F344816

General Info

Members Datasets Scaffolds Average Seq Length
232 144 464 1031

Family's Representative Sequence

Representative Sequence 3300005467|Ga0070706_100000053|Ga0070706_10000005335
Length 1102
Sequence MKNVFKFIALSALLTCFALFAGSAFAQTSTTGTIEGTVTDPNGAAVPGIAVKVTSPNLISPQTVVTDSSGRYKVLNLPPGKYTVTIEADKGFDKAEKGDIEVNLSRNSTADLQMKIAGTQATVTVTDTAGAAVDVSNNTAGSNVSSDQFSNFPTQRTVQGLYTIAPTVTRSGLRDATGRDRDPSVAGSSGPENNYILDGVNTTDPAFGGSGANLPFEFVQEVEIKTGAYGPEYGRSTGGIFNVITKSGGNEFHGDIFGYGTTKGLVREVKNFPFTGSAFNGFSETDIGGDIGGPIVKDKIWFFGAFNPQRRKNFYLTQTFHAPVENKVTIPFYAGKITWALNHKNTFTASTFGDFTKVEGFLASNILALQNVNGFGNDLRAFRGRQETGGHNYAFRLNSTITNTFIGEFSGGLHFQRANTIPEVIDQPLITDNFAVLKGGAVLTPVSTGVNANNLAICPSNPTPNANGFVDPRSQCVGTGFIDFVDGRGGSLQRNFVRGPGFGLFSTQDRNRYEFAAHMQNIVAGNHTVKWGFEWNSNRYKIDTRSSGPGVTYGFTPGNLNFSGSTGAVSALSNTNGNSNATDGARITNNWLVCAVVSNQITCPNTAGVVRAQAIPAATLAALGLTVNPAVTAITAAQAFGNPFIIRNTTRVRDFQLVGSTYTNVESFYAGDDWKFAKNFQLSFGLRWDYQQSYSNNGGTYLKFNNFDDNLAPRFGFIWDFTGKGRGKIFANYAQFIETPIPLDVNVRAGGGDVQTDKNFNVDRLNAPGGSLILPGVSTGATNLGSDATPADPGLKPQSIREFTFGAEYEVGGDVTLGTRGIYRAMVNVIEDGSFDDGDTYFIFNPGRLAPGTTEEAACAGDAATGRAPQCFGRAQRFYRGIEFTATKRFTNNFQFIASYVFSSLIGNYEGLFRNDNGQSDPNITSLFDLQSLLNNTYGRLPNDRPHQFKFNGSYRTPWKLLFSGNFYAQSGVPFNALIPHPIYGNNEGFLVQRGTAIVPAVQASAAGFPNVVESIGTNRTPTTMNLDLGVYYPIKVGEGKELRLTGDWFNVFNSQRAVTLDQTFQINSGVSGVPPVSNPFFGSALIVQAPSAFRFGAKFTF

Samples

Sample ID Description Type Environment
1 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300004798 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
4 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
19 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
46 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
62 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
63 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
64 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
65 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
95 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
98 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
99 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
100 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
101 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
102 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
103 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
104 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
105 3300038699 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot26 Metagenome Rhizosphere
106 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
107 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
108 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
109 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
110 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
111 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
112 3300049128 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
113 3300049129 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_B_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
114 3300049130 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
115 3300049132 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
116 3300049160 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
117 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
118 3300049162 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
119 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
120 3300049527 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
121 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
122 3300049529 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
123 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
124 3300049537 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B12_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
125 3300049538 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
126 3300049539 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
127 3300049540 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
128 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
129 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
130 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
131 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
132 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
133 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
134 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
135 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
136 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
137 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
138 3300059511 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 56R_CD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
139 3300059624 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 146R_CW_T3_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
140 3300059639 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 3R_CW_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
141 3300059641 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 9R_AW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
142 3300059645 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 18R_SW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
143 3300059647 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 43R_SW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
144 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.07
Metatranscriptomes 12.93
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.43
Rhizosphere 96.12
Stem 0
Stem Tuber 0
Unclassified 7.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070706_100000053 3300005467 Bacteria 139565
2 JGI24751J29686_10000003 3300002459 Bacteria 157815
3 Ga0058859_10022886 3300004798 Unclassified 3255
4 Ga0058860_11759988 3300004801 Bacteria 3327
5 Ga0065715_10007005 3300005293 Bacteria 4926
6 Ga0065715_10013077 3300005293 Bacteria 3547
7 Ga0065715_10093716 3300005293 Bacteria 4587
8 Ga0070690_100002348 3300005330 Bacteria 10174
9 Ga0070670_100000167 3300005331 Bacteria 59452
10 Ga0070670_100044561 3300005331 Bacteria 3814
11 Ga0068869_100001221 3300005334 Bacteria 15128
12 Ga0070680_100018971 3300005336 Bacteria 5443
13 Ga0070682_100000091 3300005337 Bacteria 82460
14 Ga0070682_100004170 3300005337 Bacteria 8015
15 Ga0068868_100004192 3300005338 Bacteria 10079
16 Ga0070689_100001142 3300005340 Bacteria 16765
17 Ga0070689_100011982 3300005340 Bacteria 6230
18 Ga0070668_100002437 3300005347 Bacteria 13685
19 Ga0070675_100034965 3300005354 Bacteria 4080
20 Ga0070675_100038674 3300005354 Bacteria 3889
21 Ga0070671_100004745 3300005355 Bacteria 10801
22 Ga0070671_100042246 3300005355 Bacteria 3790
23 Ga0070674_100018689 3300005356 Bacteria 4389
24 Ga0070659_100000353 3300005366 Bacteria 35063
25 Ga0070703_10000085 3300005406 Bacteria 47113
26 Ga0070701_10010371 3300005438 Unclassified 4118
27 Ga0070694_100001664 3300005444 Bacteria 13064
28 Ga0070694_100003343 3300005444 Bacteria 9598
29 Ga0070694_100006644 3300005444 Archaea 7027
30 Ga0070708_100000200 3300005445 Bacteria 43782
31 Ga0070708_100002463 3300005445 Bacteria 14313
32 Ga0070681_10000103 3300005458 Bacteria 63054
33 Ga0070681_10030721 3300005458 Bacteria 5391
34 Ga0070685_10004477 3300005466 Bacteria 7068
35 Ga0070706_100029016 3300005467 Archaea 5095
36 Ga0070707_100000260 3300005468 Bacteria 52836
37 Ga0070707_100000304 3300005468 Bacteria 48115
38 Ga0070707_100015557 3300005468 Bacteria 7138
39 Ga0070698_100001782 3300005471 Bacteria 23961
40 Ga0070698_100005937 3300005471 Bacteria 13315
41 Ga0070698_100010098 3300005471 Bacteria 10083
42 Ga0070698_100015844 3300005471 Bacteria 7961
43 Ga0070698_100037305 3300005471 Archaea 5011
44 Ga0070699_100001105 3300005518 Bacteria 25093
45 Ga0070699_100002357 3300005518 Bacteria 16955
46 Ga0070699_100012311 3300005518 Bacteria 7380
47 Ga0070679_100000492 3300005530 Bacteria 33622
48 Ga0070697_100000100 3300005536 Bacteria 70649
49 Ga0070697_100005511 3300005536 Bacteria 9757
50 Ga0070672_100007844 3300005543 Bacteria 7284
51 Ga0070686_100002968 3300005544 Bacteria 9302
52 Ga0070686_100003641 3300005544 Bacteria 8456
53 Ga0070696_100013632 3300005546 Bacteria 5455
54 Ga0070704_100000860 3300005549 Bacteria 15196
55 Ga0070704_100006056 3300005549 Bacteria 7094
56 Ga0070664_100000399 3300005564 Bacteria 32416
57 Ga0068857_100000175 3300005577 Bacteria 40688
58 Ga0068859_100007992 3300005617 Bacteria 10724
59 Ga0068859_100015160 3300005617 Bacteria 7737
60 Ga0068859_100026307 3300005617 Bacteria 5833
61 Ga0068864_100000573 3300005618 Bacteria 31278
62 Ga0068864_100002219 3300005618 Bacteria 16048
63 Ga0068864_100005951 3300005618 Bacteria 10005
64 Ga0068864_100029214 3300005618 Bacteria 4665
65 Ga0068861_100006577 3300005719 Bacteria 7930
66 Ga0068863_100006170 3300005841 Bacteria 11754
67 Ga0068863_100029985 3300005841 Bacteria 5196
68 Ga0068863_100045353 3300005841 Bacteria 4172
69 Ga0068858_100040648 3300005842 Bacteria 4313
70 Ga0068860_100005807 3300005843 Bacteria 12429
71 Ga0068860_100006325 3300005843 Bacteria 11893
72 Ga0068860_100015932 3300005843 Bacteria 7336
73 Ga0068860_100030214 3300005843 Bacteria 5211
74 Ga0081539_10001384 3300005985 Bacteria 41854
75 Ga0081539_10004345 3300005985 Bacteria 15801
76 Ga0097621_100000969 3300006237 Bacteria 20087
77 Ga0097621_100002643 3300006237 Bacteria 12268
78 Ga0068871_100003112 3300006358 Bacteria 11387
79 Ga0075434_100013663 3300006871 Bacteria 7740
80 Ga0068865_100003640 3300006881 Bacteria 9260
81 Ga0075436_100000051 3300006914 Bacteria 70811
82 Ga0097620_100007992 3300006931 Bacteria 10724
83 Ga0097620_100015160 3300006931 Bacteria 7737
84 Ga0097620_100026305 3300006931 Bacteria 5833
85 Ga0075435_100001157 3300007076 Bacteria 16832
86 Ga0114129_10045614 3300009147 Bacteria 6161
87 Ga0114129_10056504 3300009147 Bacteria 5497
88 Ga0105243_10000039 3300009148 Bacteria 166207
89 Ga0105243_10000086 3300009148 Bacteria 105723
90 Ga0105241_10009033 3300009174 Bacteria 7330
91 Ga0105241_10013391 3300009174 Bacteria 6011
92 Ga0105242_10000013 3300009176 Bacteria 133981
93 Ga0105242_10000057 3300009176 Bacteria 75984
94 Ga0105242_10002742 3300009176 Bacteria 13782
95 Ga0105248_10000894 3300009177 Bacteria 33367
96 Ga0105248_10004787 3300009177 Bacteria 14982
97 Ga0105248_10045862 3300009177 Bacteria 4900
98 Ga0105249_10000018 3300009553 Bacteria 275907
99 Ga0105249_10016924 3300009553 Bacteria 6470
100 Ga0105249_10019106 3300009553 Bacteria 6112
101 Ga0157373_10003667 3300013100 Bacteria 11609
102 Ga0157373_10003965 3300013100 Bacteria 11173
103 Ga0157373_10028669 3300013100 Bacteria 4016
104 Ga0157369_10001189 3300013105 Bacteria 32473
105 Ga0157378_10001338 3300013297 Bacteria 22133
106 Ga0157378_10001815 3300013297 Bacteria 19141
107 Ga0157378_10019098 3300013297 Bacteria 6022
108 Ga0163162_10000001 3300013306 Bacteria 751833
109 Ga0163162_10000589 3300013306 Bacteria 33742
110 Ga0163162_10001518 3300013306 Bacteria 21625
111 Ga0163162_10001664 3300013306 Bacteria 20846
112 Ga0163162_10019786 3300013306 Bacteria 6610
113 Ga0163162_10023123 3300013306 Bacteria 6131
114 Ga0157375_10020643 3300013308 Bacteria 6023
115 Ga0163163_10000298 3300014325 Bacteria 49128
116 Ga0163163_10000801 3300014325 Bacteria 26677
117 Ga0163163_10005061 3300014325 Bacteria 11365
118 Ga0163163_10005713 3300014325 Bacteria 10789
119 Ga0163163_10018227 3300014325 Bacteria 6566
120 Ga0157380_10001944 3300014326 Bacteria 13741
121 Ga0157376_10003352 3300014969 Bacteria 11018
122 Ga0157376_10008328 3300014969 Bacteria 7478
123 Ga0163161_10004990 3300017792 Bacteria 9238
124 Ga0213876_10000011 3300021384 Bacteria 414473
125 Ga0213876_10000112 3300021384 Bacteria 89665
126 Ga0213876_10015015 3300021384 Bacteria 4105
127 Ga0207653_10000016 3300025885 Bacteria 145405
128 Ga0207710_10001565 3300025900 Bacteria 11245
129 Ga0207647_10001353 3300025904 Bacteria 18823
130 Ga0207645_10016374 3300025907 Bacteria 4908
131 Ga0207643_10000812 3300025908 Bacteria 18974
132 Ga0207684_10000053 3300025910 Bacteria 225260
133 Ga0207654_10007994 3300025911 Bacteria 5333
134 Ga0207707_10000033 3300025912 Bacteria 158362
135 Ga0207707_10027147 3300025912 Bacteria 5006
136 Ga0207660_10004035 3300025917 Bacteria 9579
137 Ga0207652_10000032 3300025921 Bacteria 143319
138 Ga0207646_10000870 3300025922 Bacteria 38972
139 Ga0207646_10000920 3300025922 Bacteria 37949
140 Ga0207646_10032563 3300025922 Unclassified 4717
141 Ga0207694_10007685 3300025924 Bacteria 8167
142 Ga0207694_10013503 3300025924 Bacteria 6153
143 Ga0207650_10000007 3300025925 Bacteria 530810
144 Ga0207650_10017765 3300025925 Unclassified 4982
145 Ga0207650_10035596 3300025925 Unclassified 3618
146 Ga0207644_10008603 3300025931 Bacteria 6675
147 Ga0207686_10000006 3300025934 Bacteria 259583
148 Ga0207686_10000037 3300025934 Bacteria 127619
149 Ga0207709_10000037 3300025935 Bacteria 279771
150 Ga0207709_10000113 3300025935 Bacteria 126620
151 Ga0207704_10009011 3300025938 Bacteria 4797
152 Ga0207711_10003473 3300025941 Bacteria 13640
153 Ga0207711_10005874 3300025941 Bacteria 10363
154 Ga0207689_10000395 3300025942 Bacteria 40984
155 Ga0207679_10005791 3300025945 Bacteria 7760
156 Ga0207712_10000081 3300025961 Bacteria 114043
157 Ga0207712_10016730 3300025961 Bacteria 4754
158 Ga0207668_10003046 3300025972 Bacteria 9822
159 Ga0207640_10022626 3300025981 Unclassified 3765
160 Ga0207703_10027035 3300026035 Bacteria 4519
161 Ga0207641_10006697 3300026088 Bacteria 9654
162 Ga0207641_10023271 3300026088 Bacteria 5104
163 Ga0207676_10004106 3300026095 Bacteria 10276
164 Ga0207676_10007382 3300026095 Bacteria 7795
165 Ga0207676_10026261 3300026095 Bacteria 4330
166 Ga0207674_10000058 3300026116 Bacteria 113012
167 Ga0207675_100026082 3300026118 Bacteria 5439
168 Ga0207698_10024587 3300026142 Bacteria 4231
169 Ga0207428_10004366 3300027907 Bacteria 13492
170 Ga0207428_10005074 3300027907 Bacteria 12363
171 Ga0268264_10012031 3300028381 Bacteria 7124
172 Ga0307408_100005647 3300031548 Bacteria 8351
173 Ga0307405_10006294 3300031731 Bacteria 5828
174 Ga0307405_10010640 3300031731 Bacteria 4781
175 Ga0307410_10006153 3300031852 Bacteria 6444
176 Ga0307406_10006431 3300031901 Bacteria 6485
177 Ga0307412_10013375 3300031911 Bacteria 4810
178 Ga0307414_10000766 3300032004 Bacteria 16464
179 Ga0307411_10007590 3300032005 Bacteria 5544
180 Ga0307411_10011367 3300032005 Bacteria 4802
181 Ga0307415_100000463 3300032126 Bacteria 17506
182 Ga0307415_100008173 3300032126 Bacteria 5784
183 Ga0395905_0003256 3300037471 Bacteria 17459
184 Ga0242422_00026 3300038699 Bacteria 5837
185 Ga0436365_0819321 3300039437 Bacteria 8552
186 Ga0436365_0970387 3300039437 Bacteria 322356
187 Ga0436365_1425589 3300039437 Bacteria 204653
188 Ga0439458_0000187 3300042157 Bacteria 14118
189 Ga0495663_0000092 3300046525 Bacteria 39532
190 Ga0495672_0029393 3300047320 Bacteria 3461
191 Ga0496109_0000014 3300048912 Bacteria 223246
192 Ga0501306_000322 3300049127 Bacteria 3448
193 Ga0501308_000170 3300049128 Bacteria 3530
194 Ga0501308_000201 3300049128 Unclassified 3368
195 Ga0501309_000356 3300049129 Unclassified 3488
196 Ga0501309_000382 3300049129 Bacteria 3428
197 Ga0501310_000490 3300049130 Bacteria 3443
198 Ga0501343_000133 3300049132 Unclassified 3486
199 Ga0501304_000087 3300049160 Unclassified 3355
200 Ga0501305_000425 3300049161 Unclassified 3427
201 Ga0501307_000190 3300049162 Bacteria 3452
202 Ga0501307_000211 3300049162 Unclassified 3390
203 Ga0501298_000886 3300049521 Bacteria 4243
204 Ga0501311_000222 3300049527 Bacteria 3402
205 Ga0501312_000344 3300049528 Bacteria 3532
206 Ga0501312_000400 3300049528 Unclassified 3387
207 Ga0501313_000207 3300049529 Bacteria 3421
208 Ga0501318_000153 3300049534 Bacteria 3399
209 Ga0501321_000189 3300049537 Bacteria 3447
210 Ga0501321_000207 3300049537 Unclassified 3362
211 Ga0501322_000097 3300049538 Unclassified 3345
212 Ga0501323_000324 3300049539 Unclassified 3344
213 Ga0501324_000092 3300049540 Unclassified 3400
214 Ga0501198_000337 3300049649 Bacteria 5952
215 Ga0501224_000436 3300049664 Bacteria 5003
216 Ga0501227_000462 3300049665 Bacteria 8652
217 Ga0501225_0001089 3300049705 Bacteria 8529
218 nmdc:mga05p37_21110_c1 3300050507 Bacteria 7883
219 nmdc:mga08y16_2496_c1 3300050511 Bacteria 18913
220 nmdc:mga08y16_27487_c1 3300050511 Bacteria 5996
221 nmdc:mga0n895_2449_c1 3300050512 Bacteria 14496
222 nmdc:mga0rr50_863_c1 3300050513 Bacteria 16350
223 nmdc:mga08x19_116_c1 3300050514 Bacteria 70950
224 nmdc:mga0a205_17192_c1 3300050515 Bacteria 6775
225 nmdc:mga0a205_50797_c1 3300050515 Bacteria 4003
226 Ga0587091_000506 3300059511 Bacteria 3400
227 Ga0587109_000704 3300059624 Bacteria 3429
228 Ga0587062_000218 3300059639 Bacteria 3483
229 Ga0587068_000551 3300059641 Bacteria 3527
230 Ga0587076_000425 3300059645 Bacteria 3383
231 Ga0587079_000545 3300059647 Bacteria 3457
232 Ga0587111_0000558 3300060346 Bacteria 3692
233 Ga0070706_100000053
234 JGI24751J29686_10000003
235 Ga0058859_10022886
236 Ga0058860_11759988
237 Ga0065715_10007005
238 Ga0065715_10013077
239 Ga0065715_10093716
240 Ga0070690_100002348
241 Ga0070670_100000167
242 Ga0070670_100044561
243 Ga0068869_100001221
244 Ga0070680_100018971
245 Ga0070682_100000091
246 Ga0070682_100004170
247 Ga0068868_100004192
248 Ga0070689_100001142
249 Ga0070689_100011982
250 Ga0070668_100002437
251 Ga0070675_100034965
252 Ga0070675_100038674
253 Ga0070671_100004745
254 Ga0070671_100042246
255 Ga0070674_100018689
256 Ga0070659_100000353
257 Ga0070703_10000085
258 Ga0070701_10010371
259 Ga0070694_100001664
260 Ga0070694_100003343
261 Ga0070694_100006644
262 Ga0070708_100000200
263 Ga0070708_100002463
264 Ga0070681_10000103
265 Ga0070681_10030721
266 Ga0070685_10004477
267 Ga0070706_100029016
268 Ga0070707_100000260
269 Ga0070707_100000304
270 Ga0070707_100015557
271 Ga0070698_100001782
272 Ga0070698_100005937
273 Ga0070698_100010098
274 Ga0070698_100015844
275 Ga0070698_100037305
276 Ga0070699_100001105
277 Ga0070699_100002357
278 Ga0070699_100012311
279 Ga0070679_100000492
280 Ga0070697_100000100
281 Ga0070697_100005511
282 Ga0070672_100007844
283 Ga0070686_100002968
284 Ga0070686_100003641
285 Ga0070696_100013632
286 Ga0070704_100000860
287 Ga0070704_100006056
288 Ga0070664_100000399
289 Ga0068857_100000175
290 Ga0068859_100007992
291 Ga0068859_100015160
292 Ga0068859_100026307
293 Ga0068864_100000573
294 Ga0068864_100002219
295 Ga0068864_100005951
296 Ga0068864_100029214
297 Ga0068861_100006577
298 Ga0068863_100006170
299 Ga0068863_100029985
300 Ga0068863_100045353
301 Ga0068858_100040648
302 Ga0068860_100005807
303 Ga0068860_100006325
304 Ga0068860_100015932
305 Ga0068860_100030214
306 Ga0081539_10001384
307 Ga0081539_10004345
308 Ga0097621_100000969
309 Ga0097621_100002643
310 Ga0068871_100003112
311 Ga0075434_100013663
312 Ga0068865_100003640
313 Ga0075436_100000051
314 Ga0097620_100007992
315 Ga0097620_100015160
316 Ga0097620_100026305
317 Ga0075435_100001157
318 Ga0114129_10045614
319 Ga0114129_10056504
320 Ga0105243_10000039
321 Ga0105243_10000086
322 Ga0105241_10009033
323 Ga0105241_10013391
324 Ga0105242_10000013
325 Ga0105242_10000057
326 Ga0105242_10002742
327 Ga0105248_10000894
328 Ga0105248_10004787
329 Ga0105248_10045862
330 Ga0105249_10000018
331 Ga0105249_10016924
332 Ga0105249_10019106
333 Ga0157373_10003667
334 Ga0157373_10003965
335 Ga0157373_10028669
336 Ga0157369_10001189
337 Ga0157378_10001338
338 Ga0157378_10001815
339 Ga0157378_10019098
340 Ga0163162_10000001
341 Ga0163162_10000589
342 Ga0163162_10001518
343 Ga0163162_10001664
344 Ga0163162_10019786
345 Ga0163162_10023123
346 Ga0157375_10020643
347 Ga0163163_10000298
348 Ga0163163_10000801
349 Ga0163163_10005061
350 Ga0163163_10005713
351 Ga0163163_10018227
352 Ga0157380_10001944
353 Ga0157376_10003352
354 Ga0157376_10008328
355 Ga0163161_10004990
356 Ga0213876_10000011
357 Ga0213876_10000112
358 Ga0213876_10015015
359 Ga0207653_10000016
360 Ga0207710_10001565
361 Ga0207647_10001353
362 Ga0207645_10016374
363 Ga0207643_10000812
364 Ga0207684_10000053
365 Ga0207654_10007994
366 Ga0207707_10000033
367 Ga0207707_10027147
368 Ga0207660_10004035
369 Ga0207652_10000032
370 Ga0207646_10000870
371 Ga0207646_10000920
372 Ga0207646_10032563
373 Ga0207694_10007685
374 Ga0207694_10013503
375 Ga0207650_10000007
376 Ga0207650_10017765
377 Ga0207650_10035596
378 Ga0207644_10008603
379 Ga0207686_10000006
380 Ga0207686_10000037
381 Ga0207709_10000037
382 Ga0207709_10000113
383 Ga0207704_10009011
384 Ga0207711_10003473
385 Ga0207711_10005874
386 Ga0207689_10000395
387 Ga0207679_10005791
388 Ga0207712_10000081
389 Ga0207712_10016730
390 Ga0207668_10003046
391 Ga0207640_10022626
392 Ga0207703_10027035
393 Ga0207641_10006697
394 Ga0207641_10023271
395 Ga0207676_10004106
396 Ga0207676_10007382
397 Ga0207676_10026261
398 Ga0207674_10000058
399 Ga0207675_100026082
400 Ga0207698_10024587
401 Ga0207428_10004366
402 Ga0207428_10005074
403 Ga0268264_10012031
404 Ga0307408_100005647
405 Ga0307405_10006294
406 Ga0307405_10010640
407 Ga0307410_10006153
408 Ga0307406_10006431
409 Ga0307412_10013375
410 Ga0307414_10000766
411 Ga0307411_10007590
412 Ga0307411_10011367
413 Ga0307415_100000463
414 Ga0307415_100008173
415 Ga0395905_0003256
416 Ga0242422_00026
417 Ga0436365_0819321
418 Ga0436365_0970387
419 Ga0436365_1425589
420 Ga0439458_0000187
421 Ga0495663_0000092
422 Ga0495672_0029393
423 Ga0496109_0000014
424 Ga0501306_000322
425 Ga0501308_000170
426 Ga0501308_000201
427 Ga0501309_000356
428 Ga0501309_000382
429 Ga0501310_000490
430 Ga0501343_000133
431 Ga0501304_000087
432 Ga0501305_000425
433 Ga0501307_000190
434 Ga0501307_000211
435 Ga0501298_000886
436 Ga0501311_000222
437 Ga0501312_000344
438 Ga0501312_000400
439 Ga0501313_000207
440 Ga0501318_000153
441 Ga0501321_000189
442 Ga0501321_000207
443 Ga0501322_000097
444 Ga0501323_000324
445 Ga0501324_000092
446 Ga0501198_000337
447 Ga0501224_000436
448 Ga0501227_000462
449 Ga0501225_0001089
450 nmdc:mga05p37_21110_c1
451 nmdc:mga08y16_2496_c1
452 nmdc:mga08y16_27487_c1
453 nmdc:mga0n895_2449_c1
454 nmdc:mga0rr50_863_c1
455 nmdc:mga08x19_116_c1
456 nmdc:mga0a205_17192_c1
457 nmdc:mga0a205_50797_c1
458 Ga0587091_000506
459 Ga0587109_000704
460 Ga0587062_000218
461 Ga0587068_000551
462 Ga0587076_000425
463 Ga0587079_000545
464 Ga0587111_0000558

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13620

CarboxypepD_reg

Carboxypeptidase regulatory-like domain

33

115

0.95

PF07715

Plug

TonB-dependent Receptor Plug Domain

134

240

0.85

PF17802

SpaA

Prealbumin-like fold domain

32

118

0.81

PF17210

SdrD_B

SdrD B-like domain

34

136

0.75

PF00593

TonB_dep_Rec_b-barrel

TonB dependent receptor-like, beta-barrel

471

1052

0.63

Structural Annotation

Top 5 Hits

ID Description Score Start End
4v4c-assembly3.cif.gz_F crystal structure of pyrogallol-phloroglucinol transhydroxylase from pelobacter acidigallici 0.8642 29 104
4iyk-assembly1.cif.gz_A crystal structure of a putative carbohydrate binding protein (bacuni_04699) from bacteroides uniformis atcc 8492 at 2.00 a resolution 0.7508 33 104
3is0-assembly1.cif.gz_X crystal structure of functional region of uafa from staphylococcus saprophyticus in the presence of cholesterol 0.735 32 101
3irp-assembly1.cif.gz_X crystal structure of functional region of uafa from staphylococcus saprophyticus at 1.50 angstrom resolution 0.7327 26 91
3is1-assembly1.cif.gz_X crystal structure of functional region of uafa from staphylococcus saprophyticus in c2 form at 2.45 angstrom resolution 0.7208 32 98
ID Description Score Start End Superfamily
af_D3ZSA9_396_1214_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8602 31 89 2.60.40.10
1ti2B03 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8208 29 104 2.60.40.10
af_A0A1P8AV46_397_495_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.7919 31 104 2.60.40.1120
3irpX03 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.7896 30 91 2.60.40.10
af_A1Z843_117_195_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.7807 31 102 2.60.40.10
ID Description Score Start End GO Terms
AF-A0A2V8PEP7-F1-model_v4 TonB-dependent receptor 0.8624 24 97 GO:0030246
AF-A0A2V9JJX5-F1-model_v4 TonB-dependent receptor 0.8559 26 102 GO:0030246
AF-A0A2V8PEP7-F1-model_v4 TonB-dependent receptor 0.7916 24 97 GO:0030246
AF-A0A2V8AY54-F1-model_v4 TonB-dependent receptor 0.7486 11 104 GO:0009279
GO:0015344
GO:0030246
AF-A0A7T9HYX3-F1-model_v4 deleted 0.746 31 102

Map