F344981

General Info

Members Datasets Scaffolds Average Seq Length
232 152 232 285

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10006762|Ga0111539_100067623
Length 306
Sequence MRIAVVGARGQLAAAVAHECAPAHEIVALAHADLDVTDDAAVAAAMDRIRPDLIVNGAAFNDVDAAEDRPVDALNLNAFAVRALARAAQALGATLVHYSTDFVFDGRATQPYSESDRPSPRSVYAASKLVGEWFALEAPRGYVLRVESLFGRAPGGGPEKGSVASILKTLAAGGSPKVFEDRTISPTYIPDAARATRRLVETNAPPGLYHCVNSGRCTWFELAQEAVRLLGQPEWEARLVPVLMSEMPLKAARPQFCALANDKLRAAGVDMPSWREAMAEYVAQIKRSSSGAEQARPPQTSESRGS

Samples

Sample ID Description Type Environment
1 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
30 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
50 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
57 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
68 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
69 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
98 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
99 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
100 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
101 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
102 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
103 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
104 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
105 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
106 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
107 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
108 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
109 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
110 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
111 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
112 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
113 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
114 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
115 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
116 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
117 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
118 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
119 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
120 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
121 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
122 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
123 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
124 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
125 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
126 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
127 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
128 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
129 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
130 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
131 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
132 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
133 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
134 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
135 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
136 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
137 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
138 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
139 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
140 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
141 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
142 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
143 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
144 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
145 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
146 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
147 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
148 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
149 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
150 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
151 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
152 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 6.9
Rhizosphere 93.1
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070676_10040190 3300005328 Bacteria 2708
2 Ga0070683_100107031 3300005329 Bacteria 2637
3 Ga0070690_100092344 3300005330 Bacteria 1996
4 Ga0070690_100341671 3300005330 Unclassified 1084
5 Ga0070670_100327696 3300005331 Bacteria 1342
6 Ga0068869_100185201 3300005334 Bacteria 1634
7 Ga0070666_10097954 3300005335 Bacteria 2019
8 Ga0068868_100016283 3300005338 Bacteria 5517
9 Ga0068868_100227353 3300005338 Bacteria 1564
10 Ga0070687_100008857 3300005343 Bacteria 4280
11 Ga0070687_100025000 3300005343 Bacteria 2860
12 Ga0070669_100077420 3300005353 Bacteria 2471
13 Ga0070669_100079026 3300005353 Bacteria 2446
14 Ga0070675_100000845 3300005354 Bacteria 21754
15 Ga0070675_100133974 3300005354 Bacteria 2113
16 Ga0070673_100087466 3300005364 Bacteria 2540
17 Ga0070688_100041547 3300005365 Bacteria 2824
18 Ga0070688_100300614 3300005365 Bacteria 1160
19 Ga0070709_10058061 3300005434 Bacteria 2453
20 Ga0070709_10203684 3300005434 Bacteria 1403
21 Ga0070713_100015670 3300005436 Bacteria 5678
22 Ga0070701_10054623 3300005438 Bacteria 2083
23 Ga0070711_100257248 3300005439 Unclassified 1372
24 Ga0070705_100002860 3300005440 Bacteria 8577
25 Ga0070705_100099439 3300005440 Bacteria 1833
26 Ga0070700_100014838 3300005441 Bacteria 4404
27 Ga0070694_100072526 3300005444 Bacteria 2376
28 Ga0068867_100031484 3300005459 Bacteria 3830
29 Ga0070706_100220083 3300005467 Bacteria 1772
30 Ga0070707_100008704 3300005468 Bacteria 9412
31 Ga0070707_100274795 3300005468 Bacteria 1638
32 Ga0070698_100029532 3300005471 Bacteria 5692
33 Ga0070698_100101349 3300005471 Bacteria 2851
34 Ga0070699_100057355 3300005518 Bacteria 3373
35 Ga0070699_100135358 3300005518 Bacteria 2174
36 Ga0070684_100274899 3300005535 Unclassified 1543
37 Ga0070697_100088505 3300005536 Bacteria 2557
38 Ga0070697_100269350 3300005536 Unclassified 1460
39 Ga0070697_100289457 3300005536 Bacteria 1407
40 Ga0068853_100272020 3300005539 Bacteria 1560
41 Ga0070686_100008203 3300005544 Bacteria 5847
42 Ga0070686_100391351 3300005544 Bacteria 1055
43 Ga0070695_100010118 3300005545 Bacteria 5622
44 Ga0070695_100010150 3300005545 Bacteria 5615
45 Ga0070695_100152520 3300005545 Bacteria 1614
46 Ga0070696_100010698 3300005546 Bacteria 6146
47 Ga0070665_100002710 3300005548 Bacteria 19212
48 Ga0070704_100091293 3300005549 Bacteria 2271
49 Ga0070704_100178345 3300005549 Bacteria 1697
50 Ga0068854_100005882 3300005578 Bacteria 7771
51 Ga0068854_100240443 3300005578 Bacteria 1442
52 Ga0068852_100058859 3300005616 Bacteria 3330
53 Ga0068859_100325030 3300005617 Bacteria 1632
54 Ga0068864_100061838 3300005618 Bacteria 3243
55 Ga0068861_100265342 3300005719 Bacteria 1472
56 Ga0068861_100277469 3300005719 Bacteria 1442
57 Ga0068861_100540461 3300005719 Bacteria 1060
58 Ga0068851_10050796 3300005834 Bacteria 2106
59 Ga0068863_100266622 3300005841 Bacteria 1657
60 Ga0068858_100007939 3300005842 Bacteria 10226
61 Ga0068858_100041570 3300005842 Bacteria 4262
62 Ga0068858_100115261 3300005842 Bacteria 2510
63 Ga0068860_100413583 3300005843 Bacteria 1336
64 Ga0068862_100022368 3300005844 Bacteria 5290
65 Ga0068862_100080336 3300005844 Bacteria 2827
66 Ga0068862_100333835 3300005844 Bacteria 1402
67 Ga0081539_10065789 3300005985 Bacteria 1967
68 Ga0097621_100026245 3300006237 Bacteria 4567
69 Ga0068871_100084722 3300006358 Bacteria 2630
70 Ga0068871_100281036 3300006358 Bacteria 1456
71 Ga0075428_100023062 3300006844 Bacteria 6887
72 Ga0075428_100194222 3300006844 Bacteria 2195
73 Ga0075431_100410217 3300006847 Unclassified 1355
74 Ga0075434_100021608 3300006871 Bacteria 6257
75 Ga0075434_100024791 3300006871 Bacteria 5864
76 Ga0075434_100563280 3300006871 Bacteria 1159
77 Ga0068865_100389944 3300006881 Bacteria 1138
78 Ga0068865_100484990 3300006881 Unclassified 1028
79 Ga0075436_100017650 3300006914 Bacteria 4885
80 Ga0075436_100156893 3300006914 Bacteria 1603
81 Ga0097620_100271013 3300006931 Bacteria 1790
82 Ga0097620_100325015 3300006931 Bacteria 1632
83 Ga0075435_100000462 3300007076 Bacteria 24787
84 Ga0075435_100002556 3300007076 Bacteria 12126
85 Ga0105240_10197977 3300009093 Bacteria 2357
86 Ga0105240_10651168 3300009093 Unclassified 1155
87 Ga0111539_10006762 3300009094 Bacteria 14754
88 Ga0111539_10265312 3300009094 Bacteria 1999
89 Ga0105245_10207264 3300009098 Bacteria 1885
90 Ga0105245_10523666 3300009098 Unclassified 1204
91 Ga0105247_10034095 3300009101 Bacteria 3100
92 Ga0114129_10022245 3300009147 Bacteria 9001
93 Ga0114129_10027256 3300009147 Bacteria 8089
94 Ga0114129_10027952 3300009147 Bacteria 7986
95 Ga0114129_10029587 3300009147 Bacteria 7756
96 Ga0114129_10046520 3300009147 Bacteria 6098
97 Ga0114129_10054802 3300009147 Bacteria 5589
98 Ga0114129_10197384 3300009147 Bacteria 2728
99 Ga0114129_10279066 3300009147 Unclassified 2233
100 Ga0105242_10016707 3300009176 Bacteria 5709
101 Ga0105242_10044957 3300009176 Bacteria 3577
102 Ga0105248_10007467 3300009177 Bacteria 11995
103 Ga0105248_10014798 3300009177 Bacteria 8592
104 Ga0105248_10021316 3300009177 Bacteria 7181
105 Ga0105248_10381485 3300009177 Bacteria 1587
106 Ga0105237_10503093 3300009545 Bacteria 1218
107 Ga0105249_10174751 3300009553 Bacteria 2085
108 Ga0105239_10334886 3300010375 Bacteria 1708
109 Ga0157369_10254750 3300013105 Bacteria 1831
110 Ga0157374_10057266 3300013296 Bacteria 3640
111 Ga0163162_10263014 3300013306 Unclassified 1857
112 Ga0163163_10016225 3300014325 Bacteria 6915
113 Ga0163163_10800588 3300014325 Bacteria 1006
114 Ga0157379_10085051 3300014968 Bacteria 2834
115 Ga0157379_10225684 3300014968 Bacteria 1698
116 Ga0157376_10005587 3300014969 Bacteria 8798
117 Ga0207680_10182192 3300025903 Bacteria 1421
118 Ga0207699_10150393 3300025906 Bacteria 1540
119 Ga0207699_10166641 3300025906 Unclassified 1471
120 Ga0207645_10001243 3300025907 Bacteria 20957
121 Ga0207684_10189846 3300025910 Bacteria 1772
122 Ga0207695_10131417 3300025913 Bacteria 2461
123 Ga0207662_10026628 3300025918 Bacteria 3336
124 Ga0207646_10021294 3300025922 Bacteria 5992
125 Ga0207681_10010439 3300025923 Bacteria 5683
126 Ga0207650_10281852 3300025925 Bacteria 1353
127 Ga0207659_10000106 3300025926 Bacteria 49900
128 Ga0207659_10031036 3300025926 Bacteria 3655
129 Ga0207700_10289372 3300025928 Bacteria 1412
130 Ga0207686_10060998 3300025934 Bacteria 2389
131 Ga0207711_10039142 3300025941 Bacteria 4033
132 Ga0207711_10087553 3300025941 Bacteria 2732
133 Ga0207651_10254799 3300025960 Bacteria 1438
134 Ga0207651_10383084 3300025960 Bacteria 1192
135 Ga0207668_10171998 3300025972 Bacteria 1700
136 Ga0207640_10035493 3300025981 Bacteria 3121
137 Ga0207640_10250747 3300025981 Bacteria 1374
138 Ga0207658_10305725 3300025986 Unclassified 1372
139 Ga0207703_10023338 3300026035 Bacteria 4858
140 Ga0207639_10084808 3300026041 Bacteria 2517
141 Ga0207708_10005925 3300026075 Bacteria 9042
142 Ga0207641_10236331 3300026088 Bacteria 1701
143 Ga0207648_10126753 3300026089 Bacteria 2246
144 Ga0207676_10002646 3300026095 Bacteria 12750
145 Ga0207676_10024746 3300026095 Bacteria 4446
146 Ga0207676_10298623 3300026095 Bacteria 1470
147 Ga0207676_10305698 3300026095 Bacteria 1454
148 Ga0207675_100083256 3300026118 Bacteria 3000
149 Ga0207675_100227599 3300026118 Bacteria 1798
150 Ga0207675_100336142 3300026118 Bacteria 1477
151 Ga0207428_10311033 3300027907 Bacteria 1165
152 Ga0268266_10004990 3300028379 Bacteria 12544
153 Ga0268265_10131837 3300028380 Bacteria 2078
154 Ga0268265_10321544 3300028380 Bacteria 1401
155 Ga0268264_10376034 3300028381 Bacteria 1359
156 Ga0265314_10086582 3300031711 Bacteria 2051
157 Ga0373958_0006416 3300034819 Bacteria 1832
158 Ga0373932_0002878 3300035112 Bacteria 4250
159 Ga0373936_0054311 3300035113 Bacteria 1625
160 Ga0373941_0071149 3300035115 Bacteria 1155
161 Ga0373943_0010812 3300035170 Bacteria 4097
162 Ga0373946_0044891 3300035171 Unclassified 1826
163 Ga0373942_0009111 3300035207 Bacteria 2319
164 Ga0373924_0003741 3300035410 Bacteria 5259
165 Ga0373924_0032577 3300035410 Bacteria 2100
166 Ga0373931_0006207 3300035691 Bacteria 5572
167 Ga0373935_0078906 3300035692 Bacteria 2136
168 Ga0373927_0088584 3300035695 Bacteria 2009
169 Ga0373933_0180490 3300035724 Bacteria 1346
170 Ga0373937_0092016 3300036401 Bacteria 2811
171 Ga0373925_0020926 3300037068 Bacteria 4767
172 Ga0451576_0008525 3300045051 Bacteria 12021
173 Ga0466967_0098123 3300045976 Bacteria 2675
174 Ga0495580_0120827 3300046472 Bacteria 1819
175 Ga0495608_0004212 3300046511 Bacteria 10310
176 Ga0495628_0188587 3300046516 Unclassified 1557
177 Ga0495630_0007416 3300046517 Bacteria 7837
178 Ga0495652_0013760 3300046529 Bacteria 7280
179 Ga0495640_0066328 3300046533 Bacteria 2435
180 Ga0495645_0116035 3300046543 Bacteria 1890
181 Ga0495667_0341207 3300046559 Unclassified 947
182 Ga0495634_0070921 3300046642 Unclassified 2296
183 Ga0495634_0126070 3300046642 Unclassified 1636
184 Ga0495613_0000186 3300046689 Bacteria 60855
185 Ga0495604_0278752 3300047317 Bacteria 1130
186 Ga0495674_0094551 3300047319 Unclassified 2549
187 Ga0495680_0252672 3300047322 Bacteria 1249
188 Ga0495684_0000099 3300047471 Bacteria 60765
189 Ga0496102_0078174 3300048905 Bacteria 3046
190 Ga0496102_0135355 3300048905 Bacteria 2309
191 Ga0496104_0009784 3300048907 Bacteria 8548
192 Ga0496105_0168034 3300048908 Unclassified 1799
193 Ga0496106_0187608 3300048909 Bacteria 1643
194 Ga0496107_0344784 3300048910 Bacteria 1108
195 Ga0496107_0349201 3300048910 Bacteria 1101
196 Ga0496108_0036088 3300048911 Bacteria 4111
197 Ga0496111_0023324 3300048914 Bacteria 4344
198 Ga0496112_0127719 3300048915 Bacteria 2513
199 Ga0496112_0248141 3300048915 Bacteria 1732
200 Ga0496112_0758805 3300048915 Bacteria 896
201 Ga0496113_0182338 3300048916 Unclassified 1664
202 Ga0496114_0222440 3300048917 Bacteria 1657
203 Ga0496114_0280772 3300048917 Bacteria 1468
204 Ga0496115_0013477 3300048918 Bacteria 6185
205 Ga0501069_0149537 3300049585 Bacteria 1342
206 Ga0501072_0480570 3300049588 Bacteria 983
207 Ga0501076_0248679 3300049592 Bacteria 1455
208 Ga0501079_0154942 3300049741 Bacteria 1786
209 nmdc:mga05p37_26195_c1 3300050507 Bacteria 7090
210 nmdc:mga05p37_33564_c1 3300050507 Bacteria 6286
211 nmdc:mga05p37_405914_c1 3300050507 Bacteria 1590
212 nmdc:mga05p37_87342_c2 3300050507 Unclassified 3395
213 nmdc:mga09592_475438_c1 3300050508 Bacteria 1077
214 nmdc:mga06r32_479973_c1 3300050510 Unclassified 1221
215 nmdc:mga08y16_14438_c1 3300050511 Bacteria 8308
216 nmdc:mga0n895_181935_c1 3300050512 Bacteria 2133
217 nmdc:mga0n895_520311_c1 3300050512 Unclassified 1197
218 nmdc:mga0n895_78_c1 3300050512 Bacteria 55918
219 nmdc:mga0n895_83440_c1 3300050512 Bacteria 3187
220 nmdc:mga0rr50_15740_c1 3300050513 Bacteria 5001
221 nmdc:mga0rr50_6_c1 3300050513 Bacteria 310626
222 nmdc:mga08x19_124863_c1 3300050514 Bacteria 1728
223 nmdc:mga08x19_260541_c1 3300050514 Unclassified 1199
224 nmdc:mga08x19_402_c1 3300050514 Bacteria 30381
225 nmdc:mga08x19_7837_c1 3300050514 Bacteria 6343
226 nmdc:mga0a205_116884_c1 3300050515 Bacteria 2565
227 nmdc:mga0a205_154041_c1 3300050515 Bacteria 2197
228 nmdc:mga0a205_154983_c1 3300050515 Bacteria 2189
229 nmdc:mga0a205_216858_c1 3300050515 Bacteria 1800
230 nmdc:mga0a205_53251_c1 3300050515 Bacteria 3906
231 Ga0495601_0127542 3300053077 Unclassified 1656
232 Ga0495619_0150661 3300053085 Bacteria 1604

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050507 nmdc:mga05p37_87342_c2 nmdc:mga05p37_87342_c2_103_822 238
2 3300050515 nmdc:mga0a205_216858_c1 nmdc:mga0a205_216858_c1_21_812 245
3 3300046559 Ga0495667_0341207 Ga0495667_0341207_32_796 254
4 3300035410 Ga0373924_0032577 Ga0373924_0032577_194_1051 262
5 3300046472 Ga0495580_0120827 Ga0495580_0120827_196_1053 262
6 3300046511 Ga0495608_0004212 Ga0495608_0004212_6323_7180 262
7 3300046516 Ga0495628_0188587 Ga0495628_0188587_119_976 262
8 3300046517 Ga0495630_0007416 Ga0495630_0007416_2411_3268 262
9 3300046529 Ga0495652_0013760 Ga0495652_0013760_3634_4491 262
10 3300046543 Ga0495645_0116035 Ga0495645_0116035_420_1277 262
11 3300046642 Ga0495634_0070921 Ga0495634_0070921_1147_2004 262
12 3300046689 Ga0495613_0000186 Ga0495613_0000186_44968_45825 262
13 3300047317 Ga0495604_0278752 Ga0495604_0278752_17_874 262
14 3300047319 Ga0495674_0094551 Ga0495674_0094551_161_1018 262
15 3300047471 Ga0495684_0000099 Ga0495684_0000099_29818_30675 262
16 3300053085 Ga0495619_0150661 Ga0495619_0150661_277_1134 262
17 3300048905 Ga0496102_0078174 Ga0496102_0078174_128_925 263
18 3300048915 Ga0496112_0248141 Ga0496112_0248141_462_1259 263
19 3300005985 Ga0081539_10065789 Ga0081539_100657892 267
20 3300045976 Ga0466967_0098123 Ga0466967_0098123_388_1275 268
21 3300005434 Ga0070709_10058061 Ga0070709_100580612 269
22 3300005436 Ga0070713_100015670 Ga0070713_1000156702 269
23 3300025906 Ga0207699_10150393 Ga0207699_101503931 269
24 3300025928 Ga0207700_10289372 Ga0207700_102893721 269
25 3300035171 Ga0373946_0044891 Ga0373946_0044891_231_1088 272
26 3300035113 Ga0373936_0054311 Ga0373936_0054311_533_1402 273
27 3300035170 Ga0373943_0010812 Ga0373943_0010812_2637_3506 273
28 3300035410 Ga0373924_0003741 Ga0373924_0003741_766_1635 273
29 3300035692 Ga0373935_0078906 Ga0373935_0078906_991_1860 273
30 3300035695 Ga0373927_0088584 Ga0373927_0088584_345_1214 273
31 3300035724 Ga0373933_0180490 Ga0373933_0180490_84_953 273
32 3300037068 Ga0373925_0020926 Ga0373925_0020926_2671_3540 273
33 3300005434 Ga0070709_10203684 Ga0070709_102036842 275
34 3300005439 Ga0070711_100257248 Ga0070711_1002572481 275
35 3300025906 Ga0207699_10166641 Ga0207699_101666412 275
36 3300048915 Ga0496112_0758805 Ga0496112_0758805_21_851 276
37 3300005330 Ga0070690_100092344 Ga0070690_1000923442 277
38 3300005467 Ga0070706_100220083 Ga0070706_1002200832 277
39 3300025910 Ga0207684_10189846 Ga0207684_101898462 277
40 3300049588 Ga0501072_0480570 Ga0501072_0480570_118_963 277
41 3300050514 nmdc:mga08x19_124863_c1 nmdc:mga08x19_124863_c1_262_1146 277
42 3300005353 Ga0070669_100077420 Ga0070669_1000774202 278
43 3300005544 Ga0070686_100391351 Ga0070686_1003913511 278
44 3300005844 Ga0068862_100022368 Ga0068862_1000223686 278
45 3300025923 Ga0207681_10010439 Ga0207681_100104394 278
46 3300050511 nmdc:mga08y16_14438_c1 nmdc:mga08y16_14438_c1_7298_8170 278
47 3300050515 nmdc:mga0a205_116884_c1 nmdc:mga0a205_116884_c1_143_985 278
48 3300005618 Ga0068864_100061838 Ga0068864_1000618382 279
49 3300005841 Ga0068863_100266622 Ga0068863_1002666222 279
50 3300005842 Ga0068858_100041570 Ga0068858_1000415702 279
51 3300009101 Ga0105247_10034095 Ga0105247_100340951 279
52 3300009176 Ga0105242_10016707 Ga0105242_100167073 279
53 3300009177 Ga0105248_10007467 Ga0105248_100074677 279
54 3300014325 Ga0163163_10016225 Ga0163163_100162254 279
55 3300025986 Ga0207658_10305725 Ga0207658_103057252 279
56 3300026035 Ga0207703_10023338 Ga0207703_100233384 279
57 3300026088 Ga0207641_10236331 Ga0207641_102363312 279
58 3300026095 Ga0207676_10002646 Ga0207676_100026465 279
59 3300026095 Ga0207676_10305698 Ga0207676_103056982 279
60 3300036401 Ga0373937_0092016 Ga0373937_0092016_1867_2706 279
61 3300046533 Ga0495640_0066328 Ga0495640_0066328_1216_2055 279
62 3300048907 Ga0496104_0009784 Ga0496104_0009784_5577_6416 279
63 3300048911 Ga0496108_0036088 Ga0496108_0036088_106_945 279
64 3300048914 Ga0496111_0023324 Ga0496111_0023324_2009_2848 279
65 3300048916 Ga0496113_0182338 Ga0496113_0182338_99_938 279
66 3300053077 Ga0495601_0127542 Ga0495601_0127542_27_866 279
67 3300048909 Ga0496106_0187608 Ga0496106_0187608_616_1506 280
68 3300049592 Ga0501076_0248679 Ga0501076_0248679_547_1410 280
69 3300005468 Ga0070707_100008704 Ga0070707_1000087043 281
70 3300005545 Ga0070695_100010150 Ga0070695_1000101502 281
71 3300005549 Ga0070704_100178345 Ga0070704_1001783452 281
72 3300006358 Ga0068871_100281036 Ga0068871_1002810362 281
73 3300009177 Ga0105248_10021316 Ga0105248_100213165 281
74 3300025922 Ga0207646_10021294 Ga0207646_100212943 281
75 3300025941 Ga0207711_10087553 Ga0207711_100875532 281
76 3300005329 Ga0070683_100107031 Ga0070683_1001070313 282
77 3300005365 Ga0070688_100300614 Ga0070688_1003006141 282
78 3300005518 Ga0070699_100135358 Ga0070699_1001353582 282
79 3300005535 Ga0070684_100274899 Ga0070684_1002748992 282
80 3300006844 Ga0075428_100194222 Ga0075428_1001942222 282
81 3300009093 Ga0105240_10651168 Ga0105240_106511682 282
82 3300025913 Ga0207695_10131417 Ga0207695_101314172 282
83 3300005365 Ga0070688_100041547 Ga0070688_1000415473 283
84 3300005616 Ga0068852_100058859 Ga0068852_1000588594 283
85 3300005617 Ga0068859_100325030 Ga0068859_1003250302 283
86 3300006847 Ga0075431_100410217 Ga0075431_1004102171 283
87 3300006931 Ga0097620_100325015 Ga0097620_1003250152 283
88 3300009094 Ga0111539_10265312 Ga0111539_102653122 283
89 3300009147 Ga0114129_10197384 Ga0114129_101973841 283
90 3300009147 Ga0114129_10279066 Ga0114129_102790662 283
91 3300013105 Ga0157369_10254750 Ga0157369_102547502 283
92 3300050508 nmdc:mga09592_475438_c1 nmdc:mga09592_475438_c1_215_1066 283
93 3300050510 nmdc:mga06r32_479973_c1 nmdc:mga06r32_479973_c1_78_986 283
94 3300005719 Ga0068861_100540461 Ga0068861_1005404612 284
95 3300035115 Ga0373941_0071149 Ga0373941_0071149_30_899 284
96 3300005331 Ga0070670_100327696 Ga0070670_1003276962 285
97 3300005343 Ga0070687_100025000 Ga0070687_1000250002 285
98 3300005536 Ga0070697_100269350 Ga0070697_1002693502 285
99 3300005719 Ga0068861_100277469 Ga0068861_1002774692 285
100 3300005842 Ga0068858_100115261 Ga0068858_1001152612 285
101 3300006871 Ga0075434_100024791 Ga0075434_1000247914 285
102 3300006914 Ga0075436_100017650 Ga0075436_1000176502 285
103 3300007076 Ga0075435_100000462 Ga0075435_1000004624 285
104 3300009147 Ga0114129_10027952 Ga0114129_100279523 285
105 3300009147 Ga0114129_10046520 Ga0114129_100465202 285
106 3300025925 Ga0207650_10281852 Ga0207650_102818522 285
107 3300025972 Ga0207668_10171998 Ga0207668_101719981 285
108 3300026095 Ga0207676_10024746 Ga0207676_100247463 285
109 3300026095 Ga0207676_10298623 Ga0207676_102986231 285
110 3300026118 Ga0207675_100083256 Ga0207675_1000832562 285
111 3300047322 Ga0495680_0252672 Ga0495680_0252672_159_1016 285
112 3300050507 nmdc:mga05p37_26195_c1 nmdc:mga05p37_26195_c1_1306_2175 285
113 3300050512 nmdc:mga0n895_78_c1 nmdc:mga0n895_78_c1_2673_3554 285
114 3300050512 nmdc:mga0n895_83440_c1 nmdc:mga0n895_83440_c1_783_1652 285
115 3300050513 nmdc:mga0rr50_6_c1 nmdc:mga0rr50_6_c1_55117_55998 285
116 3300050514 nmdc:mga08x19_402_c1 nmdc:mga08x19_402_c1_15167_16048 285
117 3300050515 nmdc:mga0a205_53251_c1 nmdc:mga0a205_53251_c1_2206_3066 285
118 3300005335 Ga0070666_10097954 Ga0070666_100979542 286
119 3300005338 Ga0068868_100016283 Ga0068868_1000162832 286
120 3300005338 Ga0068868_100227353 Ga0068868_1002273532 286
121 3300005354 Ga0070675_100000845 Ga0070675_10000084513 286
122 3300005440 Ga0070705_100099439 Ga0070705_1000994392 286
123 3300005468 Ga0070707_100274795 Ga0070707_1002747952 286
124 3300005471 Ga0070698_100029532 Ga0070698_1000295325 286
125 3300005471 Ga0070698_100101349 Ga0070698_1001013492 286
126 3300005518 Ga0070699_100057355 Ga0070699_1000573552 286
127 3300005536 Ga0070697_100088505 Ga0070697_1000885052 286
128 3300005536 Ga0070697_100289457 Ga0070697_1002894572 286
129 3300005545 Ga0070695_100152520 Ga0070695_1001525201 286
130 3300005548 Ga0070665_100002710 Ga0070665_1000027104 286
131 3300005834 Ga0068851_10050796 Ga0068851_100507962 286
132 3300005842 Ga0068858_100007939 Ga0068858_1000079398 286
133 3300006237 Ga0097621_100026245 Ga0097621_1000262454 286
134 3300006358 Ga0068871_100084722 Ga0068871_1000847222 286
135 3300006844 Ga0075428_100023062 Ga0075428_1000230622 286
136 3300006871 Ga0075434_100021608 Ga0075434_1000216087 286
137 3300006871 Ga0075434_100563280 Ga0075434_1005632802 286
138 3300006881 Ga0068865_100389944 Ga0068865_1003899442 286
139 3300006914 Ga0075436_100156893 Ga0075436_1001568931 286
140 3300006931 Ga0097620_100271013 Ga0097620_1002710132 286
141 3300007076 Ga0075435_100002556 Ga0075435_1000025568 286
142 3300009098 Ga0105245_10207264 Ga0105245_102072642 286
143 3300009147 Ga0114129_10022245 Ga0114129_100222454 286
144 3300009147 Ga0114129_10027256 Ga0114129_100272563 286
145 3300009147 Ga0114129_10029587 Ga0114129_100295873 286
146 3300009147 Ga0114129_10054802 Ga0114129_100548027 286
147 3300009176 Ga0105242_10044957 Ga0105242_100449573 286
148 3300009177 Ga0105248_10014798 Ga0105248_100147987 286
149 3300009177 Ga0105248_10381485 Ga0105248_103814852 286
150 3300009545 Ga0105237_10503093 Ga0105237_105030932 286
151 3300009553 Ga0105249_10174751 Ga0105249_101747512 286
152 3300010375 Ga0105239_10334886 Ga0105239_103348862 286
153 3300013296 Ga0157374_10057266 Ga0157374_100572662 286
154 3300013306 Ga0163162_10263014 Ga0163162_102630142 286
155 3300014325 Ga0163163_10800588 Ga0163163_108005882 286
156 3300014968 Ga0157379_10085051 Ga0157379_100850513 286
157 3300014968 Ga0157379_10225684 Ga0157379_102256842 286
158 3300014969 Ga0157376_10005587 Ga0157376_100055873 286
159 3300025926 Ga0207659_10000106 Ga0207659_1000010641 286
160 3300025934 Ga0207686_10060998 Ga0207686_100609982 286
161 3300025941 Ga0207711_10039142 Ga0207711_100391423 286
162 3300028379 Ga0268266_10004990 Ga0268266_1000499011 286
163 3300031711 Ga0265314_10086582 Ga0265314_100865822 286
164 3300046642 Ga0495634_0126070 Ga0495634_0126070_350_1231 286
165 3300048908 Ga0496105_0168034 Ga0496105_0168034_818_1702 286
166 3300048910 Ga0496107_0344784 Ga0496107_0344784_68_952 286
167 3300048917 Ga0496114_0222440 Ga0496114_0222440_191_1075 286
168 3300048917 Ga0496114_0280772 Ga0496114_0280772_160_1041 286
169 3300048918 Ga0496115_0013477 Ga0496115_0013477_5176_6060 286
170 3300049741 Ga0501079_0154942 Ga0501079_0154942_371_1246 286
171 3300050507 nmdc:mga05p37_33564_c1 nmdc:mga05p37_33564_c1_2619_3491 286
172 3300050507 nmdc:mga05p37_405914_c1 nmdc:mga05p37_405914_c1_153_1067 286
173 3300050512 nmdc:mga0n895_181935_c1 nmdc:mga0n895_181935_c1_684_1586 286
174 3300050512 nmdc:mga0n895_520311_c1 nmdc:mga0n895_520311_c1_308_1174 286
175 3300050513 nmdc:mga0rr50_15740_c1 nmdc:mga0rr50_15740_c1_700_1569 286
176 3300050514 nmdc:mga08x19_260541_c1 nmdc:mga08x19_260541_c1_197_1066 286
177 3300050514 nmdc:mga08x19_7837_c1 nmdc:mga08x19_7837_c1_2959_3819 286
178 3300050515 nmdc:mga0a205_154041_c1 nmdc:mga0a205_154041_c1_182_1057 286
179 3300050515 nmdc:mga0a205_154983_c1 nmdc:mga0a205_154983_c1_247_1128 286
180 3300005578 Ga0068854_100240443 Ga0068854_1002404432 287
181 3300005719 Ga0068861_100265342 Ga0068861_1002653422 287
182 3300009093 Ga0105240_10197977 Ga0105240_101979772 287
183 3300025981 Ga0207640_10250747 Ga0207640_102507471 287
184 3300026118 Ga0207675_100227599 Ga0207675_1002275992 287
185 3300034819 Ga0373958_0006416 Ga0373958_0006416_894_1757 287
186 3300045051 Ga0451576_0008525 Ga0451576_0008525_7805_8668 287
187 3300005343 Ga0070687_100008857 Ga0070687_1000088572 288
188 3300005539 Ga0068853_100272020 Ga0068853_1002720202 288
189 3300005544 Ga0070686_100008203 Ga0070686_1000082034 288
190 3300005578 Ga0068854_100005882 Ga0068854_1000058828 288
191 3300025903 Ga0207680_10182192 Ga0207680_101821922 288
192 3300025918 Ga0207662_10026628 Ga0207662_100266283 288
193 3300025981 Ga0207640_10035493 Ga0207640_100354933 288
194 3300026041 Ga0207639_10084808 Ga0207639_100848083 288
195 3300028381 Ga0268264_10376034 Ga0268264_103760342 288
196 3300048905 Ga0496102_0135355 Ga0496102_0135355_1015_1881 288
197 3300048910 Ga0496107_0349201 Ga0496107_0349201_146_1012 288
198 3300049585 Ga0501069_0149537 Ga0501069_0149537_228_1106 288
199 3300005328 Ga0070676_10040190 Ga0070676_100401903 289
200 3300005330 Ga0070690_100341671 Ga0070690_1003416711 289
201 3300005334 Ga0068869_100185201 Ga0068869_1001852012 289
202 3300005353 Ga0070669_100079026 Ga0070669_1000790262 289
203 3300005354 Ga0070675_100133974 Ga0070675_1001339741 289
204 3300005364 Ga0070673_100087466 Ga0070673_1000874662 289
205 3300005438 Ga0070701_10054623 Ga0070701_100546232 289
206 3300005440 Ga0070705_100002860 Ga0070705_1000028602 289
207 3300005441 Ga0070700_100014838 Ga0070700_1000148383 289
208 3300005444 Ga0070694_100072526 Ga0070694_1000725262 289
209 3300005459 Ga0068867_100031484 Ga0068867_1000314842 289
210 3300005545 Ga0070695_100010118 Ga0070695_1000101183 289
211 3300005546 Ga0070696_100010698 Ga0070696_1000106982 289
212 3300005549 Ga0070704_100091293 Ga0070704_1000912932 289
213 3300005843 Ga0068860_100413583 Ga0068860_1004135832 289
214 3300005844 Ga0068862_100080336 Ga0068862_1000803362 289
215 3300005844 Ga0068862_100333835 Ga0068862_1003338352 289
216 3300006881 Ga0068865_100484990 Ga0068865_1004849902 289
217 3300009094 Ga0111539_10006762 Ga0111539_100067623 289
218 3300009098 Ga0105245_10523666 Ga0105245_105236661 289
219 3300025907 Ga0207645_10001243 Ga0207645_100012437 289
220 3300025926 Ga0207659_10031036 Ga0207659_100310362 289
221 3300025960 Ga0207651_10254799 Ga0207651_102547992 289
222 3300025960 Ga0207651_10383084 Ga0207651_103830841 289
223 3300026075 Ga0207708_10005925 Ga0207708_100059253 289
224 3300026089 Ga0207648_10126753 Ga0207648_101267531 289
225 3300026118 Ga0207675_100336142 Ga0207675_1003361422 289
226 3300027907 Ga0207428_10311033 Ga0207428_103110332 289
227 3300028380 Ga0268265_10131837 Ga0268265_101318372 289
228 3300028380 Ga0268265_10321544 Ga0268265_103215442 289
229 3300035112 Ga0373932_0002878 Ga0373932_0002878_2183_3058 289
230 3300035207 Ga0373942_0009111 Ga0373942_0009111_396_1271 289
231 3300035691 Ga0373931_0006207 Ga0373931_0006207_3735_4610 289
232 3300048915 Ga0496112_0127719 Ga0496112_0127719_349_1239 289

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04321

RmlD_sub_bind

RmlD substrate binding domain

1

287

0.97

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

3

212

0.92

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

9

151

0.9

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

6

137

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
1vl0-assembly1.cif.gz_B crystal structure of a dtdp-4-dehydrorhamnose reductase, rfbd ortholog (ca_c2315) from clostridium acetobutylicum atcc 824 at 2.05 a resolution 0.9548 1 286
3sc6-assembly6.cif.gz_F 2.65 angstrom resolution crystal structure of dtdp-4-dehydrorhamnose reductase (rfbd) from bacillus anthracis str. ames in complex with nadp 0.9496 2 284
1vl0-assembly1.cif.gz_B crystal structure of a dtdp-4-dehydrorhamnose reductase, rfbd ortholog (ca_c2315) from clostridium acetobutylicum atcc 824 at 2.05 a resolution 0.9481 1 286
3sc6-assembly5.cif.gz_E 2.65 angstrom resolution crystal structure of dtdp-4-dehydrorhamnose reductase (rfbd) from bacillus anthracis str. ames in complex with nadp 0.9377 2 284
3sc6-assembly6.cif.gz_F 2.65 angstrom resolution crystal structure of dtdp-4-dehydrorhamnose reductase (rfbd) from bacillus anthracis str. ames in complex with nadp 0.9332 2 284
ID Description Score Start End Superfamily
1vl0B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9598 3 213 3.40.50.720
3sc6D01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9514 2 214 3.40.50.720
2ggsB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9157 1 215 3.40.50.720
4wpgA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9079 2 272 3.40.50.720
1kc0A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8927 1 289 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A357D7T4-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.9935 42 132 GO:0005829
GO:0008831
GO:0019305
GO:0045226
AF-A0A2V8J5Y6-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.9901 1 285 GO:0005829
GO:0008831
GO:0019305
GO:0045226
AF-A0A7C1TNK7-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.99 1 132 GO:0005829
GO:0008831
GO:0019305
GO:0045226
AF-A0A2V8J5Y6-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.983 1 285 GO:0005829
GO:0008831
GO:0019305
GO:0045226
AF-A0A3N5GNV8-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.9782 1 289 GO:0005829
GO:0008831
GO:0019305
GO:0045226

Feature Viewer

pLDDT pTM Quality
96.56 0.93 High
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Predicted Structure (AlphaFold2)

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