2954725004 2954721474 Bacteria 10456478
217 2954736814 2954731030 Bacteria 10243860
218 2954743937 2954740390 Bacteria 10229294
219 2954755662 2954749733 Bacteria 10366972
220 2954762878 2954759201 Bacteria 9358192
221 2966601518 2966598605 Bacteria 7676064
222 2990062243 2990059506 Bacteria 9321252
223 3006393688 3006393351 Bacteria 6615579
224 3006494667 3006493962 Bacteria 8825450
225 8008566475 8008558824 Bacteria 10610750
226 8008577865 8008574985 Bacteria 7815457
227 8023625992 8023623736 Bacteria 8593882
228 8025413766 8025413630 Bacteria 7014048
229 8025532392 8025530807 Bacteria 8495698
230 8048407423 8048406513 Bacteria 8936924
231 8054160743 8054160619 Bacteria 7783213
232 8056837706 8056829672 Bacteria 9045328
233 Ga0495620_0008484
234 rootH1_10005985
235 rootH2_10004699
236 Ga0006562J51391_1071470
237 Ga0006562J51391_1071471
238 Ga0006562J51391_1072885
239 Ga0105251_10044508
240 Ga0105250_10063210
241 Ga0105245_10222029
242 Ga0105248_10150834
243 Ga0105246_10000209
244 Ga0157372_10089271
245 Ga0183367_1002
246 Ga0307517_10002248
247 Ga0307515_10012023
248 Ga0307515_10204195
249 Ga0307511_10012022
250 Ga0307511_10035763
251 Ga0307512_10087641
252 Ga0307513_10018570
253 Ga0307509_10029871
254 Ga0307509_10032048
255 Ga0307508_10010063
256 Ga0307508_10038901
257 Ga0307514_10004492
258 Ga0307514_10072454
259 Ga0307516_10003147
260 Ga0307516_10021994
261 Ga0307518_10040779
262 Ga0307507_10012017
263 Ga0307507_10041799
264 Ga0307510_10023251
265 Ga0307510_10050553
266 Ga0307510_10109303
267 Ga0395898_0003554
268 Ga0439436_0000287
269 Ga0439436_0011696
270 Ga0439439_0000731
271 Ga0451853_0165357
272 Ga0451853_3027886
273 Ga0439449_0000253
274 Ga0439455_0014731
275 Ga0439457_005364
276 Ga0439457_005682
277 Ga0439462_0004777
278 Ga0450903_000334
279 Ga0450906_005004
280 Ga0466969_0087411
281 Ga0466972_0005313
282 Ga0466972_0045392
283 Ga0466965_0003339
284 Ga0466965_0048630
285 Ga0466966_0002647
286 Ga0466966_0011582
287 Ga0466961_0001908
288 Ga0466961_0012275
289 Ga0466963_0001809
290 Ga0466963_0007834
291 Ga0466963_0087945
292 Ga0466971_0000156
293 Ga0466968_0019198
294 Ga0466970_0011719
295 Ga0466957_0000352
296 Ga0466957_0031433
297 Ga0466960_0037671
298 Ga0466959_0009389
299 Ga0466958_0000270
300 Ga0466967_0011425
301 Ga0466967_0039510
302 Ga0495592_0020380
303 Ga0495603_0001519
304 Ga0495603_0002726
305 Ga0495603_0010660
306 Ga0495629_0001213
307 Ga0495629_0010956
308 Ga0495629_0020665
309 Ga0495629_0021365
310 Ga0495651_0031257
311 Ga0495605_0011469
312 Ga0495639_0017856
313 Ga0495662_0000039
314 Ga0495662_0015493
315 Ga0495664_0002481
316 Ga0495594_0026481
317 Ga0495594_0039557
318 Ga0495594_0133861
319 Ga0495606_0034152
320 Ga0495616_0009102
321 Ga0495620_0016788
322 Ga0495628_0042057
323 Ga0495631_0010123
324 Ga0495637_0032674
325 Ga0495652_0024586
326 Ga0495640_0004219
327 Ga0495640_0055550
328 Ga0495587_0000639
329 Ga0495622_0048747
330 Ga0495622_0053384
331 Ga0495622_0056962
332 Ga0495667_0041739
333 Ga0495634_0004476
334 Ga0495634_0100012
335 Ga0495625_0069314
336 Ga0495625_0098911
337 Ga0495635_0003345
338 Ga0495635_0029707
339 Ga0495588_0006184
340 Ga0495588_0018391
341 Ga0495588_0042725
342 Ga0495657_0003099
343 Ga0495657_0004291
344 Ga0495646_0020895
345 Ga0495613_0032687
346 Ga0495613_0062526
347 Ga0495589_0074306
348 Ga0495600_0006461
349 Ga0495581_0019380
350 Ga0495581_0073804
351 Ga0495581_0120199
352 Ga0495636_0025783
353 Ga0495676_0016538
354 Ga0495676_0020924
355 Ga0495676_0054601
356 Ga0495680_0076854
357 Ga0495683_0017923
358 Ga0495687_002461
359 Ga0495687_004954
360 Ga0495675_0034163
361 Ga0495685_001218
362 Ga0495685_003964
363 Ga0495681_0004415
364 Ga0495593_0006124
365 Ga0495593_0070616
366 Ga0495602_0137230
367 Ga0495614_0002658
368 Ga0495614_0094398
369 Ga0495626_0064755
370 Ga0496109_0019648
371 Ga0501033_0098667
372 Ga0501034_0035406
373 Ga0501034_0176495
374 Ga0501036_0000337
375 Ga0501036_0090381
376 Ga0501036_0106887
377 Ga0501037_0004712
378 Ga0501038_0016572
379 Ga0501038_0046983
380 Ga0501038_0184533
381 Ga0501042_0011589
382 Ga0501043_0010693
383 Ga0501043_0018819
384 Ga0501043_0067272
385 Ga0501046_0024152
386 Ga0501047_0011406
387 Ga0501047_0173704
388 Ga0501047_0248133
389 Ga0501070_0002684
390 Ga0501074_0003468
391 Ga0501080_0080497
392 Ga0501035_0002183
393 Ga0501035_0034661
394 Ga0501035_0063959
395 Ga0501044_0050625
396 Ga0501044_0064727
397 Ga0501044_0229074
398 Ga0500640_007463
399 Ga0500560_004287
400 Ga0466962_0004201
401 Ga0466962_0011792
402 2554256865
403 2585308150
404 2585319536
405 2616696858
406 2616901993
407 2643902853
408 2643942050
409 2644261655
410 2644389698
411 2644404637
412 2644429133
413 2784589659
414 2785341937
415 2785370715
416 2786671900
417 2808843263
418 2808912847
419 2809233333
420 2812356776
421 2812479496
422 2819695285
423 2852640396
424 2862185396
425 2862286793
426 2862292171
427 2862383779
428 2862516846
429 2862578250
430 2863411624
431 2873154753
432 2875395967
433 2877679871
434 2912718529
435 2912730857
436 2912762060
437 2918505753
438 2919475984
439 2946048645
440 2946069097
441 2947227841
442 2954003059
443 2954384825
444 2954678174
445 2954695636
446 2954710829
447 2954715062
448 2954725004
449 2954736814
450 2954743937
451 2954755662
452 2954762878
453 2966601518
454 2990062243
455 3006393688
456 3006494667
457 8008566475
458 8008577865
459 8023625992
460 8025413766
461 8025532392
462 8048407423
463 8054160743
464 8056837706

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07730

HisKA_3

Histidine kinase

243

310

0.97

PF13796

Sensor

Putative sensor

55

220

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ehf-assembly2.cif.gz_C crystal structure of deskc in complex with amp-pcp 0.8631 257 308
3ehf-assembly2.cif.gz_C crystal structure of deskc in complex with amp-pcp 0.786 257 308
3zxo-assembly1.cif.gz_A crystal structure of the mutant atp-binding domain of mycobacterium tuberculosis doss 0.7739 322 422
3ehg-assembly1.cif.gz_A crystal structure of the atp-binding domain of desk in complex with atp 0.7522 321 421
8sbm-assembly1.cif.gz_A crystal structure of the wild-type catalytic atp-binding domain of mtb doss 0.7239 322 396
ID Description Score Start End Superfamily
3ehfC00 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces; 0.8634 257 311 1.20.5.1930
3ehhB01 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces; 0.861 244 309 1.20.5.1930
3ehfC00 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces; 0.8373 257 311 1.20.5.1930
af_P0AFA2_454_587_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.8241 317 399 3.30.565.10
3ehhB01 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces; 0.8156 244 309 1.20.5.1930
ID Description Score Start End GO Terms
AF-W7IEN9-F1-model_v4 Putative two-component system sensor kinase 0.8954 32 228 GO:0016020
GO:0016301
AF-W7IEN9-F1-model_v4 Putative two-component system sensor kinase 0.8693 32 228 GO:0016020
GO:0016301
AF-A0A350WPF5-F1-model_v4 Putative sensor domain-containing protein 0.8548 27 225 GO:0016020
AF-U1P8P8-F1-model_v4 Putative sensor domain-containing protein 0.8344 11 227 GO:0016020
AF-A0A350WPF5-F1-model_v4 Putative sensor domain-containing protein 0.8306 27 225 GO:0016020

Map