F343468

General Info

Members Datasets Scaffolds Average Seq Length
230 183 460 683

Family's Representative Sequence

Representative Sequence 3300049590|Ga0501074_0077445|Ga0501074_0077445_106_2304
Length 732
Sequence VSAVHGCTAHGTTKITAASPLENRTLTLYIFHDDRPPSGYPAMTDNPLLRPYTTPYGLPPFDAIRPEHFRPAFDAAMAEQKAAIAAIIAAGAASFDNTIVAMEKSGMMLERVAAAFFTLAGTNSNDEIEAIERDIAPVLSRHGSQIFLDAQLFARVDGLHRKRGRLGLGPEQLRLLERYHTIFVRSGAMLDASGKERLAEINERLASLGTVFSQNVLADEKAWQLVLDGPDDLAGLPDWLVAAAGQAAEDAGLAGKHVITLSRSSIEPFLHFSSRRDLREKALAAWIRRGENGGATDNRAIMAETIELRAERARLLGYESFAHFQLADTMAKSPGTAIDLLNSVWTAGRDRAAAEAGELQALIAEEGGNFELAACDWRYYAEKVRKRRFDFDSAELKPYLQLEKMIEAAFYTADRLFGLSFEELHGMPVHHPDVRVWKVGGRGGGLVGLFVADYFARPSKRSGAWMNALREQHRLAGEVRPIVVNVMSFSKPPAGKPALLSFDDARTLFHEFGHGLHGLLSDVTYPLLAGTSVARDFVELPSQLYEHWLERPEILSKFAVHAETGAPMPAALLEKVLDARTFNQGFATVEYTSSALVDMDLHLLPSGKDVDVAGFERGVLERIGMPPAIGMRHRTPHFQHIFSGDGYAAAYYSYLWSEVLDADAFDAFEEAGDVFDPATAKRLKEFVYAAGNLRDPAEAYRRFRGRAPDPQALLRKRGLETLTGVGDTRAAG

Samples

Sample ID Description Type Environment
1 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
4 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
15 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
16 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
17 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
18 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
19 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
20 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
21 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
22 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
23 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
24 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
25 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
28 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
29 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
30 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
31 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
32 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
33 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
34 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
35 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
36 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
37 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
45 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
46 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
47 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
48 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
49 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
50 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
51 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
52 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
53 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
54 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
55 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
56 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
57 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
58 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
59 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
60 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
61 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
62 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
63 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
64 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
65 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
66 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
67 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
68 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
69 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
70 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
71 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
72 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
73 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
74 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
75 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
76 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
77 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
78 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
79 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
80 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
81 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
82 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
83 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
84 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
85 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
86 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
87 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
88 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
89 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
90 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
91 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
92 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
93 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
94 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
95 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
96 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
97 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
98 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
112 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
113 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
114 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
115 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
116 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
117 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
118 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
119 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
120 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
121 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
122 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
123 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
126 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
127 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
128 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
129 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
130 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
131 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
132 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
133 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
134 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
135 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
136 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
137 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
138 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
139 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
140 2508501050 Microvirga lupini Lut6 Isolate Nodule
141 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
142 2511231027 Phyllobacterium sp. YR531 Isolate Rhizosphere
143 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
144 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
145 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
146 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
147 2643221733 Bosea sp. Root381 Isolate Unclassified
148 2643221734 Bosea sp. Root670 Isolate Unclassified
149 2643221736 Bosea sp. Root483D1 Isolate Unclassified
150 2738541281 Methylobacterium sp. GV094 Isolate Unclassified
151 2738543032 Methylobacterium sp. GV104 Isolate Unclassified
152 2757320392 Phyllobacterium leguminum ORS 1419 Isolate Nodule
153 2773857925 Microvirga vignae BR3299 Isolate Unclassified
154 2775506901 Microvirga ossetica V5/3m Isolate Unclassified
155 2818991467 Bosea vestrisii 3192 Isolate Unclassified
156 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
157 2829745981 Methylorubrum rhodinum DSM 2163 Isolate Rhizosphere
158 2835312727 Microvirga calopogonii CCBAU 65841 Isolate Nodule
159 2841760612 Bosea sp. Tri-49 Isolate Nodule
160 2841911363 Bosea caraganae RCAM04685 Isolate Nodule
161 2841917233 Bosea caraganae RCAM04680 Isolate Nodule
162 2842698319 Methylobacterium sp. R-72139 Isolate Unclassified
163 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
164 2842871566 Phyllobacterium sp. R-73111 Isolate Unclassified
165 2844104063 Bosea sp. Tri-39 Isolate Nodule
166 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
167 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
168 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
169 2851182111 Bosea sp. Tri-44 Isolate Nodule
170 2851246043 Bosea sp. Tri-54 Isolate Nodule
171 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
172 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
173 2884298095 Microvirga thermotolerans HR1 Isolate Rhizosphere
174 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
175 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
176 2902330777 Methylobacterium sp. 2A Isolate Unclassified
177 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
178 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
179 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
180 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
181 641522639 Methylobacterium sp. 4-46 Isolate Nodule
182 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule
183 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 80.87
Metatranscriptomes 0
Isolates 19.13

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.61
Nodule 6.52
Rhizoplane 4.78
Rhizosphere 63.91
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501074_0077445 3300049590 Bacteria 2386
2 JGI25151J46595_10000028 3300003187 Bacteria 208373
3 JGI25151J46595_10000114 3300003187 Bacteria 107534
4 JGI25151J46595_10000124 3300003187 Bacteria 105038
5 Ga0055526_1001215 3300003771 Bacteria 18542
6 Ga0055524_1000020 3300003775 Bacteria 227971
7 Ga0070680_100014811 3300005336 Bacteria 6098
8 Ga0070682_100006019 3300005337 Bacteria 6790
9 Ga0070660_100022806 3300005339 Bacteria 4635
10 Ga0070714_100002716 3300005435 Bacteria 13043
11 Ga0070713_100008386 3300005436 Bacteria 7326
12 Ga0070705_100011435 3300005440 Bacteria 4477
13 Ga0070663_100000240 3300005455 Bacteria 27751
14 Ga0070681_10049605 3300005458 Bacteria 4191
15 Ga0070698_100004260 3300005471 Bacteria 15723
16 Ga0070695_100007885 3300005545 Bacteria 6304
17 Ga0070717_10002673 3300006028 Bacteria 12554
18 Ga0075368_10000645 3300006042 Bacteria 10613
19 Ga0075363_100036420 3300006048 Bacteria 2580
20 Ga0075364_10045954 3300006051 Bacteria 2842
21 Ga0075367_10021520 3300006178 Bacteria 3605
22 Ga0075428_100050982 3300006844 Bacteria 4537
23 Ga0075430_100043193 3300006846 Bacteria 3810
24 Ga0075431_100014477 3300006847 Bacteria 7979
25 Ga0105245_10026143 3300009098 Bacteria 5136
26 Ga0105243_10012109 3300009148 Bacteria 6521
27 Ga0105237_10014463 3300009545 Bacteria 8250
28 Ga0105238_10033759 3300009551 Bacteria 5206
29 Ga0105239_10059663 3300010375 Bacteria 4187
30 Ga0171462_1032 3300013250 Bacteria 98473
31 Ga0157380_10013352 3300014326 Bacteria 5987
32 Ga0157379_10093867 3300014968 Bacteria 2692
33 Ga0209130_1000190 3300025284 Bacteria 86573
34 Ga0209130_1000270 3300025284 Bacteria 65057
35 Ga0209675_1003918 3300025291 Bacteria 6831
36 Ga0209025_1000008 3300025294 Bacteria 1130876
37 Ga0209025_1000705 3300025294 Bacteria 56926
38 Ga0209025_1002163 3300025294 Bacteria 21889
39 Ga0209564_1000049 3300025295 Bacteria 362075
40 Ga0209564_1000065 3300025295 Bacteria 315205
41 Ga0209256_1000014 3300025299 Bacteria 687409
42 Ga0209256_1000200 3300025299 Bacteria 112931
43 Ga0207426_1004849 3300025302 Bacteria 6374
44 Ga0207647_10008948 3300025904 Bacteria 7135
45 Ga0207707_10026249 3300025912 Bacteria 5093
46 Ga0207707_10058064 3300025912 Bacteria 3368
47 Ga0207693_10000701 3300025915 Bacteria 30084
48 Ga0207693_10019659 3300025915 Bacteria 5371
49 Ga0207660_10003820 3300025917 Bacteria 9815
50 Ga0207694_10025979 3300025924 Bacteria 4453
51 Ga0207678_10000440 3300026067 Bacteria 37762
52 Ga0207674_10036438 3300026116 Bacteria 5125
53 Ga0265338_10001571 3300028800 Bacteria 36846
54 Ga0265330_10012795 3300031235 Bacteria 3916
55 Ga0265325_10005486 3300031241 Bacteria 7826
56 Ga0265340_10003996 3300031247 Bacteria 8287
57 Ga0265327_10001216 3300031251 Bacteria 34696
58 Ga0265316_10022582 3300031344 Bacteria 5299
59 Ga0265313_10000522 3300031595 Bacteria 40272
60 Ga0265314_10044967 3300031711 Bacteria 3124
61 Ga0265342_10038396 3300031712 Bacteria 2916
62 Ga0373954_0008128 3300035118 Bacteria 4597
63 Ga0373933_0030732 3300035724 Bacteria 3111
64 Ga0373937_0011743 3300036401 Bacteria 7682
65 Ga0373937_0020232 3300036401 Bacteria 5965
66 Ga0373925_0034853 3300037068 Bacteria 3711
67 Ga0395900_0027447 3300037418 Bacteria 5832
68 Ga0395898_0054927 3300037466 Bacteria 3885
69 Ga0395898_0117098 3300037466 Bacteria 2553
70 Ga0436364_0776232 3300037853 Bacteria 8092
71 Ga0436360_1302493 3300039438 Bacteria 5555
72 Ga0436361_0779965 3300039447 Bacteria 2214
73 Ga0436362_0132450 3300039453 Bacteria 5048
74 Ga0439435_0003529 3300042436 Bacteria 3266
75 Ga0466968_0004326 3300044735 Bacteria 5304
76 Ga0495592_0006814 3300046454 Bacteria 8528
77 Ga0495651_0000870 3300046462 Bacteria 23462
78 Ga0495653_0002078 3300046463 Bacteria 15755
79 Ga0495608_0003489 3300046511 Bacteria 11268
80 Ga0495610_0009610 3300046512 Bacteria 6097
81 Ga0495618_0002411 3300046514 Bacteria 12016
82 Ga0495630_0048870 3300046517 Bacteria 3166
83 Ga0495652_0002942 3300046529 Bacteria 17151
84 Ga0495640_0000375 3300046533 Bacteria 31569
85 Ga0495645_0029739 3300046543 Bacteria 3975
86 Ga0495667_0002793 3300046559 Bacteria 11655
87 Ga0495634_0003901 3300046642 Bacteria 11845
88 Ga0495635_0001372 3300046663 Bacteria 16221
89 Ga0495657_0011880 3300046675 Bacteria 6490
90 Ga0495599_0007428 3300046678 Bacteria 6645
91 Ga0495658_0013461 3300046683 Bacteria 4164
92 Ga0495613_0024328 3300046689 Bacteria 4511
93 Ga0495581_0041407 3300047315 Bacteria 2666
94 Ga0495604_0000434 3300047317 Bacteria 37257
95 Ga0495674_0001933 3300047319 Bacteria 20443
96 Ga0496100_0010249 3300048903 Bacteria 5301
97 Ga0496104_0020373 3300048907 Bacteria 6080
98 Ga0496106_0001470 3300048909 Bacteria 17710
99 Ga0496107_0006500 3300048910 Bacteria 8036
100 Ga0496108_0000941 3300048911 Bacteria 22730
101 Ga0496109_0006158 3300048912 Bacteria 10083
102 Ga0496110_0002897 3300048913 Bacteria 12986
103 Ga0496112_0030772 3300048915 Bacteria 5199
104 Ga0496112_0145209 3300048915 Bacteria 2341
105 Ga0496113_0008768 3300048916 Bacteria 6605
106 Ga0496114_0104718 3300048917 Bacteria 2419
107 Ga0496117_0030197 3300048920 Bacteria 4162
108 Ga0496117_0031300 3300048920 Bacteria 4065
109 Ga0496122_0019384 3300048925 Bacteria 6217
110 Ga0496123_0064789 3300048926 Bacteria 2327
111 Ga0501032_0001217 3300049569 Bacteria 20601
112 Ga0501032_0019640 3300049569 Bacteria 4723
113 Ga0501033_0130091 3300049570 Bacteria 1824
114 Ga0501034_0000046 3300049571 Bacteria 224049
115 Ga0501034_0045645 3300049571 Bacteria 4427
116 Ga0501034_0092765 3300049571 Bacteria 3016
117 Ga0501036_0056794 3300049572 Bacteria 3316
118 Ga0501036_0124666 3300049572 Bacteria 2175
119 Ga0501036_0130921 3300049572 Bacteria 2118
120 Ga0501037_0004443 3300049573 Bacteria 10184
121 Ga0501037_0015011 3300049573 Bacteria 5697
122 Ga0501038_0009319 3300049574 Bacteria 9007
123 Ga0501038_0013997 3300049574 Bacteria 7311
124 Ga0501038_0080353 3300049574 Bacteria 2748
125 Ga0501039_0000076 3300049575 Bacteria 74183
126 Ga0501039_0034166 3300049575 Bacteria 3924
127 Ga0501040_0000622 3300049576 Bacteria 21727
128 Ga0501040_0031045 3300049576 Bacteria 3610
129 Ga0501040_0035010 3300049576 Bacteria 3403
130 Ga0501041_0004933 3300049577 Bacteria 7757
131 Ga0501041_0006033 3300049577 Bacteria 7088
132 Ga0501043_0000344 3300049579 Bacteria 42137
133 Ga0501043_0042873 3300049579 Bacteria 3557
134 Ga0501046_0008460 3300049580 Bacteria 8969
135 Ga0501047_0000241 3300049581 Bacteria 64670
136 Ga0501047_0023185 3300049581 Bacteria 5959
137 Ga0501048_0000508 3300049582 Bacteria 27268
138 Ga0501048_0009329 3300049582 Bacteria 7367
139 Ga0501048_0049848 3300049582 Bacteria 2983
140 Ga0501067_0000959 3300049583 Bacteria 15453
141 Ga0501067_0015855 3300049583 Bacteria 4168
142 Ga0501067_0026807 3300049583 Bacteria 3191
143 Ga0501067_0034536 3300049583 Bacteria 2806
144 Ga0501070_0002962 3300049586 Bacteria 14792
145 Ga0501070_0139397 3300049586 Bacteria 2003
146 Ga0501071_0030861 3300049587 Bacteria 3793
147 Ga0501072_0000764 3300049588 Bacteria 23448
148 Ga0501073_0017335 3300049589 Bacteria 5216
149 Ga0501073_0039445 3300049589 Bacteria 3345
150 Ga0501074_0080097 3300049590 Bacteria 2343
151 Ga0501075_0002643 3300049591 Bacteria 11971
152 Ga0501076_0011340 3300049592 Bacteria 6636
153 Ga0501077_0001862 3300049593 Bacteria 12754
154 Ga0501077_0004391 3300049593 Bacteria 8551
155 Ga0501079_0001506 3300049741 Bacteria 16499
156 Ga0501080_0000052 3300049742 Bacteria 75093
157 Ga0501080_0007782 3300049742 Bacteria 9688
158 Ga0501080_0051987 3300049742 Bacteria 3813
159 Ga0501081_0039257 3300049743 Bacteria 3239
160 Ga0501083_0007326 3300049744 Bacteria 7823
161 Ga0501083_0023229 3300049744 Bacteria 4301
162 Ga0501035_0000104 3300049822 Bacteria 105594
163 Ga0501035_0048221 3300049822 Bacteria 3820
164 Ga0501035_0073003 3300049822 Bacteria 3036
165 Ga0501035_0098636 3300049822 Bacteria 2565
166 Ga0501044_0000020 3300049823 Bacteria 213460
167 Ga0501044_0046399 3300049823 Bacteria 4498
168 Ga0501045_0014095 3300049824 Bacteria 5661
169 nmdc:mga00v17_2261_c1 3300050491 Bacteria 9866
170 nmdc:mga06z11_13714_c1 3300050494 Bacteria 3568
171 nmdc:mga06z11_23671_c1 3300050494 Bacteria 2889
172 nmdc:mga06z11_536_c1 3300050494 Bacteria 13951
173 nmdc:mga0qj67_8250_c1 3300050509 Bacteria 7722
174 nmdc:mga06r32_3182_c1 3300050510 Bacteria 14710
175 Ga0495601_0000922 3300053077 Bacteria 16051
176 Ga0495612_0001753 3300053078 Bacteria 8889
177 Ga0500593_007584 3300053117 Bacteria 4424
178 Ga0500595_022045 3300053119 Bacteria 2263
179 Ga0500568_0000002 3300053139 Bacteria 880601
180 Ga0500616_0012705 3300053153 Bacteria 4921
181 Ga0500636_0023790 3300053177 Bacteria 3621
182 Ga0501084_0038863 3300054114 Bacteria 3979
183 Ga0501084_0041814 3300054114 Bacteria 3834
184 Ga0501082_0018627 3300060353 Bacteria 5984
185 Ga0501082_0048160 3300060353 Bacteria 3673
186 Ga0530510_0002093 3300061734 Bacteria 13714
187 2508731474 2508501050 Bacteria 9633614
188 2509077014 2508501114 Bacteria 7082538
189 2511391855 2511231027 Bacteria 5013807
190 2523103955 2522572158 Bacteria 6514390
191 2545677602 2545555834 Bacteria 8130841
192 2596373376 2595698237 Bacteria 6712432
193 2599103997 2597490356 Bacteria 7030811
194 2644732159 2643221733 Bacteria 5690728
195 2644735041 2643221734 Bacteria 5365412
196 2644745473 2643221736 Bacteria 6608466
197 2738743141 2738541281 Bacteria 5112672
198 2739352758 2738543032 Bacteria 5115625
199 2757570342 2757320392 Bacteria 3737298
200 2774868411 2773857925 Bacteria 6472445
201 2776262619 2775506901 Bacteria 9631051
202 2819719605 2818991467 Bacteria 5893227
203 2821444835 2821443989 Bacteria 7658172
204 2829747987 2829745981 Bacteria 5406054
205 2835313086 2835312727 Bacteria 7413381
206 2841761013 2841760612 Bacteria 6454112
207 2841912962 2841911363 Bacteria 6173697
208 2841918709 2841917233 Bacteria 6173500
209 2842699237 2842698319 Bacteria 5190321
210 2842779793 2842775625 Bacteria 5587290
211 2842874007 2842871566 Bacteria 4827117
212 2844106670 2844104063 Bacteria 6440972
213 2844533565 2844533157 Bacteria 7517899
214 2846957686 2846952575 Bacteria 6587527
215 2848863022 2848858292 Bacteria 7391279
216 2851183806 2851182111 Bacteria 6047226
217 2851247026 2851246043 Bacteria 6439203
218 2861696028 2861691609 Bacteria 5628931
219 2882459207 2882456835 Bacteria 6863978
220 2884298711 2884298095 Bacteria 3823049
221 2889307816 2889306138 Bacteria 6358934
222 2894233019 2894232714 Bacteria 8834183
223 2902336654 2902330777 Bacteria 6395352
224 2902406923 2902405164 Bacteria 6784948
225 2917704838 2917699015 Bacteria 7043791
226 2928127100 2928125067 Bacteria 5937560
227 3003668972 3003665799 Bacteria 7279786
228 641640354 641522639 Bacteria 7737025
229 643597795 643348564 Bacteria 8839022
230 8057530786 8057529695 Bacteria 6306553
231 Ga0501074_0077445
232 JGI25151J46595_10000028
233 JGI25151J46595_10000114
234 JGI25151J46595_10000124
235 Ga0055526_1001215
236 Ga0055524_1000020
237 Ga0070680_100014811
238 Ga0070682_100006019
239 Ga0070660_100022806
240 Ga0070714_100002716
241 Ga0070713_100008386
242 Ga0070705_100011435
243 Ga0070663_100000240
244 Ga0070681_10049605
245 Ga0070698_100004260
246 Ga0070695_100007885
247 Ga0070717_10002673
248 Ga0075368_10000645
249 Ga0075363_100036420
250 Ga0075364_10045954
251 Ga0075367_10021520
252 Ga0075428_100050982
253 Ga0075430_100043193
254 Ga0075431_100014477
255 Ga0105245_10026143
256 Ga0105243_10012109
257 Ga0105237_10014463
258 Ga0105238_10033759
259 Ga0105239_10059663
260 Ga0171462_1032
261 Ga0157380_10013352
262 Ga0157379_10093867
263 Ga0209130_1000190
264 Ga0209130_1000270
265 Ga0209675_1003918
266 Ga0209025_1000008
267 Ga0209025_1000705
268 Ga0209025_1002163
269 Ga0209564_1000049
270 Ga0209564_1000065
271 Ga0209256_1000014
272 Ga0209256_1000200
273 Ga0207426_1004849
274 Ga0207647_10008948
275 Ga0207707_10026249
276 Ga0207707_10058064
277 Ga0207693_10000701
278 Ga0207693_10019659
279 Ga0207660_10003820
280 Ga0207694_10025979
281 Ga0207678_10000440
282 Ga0207674_10036438
283 Ga0265338_10001571
284 Ga0265330_10012795
285 Ga0265325_10005486
286 Ga0265340_10003996
287 Ga0265327_10001216
288 Ga0265316_10022582
289 Ga0265313_10000522
290 Ga0265314_10044967
291 Ga0265342_10038396
292 Ga0373954_0008128
293 Ga0373933_0030732
294 Ga0373937_0011743
295 Ga0373937_0020232
296 Ga0373925_0034853
297 Ga0395900_0027447
298 Ga0395898_0054927
299 Ga0395898_0117098
300 Ga0436364_0776232
301 Ga0436360_1302493
302 Ga0436361_0779965
303 Ga0436362_0132450
304 Ga0439435_0003529
305 Ga0466968_0004326
306 Ga0495592_0006814
307 Ga0495651_0000870
308 Ga0495653_0002078
309 Ga0495608_0003489
310 Ga0495610_0009610
311 Ga0495618_0002411
312 Ga0495630_0048870
313 Ga0495652_0002942
314 Ga0495640_0000375
315 Ga0495645_0029739
316 Ga0495667_0002793
317 Ga0495634_0003901
318 Ga0495635_0001372
319 Ga0495657_0011880
320 Ga0495599_0007428
321 Ga0495658_0013461
322 Ga0495613_0024328
323 Ga0495581_0041407
324 Ga0495604_0000434
325 Ga0495674_0001933
326 Ga0496100_0010249
327 Ga0496104_0020373
328 Ga0496106_0001470
329 Ga0496107_0006500
330 Ga0496108_0000941
331 Ga0496109_0006158
332 Ga0496110_0002897
333 Ga0496112_0030772
334 Ga0496112_0145209
335 Ga0496113_0008768
336 Ga0496114_0104718
337 Ga0496117_0030197
338 Ga0496117_0031300
339 Ga0496122_0019384
340 Ga0496123_0064789
341 Ga0501032_0001217
342 Ga0501032_0019640
343 Ga0501033_0130091
344 Ga0501034_0000046
345 Ga0501034_0045645
346 Ga0501034_0092765
347 Ga0501036_0056794
348 Ga0501036_0124666
349 Ga0501036_0130921
350 Ga0501037_0004443
351 Ga0501037_0015011
352 Ga0501038_0009319
353 Ga0501038_0013997
354 Ga0501038_0080353
355 Ga0501039_0000076
356 Ga0501039_0034166
357 Ga0501040_0000622
358 Ga0501040_0031045
359 Ga0501040_0035010
360 Ga0501041_0004933
361 Ga0501041_0006033
362 Ga0501043_0000344
363 Ga0501043_0042873
364 Ga0501046_0008460
365 Ga0501047_0000241
366 Ga0501047_0023185
367 Ga0501048_0000508
368 Ga0501048_0009329
369 Ga0501048_0049848
370 Ga0501067_0000959
371 Ga0501067_0015855
372 Ga0501067_0026807
373 Ga0501067_0034536
374 Ga0501070_0002962
375 Ga0501070_0139397
376 Ga0501071_0030861
377 Ga0501072_0000764
378 Ga0501073_0017335
379 Ga0501073_0039445
380 Ga0501074_0080097
381 Ga0501075_0002643
382 Ga0501076_0011340
383 Ga0501077_0001862
384 Ga0501077_0004391
385 Ga0501079_0001506
386 Ga0501080_0000052
387 Ga0501080_0007782
388 Ga0501080_0051987
389 Ga0501081_0039257
390 Ga0501083_0007326
391 Ga0501083_0023229
392 Ga0501035_0000104
393 Ga0501035_0048221
394 Ga0501035_0073003
395 Ga0501035_0098636
396 Ga0501044_0000020
397 Ga0501044_0046399
398 Ga0501045_0014095
399 nmdc:mga00v17_2261_c1
400 nmdc:mga06z11_13714_c1
401 nmdc:mga06z11_23671_c1
402 nmdc:mga06z11_536_c1
403 nmdc:mga0qj67_8250_c1
404 nmdc:mga06r32_3182_c1
405 Ga0495601_0000922
406 Ga0495612_0001753
407 Ga0500593_007584
408 Ga0500595_022045
409 Ga0500568_0000002
410 Ga0500616_0012705
411 Ga0500636_0023790
412 Ga0501084_0038863
413 Ga0501084_0041814
414 Ga0501082_0018627
415 Ga0501082_0048160
416 Ga0530510_0002093
417 2508731474
418 2509077014
419 2511391855
420 2523103955
421 2545677602
422 2596373376
423 2599103997
424 2644732159
425 2644735041
426 2644745473
427 2738743141
428 2739352758
429 2757570342
430 2774868411
431 2776262619
432 2819719605
433 2821444835
434 2829747987
435 2835313086
436 2841761013
437 2841912962
438 2841918709
439 2842699237
440 2842779793
441 2842874007
442 2844106670
443 2844533565
444 2846957686
445 2848863022
446 2851183806
447 2851247026
448 2861696028
449 2882459207
450 2884298711
451 2889307816
452 2894233019
453 2902336654
454 2902406923
455 2917704838
456 2928127100
457 3003668972
458 641640354
459 643597795
460 8057530786

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01432

Peptidase_M3

Peptidase family M3

269

719

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
5l43-assembly2.cif.gz_B structure of k26-dcp 0.9754 19 694
1y79-assembly1.cif.gz_1 crystal structure of the e.coli dipeptidyl carboxypeptidase dcp in complex with a peptidic inhibitor 0.973 19 696
5l43-assembly2.cif.gz_B structure of k26-dcp 0.971 19 694
1y79-assembly1.cif.gz_1 crystal structure of the e.coli dipeptidyl carboxypeptidase dcp in complex with a peptidic inhibitor 0.9673 19 696
4ka7-assembly1.cif.gz_A structure of organellar oligopeptidase (e572q) in complex with an endogenous substrate 0.9445 19 694
ID Description Score Start End Superfamily
af_P24171_4_158_1.20.1050.40 Mainly Alpha;Up-down Bundle;Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2;Endopeptidase. Chain P; domain 1 0.9781 19 171 1.20.1050.40
1y79101 Mainly Alpha;Orthogonal Bundle;Neurolysin; domain 3; 0.9625 19 696 1.10.1370.40
af_Q94AM1_291_673_1.10.1370.40 Mainly Alpha;Orthogonal Bundle;Neurolysin; domain 3; 0.9618 218 578 1.10.1370.40
af_P24171_4_158_1.20.1050.40 Mainly Alpha;Up-down Bundle;Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2;Endopeptidase. Chain P; domain 1 0.9596 19 171 1.20.1050.40
1y79101 Mainly Alpha;Orthogonal Bundle;Neurolysin; domain 3; 0.9531 19 696 1.10.1370.40
ID Description Score Start End GO Terms
AF-A0A2D6BEQ9-F1-model_v4 deleted 0.9927 19 579
AF-A0A503EBM0-F1-model_v4 M3 family metallopeptidase 0.9925 24 694 GO:0004180
GO:0004222
GO:0005829
GO:0006508
GO:0046872
AF-A0A537U3I0-F1-model_v4 M3 family metallopeptidase 0.9924 83 694 GO:0004180
GO:0004222
GO:0005829
GO:0006508
GO:0046872
AF-A0A7U8JGW9-F1-model_v4 deleted 0.9921 14 694
AF-A0A1S7Q866-F1-model_v4 Peptidyl-dipeptidase (EC 3.4.15.5) 0.9918 25 694 GO:0004180
GO:0004222
GO:0005829
GO:0006508
GO:0046872

Map