F343903

General Info

Members Datasets Scaffolds Average Seq Length
231 177 462 392

Family's Representative Sequence

Representative Sequence 3300006058|Ga0075432_10000101|Ga0075432_1000010115
Length 418
Sequence MHSLGPKSRHDVYVNVNYADKVSADGKSLMTSPFALGEEHNDFRAAVADFAARDLAPHVERWNAAHEAPLEAIKLMADLDLFGLGGPEEYGGAGDFTSLCIAIEEIGKVDQSLGITLEAAVGLGINPIAHFGTAEQKARWLPDLCAGRALAAFGLTEPEAGSDAGATRTRAVLRDREWVINGSKQFITNSGTDITSLCTVTARTGTRDNGKPEISAIIVPVGTPGFEVGPSYAKLGWHASDTHPLTFTDVRVPEDHLLGERGYGYQQFLSILDDGRVAIAALALGCIRACLELATQYAMQRTAFGVPIGRKQGVGFQIADLDVMAAAAHQLVYSAAAMRDHGGRAEEFKRAAAIAKLYATESAVSAARIATQVFGGYGFMEEYPVARFYRDAKVLEIGEGTSEVQRLLIARRLGLPVE

Samples

Sample ID Description Type Environment
1 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
5 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
26 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
29 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300012508 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.old.270510 Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
81 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
82 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
83 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
84 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
85 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
86 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
87 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
88 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
89 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
90 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
91 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
92 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
93 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
94 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
95 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
96 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
97 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
98 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
99 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
100 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
101 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
102 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
103 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
104 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
105 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
106 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
107 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
108 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
109 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
110 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
111 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
112 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
113 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
114 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
115 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
116 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
117 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
118 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
119 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
120 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
121 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
122 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
123 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
124 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
125 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
126 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
135 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
136 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
137 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
138 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
139 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
140 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
141 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
142 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
143 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
144 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
145 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
146 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
147 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
148 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
149 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
150 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
151 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
152 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
153 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
154 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
155 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
156 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
157 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
158 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
159 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
160 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
161 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
162 2643221615 Nocardioides sp. Root224 Isolate Unclassified
163 2643221641 Nocardioides sp. Root122 Isolate Unclassified
164 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
165 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
166 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
167 2739367898 Nocardioides sp. CF479 Isolate Unclassified
168 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
169 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
170 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
171 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
172 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
173 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
174 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
175 2919395869 Microbacterium resistens 2980 Isolate Unclassified
176 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule
177 8055157932 Frankia umida Ag45/Mut15 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 92.64
Metatranscriptomes 0
Isolates 7.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.49
Nodule 0.87
Rhizoplane 5.63
Rhizosphere 83.12
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075432_10000101 3300006058 Bacteria 18315
2 JGI24740J21852_10008849 3300001979 Bacteria 3987
3 JGI24739J22299_10005803 3300001989 Bacteria 4675
4 JGI24737J22298_10013433 3300001990 Bacteria 2664
5 JGI25407J50210_10001654 3300003373 Bacteria 5099
6 Ga0070683_100028216 3300005329 Bacteria 5071
7 Ga0070683_100189702 3300005329 Bacteria 1952
8 Ga0070683_100216263 3300005329 Bacteria 1821
9 Ga0070680_100000019 3300005336 Bacteria 83282
10 Ga0070682_100093520 3300005337 Bacteria 1971
11 Ga0070674_100057048 3300005356 Bacteria 2710
12 Ga0070659_100208009 3300005366 Bacteria 1612
13 Ga0070714_100262149 3300005435 Bacteria 1601
14 Ga0070708_100000502 3300005445 Bacteria 29428
15 Ga0070708_100051952 3300005445 Bacteria 3633
16 Ga0070663_100044827 3300005455 Bacteria 3121
17 Ga0070662_100023089 3300005457 Bacteria 4269
18 Ga0070706_100000021 3300005467 Bacteria 162774
19 Ga0070706_100000221 3300005467 Bacteria 69778
20 Ga0070707_100000105 3300005468 Bacteria 76460
21 Ga0070698_100018352 3300005471 Bacteria 7366
22 Ga0070698_100030243 3300005471 Bacteria 5616
23 Ga0070698_100045695 3300005471 Bacteria 4481
24 Ga0070699_100000837 3300005518 Bacteria 28543
25 Ga0070684_100086640 3300005535 Bacteria 2780
26 Ga0068853_100245805 3300005539 Bacteria 1641
27 Ga0070704_100020523 3300005549 Bacteria 4262
28 Ga0070664_100022763 3300005564 Bacteria 5169
29 Ga0070702_100093323 3300005615 Bacteria 1830
30 Ga0068852_100052739 3300005616 Bacteria 3497
31 Ga0068852_100168038 3300005616 Bacteria 2054
32 Ga0068866_10034570 3300005718 Bacteria 2463
33 Ga0068861_100075214 3300005719 Bacteria 2628
34 Ga0068860_100055096 3300005843 Bacteria 3780
35 Ga0081455_10000960 3300005937 Bacteria 36843
36 Ga0081455_10007554 3300005937 Bacteria 11432
37 Ga0081455_10015441 3300005937 Bacteria 7420
38 Ga0081538_10000350 3300005981 Bacteria 52656
39 Ga0081539_10000208 3300005985 Bacteria 136941
40 Ga0081539_10022964 3300005985 Bacteria 4103
41 Ga0070717_10040476 3300006028 Bacteria 3796
42 Ga0075365_10000528 3300006038 Bacteria 14699
43 Ga0075365_10013146 3300006038 Bacteria 4937
44 Ga0075365_10020256 3300006038 Bacteria 4120
45 Ga0075365_10072030 3300006038 Bacteria 2327
46 Ga0075364_10059667 3300006051 Bacteria 2501
47 Ga0075367_10024977 3300006178 Bacteria 3374
48 Ga0075428_100002057 3300006844 Bacteria 21695
49 Ga0075428_100003868 3300006844 Bacteria 16449
50 Ga0075428_100097200 3300006844 Bacteria 3210
51 Ga0075428_100100985 3300006844 Bacteria 3145
52 Ga0075428_100180161 3300006844 Bacteria 2288
53 Ga0075430_100005669 3300006846 Bacteria 10541
54 Ga0075431_100005313 3300006847 Bacteria 12699
55 Ga0075431_100055593 3300006847 Bacteria 4083
56 Ga0075433_10000832 3300006852 Bacteria 21596
57 Ga0075433_10012690 3300006852 Bacteria 6818
58 Ga0075434_100000238 3300006871 Bacteria 38170
59 Ga0075434_100010307 3300006871 Bacteria 8762
60 Ga0075429_100015758 3300006880 Bacteria 6547
61 Ga0068865_100103453 3300006881 Bacteria 2089
62 Ga0075436_100002267 3300006914 Bacteria 13278
63 Ga0075435_100003528 3300007076 Bacteria 10617
64 Ga0111539_10000095 3300009094 Bacteria 93635
65 Ga0111539_10002580 3300009094 Bacteria 23985
66 Ga0105245_10074444 3300009098 Bacteria 3090
67 Ga0105245_10102708 3300009098 Bacteria 2648
68 Ga0114129_10002741 3300009147 Bacteria 24556
69 Ga0114129_10004878 3300009147 Bacteria 18928
70 Ga0114129_10203766 3300009147 Bacteria 2678
71 Ga0105243_10042445 3300009148 Bacteria 3561
72 Ga0105242_10028566 3300009176 Bacteria 4443
73 Ga0105242_10078544 3300009176 Bacteria 2755
74 Ga0105238_10068691 3300009551 Bacteria 3544
75 Ga0105249_10066935 3300009553 Bacteria 3308
76 Ga0105239_10009208 3300010375 Bacteria 11167
77 Ga0157315_1001194 3300012508 Bacteria 1393
78 Ga0157370_10125858 3300013104 Bacteria 2392
79 Ga0157369_10155663 3300013105 Bacteria 2414
80 Ga0157378_10057648 3300013297 Bacteria 3462
81 Ga0163162_10057204 3300013306 Bacteria 3927
82 Ga0157372_10099135 3300013307 Bacteria 3323
83 Ga0157372_10129219 3300013307 Bacteria 2906
84 Ga0157372_10140847 3300013307 Bacteria 2778
85 Ga0157380_10095917 3300014326 Bacteria 2458
86 Ga0207642_10013126 3300025899 Bacteria 3014
87 Ga0207688_10016300 3300025901 Bacteria 4030
88 Ga0207647_10035265 3300025904 Bacteria 3189
89 Ga0207647_10144541 3300025904 Bacteria 1393
90 Ga0207705_10068536 3300025909 Bacteria 2569
91 Ga0207684_10000095 3300025910 Bacteria 165210
92 Ga0207646_10000027 3300025922 Bacteria 235383
93 Ga0207646_10000053 3300025922 Bacteria 160799
94 Ga0207664_10025177 3300025929 Bacteria 4478
95 Ga0207706_10013964 3300025933 Bacteria 7282
96 Ga0207706_10054291 3300025933 Bacteria 3536
97 Ga0207686_10046513 3300025934 Bacteria 2677
98 Ga0207709_10027223 3300025935 Bacteria 3291
99 Ga0207669_10090720 3300025937 Bacteria 1988
100 Ga0207704_10013063 3300025938 Bacteria 4143
101 Ga0207661_10101514 3300025944 Bacteria 2417
102 Ga0207679_10012930 3300025945 Bacteria 5461
103 Ga0207667_10252620 3300025949 Bacteria 1804
104 Ga0207668_10138836 3300025972 Bacteria 1866
105 Ga0207640_10204417 3300025981 Bacteria 1499
106 Ga0207648_10075686 3300026089 Bacteria 2934
107 Ga0207674_10212470 3300026116 Bacteria 1883
108 Ga0207675_100012534 3300026118 Bacteria 7919
109 Ga0207698_10061614 3300026142 Bacteria 2925
110 Ga0207428_10000102 3300027907 Bacteria 118940
111 Ga0207428_10002324 3300027907 Bacteria 19038
112 Ga0307515_10196714 3300028794 Bacteria 1906
113 Ga0307513_10160442 3300031456 Bacteria 2142
114 Ga0307408_100021224 3300031548 Bacteria 4393
115 Ga0307413_10006466 3300031824 Bacteria 5356
116 Ga0307410_10000323 3300031852 Bacteria 18618
117 Ga0307406_10001419 3300031901 Bacteria 13274
118 Ga0307407_10012686 3300031903 Bacteria 4061
119 Ga0307409_100002136 3300031995 Bacteria 10185
120 Ga0307416_100000046 3300032002 Bacteria 120916
121 Ga0307416_100219289 3300032002 Bacteria 1822
122 Ga0307411_10121133 3300032005 Bacteria 1893
123 Ga0307415_100000401 3300032126 Bacteria 18454
124 Ga0307415_100064817 3300032126 Bacteria 2543
125 Ga0373959_0016065 3300034820 Bacteria 1383
126 Ga0439450_001978 3300042008 Bacteria 3129
127 Ga0439455_0015190 3300042012 Bacteria 1768
128 Ga0439463_020310 3300042016 Bacteria 1656
129 Ga0450888_003490 3300042126 Bacteria 1596
130 Ga0439435_0009063 3300042436 Bacteria 2327
131 Ga0466969_0034886 3300044656 Bacteria 2548
132 Ga0466965_0007968 3300044683 Bacteria 4886
133 Ga0466965_0030282 3300044683 Bacteria 2637
134 Ga0466965_0053383 3300044683 Bacteria 2009
135 Ga0466965_0069209 3300044683 Bacteria 1773
136 Ga0466961_0040165 3300044693 Bacteria 2999
137 Ga0466963_0020732 3300044694 Bacteria 4136
138 Ga0466963_0041902 3300044694 Bacteria 3004
139 Ga0466963_0095735 3300044694 Bacteria 2027
140 Ga0466971_0016117 3300044719 Bacteria 3293
141 Ga0466970_0023604 3300044765 Bacteria 3213
142 Ga0466970_0055936 3300044765 Bacteria 2108
143 Ga0466960_0001455 3300044901 Bacteria 8629
144 Ga0466960_0001971 3300044901 Bacteria 7602
145 Ga0466959_0022422 3300045049 Bacteria 4668
146 Ga0466958_0067013 3300045836 Bacteria 2192
147 Ga0466967_0163667 3300045976 Bacteria 2090
148 Ga0495653_0016023 3300046463 Bacteria 6109
149 Ga0495664_0066604 3300046477 Bacteria 2148
150 Ga0495607_0071758 3300046501 Bacteria 1930
151 Ga0495598_0030245 3300046537 Bacteria 1516
152 Ga0495656_0056527 3300046615 Bacteria 1696
153 Ga0495657_0071561 3300046675 Bacteria 2263
154 Ga0495670_0129466 3300046691 Bacteria 1315
155 Ga0495660_0128332 3300046810 Bacteria 1275
156 Ga0496102_0211870 3300048905 Bacteria 1826
157 Ga0496103_0018005 3300048906 Bacteria 4233
158 Ga0496105_0191017 3300048908 Bacteria 1674
159 Ga0496106_0012282 3300048909 Bacteria 6321
160 Ga0496107_0063029 3300048910 Bacteria 2686
161 Ga0496108_0024133 3300048911 Bacteria 5006
162 Ga0496108_0101944 3300048911 Bacteria 2449
163 Ga0496110_0039836 3300048913 Bacteria 4093
164 Ga0496110_0047161 3300048913 Bacteria 3771
165 Ga0496111_0014773 3300048914 Bacteria 5344
166 Ga0496113_0083475 3300048916 Bacteria 2451
167 Ga0496114_0105036 3300048917 Bacteria 2416
168 Ga0496114_0163111 3300048917 Bacteria 1939
169 Ga0501031_0206942 3300049568 Bacteria 1279
170 Ga0501032_0034666 3300049569 Bacteria 3454
171 Ga0501032_0107539 3300049569 Bacteria 1847
172 Ga0501036_0187191 3300049572 Bacteria 1742
173 Ga0501038_0018718 3300049574 Bacteria 6254
174 Ga0501039_0029849 3300049575 Bacteria 4201
175 Ga0501039_0037748 3300049575 Bacteria 3730
176 Ga0501040_0025605 3300049576 Bacteria 3967
177 Ga0501041_0048780 3300049577 Bacteria 2579
178 Ga0501043_0137258 3300049579 Bacteria 1916
179 Ga0501068_0027712 3300049584 Bacteria 3347
180 Ga0501071_0029646 3300049587 Bacteria 3864
181 Ga0501071_0223046 3300049587 Bacteria 1419
182 Ga0501074_0010837 3300049590 Bacteria 6620
183 Ga0501076_0006031 3300049592 Bacteria 8764
184 Ga0501225_0017560 3300049705 Bacteria 1986
185 Ga0501079_0016725 3300049741 Bacteria 5601
186 Ga0501081_0086957 3300049743 Bacteria 2195
187 Ga0501035_0141516 3300049822 Bacteria 2091
188 nmdc:mga0yw44_125394_c1 3300050492 Bacteria 1658
189 nmdc:mga0yw44_21659_c1 3300050492 Bacteria 3590
190 nmdc:mga0yw44_2242_c1 3300050492 Bacteria 8152
191 nmdc:mga06z11_33951_c1 3300050494 Bacteria 2500
192 nmdc:mga05p37_29651_c1 3300050507 Bacteria 6676
193 nmdc:mga05p37_454081_c1 3300050507 Bacteria 1482
194 nmdc:mga09592_15453_c1 3300050508 Bacteria 6238
195 nmdc:mga0qj67_24703_c1 3300050509 Bacteria 4636
196 nmdc:mga06r32_24258_c1 3300050510 Bacteria 5626
197 nmdc:mga06r32_69045_c1 3300050510 Bacteria 3415
198 nmdc:mga08y16_2042_c1 3300050511 Bacteria 20694
199 nmdc:mga0n895_142730_c1 3300050512 Bacteria 2424
200 nmdc:mga0n895_3611_c1 3300050512 Bacteria 12507
201 nmdc:mga0rr50_2329_c1 3300050513 Bacteria 10669
202 nmdc:mga08x19_600_c1 3300050514 Bacteria 23378
203 nmdc:mga0a205_228_c1 3300050515 Bacteria 39737
204 nmdc:mga0a205_39694_c1 3300050515 Bacteria 4530
205 Ga0495601_0027733 3300053077 Bacteria 3503
206 Ga0500644_0000410 3300053088 Bacteria 20195
207 Ga0500556_0000560 3300053104 Bacteria 24819
208 Ga0500593_000116 3300053117 Bacteria 30957
209 Ga0500568_0003905 3300053139 Bacteria 8115
210 Ga0500573_0022558 3300053140 Bacteria 3612
211 Ga0501084_0155725 3300054114 Bacteria 1927
212 Ga0501084_0175676 3300054114 Bacteria 1808
213 Ga0501084_0440163 3300054114 Bacteria 1102
214 Ga0530510_0188008 3300061734 Bacteria 1533
215 2515856660 2515154155 Bacteria 7985436
216 2644090500 2643221615 Bacteria 5487866
217 2644231571 2643221641 Bacteria 4490190
218 2644323372 2643221657 Bacteria 5490246
219 2676473532 2675903058 Bacteria 6822861
220 2676494442 2675903060 Bacteria 10051191
221 2740167329 2739367898 Bacteria 4367674
222 2816423764 2816332119 Bacteria 8120218
223 2827632045 2827628540 Bacteria 6858585
224 2837269211 2837268691 Bacteria 7850704
225 2857485660 2857481737 Bacteria 4761446
226 2868092776 2868088558 Bacteria 7609351
227 2883823309 2883821847 Bacteria 5121194
228 2887443878 2887443736 Bacteria 4426037
229 2919398728 2919395869 Bacteria 3704152
230 8054613995 8054609563 Bacteria 5170090
231 8055162753 8055157932 Bacteria 6429399
232 Ga0075432_10000101
233 JGI24740J21852_10008849
234 JGI24739J22299_10005803
235 JGI24737J22298_10013433
236 JGI25407J50210_10001654
237 Ga0070683_100028216
238 Ga0070683_100189702
239 Ga0070683_100216263
240 Ga0070680_100000019
241 Ga0070682_100093520
242 Ga0070674_100057048
243 Ga0070659_100208009
244 Ga0070714_100262149
245 Ga0070708_100000502
246 Ga0070708_100051952
247 Ga0070663_100044827
248 Ga0070662_100023089
249 Ga0070706_100000021
250 Ga0070706_100000221
251 Ga0070707_100000105
252 Ga0070698_100018352
253 Ga0070698_100030243
254 Ga0070698_100045695
255 Ga0070699_100000837
256 Ga0070684_100086640
257 Ga0068853_100245805
258 Ga0070704_100020523
259 Ga0070664_100022763
260 Ga0070702_100093323
261 Ga0068852_100052739
262 Ga0068852_100168038
263 Ga0068866_10034570
264 Ga0068861_100075214
265 Ga0068860_100055096
266 Ga0081455_10000960
267 Ga0081455_10007554
268 Ga0081455_10015441
269 Ga0081538_10000350
270 Ga0081539_10000208
271 Ga0081539_10022964
272 Ga0070717_10040476
273 Ga0075365_10000528
274 Ga0075365_10013146
275 Ga0075365_10020256
276 Ga0075365_10072030
277 Ga0075364_10059667
278 Ga0075367_10024977
279 Ga0075428_100002057
280 Ga0075428_100003868
281 Ga0075428_100097200
282 Ga0075428_100100985
283 Ga0075428_100180161
284 Ga0075430_100005669
285 Ga0075431_100005313
286 Ga0075431_100055593
287 Ga0075433_10000832
288 Ga0075433_10012690
289 Ga0075434_100000238
290 Ga0075434_100010307
291 Ga0075429_100015758
292 Ga0068865_100103453
293 Ga0075436_100002267
294 Ga0075435_100003528
295 Ga0111539_10000095
296 Ga0111539_10002580
297 Ga0105245_10074444
298 Ga0105245_10102708
299 Ga0114129_10002741
300 Ga0114129_10004878
301 Ga0114129_10203766
302 Ga0105243_10042445
303 Ga0105242_10028566
304 Ga0105242_10078544
305 Ga0105238_10068691
306 Ga0105249_10066935
307 Ga0105239_10009208
308 Ga0157315_1001194
309 Ga0157370_10125858
310 Ga0157369_10155663
311 Ga0157378_10057648
312 Ga0163162_10057204
313 Ga0157372_10099135
314 Ga0157372_10129219
315 Ga0157372_10140847
316 Ga0157380_10095917
317 Ga0207642_10013126
318 Ga0207688_10016300
319 Ga0207647_10035265
320 Ga0207647_10144541
321 Ga0207705_10068536
322 Ga0207684_10000095
323 Ga0207646_10000027
324 Ga0207646_10000053
325 Ga0207664_10025177
326 Ga0207706_10013964
327 Ga0207706_10054291
328 Ga0207686_10046513
329 Ga0207709_10027223
330 Ga0207669_10090720
331 Ga0207704_10013063
332 Ga0207661_10101514
333 Ga0207679_10012930
334 Ga0207667_10252620
335 Ga0207668_10138836
336 Ga0207640_10204417
337 Ga0207648_10075686
338 Ga0207674_10212470
339 Ga0207675_100012534
340 Ga0207698_10061614
341 Ga0207428_10000102
342 Ga0207428_10002324
343 Ga0307515_10196714
344 Ga0307513_10160442
345 Ga0307408_100021224
346 Ga0307413_10006466
347 Ga0307410_10000323
348 Ga0307406_10001419
349 Ga0307407_10012686
350 Ga0307409_100002136
351 Ga0307416_100000046
352 Ga0307416_100219289
353 Ga0307411_10121133
354 Ga0307415_100000401
355 Ga0307415_100064817
356 Ga0373959_0016065
357 Ga0439450_001978
358 Ga0439455_0015190
359 Ga0439463_020310
360 Ga0450888_003490
361 Ga0439435_0009063
362 Ga0466969_0034886
363 Ga0466965_0007968
364 Ga0466965_0030282
365 Ga0466965_0053383
366 Ga0466965_0069209
367 Ga0466961_0040165
368 Ga0466963_0020732
369 Ga0466963_0041902
370 Ga0466963_0095735
371 Ga0466971_0016117
372 Ga0466970_0023604
373 Ga0466970_0055936
374 Ga0466960_0001455
375 Ga0466960_0001971
376 Ga0466959_0022422
377 Ga0466958_0067013
378 Ga0466967_0163667
379 Ga0495653_0016023
380 Ga0495664_0066604
381 Ga0495607_0071758
382 Ga0495598_0030245
383 Ga0495656_0056527
384 Ga0495657_0071561
385 Ga0495670_0129466
386 Ga0495660_0128332
387 Ga0496102_0211870
388 Ga0496103_0018005
389 Ga0496105_0191017
390 Ga0496106_0012282
391 Ga0496107_0063029
392 Ga0496108_0024133
393 Ga0496108_0101944
394 Ga0496110_0039836
395 Ga0496110_0047161
396 Ga0496111_0014773
397 Ga0496113_0083475
398 Ga0496114_0105036
399 Ga0496114_0163111
400 Ga0501031_0206942
401 Ga0501032_0034666
402 Ga0501032_0107539
403 Ga0501036_0187191
404 Ga0501038_0018718
405 Ga0501039_0029849
406 Ga0501039_0037748
407 Ga0501040_0025605
408 Ga0501041_0048780
409 Ga0501043_0137258
410 Ga0501068_0027712
411 Ga0501071_0029646
412 Ga0501071_0223046
413 Ga0501074_0010837
414 Ga0501076_0006031
415 Ga0501225_0017560
416 Ga0501079_0016725
417 Ga0501081_0086957
418 Ga0501035_0141516
419 nmdc:mga0yw44_125394_c1
420 nmdc:mga0yw44_21659_c1
421 nmdc:mga0yw44_2242_c1
422 nmdc:mga06z11_33951_c1
423 nmdc:mga05p37_29651_c1
424 nmdc:mga05p37_454081_c1
425 nmdc:mga09592_15453_c1
426 nmdc:mga0qj67_24703_c1
427 nmdc:mga06r32_24258_c1
428 nmdc:mga06r32_69045_c1
429 nmdc:mga08y16_2042_c1
430 nmdc:mga0n895_142730_c1
431 nmdc:mga0n895_3611_c1
432 nmdc:mga0rr50_2329_c1
433 nmdc:mga08x19_600_c1
434 nmdc:mga0a205_228_c1
435 nmdc:mga0a205_39694_c1
436 Ga0495601_0027733
437 Ga0500644_0000410
438 Ga0500556_0000560
439 Ga0500593_000116
440 Ga0500568_0003905
441 Ga0500573_0022558
442 Ga0501084_0155725
443 Ga0501084_0175676
444 Ga0501084_0440163
445 Ga0530510_0188008
446 2515856660
447 2644090500
448 2644231571
449 2644323372
450 2676473532
451 2676494442
452 2740167329
453 2816423764
454 2827632045
455 2837269211
456 2857485660
457 2868092776
458 2883823309
459 2887443878
460 2919398728
461 8054613995
462 8055162753

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

37

148

0.99

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

262

414

0.98

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

277

403

0.94

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

152

250

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
7szv-assembly1.cif.gz_B-2 crystal structure of acyl-coa dehydrogenase from mycobacterium marinum in complex with fda 0.9794 3 384
7szv-assembly1.cif.gz_B-2 crystal structure of acyl-coa dehydrogenase from mycobacterium marinum in complex with fda 0.9768 3 384
7szv-assembly1.cif.gz_A-2 crystal structure of acyl-coa dehydrogenase from mycobacterium marinum in complex with fda 0.9737 3 384
7szv-assembly1.cif.gz_A-2 crystal structure of acyl-coa dehydrogenase from mycobacterium marinum in complex with fda 0.9711 3 384
4n5f-assembly1.cif.gz_A-2 crystal structure of a putative acyl-coa dehydrogenase with bound fadh2 from burkholderia cenocepacia j2315 0.9705 4 380
ID Description Score Start End Superfamily
af_I6Y0W5_130_248_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9817 122 235 2.40.110.10
af_I6Y0W5_249_394_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9727 238 384 1.20.140.10
4u83B01 Mainly Alpha;Orthogonal Bundle;Butyryl-Coa Dehydrogenase, subunit A; domain 1;Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.9678 3 116 1.10.540.10
1bucB03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9654 242 382 1.20.140.10
2ebaC01 Mainly Alpha;Orthogonal Bundle;Butyryl-Coa Dehydrogenase, subunit A; domain 1;Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.9653 4 116 1.10.540.10
ID Description Score Start End GO Terms
AF-A0A7V8YTB9-F1-model_v4 Acyl-CoA dehydrogenase family protein 0.9853 66 384 GO:0003995
GO:0050660
AF-A0A3D3QCL5-F1-model_v4 Acyl-CoA dehydrogenase 0.9851 42 387 GO:0003995
GO:0050660
AF-A0A2M9Q7L1-F1-model_v4 Acyl-CoA dehydrogenase 0.9822 11 249 GO:0003995
GO:0050660
AF-A0A7V8YTB9-F1-model_v4 Acyl-CoA dehydrogenase family protein 0.9791 66 384 GO:0003995
GO:0050660
AF-A0A544TDJ9-F1-model_v4 Acyl-CoA dehydrogenase 0.9759 4 383 GO:0003995
GO:0050660

Map