F344876

General Info

Members Datasets Scaffolds Average Seq Length
232 135 464 331

Family's Representative Sequence

Representative Sequence 3300005719|Ga0068861_100160923|Ga0068861_1001609232
Length 374
Sequence MLLVRIATRHPPDAMRHYRPLWFSLSHWSRPFTATFHPMAGAKKLVIGASGFLGSHVTRQLGDRGDDVRVLIRRTSSTKAIEDLDVEYHYGDIFDDAALRAAMAGCDDVFYCVVDTRAWLRDPAPLFRTNVEGLRHVLDAAVDADLKRFVFTSTIGTIGIPPDGRLATEDDRMNWADKGGGYIQSRVEAENLVLRCARERGLPAVALCVSNTYGPRDWQPTPHGGLLAATAAGKTPVYVKGAATEVVGIEDAATALLLAAEKGRNGERYIISERYMTIRELFETAADAGGAKRPRFGIPLWALHLLGRAGDVVGLVLRRDTRVTSTSARLAHILPPMDHGKAERELGWQPKPIHDSIRRAAQFYRENRRGGKNR

Samples

Sample ID Description Type Environment
1 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
11 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
12 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
13 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
14 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
17 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
18 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
19 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
20 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
21 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
26 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
35 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
36 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
37 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
38 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
56 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
57 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
58 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
59 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
60 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
61 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
62 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
63 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
64 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
65 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
66 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
67 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
68 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
69 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
70 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
71 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
72 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
73 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
74 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
75 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
76 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
77 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
78 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
79 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
80 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
81 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
82 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
83 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
84 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
85 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
86 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
87 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
88 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
89 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
90 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
91 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
92 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
93 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
94 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
95 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
96 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
97 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
98 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
99 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
100 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
101 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
102 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
103 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
104 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
105 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
106 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
107 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
108 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
109 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
110 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
111 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
112 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
113 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
114 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
115 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
116 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
117 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
118 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
119 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
120 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
121 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
122 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
123 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
124 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
125 2547132424 Nocardia nova SH22a Isolate Unclassified
126 2643221715 Mycobacterium sp. Root265 Isolate Unclassified
127 2738541264 Mycobacterium sp. OK889 Isolate Unclassified
128 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
129 2738541356 Mycobacterium sp. OK887 Isolate Unclassified
130 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
131 2842134933 Mycolicibacterium obuense SEMIA 442 Isolate Nodule
132 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
133 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
134 2929212328 Mycolicibacterium sp. R-73050 Hybrid assembly Isolate Unclassified
135 2939582691 Mycolicibacterium sp. 624 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.67
Metatranscriptomes 0
Isolates 7.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.26
Nodule 0.86
Rhizoplane 16.38
Rhizosphere 41.38
Stem 0
Stem Tuber 0
Unclassified 0.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068861_100160923 3300005719 Bacteria 1852
2 JGI24751J29686_10000705 3300002459 Bacteria 8153
3 Ga0055540_1000071 3300003792 Bacteria 117607
4 Ga0070670_100058906 3300005331 Bacteria 3297
5 Ga0070668_100039627 3300005347 Bacteria 3602
6 Ga0070668_100123988 3300005347 Bacteria 2068
7 Ga0070669_100098400 3300005353 Bacteria 2203
8 Ga0070667_100033255 3300005367 Bacteria 4308
9 Ga0070667_100033659 3300005367 Bacteria 4286
10 Ga0070667_100132310 3300005367 Bacteria 2178
11 Ga0070709_10056757 3300005434 Bacteria 2477
12 Ga0070665_100004535 3300005548 Bacteria 14551
13 Ga0068859_100053697 3300005617 Bacteria 4053
14 Ga0068864_100020250 3300005618 Bacteria 5564
15 Ga0068858_100113275 3300005842 Bacteria 2533
16 Ga0068860_100061756 3300005843 Bacteria 3560
17 Ga0068862_100125008 3300005844 Bacteria 2270
18 Ga0081455_10024200 3300005937 Bacteria 5631
19 Ga0075365_10017160 3300006038 Bacteria 4422
20 Ga0075363_100014162 3300006048 Bacteria 3888
21 Ga0075363_100034556 3300006048 Bacteria 2640
22 Ga0075364_10000472 3300006051 Bacteria 20463
23 Ga0075364_10001035 3300006051 Bacteria 14793
24 Ga0075364_10001126 3300006051 Bacteria 14276
25 Ga0075364_10059512 3300006051 Bacteria 2504
26 Ga0075362_10016870 3300006177 Bacteria 2999
27 Ga0075362_10090179 3300006177 Bacteria 1422
28 Ga0075369_10000324 3300006186 Bacteria 14241
29 Ga0075369_10002275 3300006186 Bacteria 6823
30 Ga0075369_10013473 3300006186 Bacteria 3248
31 Ga0075369_10019818 3300006186 Bacteria 2749
32 Ga0075369_10069513 3300006186 Bacteria 1548
33 Ga0075370_10002769 3300006353 Bacteria 8212
34 Ga0075428_100039187 3300006844 Bacteria 5214
35 Ga0075430_100036255 3300006846 Bacteria 4182
36 Ga0075430_100038073 3300006846 Bacteria 4076
37 Ga0075431_100031551 3300006847 Bacteria 5458
38 Ga0097620_100053697 3300006931 Bacteria 4053
39 Ga0105250_10039869 3300009092 Bacteria 1883
40 Ga0105250_10081487 3300009092 Bacteria 1312
41 Ga0111539_10282358 3300009094 Bacteria 1932
42 Ga0105245_10003640 3300009098 Bacteria 13755
43 Ga0105247_10068489 3300009101 Bacteria 2213
44 Ga0114129_10047526 3300009147 Bacteria 6029
45 Ga0105248_10045470 3300009177 Bacteria 4923
46 Ga0105249_10187974 3300009553 Bacteria 2014
47 Ga0105239_10016905 3300010375 Bacteria 8063
48 Ga0105239_10370618 3300010375 Bacteria 1618
49 Ga0105239_10532103 3300010375 Bacteria 1338
50 Ga0163162_10465081 3300013306 Bacteria 1396
51 Ga0163163_10308786 3300014325 Bacteria 1634
52 Ga0157380_10028903 3300014326 Bacteria 4233
53 Ga0163161_10203296 3300017792 Bacteria 1527
54 Ga0163161_10263581 3300017792 Bacteria 1346
55 Ga0209051_1000033 3300025303 Bacteria 380540
56 Ga0207696_1029140 3300025711 Bacteria 1688
57 Ga0207710_10032249 3300025900 Bacteria 2294
58 Ga0207680_10009387 3300025903 Bacteria 4851
59 Ga0207671_10023463 3300025914 Bacteria 4653
60 Ga0207681_10082183 3300025923 Bacteria 2276
61 Ga0207706_10310431 3300025933 Bacteria 1373
62 Ga0207711_10016079 3300025941 Bacteria 6209
63 Ga0207711_10026518 3300025941 Bacteria 4863
64 Ga0207661_10038467 3300025944 Bacteria 3750
65 Ga0207712_10001030 3300025961 Bacteria 19761
66 Ga0207668_10013660 3300025972 Bacteria 5009
67 Ga0207668_10133481 3300025972 Bacteria 1899
68 Ga0207658_10005516 3300025986 Bacteria 8670
69 Ga0207658_10014660 3300025986 Bacteria 5369
70 Ga0207658_10017787 3300025986 Bacteria 4897
71 Ga0207641_10004794 3300026088 Bacteria 11661
72 Ga0207641_10018510 3300026088 Bacteria 5711
73 Ga0207641_10029736 3300026088 Bacteria 4518
74 Ga0207675_100031959 3300026118 Bacteria 4904
75 Ga0207675_100038400 3300026118 Bacteria 4468
76 Ga0268266_10005255 3300028379 Bacteria 12161
77 Ga0268265_10001802 3300028380 Bacteria 17153
78 Ga0268264_10000127 3300028381 Bacteria 185112
79 Ga0265327_10002036 3300031251 Bacteria 22745
80 Ga0265327_10002212 3300031251 Bacteria 21240
81 Ga0307410_10092528 3300031852 Bacteria 2150
82 Ga0307416_100367159 3300032002 Bacteria 1464
83 Ga0316584_0011197 3300036712 Bacteria 6297
84 Ga0436364_0033137 3300037853 Bacteria 28951
85 Ga0436365_1780866 3300039437 Bacteria 6981
86 Ga0436363_1393753 3300039450 Bacteria 2138
87 Ga0439466_0022062 3300041411 Bacteria 2250
88 Ga0439466_0035120 3300041411 Bacteria 1696
89 Ga0439466_0039712 3300041411 Bacteria 1576
90 Ga0439465_0000043 3300041413 Bacteria 26101
91 Ga0439465_0001384 3300041413 Bacteria 7824
92 Ga0439431_0004244 3300041997 Bacteria 3146
93 Ga0439442_012872 3300042002 Bacteria 1713
94 Ga0439445_0004318 3300042004 Bacteria 3217
95 Ga0439434_0036753 3300042435 Bacteria 1499
96 Ga0466972_0010265 3300044658 Bacteria 4704
97 Ga0466965_0005403 3300044683 Bacteria 5757
98 Ga0466971_0067591 3300044719 Bacteria 1620
99 Ga0466971_0085112 3300044719 Bacteria 1444
100 Ga0466960_0000333 3300044901 Bacteria 16103
101 Ga0466958_0100857 3300045836 Bacteria 1795
102 Ga0466967_0165782 3300045976 Bacteria 2076
103 Ga0495638_0001056 3300046460 Bacteria 27089
104 Ga0495640_0139156 3300046533 Bacteria 1565
105 Ga0495672_0006953 3300047320 Bacteria 8610
106 Ga0495673_0000642 3300047469 Bacteria 34378
107 Ga0495686_0002560 3300047472 Bacteria 16969
108 Ga0495686_0155682 3300047472 Bacteria 1339
109 Ga0496100_0005163 3300048903 Bacteria 7004
110 Ga0496100_0117420 3300048903 Bacteria 1857
111 Ga0496101_0000033 3300048904 Bacteria 183191
112 Ga0496101_0001131 3300048904 Bacteria 15917
113 Ga0496101_0003396 3300048904 Bacteria 9934
114 Ga0496101_0132776 3300048904 Bacteria 1892
115 Ga0496102_0003819 3300048905 Bacteria 12738
116 Ga0496102_0011962 3300048905 Bacteria 7495
117 Ga0496102_0021380 3300048905 Bacteria 5722
118 Ga0496102_0034950 3300048905 Bacteria 4523
119 Ga0496102_0087721 3300048905 Bacteria 2875
120 Ga0496102_0308039 3300048905 Bacteria 1492
121 Ga0496103_0001959 3300048906 Bacteria 13316
122 Ga0496103_0002190 3300048906 Bacteria 12404
123 Ga0496103_0025598 3300048906 Bacteria 3567
124 Ga0496103_0069717 3300048906 Bacteria 2198
125 Ga0496104_0001250 3300048907 Bacteria 21900
126 Ga0496104_0005405 3300048907 Bacteria 11179
127 Ga0496104_0005773 3300048907 Bacteria 10834
128 Ga0496106_0008473 3300048909 Bacteria 7608
129 Ga0496106_0009643 3300048909 Bacteria 7129
130 Ga0496106_0025693 3300048909 Bacteria 4384
131 Ga0496107_0000831 3300048910 Bacteria 18014
132 Ga0496108_0002577 3300048911 Bacteria 14524
133 Ga0496108_0004908 3300048911 Bacteria 10803
134 Ga0496108_0048280 3300048911 Bacteria 3559
135 Ga0496108_0266512 3300048911 Bacteria 1491
136 Ga0496109_0028418 3300048912 Bacteria 5001
137 Ga0496109_0103553 3300048912 Bacteria 2642
138 Ga0496110_0035735 3300048913 Bacteria 4312
139 Ga0496110_0087694 3300048913 Bacteria 2779
140 Ga0496111_0009205 3300048914 Bacteria 6578
141 Ga0496112_0072533 3300048915 Bacteria 3404
142 Ga0496114_0000320 3300048917 Bacteria 35231
143 Ga0496114_0003358 3300048917 Bacteria 12293
144 Ga0496114_0361981 3300048917 Bacteria 1283
145 Ga0496115_0004926 3300048918 Bacteria 9699
146 Ga0496115_0026986 3300048918 Bacteria 4489
147 Ga0496116_0004228 3300048919 Bacteria 13795
148 Ga0496116_0016953 3300048919 Bacteria 5678
149 Ga0496117_0000804 3300048920 Bacteria 48765
150 Ga0496117_0006737 3300048920 Bacteria 11471
151 Ga0496117_0093615 3300048920 Bacteria 1926
152 Ga0496118_0000013 3300048921 Bacteria 574008
153 Ga0496118_0007183 3300048921 Bacteria 11910
154 Ga0496118_0031271 3300048921 Bacteria 4417
155 Ga0496118_0082879 3300048921 Bacteria 2244
156 Ga0496119_0004844 3300048922 Bacteria 13184
157 Ga0496119_0028391 3300048922 Bacteria 3817
158 Ga0496119_0046640 3300048922 Bacteria 2703
159 Ga0496120_0006837 3300048923 Bacteria 8635
160 Ga0496120_0054807 3300048923 Bacteria 2257
161 Ga0496120_0103360 3300048923 Bacteria 1501
162 Ga0496121_0000002 3300048924 Bacteria 1494588
163 Ga0496121_0000056 3300048924 Bacteria 296250
164 Ga0496121_0008307 3300048924 Bacteria 12276
165 Ga0496121_0022644 3300048924 Bacteria 6083
166 Ga0496122_0003454 3300048925 Bacteria 20778
167 Ga0496122_0009281 3300048925 Bacteria 10402
168 Ga0496123_0060206 3300048926 Bacteria 2449
169 Ga0496124_0000002 3300048927 Bacteria 1494588
170 Ga0496124_0001086 3300048927 Bacteria 42885
171 Ga0496124_0105340 3300048927 Bacteria 2278
172 Ga0496125_0005655 3300048928 Bacteria 13795
173 Ga0496125_0057372 3300048928 Bacteria 3153
174 Ga0496125_0059214 3300048928 Bacteria 3088
175 Ga0496126_0000011 3300048929 Bacteria 744275
176 Ga0496126_0016433 3300048929 Bacteria 7400
177 Ga0496126_0037455 3300048929 Bacteria 4525
178 Ga0496126_0175397 3300048929 Bacteria 1823
179 Ga0496126_0176654 3300048929 Unclassified 1816
180 Ga0501070_0090859 3300049586 Bacteria 2527
181 Ga0501073_0123042 3300049589 Bacteria 1798
182 nmdc:mga03683_91459_c1 3300050489 Bacteria 1327
183 nmdc:mga03683_98440_c1 3300050489 Bacteria 1283
184 nmdc:mga03n38_4250_c1 3300050490 Bacteria 4714
185 nmdc:mga03n38_43400_c1 3300050490 Bacteria 1970
186 nmdc:mga00v17_10652_c1 3300050491 Bacteria 5028
187 nmdc:mga00v17_119531_c1 3300050491 Bacteria 1677
188 nmdc:mga00v17_6094_c1 3300050491 Bacteria 6382
189 nmdc:mga00v17_6904_c1 3300050491 Bacteria 4226
190 nmdc:mga0yw44_181608_c1 3300050492 Bacteria 1385
191 nmdc:mga0yw44_220292_c1 3300050492 Bacteria 1257
192 nmdc:mga0yw44_39986_c1 3300050492 Bacteria 2783
193 nmdc:mga07m45_5921_c1 3300050496 Bacteria 3482
194 nmdc:mga07m45_78824_c1 3300050496 Bacteria 1880
195 nmdc:mga05p37_230447_c1 3300050507 Bacteria 2232
196 nmdc:mga0qj67_31025_c1 3300050509 Bacteria 4162
197 nmdc:mga06r32_225334_c1 3300050510 Bacteria 1863
198 nmdc:mga0sz30_25581_c1 3300050516 Bacteria 2414
199 nmdc:mga0sz30_310_c2 3300050516 Bacteria 14623
200 nmdc:mga0sz30_32307_c1 3300050516 Bacteria 2171
201 nmdc:mga0sz30_51720_c1 3300050516 Bacteria 1743
202 Ga0500635_0008190 3300053080 Bacteria 2857
203 Ga0500643_001380 3300053087 Bacteria 14057
204 Ga0500643_010176 3300053087 Bacteria 3527
205 Ga0500641_0072239 3300053096 Bacteria 1454
206 Ga0500556_0011714 3300053104 Bacteria 2602
207 Ga0500642_0045528 3300053130 Bacteria 1915
208 Ga0500652_000877 3300053131 Bacteria 9966
209 Ga0500559_0008149 3300053136 Bacteria 4609
210 Ga0500559_0062151 3300053136 Bacteria 1667
211 Ga0500616_0014734 3300053153 Bacteria 4485
212 Ga0500645_000054 3300053730 Bacteria 93914
213 Ga0500645_000057 3300053730 Bacteria 92092
214 Ga0500645_026474 3300053730 Bacteria 1764
215 Ga0466962_0066537 3300061719 Bacteria 1720
216 2548695854 2547132424 Bacteria 8348532
217 2644636013 2643221715 Bacteria 6671032
218 2738666571 2738541264 Bacteria 5935393
219 2738667388 2738541264 Bacteria 5935393
220 2738704036 2738541274 Bacteria 6909446
221 2738705514 2738541274 Bacteria 6909446
222 2739145415 2738541356 Bacteria 5935017
223 2739146231 2738541356 Bacteria 5935017
224 2739332303 2738543028 Bacteria 6917070
225 2739334410 2738543028 Bacteria 6917070
226 2842135713 2842134933 Bacteria 5847019
227 2842138923 2842134933 Bacteria 5847019
228 2902801876 2902799365 Bacteria 5419524
229 2902815528 2902810491 Bacteria 6794147
230 2929218651 2929212328 Bacteria 7708288
231 2939586486 2939582691 Bacteria 7088898
232 2939588759 2939582691 Bacteria 7088898
233 Ga0068861_100160923
234 JGI24751J29686_10000705
235 Ga0055540_1000071
236 Ga0070670_100058906
237 Ga0070668_100039627
238 Ga0070668_100123988
239 Ga0070669_100098400
240 Ga0070667_100033255
241 Ga0070667_100033659
242 Ga0070667_100132310
243 Ga0070709_10056757
244 Ga0070665_100004535
245 Ga0068859_100053697
246 Ga0068864_100020250
247 Ga0068858_100113275
248 Ga0068860_100061756
249 Ga0068862_100125008
250 Ga0081455_10024200
251 Ga0075365_10017160
252 Ga0075363_100014162
253 Ga0075363_100034556
254 Ga0075364_10000472
255 Ga0075364_10001035
256 Ga0075364_10001126
257 Ga0075364_10059512
258 Ga0075362_10016870
259 Ga0075362_10090179
260 Ga0075369_10000324
261 Ga0075369_10002275
262 Ga0075369_10013473
263 Ga0075369_10019818
264 Ga0075369_10069513
265 Ga0075370_10002769
266 Ga0075428_100039187
267 Ga0075430_100036255
268 Ga0075430_100038073
269 Ga0075431_100031551
270 Ga0097620_100053697
271 Ga0105250_10039869
272 Ga0105250_10081487
273 Ga0111539_10282358
274 Ga0105245_10003640
275 Ga0105247_10068489
276 Ga0114129_10047526
277 Ga0105248_10045470
278 Ga0105249_10187974
279 Ga0105239_10016905
280 Ga0105239_10370618
281 Ga0105239_10532103
282 Ga0163162_10465081
283 Ga0163163_10308786
284 Ga0157380_10028903
285 Ga0163161_10203296
286 Ga0163161_10263581
287 Ga0209051_1000033
288 Ga0207696_1029140
289 Ga0207710_10032249
290 Ga0207680_10009387
291 Ga0207671_10023463
292 Ga0207681_10082183
293 Ga0207706_10310431
294 Ga0207711_10016079
295 Ga0207711_10026518
296 Ga0207661_10038467
297 Ga0207712_10001030
298 Ga0207668_10013660
299 Ga0207668_10133481
300 Ga0207658_10005516
301 Ga0207658_10014660
302 Ga0207658_10017787
303 Ga0207641_10004794
304 Ga0207641_10018510
305 Ga0207641_10029736
306 Ga0207675_100031959
307 Ga0207675_100038400
308 Ga0268266_10005255
309 Ga0268265_10001802
310 Ga0268264_10000127
311 Ga0265327_10002036
312 Ga0265327_10002212
313 Ga0307410_10092528
314 Ga0307416_100367159
315 Ga0316584_0011197
316 Ga0436364_0033137
317 Ga0436365_1780866
318 Ga0436363_1393753
319 Ga0439466_0022062
320 Ga0439466_0035120
321 Ga0439466_0039712
322 Ga0439465_0000043
323 Ga0439465_0001384
324 Ga0439431_0004244
325 Ga0439442_012872
326 Ga0439445_0004318
327 Ga0439434_0036753
328 Ga0466972_0010265
329 Ga0466965_0005403
330 Ga0466971_0067591
331 Ga0466971_0085112
332 Ga0466960_0000333
333 Ga0466958_0100857
334 Ga0466967_0165782
335 Ga0495638_0001056
336 Ga0495640_0139156
337 Ga0495672_0006953
338 Ga0495673_0000642
339 Ga0495686_0002560
340 Ga0495686_0155682
341 Ga0496100_0005163
342 Ga0496100_0117420
343 Ga0496101_0000033
344 Ga0496101_0001131
345 Ga0496101_0003396
346 Ga0496101_0132776
347 Ga0496102_0003819
348 Ga0496102_0011962
349 Ga0496102_0021380
350 Ga0496102_0034950
351 Ga0496102_0087721
352 Ga0496102_0308039
353 Ga0496103_0001959
354 Ga0496103_0002190
355 Ga0496103_0025598
356 Ga0496103_0069717
357 Ga0496104_0001250
358 Ga0496104_0005405
359 Ga0496104_0005773
360 Ga0496106_0008473
361 Ga0496106_0009643
362 Ga0496106_0025693
363 Ga0496107_0000831
364 Ga0496108_0002577
365 Ga0496108_0004908
366 Ga0496108_0048280
367 Ga0496108_0266512
368 Ga0496109_0028418
369 Ga0496109_0103553
370 Ga0496110_0035735
371 Ga0496110_0087694
372 Ga0496111_0009205
373 Ga0496112_0072533
374 Ga0496114_0000320
375 Ga0496114_0003358
376 Ga0496114_0361981
377 Ga0496115_0004926
378 Ga0496115_0026986
379 Ga0496116_0004228
380 Ga0496116_0016953
381 Ga0496117_0000804
382 Ga0496117_0006737
383 Ga0496117_0093615
384 Ga0496118_0000013
385 Ga0496118_0007183
386 Ga0496118_0031271
387 Ga0496118_0082879
388 Ga0496119_0004844
389 Ga0496119_0028391
390 Ga0496119_0046640
391 Ga0496120_0006837
392 Ga0496120_0054807
393 Ga0496120_0103360
394 Ga0496121_0000002
395 Ga0496121_0000056
396 Ga0496121_0008307
397 Ga0496121_0022644
398 Ga0496122_0003454
399 Ga0496122_0009281
400 Ga0496123_0060206
401 Ga0496124_0000002
402 Ga0496124_0001086
403 Ga0496124_0105340
404 Ga0496125_0005655
405 Ga0496125_0057372
406 Ga0496125_0059214
407 Ga0496126_0000011
408 Ga0496126_0016433
409 Ga0496126_0037455
410 Ga0496126_0175397
411 Ga0496126_0176654
412 Ga0501070_0090859
413 Ga0501073_0123042
414 nmdc:mga03683_91459_c1
415 nmdc:mga03683_98440_c1
416 nmdc:mga03n38_4250_c1
417 nmdc:mga03n38_43400_c1
418 nmdc:mga00v17_10652_c1
419 nmdc:mga00v17_119531_c1
420 nmdc:mga00v17_6094_c1
421 nmdc:mga00v17_6904_c1
422 nmdc:mga0yw44_181608_c1
423 nmdc:mga0yw44_220292_c1
424 nmdc:mga0yw44_39986_c1
425 nmdc:mga07m45_5921_c1
426 nmdc:mga07m45_78824_c1
427 nmdc:mga05p37_230447_c1
428 nmdc:mga0qj67_31025_c1
429 nmdc:mga06r32_225334_c1
430 nmdc:mga0sz30_25581_c1
431 nmdc:mga0sz30_310_c2
432 nmdc:mga0sz30_32307_c1
433 nmdc:mga0sz30_51720_c1
434 Ga0500635_0008190
435 Ga0500643_001380
436 Ga0500643_010176
437 Ga0500641_0072239
438 Ga0500556_0011714
439 Ga0500642_0045528
440 Ga0500652_000877
441 Ga0500559_0008149
442 Ga0500559_0062151
443 Ga0500616_0014734
444 Ga0500645_000054
445 Ga0500645_000057
446 Ga0500645_026474
447 Ga0466962_0066537
448 2548695854
449 2644636013
450 2738666571
451 2738667388
452 2738704036
453 2738705514
454 2739145415
455 2739146231
456 2739332303
457 2739334410
458 2842135713
459 2842138923
460 2902801876
461 2902815528
462 2929218651
463 2939586486
464 2939588759

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05368

NmrA

NmrA-like family

45

159

0.9

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

44

272

0.88

PF07993

NAD_binding_4

Male sterility protein

103

240

0.86

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

45

276

0.81

PF13460

NAD_binding_10

NAD(P)H-binding

48

208

0.79

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

45

359

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
2x4g-assembly1.cif.gz_A-2 crystal structure of pa4631, a nucleoside-diphosphate-sugar epimerase from pseudomonas aeruginosa 0.8636 2 297
6jkg-assembly1.cif.gz_A the nad+-free form of human nsdhl 0.8505 18 139
3wj7-assembly1.cif.gz_C crystal structure of gox2253 0.8433 2 302
2q1w-assembly1.cif.gz_B crystal structure of the bordetella bronchiseptica enzyme wbmh in complex with nad+ 0.8422 20 295
6dnt-assembly1.cif.gz_A-2 udp-n-acetylglucosamine 4-epimerase from methanobrevibacter ruminantium m1 in complex with udp-n-acetylmuramic acid 0.8417 21 297
ID Description Score Start End Superfamily
af_P96816_2_332_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9733 2 298 3.40.50.720
af_P96816_2_332_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.942 2 298 3.40.50.720
af_Q94HG6_1_340_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8797 16 301 3.40.50.720
af_A0A0R4IYR2_3_342_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8638 19 294 3.40.50.720
2x4gA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8636 2 297 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A841P1H8-F1-model_v4 deleted 0.9861 3 295
AF-A0A3N2DPR5-F1-model_v4 Dihydroflavonol-4-reductase 0.9686 2 295 GO:0004029
GO:0005737
AF-X7XW23-F1-model_v4 deleted 0.9617 2 228
AF-A0A846WKF1-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9567 2 304 GO:0004029
GO:0005737
AF-A4T0Q3-F1-model_v4 NAD-dependent epimerase/dehydratase 0.9498 39 300 GO:0004029
GO:0005737

Map