F344292

General Info

Members Datasets Scaffolds Average Seq Length
231 148 462 651

Family's Representative Sequence

Representative Sequence 3300042876|Ga0451577_0081739|Ga0451577_0081739_160_2295
Length 711
Sequence VSVPILDRLKNPAELRGLTEAELLQLAAEIRDTIIRTVAVTGGHLGSSLGVVEITLALHRVLESPRDHVVWDTGHQAYAHKLLTGRLDRFATLRQIDGLGGFPRRSESPHDVFDGGHAGTGLSIAQGLATARDLRHTMERVAVVVGDAALLSGLSLEALNDIGHRQTQLLIVLNDNEMSISPSVGALSKYLSEIKLSAAWQQGRSAYDTVTERIPVVGPRAVELSRRFRQSVVSFAQPGQLFEDLGITYVGVMPGHDRRLLEETFRRALALNGPVIVHVRTQKGKGYRPAERDQVSFHGAALPPMALAPAADSHDRVAAPRRNNGEAMASSAAGGASLTHSRGADEGAPPSASVLSDRRTHAQPVDEEGTAVPYAAPEQKGEAAKTPNYTAFFAQELLALGAEDRRIVGITAGMPTGTGLAKFQAAYPDRFIDVGIAEQHAVTLATGLALGGMRPVVALYSTFLQRAFDQTVHDVCQNDAPVVLAVDRAGLVGEDGTSHQGMFTIPAQRMLPNLVIASPKDEQELRSLLRTAFAQDHPFALHYPRDAGFGVPAVEPRAIPVGRGEVIRDGRDLLFVAFGPITMRALEVADALEALGWSVGVINARYAKPLDRQLILDQARGKRLVVTFEESVVTGGFGSGVLEAFEEARIMDPAFRDVPVRILGIPGDRFVDHGAVTDLRRLIRLDVPGLTGQVTETLEQLGIATPATGRA

Samples

Sample ID Description Type Environment
1 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
2 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
45 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
58 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
87 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
88 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
89 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
90 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
91 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
92 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
93 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
94 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
95 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
96 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
97 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
98 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
99 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
100 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
101 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
102 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
103 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
104 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
105 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
106 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
107 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
108 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
109 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
110 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
111 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
112 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
113 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
114 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
115 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
116 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
117 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
118 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
119 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
120 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
121 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
128 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
129 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
130 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
131 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
132 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
133 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
134 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
135 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
136 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
137 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
138 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
139 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
140 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
141 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
142 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
143 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
144 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
145 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
146 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
147 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
148 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 6.93
Rhizosphere 91.34
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451577_0081739 3300042876 Bacteria 2882
2 Ga0065714_10002186 3300005288 Bacteria 191932
3 Ga0065712_10000113 3300005290 Bacteria 191931
4 Ga0070683_100001788 3300005329 Bacteria 16752
5 Ga0070680_100000127 3300005336 Bacteria 45220
6 Ga0068868_100000144 3300005338 Bacteria 46092
7 Ga0070660_100050526 3300005339 Bacteria 3200
8 Ga0070687_100003485 3300005343 Bacteria 6120
9 Ga0070661_100000601 3300005344 Bacteria 26884
10 Ga0070661_100021008 3300005344 Bacteria 4661
11 Ga0070675_100003810 3300005354 Bacteria 11450
12 Ga0070675_100023776 3300005354 Bacteria 4903
13 Ga0070673_100001686 3300005364 Bacteria 13103
14 Ga0070703_10002080 3300005406 Bacteria 5829
15 Ga0070705_100002693 3300005440 Bacteria 8880
16 Ga0070694_100065992 3300005444 Bacteria 2482
17 Ga0070708_100000815 3300005445 Bacteria 23530
18 Ga0070678_100000019 3300005456 Bacteria 51607
19 Ga0070662_100018923 3300005457 Bacteria 4666
20 Ga0070681_10050447 3300005458 Bacteria 4152
21 Ga0068867_100017740 3300005459 Bacteria 5052
22 Ga0070706_100000968 3300005467 Bacteria 31344
23 Ga0070706_100038096 3300005467 Bacteria 4439
24 Ga0070707_100001032 3300005468 Bacteria 27578
25 Ga0070698_100009845 3300005471 Bacteria 10217
26 Ga0070698_100013015 3300005471 Bacteria 8807
27 Ga0070698_100016246 3300005471 Bacteria 7857
28 Ga0070698_100024016 3300005471 Bacteria 6366
29 Ga0070698_100098729 3300005471 Bacteria 2894
30 Ga0070698_100099427 3300005471 Bacteria 2882
31 Ga0070698_100128968 3300005471 Bacteria 2485
32 Ga0070699_100001116 3300005518 Bacteria 25013
33 Ga0070699_100005074 3300005518 Bacteria 11591
34 Ga0070699_100005645 3300005518 Bacteria 10957
35 Ga0068853_100013421 3300005539 Bacteria 6687
36 Ga0070672_100000151 3300005543 Bacteria 38113
37 Ga0070695_100019508 3300005545 Bacteria 4129
38 Ga0070695_100025613 3300005545 Bacteria 3643
39 Ga0070695_100036825 3300005545 Bacteria 3080
40 Ga0070696_100002319 3300005546 Bacteria 12559
41 Ga0070696_100007064 3300005546 Bacteria 7497
42 Ga0070704_100041710 3300005549 Bacteria 3169
43 Ga0068855_100211754 3300005563 Bacteria 2177
44 Ga0070664_100000957 3300005564 Bacteria 22562
45 Ga0068864_100013400 3300005618 Bacteria 6794
46 Ga0068860_100030861 3300005843 Bacteria 5152
47 Ga0068862_100132847 3300005844 Bacteria 2203
48 Ga0081539_10000480 3300005985 Bacteria 84478
49 Ga0081539_10004946 3300005985 Bacteria 14164
50 Ga0097621_100000274 3300006237 Bacteria 34921
51 Ga0068871_100000325 3300006358 Bacteria 33222
52 Ga0075428_100005021 3300006844 Bacteria 14702
53 Ga0075433_10036276 3300006852 Bacteria 4246
54 Ga0075433_10039721 3300006852 Bacteria 4070
55 Ga0075434_100063991 3300006871 Bacteria 3662
56 Ga0075435_100011492 3300007076 Bacteria 6518
57 Ga0111539_10010746 3300009094 Bacteria 11523
58 Ga0105245_10014533 3300009098 Bacteria 6855
59 Ga0105245_10015245 3300009098 Bacteria 6696
60 Ga0114129_10000135 3300009147 Bacteria 76177
61 Ga0114129_10063952 3300009147 Bacteria 5135
62 Ga0114129_10120824 3300009147 Bacteria 3607
63 Ga0114129_10130423 3300009147 Bacteria 3453
64 Ga0105243_10003592 3300009148 Bacteria 12509
65 Ga0105241_10025969 3300009174 Bacteria 4356
66 Ga0105248_10059814 3300009177 Bacteria 4280
67 Ga0105249_10078143 3300009553 Bacteria 3070
68 Ga0105249_10102557 3300009553 Bacteria 2693
69 Ga0105239_10144454 3300010375 Bacteria 2653
70 Ga0157374_10001008 3300013296 Bacteria 24403
71 Ga0157378_10017700 3300013297 Bacteria 6256
72 Ga0157378_10091907 3300013297 Bacteria 2760
73 Ga0157378_10126230 3300013297 Bacteria 2364
74 Ga0163162_10010907 3300013306 Bacteria 8846
75 Ga0157375_10004457 3300013308 Bacteria 12159
76 Ga0157375_10034781 3300013308 Bacteria 4802
77 Ga0163163_10031715 3300014325 Bacteria 5102
78 Ga0157377_10023521 3300014745 Bacteria 3266
79 Ga0157379_10012319 3300014968 Bacteria 7470
80 Ga0157376_10006156 3300014969 Bacteria 8451
81 Ga0213876_10000006 3300021384 Bacteria 700803
82 Ga0213876_10000200 3300021384 Bacteria 61250
83 Ga0207656_10009930 3300025321 Bacteria 3546
84 Ga0207684_10012153 3300025910 Bacteria 7493
85 Ga0207684_10022263 3300025910 Bacteria 5411
86 Ga0207660_10000001 3300025917 Bacteria 1034169
87 Ga0207662_10004506 3300025918 Bacteria 7338
88 Ga0207649_10001372 3300025920 Bacteria 14441
89 Ga0207646_10014170 3300025922 Bacteria 7581
90 Ga0207646_10017251 3300025922 Bacteria 6762
91 Ga0207650_10000798 3300025925 Bacteria 24176
92 Ga0207659_10001152 3300025926 Bacteria 15749
93 Ga0207687_10042505 3300025927 Bacteria 3127
94 Ga0207644_10000221 3300025931 Bacteria 39277
95 Ga0207706_10015531 3300025933 Bacteria 6879
96 Ga0207691_10000413 3300025940 Bacteria 42800
97 Ga0207711_10033821 3300025941 Bacteria 4328
98 Ga0207689_10113032 3300025942 Bacteria 2232
99 Ga0207661_10010056 3300025944 Bacteria 6798
100 Ga0207679_10004829 3300025945 Bacteria 8405
101 Ga0207651_10000142 3300025960 Bacteria 31331
102 Ga0207677_10000329 3300026023 Bacteria 34285
103 Ga0207677_10019507 3300026023 Bacteria 4096
104 Ga0207639_10007415 3300026041 Bacteria 7479
105 Ga0207641_10110236 3300026088 Bacteria 2439
106 Ga0207648_10002379 3300026089 Bacteria 20244
107 Ga0207674_10002864 3300026116 Bacteria 21428
108 Ga0207674_10019120 3300026116 Bacteria 7426
109 Ga0207674_10043168 3300026116 Bacteria 4650
110 Ga0207683_10000588 3300026121 Bacteria 33464
111 Ga0209983_1001270 3300027665 Bacteria 5610
112 Ga0209971_1002120 3300027682 Bacteria 4832
113 Ga0209998_10000171 3300027717 Bacteria 24143
114 Ga0209998_10000596 3300027717 Bacteria 9708
115 Ga0209974_10002571 3300027876 Bacteria 6590
116 Ga0268264_10004171 3300028381 Bacteria 12346
117 Ga0265326_10010764 3300028558 Bacteria 2710
118 Ga0265319_1003508 3300028563 Bacteria 8147
119 Ga0265319_1014873 3300028563 Bacteria 3036
120 Ga0265334_10008196 3300028573 Bacteria 4448
121 Ga0265318_10014960 3300028577 Bacteria 3242
122 Ga0265338_10020521 3300028800 Bacteria 6947
123 Ga0265338_10029350 3300028800 Bacteria 5453
124 Ga0265324_10003485 3300029957 Bacteria 7453
125 Ga0265324_10007800 3300029957 Bacteria 4303
126 Ga0265320_10010777 3300031240 Bacteria 5418
127 Ga0265329_10004594 3300031242 Bacteria 5707
128 Ga0265316_10009134 3300031344 Bacteria 9132
129 Ga0265316_10034206 3300031344 Bacteria 4130
130 Ga0265313_10010458 3300031595 Bacteria 5862
131 Ga0265314_10002080 3300031711 Bacteria 21101
132 Ga0316576_10006966 3300031727 Bacteria 7069
133 Ga0316576_10065680 3300031727 Bacteria 2667
134 Ga0307405_10058149 3300031731 Bacteria 2432
135 Ga0307416_100002528 3300032002 Bacteria 10528
136 Ga0373941_0012049 3300035115 Bacteria 2251
137 Ga0316574_0043328 3300035398 Bacteria 2781
138 Ga0373947_0018705 3300035725 Bacteria 3989
139 Ga0373937_0092349 3300036401 Bacteria 2806
140 Ga0316582_0007603 3300036647 Bacteria 5777
141 Ga0316582_0063676 3300036647 Bacteria 2370
142 Ga0316584_0016610 3300036712 Bacteria 5279
143 Ga0316584_0070039 3300036712 Bacteria 2630
144 Ga0395905_0029256 3300037471 Bacteria 5192
145 Ga0436365_0065130 3300039437 Bacteria 167769
146 Ga0436365_1344587 3300039437 Bacteria 210334
147 Ga0495628_0037573 3300046516 Bacteria 3883
148 Ga0495640_0009433 3300046533 Bacteria 7602
149 Ga0495634_0044496 3300046642 Bacteria 3005
150 Ga0495680_0089484 3300047322 Bacteria 2311
151 Ga0496102_0006492 3300048905 Bacteria 9973
152 Ga0496103_0010254 3300048906 Bacteria 5542
153 Ga0496105_0001431 3300048908 Bacteria 16790
154 Ga0496106_0024733 3300048909 Bacteria 4466
155 Ga0496108_0006304 3300048911 Bacteria 9615
156 Ga0496108_0027226 3300048911 Bacteria 4718
157 Ga0496108_0048762 3300048911 Bacteria 3541
158 Ga0496109_0008291 3300048912 Bacteria 8822
159 Ga0496109_0071588 3300048912 Bacteria 3184
160 Ga0496109_0102694 3300048912 Bacteria 2653
161 Ga0496110_0002718 3300048913 Bacteria 13361
162 Ga0496110_0015997 3300048913 Bacteria 6256
163 Ga0496110_0073796 3300048913 Bacteria 3028
164 Ga0496111_0001489 3300048914 Bacteria 13418
165 Ga0496111_0052343 3300048914 Bacteria 2948
166 Ga0496112_0000005 3300048915 Bacteria 525541
167 Ga0501031_0089172 3300049568 Bacteria 2011
168 Ga0501036_0032836 3300049572 Bacteria 4388
169 Ga0501036_0056394 3300049572 Bacteria 3329
170 Ga0501036_0062259 3300049572 Bacteria 3160
171 Ga0501036_0069962 3300049572 Bacteria 2967
172 Ga0501036_0193662 3300049572 Bacteria 1710
173 Ga0501040_0003251 3300049576 Bacteria 10503
174 Ga0501040_0062852 3300049576 Bacteria 2554
175 Ga0501041_0012230 3300049577 Bacteria 5083
176 Ga0501042_0052418 3300049578 Bacteria 2910
177 Ga0501042_0090639 3300049578 Bacteria 2194
178 Ga0501042_0106370 3300049578 Bacteria 2019
179 Ga0501048_0019621 3300049582 Bacteria 4958
180 Ga0501048_0040221 3300049582 Bacteria 3351
181 Ga0501067_0012230 3300049583 Bacteria 4756
182 Ga0501067_0032168 3300049583 Bacteria 2911
183 Ga0501068_0012213 3300049584 Bacteria 4859
184 Ga0501068_0026014 3300049584 Bacteria 3445
185 Ga0501068_0030651 3300049584 Bacteria 3192
186 Ga0501068_0036554 3300049584 Bacteria 2937
187 Ga0501069_0030387 3300049585 Bacteria 2966
188 Ga0501071_0015614 3300049587 Bacteria 5214
189 Ga0501071_0015858 3300049587 Bacteria 5175
190 Ga0501071_0029820 3300049587 Bacteria 3853
191 Ga0501072_0004004 3300049588 Bacteria 11155
192 Ga0501072_0014344 3300049588 Bacteria 6074
193 Ga0501072_0044227 3300049588 Bacteria 3502
194 Ga0501072_0051238 3300049588 Bacteria 3251
195 Ga0501072_0055268 3300049588 Bacteria 3129
196 Ga0501074_0005204 3300049590 Bacteria 9352
197 Ga0501074_0014407 3300049590 Bacteria 5755
198 Ga0501075_0003012 3300049591 Bacteria 11253
199 Ga0501076_0008473 3300049592 Bacteria 7535
200 Ga0501076_0017490 3300049592 Bacteria 5450
201 Ga0501076_0046060 3300049592 Bacteria 3445
202 Ga0501076_0050916 3300049592 Bacteria 3277
203 Ga0501076_0054943 3300049592 Bacteria 3157
204 Ga0501077_0025575 3300049593 Bacteria 3749
205 Ga0501077_0039747 3300049593 Bacteria 2997
206 Ga0501079_0019387 3300049741 Bacteria 5194
207 Ga0501079_0019799 3300049741 Bacteria 5142
208 Ga0501081_0036350 3300049743 Bacteria 3359
209 Ga0501081_0037718 3300049743 Bacteria 3298
210 Ga0501035_0063165 3300049822 Bacteria 3294
211 Ga0501035_0087072 3300049822 Bacteria 2753
212 nmdc:mga05p37_170712_c1 3300050507 Bacteria 2652
213 nmdc:mga05p37_32048_c1 3300050507 Bacteria 6426
214 nmdc:mga05p37_44_c1 3300050507 Bacteria 107032
215 nmdc:mga08y16_14575_c1 3300050511 Bacteria 8267
216 nmdc:mga0n895_15211_c1 3300050512 Bacteria 7011
217 nmdc:mga0a205_110365_c1 3300050515 Bacteria 2649
218 nmdc:mga0a205_46572_c1 3300050515 Bacteria 4182
219 Ga0495601_0002191 3300053077 Bacteria 10993
220 Ga0495619_0000914 3300053085 Bacteria 19366
221 Ga0501084_0008136 3300054114 Bacteria 8643
222 Ga0501084_0011285 3300054114 Bacteria 7396
223 Ga0501084_0023080 3300054114 Bacteria 5193
224 Ga0501084_0031864 3300054114 Bacteria 4409
225 Ga0590071_005908 3300059421 Bacteria 2933
226 Ga0501082_0006530 3300060353 Bacteria 10114
227 Ga0501082_0011868 3300060353 Bacteria 7487
228 Ga0501082_0021030 3300060353 Bacteria 5628
229 Ga0530510_0007284 3300061734 Bacteria 7696
230 Ga0530510_0010826 3300061734 Bacteria 6398
231 Ga0530510_0058734 3300061734 Bacteria 2781
232 Ga0451577_0081739
233 Ga0065714_10002186
234 Ga0065712_10000113
235 Ga0070683_100001788
236 Ga0070680_100000127
237 Ga0068868_100000144
238 Ga0070660_100050526
239 Ga0070687_100003485
240 Ga0070661_100000601
241 Ga0070661_100021008
242 Ga0070675_100003810
243 Ga0070675_100023776
244 Ga0070673_100001686
245 Ga0070703_10002080
246 Ga0070705_100002693
247 Ga0070694_100065992
248 Ga0070708_100000815
249 Ga0070678_100000019
250 Ga0070662_100018923
251 Ga0070681_10050447
252 Ga0068867_100017740
253 Ga0070706_100000968
254 Ga0070706_100038096
255 Ga0070707_100001032
256 Ga0070698_100009845
257 Ga0070698_100013015
258 Ga0070698_100016246
259 Ga0070698_100024016
260 Ga0070698_100098729
261 Ga0070698_100099427
262 Ga0070698_100128968
263 Ga0070699_100001116
264 Ga0070699_100005074
265 Ga0070699_100005645
266 Ga0068853_100013421
267 Ga0070672_100000151
268 Ga0070695_100019508
269 Ga0070695_100025613
270 Ga0070695_100036825
271 Ga0070696_100002319
272 Ga0070696_100007064
273 Ga0070704_100041710
274 Ga0068855_100211754
275 Ga0070664_100000957
276 Ga0068864_100013400
277 Ga0068860_100030861
278 Ga0068862_100132847
279 Ga0081539_10000480
280 Ga0081539_10004946
281 Ga0097621_100000274
282 Ga0068871_100000325
283 Ga0075428_100005021
284 Ga0075433_10036276
285 Ga0075433_10039721
286 Ga0075434_100063991
287 Ga0075435_100011492
288 Ga0111539_10010746
289 Ga0105245_10014533
290 Ga0105245_10015245
291 Ga0114129_10000135
292 Ga0114129_10063952
293 Ga0114129_10120824
294 Ga0114129_10130423
295 Ga0105243_10003592
296 Ga0105241_10025969
297 Ga0105248_10059814
298 Ga0105249_10078143
299 Ga0105249_10102557
300 Ga0105239_10144454
301 Ga0157374_10001008
302 Ga0157378_10017700
303 Ga0157378_10091907
304 Ga0157378_10126230
305 Ga0163162_10010907
306 Ga0157375_10004457
307 Ga0157375_10034781
308 Ga0163163_10031715
309 Ga0157377_10023521
310 Ga0157379_10012319
311 Ga0157376_10006156
312 Ga0213876_10000006
313 Ga0213876_10000200
314 Ga0207656_10009930
315 Ga0207684_10012153
316 Ga0207684_10022263
317 Ga0207660_10000001
318 Ga0207662_10004506
319 Ga0207649_10001372
320 Ga0207646_10014170
321 Ga0207646_10017251
322 Ga0207650_10000798
323 Ga0207659_10001152
324 Ga0207687_10042505
325 Ga0207644_10000221
326 Ga0207706_10015531
327 Ga0207691_10000413
328 Ga0207711_10033821
329 Ga0207689_10113032
330 Ga0207661_10010056
331 Ga0207679_10004829
332 Ga0207651_10000142
333 Ga0207677_10000329
334 Ga0207677_10019507
335 Ga0207639_10007415
336 Ga0207641_10110236
337 Ga0207648_10002379
338 Ga0207674_10002864
339 Ga0207674_10019120
340 Ga0207674_10043168
341 Ga0207683_10000588
342 Ga0209983_1001270
343 Ga0209971_1002120
344 Ga0209998_10000171
345 Ga0209998_10000596
346 Ga0209974_10002571
347 Ga0268264_10004171
348 Ga0265326_10010764
349 Ga0265319_1003508
350 Ga0265319_1014873
351 Ga0265334_10008196
352 Ga0265318_10014960
353 Ga0265338_10020521
354 Ga0265338_10029350
355 Ga0265324_10003485
356 Ga0265324_10007800
357 Ga0265320_10010777
358 Ga0265329_10004594
359 Ga0265316_10009134
360 Ga0265316_10034206
361 Ga0265313_10010458
362 Ga0265314_10002080
363 Ga0316576_10006966
364 Ga0316576_10065680
365 Ga0307405_10058149
366 Ga0307416_100002528
367 Ga0373941_0012049
368 Ga0316574_0043328
369 Ga0373947_0018705
370 Ga0373937_0092349
371 Ga0316582_0007603
372 Ga0316582_0063676
373 Ga0316584_0016610
374 Ga0316584_0070039
375 Ga0395905_0029256
376 Ga0436365_0065130
377 Ga0436365_1344587
378 Ga0495628_0037573
379 Ga0495640_0009433
380 Ga0495634_0044496
381 Ga0495680_0089484
382 Ga0496102_0006492
383 Ga0496103_0010254
384 Ga0496105_0001431
385 Ga0496106_0024733
386 Ga0496108_0006304
387 Ga0496108_0027226
388 Ga0496108_0048762
389 Ga0496109_0008291
390 Ga0496109_0071588
391 Ga0496109_0102694
392 Ga0496110_0002718
393 Ga0496110_0015997
394 Ga0496110_0073796
395 Ga0496111_0001489
396 Ga0496111_0052343
397 Ga0496112_0000005
398 Ga0501031_0089172
399 Ga0501036_0032836
400 Ga0501036_0056394
401 Ga0501036_0062259
402 Ga0501036_0069962
403 Ga0501036_0193662
404 Ga0501040_0003251
405 Ga0501040_0062852
406 Ga0501041_0012230
407 Ga0501042_0052418
408 Ga0501042_0090639
409 Ga0501042_0106370
410 Ga0501048_0019621
411 Ga0501048_0040221
412 Ga0501067_0012230
413 Ga0501067_0032168
414 Ga0501068_0012213
415 Ga0501068_0026014
416 Ga0501068_0030651
417 Ga0501068_0036554
418 Ga0501069_0030387
419 Ga0501071_0015614
420 Ga0501071_0015858
421 Ga0501071_0029820
422 Ga0501072_0004004
423 Ga0501072_0014344
424 Ga0501072_0044227
425 Ga0501072_0051238
426 Ga0501072_0055268
427 Ga0501074_0005204
428 Ga0501074_0014407
429 Ga0501075_0003012
430 Ga0501076_0008473
431 Ga0501076_0017490
432 Ga0501076_0046060
433 Ga0501076_0050916
434 Ga0501076_0054943
435 Ga0501077_0025575
436 Ga0501077_0039747
437 Ga0501079_0019387
438 Ga0501079_0019799
439 Ga0501081_0036350
440 Ga0501081_0037718
441 Ga0501035_0063165
442 Ga0501035_0087072
443 nmdc:mga05p37_170712_c1
444 nmdc:mga05p37_32048_c1
445 nmdc:mga05p37_44_c1
446 nmdc:mga08y16_14575_c1
447 nmdc:mga0n895_15211_c1
448 nmdc:mga0a205_110365_c1
449 nmdc:mga0a205_46572_c1
450 Ga0495601_0002191
451 Ga0495619_0000914
452 Ga0501084_0008136
453 Ga0501084_0011285
454 Ga0501084_0023080
455 Ga0501084_0031864
456 Ga0590071_005908
457 Ga0501082_0006530
458 Ga0501082_0011868
459 Ga0501082_0021030
460 Ga0530510_0007284
461 Ga0530510_0010826
462 Ga0530510_0058734

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13292

DXP_synthase_N

1-deoxy-D-xylulose-5-phosphate synthase

6

281

0.99

PF02779

Transket_pyr

Transketolase, pyrimidine binding domain

385

549

0.97

PF02780

Transketolase_C

Transketolase, C-terminal domain

562

690

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
2o1s-assembly1.cif.gz_B 1-deoxy-d-xylulose 5-phosphate synthase (dxs) from escherichia coli 0.9705 1 626
8a5k-assembly1.cif.gz_A structural analysis of 1-deoxy-d-xylulose 5-phosphate synthase from pseudomonas aeruginosa and klebsiella pneumoniae reveals conformational changes upon cofactor binding 0.9678 3 624
8a4d-assembly2.cif.gz_E 1-deoxy-d-xylulose 5-phosphate synthase from pseudomonas aeruginosa with a thiamine analog inhibitor 0.9677 2 625
8a29-assembly2.cif.gz_D error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.967 3 626
8a29-assembly1.cif.gz_E error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.967 3 625
ID Description Score Start End Superfamily
2o1xD03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.972 494 623 3.40.50.920
2o1sD01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9669 4 278 3.40.50.970
af_Q58092_187_315_3.40.50.920 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9652 494 626 3.40.50.920
af_A0A1D6M458_593_733_3.40.50.920 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.965 494 623 3.40.50.920
af_I1M1A4_399_568_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9602 317 484 3.40.50.970
ID Description Score Start End GO Terms
AF-A0A838MYF3-F1-model_v4 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) 0.9924 418 638 GO:0005829
GO:0008661
GO:0009228
GO:0016114
GO:0019288
GO:0046872
GO:0052865
AF-A0A4Q3RQQ5-F1-model_v4 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) 0.9891 1 127 GO:0005829
GO:0008661
GO:0016114
GO:0019288
GO:0046872
AF-A0A527A4F2-F1-model_v4 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7) 0.987 2 113 GO:0008661
GO:0016114
GO:0046872
AF-A0A554M9Y0-F1-model_v4 1-deoxy-D-xylulose-5-phosphate synthase 0.9868 3 115 GO:0005829
GO:0008661
GO:0016114
GO:0019288
AF-A0A358JLW4-F1-model_v4 deleted 0.9866 2 129

Map