F343718
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 231 | 168 | 207 | 293 |
Family's Representative Sequence
| Representative Sequence | 3300005330|Ga0070690_100032268|Ga0070690_1000322681 |
| Length | 336 |
| Sequence | MSAKKILVTGANGQLGNEFRRLAKEYPQYEFLFAGRAELPIENATAVITYFQKYKPAICINCAAYTAVDKAETEREQSNLANAQAPAILAAACKENQTHFFHISTDYVFDGNSSVPYKESDDTSPVNHYGATKLKGEQAAIHNNPRSIIIRTSWVYSEYGNNFVKTMIRLMKEKTSINVVSDQVGSPTYAADLATAVMKMVETLERRWPLDADRWIGFDEMISAESFSTTARSISPVMGGDLSSYPSGIYHYSNEGSISWHEFATAIKEMTGSACIVNAIPTTQYPTPARRPRFSLLDKSKIKSVFGIEIPQWRESLERCLQRIRSQESGVRSQNS |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2162886007 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 | Metagenome | Rhizosphere |
| 2 | 2506520007 | Serratia plymuthica AS9 | Isolate | Rhizosphere |
| 3 | 2506520008 | Serratia plymuthica AS12 | Isolate | Unclassified |
| 4 | 2508501071 | Serratia proteamaculans S4 | Isolate | Rhizosphere |
| 5 | 2537561728 | Pectobacterium wasabiae CFBP 3304 | Isolate | Rhizoplane |
| 6 | 2554235234 | Klebsiella michiganensis SA2 | Isolate | Unclassified |
| 7 | 2602042067 | Enterobacter sp. NFIX58 | Isolate | Rhizoplane |
| 8 | 2654587920 | Serratia plymuthica HRO-C48 | Isolate | Rhizosphere |
| 9 | 2687453601 | Serratia plymuthica 3Rp8 | Isolate | Unclassified |
| 10 | 2706794495 | Dickeya zeae ZJU1202 | Isolate | Unclassified |
| 11 | 2855195626 | Pectobacterium atrosepticum SS26 | Isolate | Stem Tuber |
| 12 | 2881247448 | Flavobacterium beibuense RSKm HC5 | Isolate | Rhizosphere |
| 13 | 2890737413 | Parapedobacter sp. SGR-10 | Isolate | Rhizosphere |
| 14 | 2896344016 | Sphingobacterium sp. SGL-16 | Isolate | Rhizosphere |
| 15 | 2900051742 | Pectobacterium zantedeschiae 2M | Isolate | Stem Tuber |
| 16 | 2904474040 | Rahnella aquatilis 4485 | Isolate | Rhizosphere |
| 17 | 2904504865 | Serratia marcescens 1822 | Isolate | Unclassified |
| 18 | 2919150387 | Rahnella aceris 1817 | Isolate | Unclassified |
| 19 | 2919509842 | Flavobacterium arsenatis 3773 | Isolate | Unclassified |
| 20 | 2927143783 | Rahnella sp. 2050 | Isolate | Unclassified |
| 21 | 2937967321 | Serratia sp. YC16 | Isolate | Unclassified |
| 22 | 2965320100 | Flavobacterium agri MAH-1 | Isolate | Rhizosphere |
| 23 | 3300002737 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA | Metagenome | Endosphere |
| 24 | 3300002771 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB | Metagenome | Endosphere |
| 25 | 3300002772 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS | Metagenome | Endosphere |
| 26 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 27 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 28 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 29 | 3300003751 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 | Metagenome | Endosphere |
| 30 | 3300003752 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 | Metagenome | Endosphere |
| 31 | 3300003756 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 | Metagenome | Endosphere |
| 32 | 3300003759 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 | Metagenome | Endosphere |
| 33 | 3300003841 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 34 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 35 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 36 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 37 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 38 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 39 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 40 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 41 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 42 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 43 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 44 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 45 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 46 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 47 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 48 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 49 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 50 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 51 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 52 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 53 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 54 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 55 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 56 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 57 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 58 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 59 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 60 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 61 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 62 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 63 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 64 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 66 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 67 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 69 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 70 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 71 | 3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Metagenome | Rhizosphere |
| 72 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 74 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 75 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 76 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 77 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 78 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 79 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 80 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 81 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 82 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 83 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 84 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 85 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 86 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 87 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 88 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 89 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 90 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 91 | 3300015261 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG | Metagenome | Rhizosphere |
| 92 | 3300025207 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 93 | 3300025224 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 94 | 3300025225 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 95 | 3300025226 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 96 | 3300025230 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 97 | 3300025231 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 98 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 99 | 3300025253 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 100 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 101 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 102 | 3300025711 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 103 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 104 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 105 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 106 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 107 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 108 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 109 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 110 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 111 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 112 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 113 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 114 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 115 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 116 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 117 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 118 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 119 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 120 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 121 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 122 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 123 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 124 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 125 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 126 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 127 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 128 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 129 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 130 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 131 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 132 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 133 | 3300027111 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) | Metagenome | Nodule |
| 134 | 3300027312 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 135 | 3300027526 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 136 | 3300027876 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 137 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 138 | 3300030500 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) | Metagenome | Rhizosphere |
| 139 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 140 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 141 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 142 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 143 | 3300041460 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG | Metagenome | Rhizoplane |
| 144 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 145 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 146 | 3300046794 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere | Metagenome | Rhizosphere |
| 147 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 148 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 149 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 150 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 151 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 152 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 153 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 154 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 155 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 156 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 157 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 158 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 159 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 160 | 3300049550 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 161 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 162 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 163 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 164 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 165 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 166 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 167 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 168 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 90.48 |
| Metatranscriptomes | 0.43 |
| Isolates | 9.09 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 8.23 |
| Nodule | 1.73 |
| Rhizoplane | 1.73 |
| Rhizosphere | 74.89 |
| Stem | 0 |
| Stem Tuber | 0.87 |
| Unclassified | 12.55 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | SwRhRL2b_contig_3708624 | 2162886007 | Bacteria | 9197 |
| 2 | JGI25162J39368_1000019 | 3300002737 | Bacteria | 262053 |
| 3 | JGI25163J39215_1000121 | 3300002771 | Bacteria | 32543 |
| 4 | JGI25164J39214_1000011 | 3300002772 | Bacteria | 262057 |
| 5 | rootH2_10142284 | 3300003320 | Bacteria | 2928 |
| 6 | rootL2_10025523 | 3300003322 | Bacteria | 5862 |
| 7 | rootH1_10301502 | 3300003323 | Bacteria | 3728 |
| 8 | Ga0055538_1000021 | 3300003751 | Bacteria | 262057 |
| 9 | Ga0055539_1000026 | 3300003752 | Bacteria | 262057 |
| 10 | Ga0055533_1000035 | 3300003756 | Bacteria | 262057 |
| 11 | Ga0055525_1000045 | 3300003759 | Bacteria | 262057 |
| 12 | Ga0055541_1000020 | 3300003841 | Bacteria | 262057 |
| 13 | Ga0065704_10000708 | 3300005289 | Bacteria | 46350 |
| 14 | Ga0065704_10072412 | 3300005289 | Bacteria | 8573 |
| 15 | Ga0065704_10073181 | 3300005289 | Bacteria | 7494 |
| 16 | Ga0065704_10211214 | 3300005289 | Bacteria | 1108 |
| 17 | Ga0070690_100032268 | 3300005330 | Bacteria | 3270 |
| 18 | Ga0068869_100004214 | 3300005334 | Bacteria | 8924 |
| 19 | Ga0068869_100261859 | 3300005334 | Bacteria | 1384 |
| 20 | Ga0070666_10000197 | 3300005335 | Bacteria | 41178 |
| 21 | Ga0068868_100112744 | 3300005338 | Bacteria | 2211 |
| 22 | Ga0070668_100016532 | 3300005347 | Bacteria | 5516 |
| 23 | Ga0070668_100022148 | 3300005347 | Bacteria | 4803 |
| 24 | Ga0070669_100012601 | 3300005353 | Bacteria | 5999 |
| 25 | Ga0070671_100052393 | 3300005355 | Bacteria | 3393 |
| 26 | Ga0070674_100029109 | 3300005356 | Bacteria | 3633 |
| 27 | Ga0070673_100011492 | 3300005364 | Bacteria | 6044 |
| 28 | Ga0070673_100052798 | 3300005364 | Bacteria | 3190 |
| 29 | Ga0070688_100146661 | 3300005365 | Bacteria | 1609 |
| 30 | Ga0070688_100281799 | 3300005365 | Unclassified | 1194 |
| 31 | Ga0070667_100372647 | 3300005367 | Unclassified | 1296 |
| 32 | Ga0070662_100038988 | 3300005457 | Bacteria | 3378 |
| 33 | Ga0070685_10125848 | 3300005466 | Bacteria | 1596 |
| 34 | Ga0068853_100004753 | 3300005539 | Bacteria | 10558 |
| 35 | Ga0068853_100023760 | 3300005539 | Bacteria | 5135 |
| 36 | Ga0070672_100042434 | 3300005543 | Bacteria | 3502 |
| 37 | Ga0070672_100088817 | 3300005543 | Bacteria | 2489 |
| 38 | Ga0070686_100259343 | 3300005544 | Bacteria | 1273 |
| 39 | Ga0068857_100065258 | 3300005577 | Bacteria | 3236 |
| 40 | Ga0068857_100155383 | 3300005577 | Bacteria | 2074 |
| 41 | Ga0068854_100148526 | 3300005578 | Bacteria | 1805 |
| 42 | Ga0070702_100002362 | 3300005615 | Bacteria | 8115 |
| 43 | Ga0068852_100004067 | 3300005616 | Bacteria | 10288 |
| 44 | Ga0068859_100000007 | 3300005617 | Bacteria | 390070 |
| 45 | Ga0068859_100027384 | 3300005617 | Bacteria | 5717 |
| 46 | Ga0068859_100036095 | 3300005617 | Bacteria | 4961 |
| 47 | Ga0068864_100018022 | 3300005618 | Bacteria | 5893 |
| 48 | Ga0068864_100036579 | 3300005618 | Bacteria | 4185 |
| 49 | Ga0068866_10103074 | 3300005718 | Bacteria | 1578 |
| 50 | Ga0068861_100011938 | 3300005719 | Bacteria | 6049 |
| 51 | Ga0068861_100097906 | 3300005719 | Bacteria | 2328 |
| 52 | Ga0068863_100000444 | 3300005841 | Bacteria | 41977 |
| 53 | Ga0068858_100002218 | 3300005842 | Bacteria | 19660 |
| 54 | Ga0068858_100205784 | 3300005842 | Bacteria | 1862 |
| 55 | Ga0068860_100000661 | 3300005843 | Bacteria | 40073 |
| 56 | Ga0068862_100046968 | 3300005844 | Bacteria | 3683 |
| 57 | Ga0075366_10014977 | 3300006195 | Bacteria | 4434 |
| 58 | Ga0097621_100023411 | 3300006237 | Bacteria | 4810 |
| 59 | Ga0068871_100061725 | 3300006358 | Bacteria | 3062 |
| 60 | Ga0068871_100324252 | 3300006358 | Bacteria | 1357 |
| 61 | Ga0068865_100129431 | 3300006881 | Bacteria | 1889 |
| 62 | Ga0068865_100299933 | 3300006881 | Bacteria | 1286 |
| 63 | Ga0097620_100000007 | 3300006931 | Bacteria | 390070 |
| 64 | Ga0097620_100027383 | 3300006931 | Bacteria | 5717 |
| 65 | Ga0097620_100036096 | 3300006931 | Bacteria | 4961 |
| 66 | Ga0079104_1001448 | 3300006946 | Bacteria | 15868 |
| 67 | Ga0105251_10021563 | 3300009011 | Bacteria | 3361 |
| 68 | Ga0105244_10000636 | 3300009036 | Bacteria | 30959 |
| 69 | Ga0105250_10000002 | 3300009092 | Bacteria | 566949 |
| 70 | Ga0105250_10000101 | 3300009092 | Bacteria | 76942 |
| 71 | Ga0105250_10000859 | 3300009092 | Bacteria | 17937 |
| 72 | Ga0105250_10002451 | 3300009092 | Bacteria | 9317 |
| 73 | Ga0105250_10011005 | 3300009092 | Bacteria | 3760 |
| 74 | Ga0111539_10004778 | 3300009094 | Bacteria | 17690 |
| 75 | Ga0105247_10000025 | 3300009101 | Bacteria | 208459 |
| 76 | Ga0105247_10001984 | 3300009101 | Bacteria | 14204 |
| 77 | Ga0105247_10011720 | 3300009101 | Bacteria | 5274 |
| 78 | Ga0105241_10000424 | 3300009174 | Bacteria | 31880 |
| 79 | Ga0105242_10091240 | 3300009176 | Bacteria | 2564 |
| 80 | Ga0105237_10000780 | 3300009545 | Bacteria | 43609 |
| 81 | Ga0105237_10001360 | 3300009545 | Bacteria | 32389 |
| 82 | Ga0105249_10002494 | 3300009553 | Bacteria | 15946 |
| 83 | Ga0105249_10006698 | 3300009553 | Bacteria | 10035 |
| 84 | Ga0105249_10022635 | 3300009553 | Bacteria | 5630 |
| 85 | Ga0105249_10064502 | 3300009553 | Bacteria | 3368 |
| 86 | Ga0105249_10276999 | 3300009553 | Bacteria | 1673 |
| 87 | Ga0105239_10020869 | 3300010375 | Bacteria | 7227 |
| 88 | Ga0105239_10099179 | 3300010375 | Bacteria | 3220 |
| 89 | Ga0157373_10001613 | 3300013100 | Bacteria | 17234 |
| 90 | Ga0157370_10022212 | 3300013104 | Bacteria | 6313 |
| 91 | Ga0157370_10273942 | 3300013104 | Bacteria | 1559 |
| 92 | Ga0157370_10431863 | 3300013104 | Bacteria | 1211 |
| 93 | Ga0157374_10164358 | 3300013296 | Bacteria | 2163 |
| 94 | Ga0157378_10000837 | 3300013297 | Bacteria | 28570 |
| 95 | Ga0157378_10303943 | 3300013297 | Bacteria | 1545 |
| 96 | Ga0163162_10056925 | 3300013306 | Bacteria | 3937 |
| 97 | Ga0157372_10001243 | 3300013307 | Bacteria | 27548 |
| 98 | Ga0157375_10186656 | 3300013308 | Bacteria | 2227 |
| 99 | Ga0157375_10251826 | 3300013308 | Bacteria | 1927 |
| 100 | Ga0157375_10475911 | 3300013308 | Bacteria | 1414 |
| 101 | Ga0163163_10128569 | 3300014325 | Bacteria | 2572 |
| 102 | Ga0157380_10062589 | 3300014326 | Bacteria | 2981 |
| 103 | Ga0157377_10000326 | 3300014745 | Bacteria | 21427 |
| 104 | Ga0157379_10237072 | 3300014968 | Bacteria | 1654 |
| 105 | Ga0157376_10002459 | 3300014969 | Bacteria | 12523 |
| 106 | Ga0182006_1008402 | 3300015261 | Bacteria | 4677 |
| 107 | Ga0209760_100004 | 3300025207 | Bacteria | 254650 |
| 108 | Ga0209784_100001 | 3300025224 | Bacteria | 3600592 |
| 109 | Ga0209566_100001 | 3300025225 | Bacteria | 3600765 |
| 110 | Ga0209674_100002 | 3300025226 | Bacteria | 3600592 |
| 111 | Ga0209563_100002 | 3300025230 | Bacteria | 2045675 |
| 112 | Ga0207427_100012 | 3300025231 | Bacteria | 585657 |
| 113 | Ga0209437_100001 | 3300025233 | Bacteria | 2045675 |
| 114 | Ga0209677_100002 | 3300025253 | Bacteria | 2045675 |
| 115 | Ga0209233_1001249 | 3300025261 | Bacteria | 10221 |
| 116 | Ga0207656_10033354 | 3300025321 | Unclassified | 2144 |
| 117 | Ga0207696_1000001 | 3300025711 | Bacteria | 2579611 |
| 118 | Ga0207696_1000013 | 3300025711 | Bacteria | 524881 |
| 119 | Ga0207696_1000021 | 3300025711 | Bacteria | 432606 |
| 120 | Ga0207696_1002364 | 3300025711 | Bacteria | 9325 |
| 121 | Ga0207655_1000604 | 3300025728 | Bacteria | 43480 |
| 122 | Ga0207710_10000150 | 3300025900 | Bacteria | 79270 |
| 123 | Ga0207710_10001075 | 3300025900 | Bacteria | 14094 |
| 124 | Ga0207688_10094155 | 3300025901 | Bacteria | 1723 |
| 125 | Ga0207680_10000177 | 3300025903 | Bacteria | 30942 |
| 126 | Ga0207647_10043694 | 3300025904 | Bacteria | 2802 |
| 127 | Ga0207645_10012877 | 3300025907 | Bacteria | 5661 |
| 128 | Ga0207654_10021965 | 3300025911 | Bacteria | 3399 |
| 129 | Ga0207695_10028280 | 3300025913 | Bacteria | 6223 |
| 130 | Ga0207671_10001772 | 3300025914 | Bacteria | 24259 |
| 131 | Ga0207671_10001776 | 3300025914 | Bacteria | 24234 |
| 132 | Ga0207700_10157525 | 3300025928 | Unclassified | 1883 |
| 133 | Ga0207706_10100828 | 3300025933 | Bacteria | 2540 |
| 134 | Ga0207686_10243237 | 3300025934 | Bacteria | 1311 |
| 135 | Ga0207670_10049622 | 3300025936 | Bacteria | 2809 |
| 136 | Ga0207670_10188233 | 3300025936 | Bacteria | 1560 |
| 137 | Ga0207669_10005225 | 3300025937 | Bacteria | 5803 |
| 138 | Ga0207691_10024662 | 3300025940 | Bacteria | 5656 |
| 139 | Ga0207691_10106716 | 3300025940 | Bacteria | 2494 |
| 140 | Ga0207689_10002959 | 3300025942 | Bacteria | 15685 |
| 141 | Ga0207689_10033235 | 3300025942 | Bacteria | 4286 |
| 142 | Ga0207651_10295078 | 3300025960 | Bacteria | 1346 |
| 143 | Ga0207712_10002851 | 3300025961 | Bacteria | 11074 |
| 144 | Ga0207712_10014253 | 3300025961 | Bacteria | 5107 |
| 145 | Ga0207712_10057933 | 3300025961 | Bacteria | 2735 |
| 146 | Ga0207668_10071659 | 3300025972 | Unclassified | 2476 |
| 147 | Ga0207658_10009094 | 3300025986 | Bacteria | 6736 |
| 148 | Ga0207703_10005218 | 3300026035 | Bacteria | 10497 |
| 149 | Ga0207639_10002436 | 3300026041 | Bacteria | 12511 |
| 150 | Ga0207708_10064220 | 3300026075 | Bacteria | 2804 |
| 151 | Ga0207708_10328710 | 3300026075 | Bacteria | 1249 |
| 152 | Ga0207702_10434742 | 3300026078 | Bacteria | 1271 |
| 153 | Ga0207641_10000090 | 3300026088 | Bacteria | 127735 |
| 154 | Ga0207648_10067377 | 3300026089 | Bacteria | 3121 |
| 155 | Ga0207676_10025338 | 3300026095 | Bacteria | 4401 |
| 156 | Ga0207676_10037352 | 3300026095 | Bacteria | 3701 |
| 157 | Ga0207674_10010063 | 3300026116 | Bacteria | 10754 |
| 158 | Ga0207674_10176547 | 3300026116 | Bacteria | 2088 |
| 159 | Ga0207674_10348428 | 3300026116 | Bacteria | 1432 |
| 160 | Ga0207675_100014194 | 3300026118 | Bacteria | 7429 |
| 161 | Ga0207698_10002371 | 3300026142 | Bacteria | 11172 |
| 162 | Ga0207698_10226561 | 3300026142 | Bacteria | 1693 |
| 163 | Ga0209281_1001285 | 3300027111 | Bacteria | 16101 |
| 164 | Ga0209371_1010098 | 3300027312 | Bacteria | 2938 |
| 165 | Ga0209968_1002839 | 3300027526 | Bacteria | 2600 |
| 166 | Ga0209974_10041338 | 3300027876 | Bacteria | 1535 |
| 167 | Ga0268264_10002720 | 3300028381 | Bacteria | 15431 |
| 168 | Ga0268256_1010791 | 3300030500 | Bacteria | 2938 |
| 169 | Ga0265340_10025422 | 3300031247 | Bacteria | 2999 |
| 170 | Ga0265313_10029326 | 3300031595 | Bacteria | 2848 |
| 171 | Ga0307405_10000005 | 3300031731 | Bacteria | 376536 |
| 172 | Ga0307406_10007936 | 3300031901 | Bacteria | 5911 |
| 173 | Ga0451802_1131890 | 3300041460 | Unclassified | 1106 |
| 174 | Ga0495627_000018 | 3300046453 | Bacteria | 315125 |
| 175 | Ga0495627_006930 | 3300046453 | Bacteria | 4400 |
| 176 | Ga0495632_0127690 | 3300046519 | Bacteria | 1185 |
| 177 | Ga0495589_0000002 | 3300046794 | Bacteria | 758846 |
| 178 | Ga0495660_0000004 | 3300046810 | Bacteria | 1003183 |
| 179 | Ga0495686_0140484 | 3300047472 | Bacteria | 1425 |
| 180 | Ga0496104_0032385 | 3300048907 | Bacteria | 4865 |
| 181 | Ga0496116_0000023 | 3300048919 | Bacteria | 475792 |
| 182 | Ga0496116_0000024 | 3300048919 | Bacteria | 471420 |
| 183 | Ga0496116_0000094 | 3300048919 | Bacteria | 205588 |
| 184 | Ga0496117_0001233 | 3300048920 | Bacteria | 38319 |
| 185 | Ga0496117_0003978 | 3300048920 | Bacteria | 16704 |
| 186 | Ga0496118_0001957 | 3300048921 | Bacteria | 29198 |
| 187 | Ga0496118_0010446 | 3300048921 | Bacteria | 9196 |
| 188 | Ga0496119_0003196 | 3300048922 | Bacteria | 17171 |
| 189 | Ga0496119_0006208 | 3300048922 | Bacteria | 11174 |
| 190 | Ga0496120_0002259 | 3300048923 | Bacteria | 20058 |
| 191 | Ga0496120_0002703 | 3300048923 | Bacteria | 17378 |
| 192 | Ga0496121_0111183 | 3300048924 | Bacteria | 2090 |
| 193 | Ga0496123_0108540 | 3300048926 | Bacteria | 1593 |
| 194 | Ga0496124_0010582 | 3300048927 | Bacteria | 9325 |
| 195 | Ga0496124_0024605 | 3300048927 | Bacteria | 5470 |
| 196 | Ga0496125_0000013 | 3300048928 | Bacteria | 628761 |
| 197 | Ga0496126_0000276 | 3300048929 | Bacteria | 108459 |
| 198 | Ga0501334_01813 | 3300049550 | Bacteria | 1221 |
| 199 | Ga0501032_0000420 | 3300049569 | Bacteria | 35147 |
| 200 | Ga0501034_0044230 | 3300049571 | Bacteria | 4504 |
| 201 | Ga0501034_0225010 | 3300049571 | Bacteria | 1827 |
| 202 | Ga0501036_0031161 | 3300049572 | Bacteria | 4506 |
| 203 | Ga0501043_0207727 | 3300049579 | Bacteria | 1518 |
| 204 | Ga0501035_0003468 | 3300049822 | Bacteria | 15100 |
| 205 | Ga0501044_0528777 | 3300049823 | Bacteria | 1078 |
| 206 | nmdc:mga0k408_110218_c1 | 3300050493 | Bacteria | 1627 |
| 207 | nmdc:mga08y16_59571_c1 | 3300050511 | Bacteria | 3987 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300025934 | Ga0207686_10243237 | Ga0207686_102432372 | 237 |
| 2 | 3300005289 | Ga0065704_10073181 | Ga0065704_100731815 | 258 |
| 3 | 3300013307 | Ga0157372_10001243 | Ga0157372_1000124311 | 261 |
| 4 | iso_pu_bacteria | 2919509842 | 2919512731 | 270 |
| 5 | 3300003320 | rootH2_10142284 | rootH2_101422842 | 271 |
| 6 | 3300041460 | Ga0451802_1131890 | Ga0451802_1131890_10_837 | 271 |
| 7 | 3300046453 | Ga0495627_006930 | Ga0495627_006930_75_905 | 271 |
| 8 | iso_pu_bacteria | 2881247448 | 2881248892 | 271 |
| 9 | 3300049569 | Ga0501032_0000420 | Ga0501032_0000420_30470_31294 | 272 |
| 10 | 3300049571 | Ga0501034_0044230 | Ga0501034_0044230_3078_3902 | 272 |
| 11 | 3300049571 | Ga0501034_0225010 | Ga0501034_0225010_975_1799 | 272 |
| 12 | iso_pu_bacteria | 2965320100 | 2965321195 | 273 |
| 13 | 3300005289 | Ga0065704_10211214 | Ga0065704_102112141 | 275 |
| 14 | 3300013104 | Ga0157370_10273942 | Ga0157370_102739422 | 275 |
| 15 | 3300013104 | Ga0157370_10431863 | Ga0157370_104318632 | 275 |
| 16 | 3300046519 | Ga0495632_0127690 | Ga0495632_0127690_47_931 | 275 |
| 17 | 3300047472 | Ga0495686_0140484 | Ga0495686_0140484_365_1270 | 275 |
| 18 | 3300009092 | Ga0105250_10011005 | Ga0105250_100110053 | 276 |
| 19 | 3300048919 | Ga0496116_0000024 | Ga0496116_0000024_145375_146220 | 276 |
| 20 | 3300049572 | Ga0501036_0031161 | Ga0501036_0031161_417_1259 | 276 |
| 21 | 3300049579 | Ga0501043_0207727 | Ga0501043_0207727_593_1435 | 276 |
| 22 | 3300049822 | Ga0501035_0003468 | Ga0501035_0003468_1949_2791 | 276 |
| 23 | 3300049823 | Ga0501044_0528777 | Ga0501044_0528777_51_893 | 276 |
| 24 | 3300049550 | Ga0501334_01813 | Ga0501334_01813_292_1140 | 277 |
| 25 | iso_pu_bacteria | 2896344016 | 2896344705 | 277 |
| 26 | 3300027526 | Ga0209968_1002839 | Ga0209968_10028392 | 278 |
| 27 | 3300027876 | Ga0209974_10041338 | Ga0209974_100413382 | 278 |
| 28 | iso_pu_bacteria | 2537561728 | 2538427427 | 278 |
| 29 | iso_pu_bacteria | 2855195626 | 2855199394 | 278 |
| 30 | iso_pu_bacteria | 2890737413 | 2890738885 | 278 |
| 31 | iso_pu_bacteria | 2900051742 | 2900055671 | 278 |
| 32 | 3300003323 | rootH1_10301502 | rootH1_103015021 | 279 |
| 33 | 3300009545 | Ga0105237_10000780 | Ga0105237_1000078023 | 279 |
| 34 | 3300025914 | Ga0207671_10001772 | Ga0207671_100017727 | 279 |
| 35 | 3300025928 | Ga0207700_10157525 | Ga0207700_101575252 | 279 |
| 36 | 3300050493 | nmdc:mga0k408_110218_c1 | nmdc:mga0k408_110218_c1_58_963 | 279 |
| 37 | iso_pu_bacteria | 2904504865 | 2904507913 | 279 |
| 38 | 3300013296 | Ga0157374_10164358 | Ga0157374_101643582 | 280 |
| 39 | 3300031247 | Ga0265340_10025422 | Ga0265340_100254222 | 280 |
| 40 | 3300031595 | Ga0265313_10029326 | Ga0265313_100293262 | 280 |
| 41 | 3300048926 | Ga0496123_0108540 | Ga0496123_0108540_82_936 | 280 |
| 42 | iso_pu_bacteria | 2554235234 | 2555261292 | 280 |
| 43 | iso_pu_bacteria | 2706794495 | 2707099754 | 280 |
| 44 | 3300005334 | Ga0068869_100004214 | Ga0068869_1000042148 | 281 |
| 45 | 3300005335 | Ga0070666_10000197 | Ga0070666_1000019742 | 281 |
| 46 | 3300005347 | Ga0070668_100022148 | Ga0070668_1000221485 | 281 |
| 47 | 3300005365 | Ga0070688_100281799 | Ga0070688_1002817992 | 281 |
| 48 | 3300005367 | Ga0070667_100372647 | Ga0070667_1003726472 | 281 |
| 49 | 3300005466 | Ga0070685_10125848 | Ga0070685_101258482 | 281 |
| 50 | 3300005543 | Ga0070672_100088817 | Ga0070672_1000888173 | 281 |
| 51 | 3300005544 | Ga0070686_100259343 | Ga0070686_1002593431 | 281 |
| 52 | 3300005577 | Ga0068857_100155383 | Ga0068857_1001553833 | 281 |
| 53 | 3300005616 | Ga0068852_100004067 | Ga0068852_1000040679 | 281 |
| 54 | 3300005617 | Ga0068859_100000007 | Ga0068859_100000007190 | 281 |
| 55 | 3300005617 | Ga0068859_100027384 | Ga0068859_1000273844 | 281 |
| 56 | 3300005618 | Ga0068864_100018022 | Ga0068864_1000180223 | 281 |
| 57 | 3300005618 | Ga0068864_100036579 | Ga0068864_1000365793 | 281 |
| 58 | 3300005841 | Ga0068863_100000444 | Ga0068863_10000044410 | 281 |
| 59 | 3300005842 | Ga0068858_100002218 | Ga0068858_1000022182 | 281 |
| 60 | 3300005843 | Ga0068860_100000661 | Ga0068860_1000006614 | 281 |
| 61 | 3300006237 | Ga0097621_100023411 | Ga0097621_1000234115 | 281 |
| 62 | 3300006358 | Ga0068871_100061725 | Ga0068871_1000617252 | 281 |
| 63 | 3300006881 | Ga0068865_100129431 | Ga0068865_1001294312 | 281 |
| 64 | 3300006931 | Ga0097620_100000007 | Ga0097620_100000007191 | 281 |
| 65 | 3300006931 | Ga0097620_100027383 | Ga0097620_1000273834 | 281 |
| 66 | 3300009101 | Ga0105247_10001984 | Ga0105247_1000198414 | 281 |
| 67 | 3300009101 | Ga0105247_10011720 | Ga0105247_100117204 | 281 |
| 68 | 3300009174 | Ga0105241_10000424 | Ga0105241_1000042431 | 281 |
| 69 | 3300009545 | Ga0105237_10001360 | Ga0105237_1000136028 | 281 |
| 70 | 3300009553 | Ga0105249_10002494 | Ga0105249_100024944 | 281 |
| 71 | 3300009553 | Ga0105249_10006698 | Ga0105249_100066985 | 281 |
| 72 | 3300009553 | Ga0105249_10022635 | Ga0105249_100226355 | 281 |
| 73 | 3300010375 | Ga0105239_10099179 | Ga0105239_100991795 | 281 |
| 74 | 3300013297 | Ga0157378_10303943 | Ga0157378_103039432 | 281 |
| 75 | 3300013308 | Ga0157375_10186656 | Ga0157375_101866563 | 281 |
| 76 | 3300014325 | Ga0163163_10128569 | Ga0163163_101285693 | 281 |
| 77 | 3300014968 | Ga0157379_10237072 | Ga0157379_102370721 | 281 |
| 78 | 3300014969 | Ga0157376_10002459 | Ga0157376_100024599 | 281 |
| 79 | 3300025321 | Ga0207656_10033354 | Ga0207656_100333542 | 281 |
| 80 | 3300025900 | Ga0207710_10001075 | Ga0207710_100010753 | 281 |
| 81 | 3300025903 | Ga0207680_10000177 | Ga0207680_1000017730 | 281 |
| 82 | 3300025904 | Ga0207647_10043694 | Ga0207647_100436942 | 281 |
| 83 | 3300025911 | Ga0207654_10021965 | Ga0207654_100219652 | 281 |
| 84 | 3300025914 | Ga0207671_10001776 | Ga0207671_1000177610 | 281 |
| 85 | 3300025940 | Ga0207691_10106716 | Ga0207691_101067163 | 281 |
| 86 | 3300025942 | Ga0207689_10002959 | Ga0207689_1000295912 | 281 |
| 87 | 3300025961 | Ga0207712_10002851 | Ga0207712_1000285111 | 281 |
| 88 | 3300025961 | Ga0207712_10014253 | Ga0207712_100142534 | 281 |
| 89 | 3300025972 | Ga0207668_10071659 | Ga0207668_100716592 | 281 |
| 90 | 3300025986 | Ga0207658_10009094 | Ga0207658_100090946 | 281 |
| 91 | 3300026035 | Ga0207703_10005218 | Ga0207703_1000521810 | 281 |
| 92 | 3300026088 | Ga0207641_10000090 | Ga0207641_1000009030 | 281 |
| 93 | 3300026095 | Ga0207676_10025338 | Ga0207676_100253383 | 281 |
| 94 | 3300026095 | Ga0207676_10037352 | Ga0207676_100373523 | 281 |
| 95 | 3300026116 | Ga0207674_10176547 | Ga0207674_101765472 | 281 |
| 96 | 3300026116 | Ga0207674_10348428 | Ga0207674_103484282 | 281 |
| 97 | 3300026142 | Ga0207698_10002371 | Ga0207698_100023714 | 281 |
| 98 | 3300028381 | Ga0268264_10002720 | Ga0268264_1000272013 | 281 |
| 99 | iso_pu_bacteria | 2602042067 | 2603705182 | 281 |
| 100 | 3300003322 | rootL2_10025523 | rootL2_100255232 | 282 |
| 101 | 3300026078 | Ga0207702_10434742 | Ga0207702_104347422 | 282 |
| 102 | iso_pu_bacteria | 2654587920 | 2656279031 | 282 |
| 103 | iso_pu_bacteria | 2687453601 | 2689444112 | 282 |
| 104 | 3300005364 | Ga0070673_100052798 | Ga0070673_1000527983 | 283 |
| 105 | 3300005365 | Ga0070688_100146661 | Ga0070688_1001466612 | 283 |
| 106 | 3300005457 | Ga0070662_100038988 | Ga0070662_1000389882 | 283 |
| 107 | 3300005539 | Ga0068853_100023760 | Ga0068853_1000237605 | 283 |
| 108 | 3300005577 | Ga0068857_100065258 | Ga0068857_1000652582 | 283 |
| 109 | 3300005617 | Ga0068859_100036095 | Ga0068859_1000360954 | 283 |
| 110 | 3300005719 | Ga0068861_100097906 | Ga0068861_1000979062 | 283 |
| 111 | 3300006195 | Ga0075366_10014977 | Ga0075366_100149774 | 283 |
| 112 | 3300006931 | Ga0097620_100036096 | Ga0097620_1000360964 | 283 |
| 113 | 3300009011 | Ga0105251_10021563 | Ga0105251_100215634 | 283 |
| 114 | 3300009092 | Ga0105250_10000002 | Ga0105250_10000002319 | 283 |
| 115 | 3300009092 | Ga0105250_10000101 | Ga0105250_1000010149 | 283 |
| 116 | 3300009094 | Ga0111539_10004778 | Ga0111539_100047783 | 283 |
| 117 | 3300009553 | Ga0105249_10064502 | Ga0105249_100645022 | 283 |
| 118 | 3300013306 | Ga0163162_10056925 | Ga0163162_100569252 | 283 |
| 119 | 3300013308 | Ga0157375_10475911 | Ga0157375_104759112 | 283 |
| 120 | 3300014326 | Ga0157380_10062589 | Ga0157380_100625893 | 283 |
| 121 | 3300014745 | Ga0157377_10000326 | Ga0157377_1000032622 | 283 |
| 122 | 3300025711 | Ga0207696_1000013 | Ga0207696_1000013136 | 283 |
| 123 | 3300025711 | Ga0207696_1000021 | Ga0207696_1000021189 | 283 |
| 124 | 3300025933 | Ga0207706_10100828 | Ga0207706_101008283 | 283 |
| 125 | 3300025936 | Ga0207670_10049622 | Ga0207670_100496223 | 283 |
| 126 | 3300025960 | Ga0207651_10295078 | Ga0207651_102950782 | 283 |
| 127 | 3300025961 | Ga0207712_10057933 | Ga0207712_100579332 | 283 |
| 128 | 3300026075 | Ga0207708_10328710 | Ga0207708_103287101 | 283 |
| 129 | 3300026089 | Ga0207648_10067377 | Ga0207648_100673773 | 283 |
| 130 | 3300026116 | Ga0207674_10010063 | Ga0207674_100100639 | 283 |
| 131 | 3300026118 | Ga0207675_100014194 | Ga0207675_1000141944 | 283 |
| 132 | iso_pu_bacteria | 2506520007 | 2506577631 | 283 |
| 133 | iso_pu_bacteria | 2506520008 | 2506582769 | 283 |
| 134 | iso_pu_bacteria | 2508501071 | 2508851567 | 283 |
| 135 | iso_pu_bacteria | 2937967321 | 2937969894 | 283 |
| 136 | 3300005289 | Ga0065704_10072412 | Ga0065704_100724124 | 284 |
| 137 | 3300005330 | Ga0070690_100032268 | Ga0070690_1000322681 | 284 |
| 138 | 3300005334 | Ga0068869_100261859 | Ga0068869_1002618593 | 284 |
| 139 | 3300005338 | Ga0068868_100112744 | Ga0068868_1001127444 | 284 |
| 140 | 3300005347 | Ga0070668_100016532 | Ga0070668_1000165323 | 284 |
| 141 | 3300005353 | Ga0070669_100012601 | Ga0070669_1000126016 | 284 |
| 142 | 3300005355 | Ga0070671_100052393 | Ga0070671_1000523931 | 284 |
| 143 | 3300005356 | Ga0070674_100029109 | Ga0070674_1000291094 | 284 |
| 144 | 3300005364 | Ga0070673_100011492 | Ga0070673_1000114926 | 284 |
| 145 | 3300005539 | Ga0068853_100004753 | Ga0068853_1000047532 | 284 |
| 146 | 3300005543 | Ga0070672_100042434 | Ga0070672_1000424341 | 284 |
| 147 | 3300005578 | Ga0068854_100148526 | Ga0068854_1001485262 | 284 |
| 148 | 3300005615 | Ga0070702_100002362 | Ga0070702_1000023628 | 284 |
| 149 | 3300005718 | Ga0068866_10103074 | Ga0068866_101030742 | 284 |
| 150 | 3300005719 | Ga0068861_100011938 | Ga0068861_1000119383 | 284 |
| 151 | 3300005842 | Ga0068858_100205784 | Ga0068858_1002057842 | 284 |
| 152 | 3300005844 | Ga0068862_100046968 | Ga0068862_1000469683 | 284 |
| 153 | 3300006358 | Ga0068871_100324252 | Ga0068871_1003242522 | 284 |
| 154 | 3300006881 | Ga0068865_100299933 | Ga0068865_1002999331 | 284 |
| 155 | 3300009176 | Ga0105242_10091240 | Ga0105242_100912402 | 284 |
| 156 | 3300009553 | Ga0105249_10276999 | Ga0105249_102769992 | 284 |
| 157 | 3300010375 | Ga0105239_10020869 | Ga0105239_100208695 | 284 |
| 158 | 3300013104 | Ga0157370_10022212 | Ga0157370_100222125 | 284 |
| 159 | 3300013297 | Ga0157378_10000837 | Ga0157378_100008375 | 284 |
| 160 | 3300013308 | Ga0157375_10251826 | Ga0157375_102518261 | 284 |
| 161 | 3300015261 | Ga0182006_1008402 | Ga0182006_10084022 | 284 |
| 162 | 3300025901 | Ga0207688_10094155 | Ga0207688_100941553 | 284 |
| 163 | 3300025907 | Ga0207645_10012877 | Ga0207645_100128772 | 284 |
| 164 | 3300025913 | Ga0207695_10028280 | Ga0207695_100282804 | 284 |
| 165 | 3300025936 | Ga0207670_10188233 | Ga0207670_101882332 | 284 |
| 166 | 3300025937 | Ga0207669_10005225 | Ga0207669_100052254 | 284 |
| 167 | 3300025940 | Ga0207691_10024662 | Ga0207691_100246626 | 284 |
| 168 | 3300025942 | Ga0207689_10033235 | Ga0207689_100332354 | 284 |
| 169 | 3300026041 | Ga0207639_10002436 | Ga0207639_100024362 | 284 |
| 170 | 3300026075 | Ga0207708_10064220 | Ga0207708_100642203 | 284 |
| 171 | 3300026142 | Ga0207698_10226561 | Ga0207698_102265612 | 284 |
| 172 | 3300031731 | Ga0307405_10000005 | Ga0307405_10000005173 | 284 |
| 173 | 3300031901 | Ga0307406_10007936 | Ga0307406_100079364 | 284 |
| 174 | 3300048922 | Ga0496119_0003196 | Ga0496119_0003196_5986_6843 | 284 |
| 175 | 3300048923 | Ga0496120_0002259 | Ga0496120_0002259_13255_14112 | 284 |
| 176 | 3300048924 | Ga0496121_0111183 | Ga0496121_0111183_364_1233 | 284 |
| 177 | 3300050511 | nmdc:mga08y16_59571_c1 | nmdc:mga08y16_59571_c1_2276_3163 | 284 |
| 178 | 3300027312 | Ga0209371_1010098 | Ga0209371_10100984 | 285 |
| 179 | 3300030500 | Ga0268256_1010791 | Ga0268256_10107914 | 285 |
| 180 | 3300006946 | Ga0079104_1001448 | Ga0079104_100144811 | 286 |
| 181 | 3300013100 | Ga0157373_10001613 | Ga0157373_1000161311 | 286 |
| 182 | 3300027111 | Ga0209281_1001285 | Ga0209281_100128511 | 286 |
| 183 | 3300048927 | Ga0496124_0024605 | Ga0496124_0024605_883_1746 | 286 |
| 184 | iso_pu_bacteria | 2904474040 | 2904475572 | 286 |
| 185 | iso_pu_bacteria | 2919150387 | 2919151741 | 286 |
| 186 | iso_pu_bacteria | 2927143783 | 2927144410 | 286 |
| 187 | 3300009092 | Ga0105250_10000859 | Ga0105250_100008599 | 287 |
| 188 | 3300009101 | Ga0105247_10000025 | Ga0105247_10000025104 | 287 |
| 189 | 3300025711 | Ga0207696_1000001 | Ga0207696_1000001422 | 287 |
| 190 | 3300025900 | Ga0207710_10000150 | Ga0207710_1000015018 | 287 |
| 191 | 3300046453 | Ga0495627_000018 | Ga0495627_000018_184539_185405 | 287 |
| 192 | 3300046794 | Ga0495589_0000002 | Ga0495589_0000002_230783_231649 | 287 |
| 193 | 3300048919 | Ga0496116_0000023 | Ga0496116_0000023_323174_324040 | 287 |
| 194 | 3300048920 | Ga0496117_0001233 | Ga0496117_0001233_35714_36580 | 287 |
| 195 | 3300048921 | Ga0496118_0001957 | Ga0496118_0001957_7737_8603 | 287 |
| 196 | 3300006946 | Ga0079104_1001448 | Ga0079104_10014488 | 289 |
| 197 | 3300013100 | Ga0157373_10001613 | Ga0157373_100016138 | 289 |
| 198 | 3300027111 | Ga0209281_1001285 | Ga0209281_10012858 | 289 |
| 199 | 2162886007 | SwRhRL2b_contig_3708624 | SwRhRL2b_0187.00003330 | 290 |
| 200 | 3300002737 | JGI25162J39368_1000019 | JGI25162J39368_1000019178 | 290 |
| 201 | 3300002771 | JGI25163J39215_1000121 | JGI25163J39215_100012124 | 290 |
| 202 | 3300002772 | JGI25164J39214_1000011 | JGI25164J39214_100001196 | 290 |
| 203 | 3300003751 | Ga0055538_1000021 | Ga0055538_100002196 | 290 |
| 204 | 3300003752 | Ga0055539_1000026 | Ga0055539_1000026178 | 290 |
| 205 | 3300003756 | Ga0055533_1000035 | Ga0055533_100003596 | 290 |
| 206 | 3300003759 | Ga0055525_1000045 | Ga0055525_100004596 | 290 |
| 207 | 3300003841 | Ga0055541_1000020 | Ga0055541_100002096 | 290 |
| 208 | 3300005289 | Ga0065704_10000708 | Ga0065704_1000070841 | 290 |
| 209 | 3300009036 | Ga0105244_10000636 | Ga0105244_100006365 | 290 |
| 210 | 3300009092 | Ga0105250_10002451 | Ga0105250_100024512 | 290 |
| 211 | 3300025207 | Ga0209760_100004 | Ga0209760_10000494 | 290 |
| 212 | 3300025224 | Ga0209784_100001 | Ga0209784_1000012495 | 290 |
| 213 | 3300025225 | Ga0209566_100001 | Ga0209566_1000012495 | 290 |
| 214 | 3300025226 | Ga0209674_100002 | Ga0209674_1000022495 | 290 |
| 215 | 3300025230 | Ga0209563_100002 | Ga0209563_1000021030 | 290 |
| 216 | 3300025231 | Ga0207427_100012 | Ga0207427_100012321 | 290 |
| 217 | 3300025233 | Ga0209437_100001 | Ga0209437_1000011030 | 290 |
| 218 | 3300025253 | Ga0209677_100002 | Ga0209677_1000021030 | 290 |
| 219 | 3300025261 | Ga0209233_1001249 | Ga0209233_10012497 | 290 |
| 220 | 3300025711 | Ga0207696_1002364 | Ga0207696_10023642 | 290 |
| 221 | 3300025728 | Ga0207655_1000604 | Ga0207655_100060414 | 290 |
| 222 | 3300046810 | Ga0495660_0000004 | Ga0495660_0000004_873732_874604 | 290 |
| 223 | 3300048907 | Ga0496104_0032385 | Ga0496104_0032385_974_1846 | 290 |
| 224 | 3300048919 | Ga0496116_0000094 | Ga0496116_0000094_99145_100017 | 290 |
| 225 | 3300048920 | Ga0496117_0003978 | Ga0496117_0003978_2663_3535 | 290 |
| 226 | 3300048921 | Ga0496118_0010446 | Ga0496118_0010446_7082_7954 | 290 |
| 227 | 3300048922 | Ga0496119_0006208 | Ga0496119_0006208_1759_2631 | 290 |
| 228 | 3300048923 | Ga0496120_0002703 | Ga0496120_0002703_2663_3535 | 290 |
| 229 | 3300048927 | Ga0496124_0010582 | Ga0496124_0010582_263_1135 | 290 |
| 230 | 3300048928 | Ga0496125_0000013 | Ga0496125_0000013_295533_296405 | 290 |
| 231 | 3300048929 | Ga0496126_0000276 | Ga0496126_0000276_99396_100268 | 290 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1vl0-assembly1.cif.gz_B | crystal structure of a dtdp-4-dehydrorhamnose reductase, rfbd ortholog (ca_c2315) from clostridium acetobutylicum atcc 824 at 2.05 a resolution | 0.958 | 1 | 284 |
| 3sc6-assembly5.cif.gz_E | 2.65 angstrom resolution crystal structure of dtdp-4-dehydrorhamnose reductase (rfbd) from bacillus anthracis str. ames in complex with nadp | 0.9578 | 2 | 283 |
| 3sc6-assembly6.cif.gz_F | 2.65 angstrom resolution crystal structure of dtdp-4-dehydrorhamnose reductase (rfbd) from bacillus anthracis str. ames in complex with nadp | 0.951 | 2 | 283 |
| 1vl0-assembly1.cif.gz_B | crystal structure of a dtdp-4-dehydrorhamnose reductase, rfbd ortholog (ca_c2315) from clostridium acetobutylicum atcc 824 at 2.05 a resolution | 0.9479 | 1 | 284 |
| 8ctr-assembly4.cif.gz_D | crystal structure of dtdp-4-dehydrorhamnose reductase from klebsiella pneumoniae with bound nadp | 0.9437 | 1 | 286 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3sc6D01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9553 | 2 | 209 | 3.40.50.720 |
| 1vl0B01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9552 | 3 | 209 | 3.40.50.720 |
| 1kc0A00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9194 | 1 | 285 | 3.40.50.720 |
| 4wpgA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9133 | 2 | 270 | 3.40.50.720 |
| 1kc0A00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9013 | 1 | 285 | 3.40.50.720 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A426IMG3-F1-model_v4 | deleted | 0.9875 | 1 | 280 |
|
| AF-A0A7C3DVI0-F1-model_v4 | dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) | 0.9874 | 2 | 194 |
GO:0005829
GO:0008831 GO:0019305 GO:0045226 |
| AF-A0A427KAC9-F1-model_v4 | dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) | 0.9866 | 1 | 288 |
GO:0005829
GO:0008831 GO:0009243 GO:0019305 GO:0045226 |
| AF-A0A3C1NWN2-F1-model_v4 | deleted | 0.9861 | 2 | 177 |
|
| AF-A0A4Q5RFF9-F1-model_v4 | dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) | 0.9859 | 1 | 224 |
GO:0005829
GO:0008831 GO:0019305 GO:0045226 |
Predicted Structure (AlphaFold2)
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