F343017

General Info

Members Datasets Scaffolds Average Seq Length
230 181 458 530

Family's Representative Sequence

Representative Sequence 3300013104|Ga0157370_10053095|Ga0157370_100530953
Length 577
Sequence VPAKESPFSRIESELSKSGKESSYDYVIVGAGSAGCVLANRLSAEPDVSVLLIEAGPRDRTWKIHMPAALTYNLSGNKYNWAYETEAQPHMDGRRMYWPRGRVLGGSSSLNAMVYVRGHALDYDRWAGNGLAEWSYAHVLPYFKRAETCARGGDAYRGDGGPLHVSRGAMRNPLFAAFIAAGQQAGYPPTEDMNGFQQEGFGAMDMTIHRGRRWSAATAYLRPALPRPNLKGIVEAQATRVLLAGGRATGVEFRHRGRLHAARARREVILSGGAINSPQLLLLSGIGPADEIRRHGIPMALDLPGVGRNLQDHLELYVQYQCTQPITLHLVENPLNRVRIGLEWFLFKSGMASSAHLEAGAFIRRNDEVRHPDLQFHFLPSLVNDHGRQPIGRHAFQAHVGPMRPTSTGFVRLRSADPTAHPEIQPFYLSTEQDRREMRDAVRLARDIFAQPAFDPYRGAEIQPGAAARSDAGIDAFVRAKADSAYHPSCTCKMGDDAMAVVDGRLRVHGIEGLRIVDASIMPSVVSGNLNAPTIMIAEKAADMILGRAAPEAEYAKVYSPPRGGTRRLPARDHANA

Samples

Sample ID Description Type Environment
1 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
2 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
3 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
4 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
5 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
6 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
12 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
13 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
14 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
15 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
16 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
17 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
18 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
19 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
20 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
21 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
26 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
27 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
30 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
31 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
32 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
34 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
36 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
49 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
50 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
51 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
52 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
53 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
54 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
55 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
56 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
57 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
58 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
59 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
60 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
61 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
62 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
63 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
64 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
65 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
66 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
67 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
68 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
69 3300042139 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0727L_E14_072516_1442 Metagenome Rhizosphere
70 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
71 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
72 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
73 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
74 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
75 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
76 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
77 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
78 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
79 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
80 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
81 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
82 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
83 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
84 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
85 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
86 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
87 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
88 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
89 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
90 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
91 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
92 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
93 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
94 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
95 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
96 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
97 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
98 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
99 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
100 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
101 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
102 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
103 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
104 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
105 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
106 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
107 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
108 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
109 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
110 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
111 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
112 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
113 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
114 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
115 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
116 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
117 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
118 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
119 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
120 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
121 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
122 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
123 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
124 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
125 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
126 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
127 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
128 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
129 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
130 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
131 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
132 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
133 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
134 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
135 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
136 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
137 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
138 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
139 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
148 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
149 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
150 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
151 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
152 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
153 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
154 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
155 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
156 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
157 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
158 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
159 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
160 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
161 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
162 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
163 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
164 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
165 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
166 2511231008 Pseudomonas sp. GM21 Isolate Nodule
167 2511231012 Pseudomonas sp. GM33 Isolate Nodule
168 2511231020 Pseudomonas sp. GM74 Isolate Nodule
169 2600254931 Pseudomonas sp. NFIX28 Isolate Rhizoplane
170 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
171 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
172 2849560528 Caulobacter zeae 410 Isolate Unclassified
173 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
174 2851153111 Caulobacter radicis 736 Isolate Unclassified
175 2883291878 Hypericibacter terrae R5913 Isolate Rhizosphere
176 2883354860 Hypericibacter adhaerens R5959 Isolate Rhizosphere
177 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
178 8056120720 Pseudomonas maumuensis COW77 Isolate Rhizosphere
179 8056125926 Pseudomonas azerbaijanorientalis SWRI123 Isolate Rhizosphere
180 8056172158 Pseudomonas ekonensis COR58 Isolate Rhizosphere
181 8056177738 Pseudomonas azerbaijanoccidentalis SWRI74 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.04
Metatranscriptomes 0
Isolates 6.96

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.04
Nodule 1.3
Rhizoplane 3.04
Rhizosphere 73.91
Stem 0
Stem Tuber 0
Unclassified 1.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157370_10053095 3300013104 Bacteria 3866
2 JGI25404J52841_10003150 3300003659 Bacteria 3226
3 Ga0055536_1002722 3300003781 Bacteria 9801
4 Ga0055528_1002069 3300003790 Bacteria 11185
5 Ga0055531_10012870 3300003794 Bacteria 3898
6 Ga0065714_10003023 3300005288 Bacteria 15438
7 Ga0065714_10064708 3300005288 Bacteria 22114
8 Ga0070671_100011012 3300005355 Bacteria 7257
9 Ga0070681_10016661 3300005458 Bacteria 7337
10 Ga0070665_100042025 3300005548 Bacteria 4594
11 Ga0068855_100010448 3300005563 Bacteria 11199
12 Ga0068855_100023054 3300005563 Bacteria 7460
13 Ga0068855_100071282 3300005563 Bacteria 4041
14 Ga0068859_100003401 3300005617 Bacteria 16186
15 Ga0068861_100093961 3300005719 Unclassified 2372
16 Ga0068862_100005093 3300005844 Bacteria 11057
17 Ga0081540_1000289 3300005983 Bacteria 52703
18 Ga0081540_1000667 3300005983 Bacteria 32290
19 Ga0081540_1007240 3300005983 Bacteria 7952
20 Ga0075365_10028419 3300006038 Bacteria 3567
21 Ga0075363_100002344 3300006048 Bacteria 7700
22 Ga0075364_10026899 3300006051 Bacteria 3672
23 Ga0075364_10035165 3300006051 Bacteria 3237
24 Ga0075362_10023335 3300006177 Bacteria 2616
25 Ga0075367_10002468 3300006178 Bacteria 8465
26 Ga0075367_10108755 3300006178 Bacteria 1700
27 Ga0075370_10003103 3300006353 Bacteria 7845
28 Ga0097620_100003401 3300006931 Bacteria 16186
29 Ga0105250_10006481 3300009092 Bacteria 5114
30 Ga0105250_10011797 3300009092 Bacteria 3621
31 Ga0105240_10032176 3300009093 Bacteria 6793
32 Ga0105240_10038731 3300009093 Bacteria 6112
33 Ga0114129_10087150 3300009147 Bacteria 4330
34 Ga0105243_10025455 3300009148 Bacteria 4522
35 Ga0105248_10114958 3300009177 Bacteria 3035
36 Ga0105249_10066696 3300009553 Bacteria 3314
37 Ga0105239_10082114 3300010375 Bacteria 3548
38 Ga0163162_10204364 3300013306 Bacteria 2104
39 Ga0163163_10064431 3300014325 Bacteria 3636
40 Ga0163163_10116712 3300014325 Bacteria 2701
41 Ga0163161_10000683 3300017792 Bacteria 27101
42 Ga0209676_1001528 3300025292 Bacteria 21011
43 Ga0209758_1000480 3300025297 Bacteria 65746
44 Ga0209050_1000774 3300025298 Bacteria 45907
45 Ga0209256_1004719 3300025299 Bacteria 8345
46 Ga0207710_10002890 3300025900 Bacteria 7809
47 Ga0207680_10022160 3300025903 Bacteria 3450
48 Ga0207707_10007425 3300025912 Bacteria 9549
49 Ga0207695_10067610 3300025913 Unclassified 3664
50 Ga0207660_10051354 3300025917 Bacteria 2931
51 Ga0207644_10002287 3300025931 Bacteria 12434
52 Ga0207667_10028351 3300025949 Bacteria 6082
53 Ga0207712_10032360 3300025961 Bacteria 3530
54 Ga0207639_10007765 3300026041 Bacteria 7330
55 Ga0207641_10015214 3300026088 Bacteria 6304
56 Ga0207675_100141909 3300026118 Unclassified 2282
57 Ga0268264_10024948 3300028381 Bacteria 4886
58 Ga0265338_10124947 3300028800 Bacteria 2043
59 Ga0265327_10012282 3300031251 Bacteria 5797
60 Ga0307509_10000004 3300031507 Bacteria 535507
61 Ga0307510_10017174 3300033180 Bacteria 8537
62 Ga0307510_10036201 3300033180 Bacteria 5496
63 Ga0373954_0003159 3300035118 Bacteria 6963
64 Ga0373956_0016609 3300035119 Bacteria 3093
65 Ga0373955_0001386 3300035172 Bacteria 10297
66 Ga0373924_0010132 3300035410 Bacteria 3470
67 Ga0373935_0022754 3300035692 Bacteria 3847
68 Ga0373927_0083264 3300035695 Bacteria 2074
69 Ga0373933_0005542 3300035724 Bacteria 6877
70 Ga0373947_0023741 3300035725 Bacteria 3569
71 Ga0373937_0002028 3300036401 Bacteria 16914
72 Ga0373925_0024184 3300037068 Bacteria 4434
73 Ga0436364_0477684 3300037853 Bacteria 14835
74 Ga0436364_1163705 3300037853 Bacteria 5489
75 Ga0439438_003576 3300041405 Bacteria 6235
76 Ga0439466_0003281 3300041411 Bacteria 6303
77 Ga0439466_0021001 3300041411 Bacteria 2320
78 Ga0439466_0043183 3300041411 Bacteria 1498
79 Ga0451802_0198246 3300041460 Bacteria 2927
80 Ga0439432_003363 3300042006 Bacteria 5933
81 Ga0439452_000110 3300042010 Bacteria 66390
82 Ga0439452_002291 3300042010 Bacteria 7152
83 Ga0450903_000544 3300042138 Bacteria 7837
84 Ga0450904_000003 3300042139 Bacteria 81068
85 Ga0439460_0005916 3300042461 Bacteria 3015
86 Ga0466961_0090390 3300044693 Bacteria 1934
87 Ga0495617_022759 3300046452 Bacteria 2119
88 Ga0495591_004424 3300046458 Bacteria 6892
89 Ga0495629_0002190 3300046459 Bacteria 15079
90 Ga0495638_0008209 3300046460 Bacteria 7422
91 Ga0495638_0098702 3300046460 Bacteria 1749
92 Ga0495651_0001006 3300046462 Bacteria 21897
93 Ga0495653_0011823 3300046463 Bacteria 7128
94 Ga0495582_0088723 3300046473 Bacteria 1723
95 Ga0495664_0003228 3300046477 Bacteria 8854
96 Ga0495584_0000018 3300046491 Bacteria 142382
97 Ga0495584_0000176 3300046491 Bacteria 45031
98 Ga0495584_0001312 3300046491 Bacteria 15100
99 Ga0495584_0002343 3300046491 Bacteria 10800
100 Ga0495585_0000012 3300046492 Bacteria 203064
101 Ga0495585_0004310 3300046492 Bacteria 9268
102 Ga0495607_0011212 3300046501 Bacteria 5979
103 Ga0495583_0001155 3300046506 Bacteria 28753
104 Ga0495606_0002784 3300046507 Bacteria 19537
105 Ga0495606_0019322 3300046507 Bacteria 5075
106 Ga0495608_0004042 3300046511 Bacteria 10529
107 Ga0495610_0007031 3300046512 Bacteria 7605
108 Ga0495616_0000084 3300046513 Bacteria 79811
109 Ga0495616_0001364 3300046513 Bacteria 17005
110 Ga0495616_0072118 3300046513 Bacteria 1668
111 Ga0495618_0000741 3300046514 Bacteria 22826
112 Ga0495630_0047743 3300046517 Bacteria 3203
113 Ga0495632_0001410 3300046519 Bacteria 20086
114 Ga0495632_0001830 3300046519 Bacteria 17135
115 Ga0495632_0006490 3300046519 Bacteria 7507
116 Ga0495637_0001062 3300046520 Bacteria 17151
117 Ga0495637_0002291 3300046520 Bacteria 10606
118 Ga0495637_0002949 3300046520 Bacteria 9164
119 Ga0495648_0005698 3300046524 Bacteria 10298
120 Ga0495648_0031181 3300046524 Bacteria 3514
121 Ga0495652_0027255 3300046529 Bacteria 5036
122 Ga0495654_0013779 3300046530 Bacteria 4318
123 Ga0495640_0005375 3300046533 Bacteria 10189
124 Ga0495587_0010989 3300046536 Bacteria 5743
125 Ga0495609_0005940 3300046538 Bacteria 6310
126 Ga0495633_0001731 3300046558 Bacteria 16318
127 Ga0495667_0000654 3300046559 Bacteria 22139
128 Ga0495668_0011404 3300046616 Bacteria 5322
129 Ga0495668_0096475 3300046616 Bacteria 1618
130 Ga0495634_0004062 3300046642 Bacteria 11588
131 Ga0495611_0037024 3300046648 Bacteria 2167
132 Ga0495625_0000014 3300046660 Bacteria 323486
133 Ga0495635_0003108 3300046663 Bacteria 11421
134 Ga0495599_0005427 3300046678 Bacteria 7619
135 Ga0495646_0001331 3300046680 Bacteria 14585
136 Ga0495658_0009649 3300046683 Bacteria 4813
137 Ga0495624_0009016 3300046690 Bacteria 6933
138 Ga0495670_0052987 3300046691 Bacteria 2032
139 Ga0495671_0004687 3300046692 Bacteria 8093
140 Ga0495649_0005386 3300046694 Bacteria 8145
141 Ga0495649_0007592 3300046694 Bacteria 6591
142 Ga0495649_0009163 3300046694 Bacteria 5903
143 Ga0495589_0000242 3300046794 Bacteria 45548
144 Ga0495589_0006798 3300046794 Bacteria 6023
145 Ga0495660_0009033 3300046810 Bacteria 5823
146 Ga0495660_0012943 3300046810 Bacteria 4836
147 Ga0495660_0021545 3300046810 Bacteria 3691
148 Ga0495604_0001231 3300047317 Bacteria 20971
149 Ga0495676_0078083 3300047321 Bacteria 2522
150 Ga0495680_0002906 3300047322 Bacteria 17209
151 Ga0495675_0017647 3300047444 Bacteria 4525
152 Ga0495679_000746 3300047446 Bacteria 20854
153 Ga0495673_0003115 3300047469 Bacteria 11108
154 Ga0495673_0011029 3300047469 Bacteria 4887
155 Ga0495681_0002249 3300047470 Bacteria 13884
156 Ga0495681_0004743 3300047470 Bacteria 9213
157 Ga0495681_0011325 3300047470 Bacteria 5318
158 Ga0495684_0002299 3300047471 Bacteria 15301
159 Ga0495686_0000439 3300047472 Bacteria 63587
160 Ga0495686_0000638 3300047472 Bacteria 48292
161 Ga0495602_0011794 3300048088 Bacteria 9027
162 Ga0495626_0000424 3300048091 Bacteria 43326
163 Ga0495626_0005268 3300048091 Bacteria 7642
164 Ga0496102_0061873 3300048905 Bacteria 3427
165 Ga0496108_0043663 3300048911 Bacteria 3744
166 Ga0496109_0145019 3300048912 Bacteria 2221
167 Ga0496111_0051700 3300048914 Bacteria 2966
168 Ga0496112_0040411 3300048915 Bacteria 4560
169 Ga0496116_0070818 3300048919 Bacteria 2211
170 Ga0496117_0000952 3300048920 Bacteria 44274
171 Ga0496118_0000622 3300048921 Bacteria 58240
172 Ga0496119_0030826 3300048922 Bacteria 3607
173 Ga0496121_0031847 3300048924 Bacteria 4808
174 Ga0496124_0080744 3300048927 Bacteria 2675
175 Ga0496124_0096083 3300048927 Bacteria 2407
176 Ga0496125_0042807 3300048928 Bacteria 3851
177 Ga0496125_0046516 3300048928 Bacteria 3639
178 Ga0496126_0003405 3300048929 Bacteria 20101
179 Ga0495678_015157 3300049459 Bacteria 3558
180 Ga0495678_027435 3300049459 Bacteria 2416
181 Ga0501032_0020401 3300049569 Bacteria 4616
182 Ga0501034_0003152 3300049571 Bacteria 18970
183 Ga0501034_0025074 3300049571 Bacteria 6069
184 Ga0501034_0029039 3300049571 Bacteria 5622
185 Ga0501036_0076243 3300049572 Bacteria 2836
186 Ga0501037_0001786 3300049573 Bacteria 15607
187 Ga0501038_0021666 3300049574 Bacteria 5765
188 Ga0501043_0025518 3300049579 Bacteria 4638
189 Ga0501046_0001067 3300049580 Bacteria 26860
190 Ga0501047_0134515 3300049581 Bacteria 2352
191 Ga0501073_0022009 3300049589 Bacteria 4594
192 Ga0501073_0048772 3300049589 Bacteria 2971
193 Ga0501257_000811 3300049686 Bacteria 6239
194 Ga0501083_0004236 3300049744 Bacteria 10100
195 Ga0501044_0006568 3300049823 Bacteria 12841
196 nmdc:mga03n38_855_c1 3300050490 Bacteria 8155
197 nmdc:mga06z11_610_c1 3300050494 Bacteria 13025
198 nmdc:mga06z11_66735_c1 3300050494 Bacteria 1892
199 nmdc:mga07m45_13966_c1 3300050496 Bacteria 4269
200 Ga0495612_0005438 3300053078 Bacteria 5265
201 Ga0500610_0000196 3300053079 Bacteria 18435
202 Ga0495595_0005927 3300053084 Bacteria 4956
203 Ga0495619_0031133 3300053085 Bacteria 3455
204 Ga0500651_0006351 3300053093 Bacteria 6806
205 Ga0500595_001212 3300053119 Bacteria 14259
206 Ga0500595_005005 3300053119 Bacteria 5843
207 Ga0500652_000068 3300053131 Bacteria 45116
208 Ga0500586_000398 3300053145 Bacteria 8700
209 Ga0500616_0013260 3300053153 Bacteria 4793
210 Ga0500616_0047823 3300053153 Bacteria 2270
211 Ga0500637_0000020 3300053178 Bacteria 63918
212 Ga0500609_001523 3300053731 Bacteria 3385
213 Ga0500661_005193 3300055283 Bacteria 2436
214 2511275183 2511231008 Bacteria 6624100
215 2511303092 2511231012 Bacteria 6738011
216 2511348267 2511231020 Bacteria 6115223
217 2600366628 2600254931 Bacteria 6734225
218 2792459419 2791355048 Bacteria 5832535
219 2843744652 2843744320 Bacteria 5659202
220 2849563401 2849560528 Bacteria 5393480
221 2849574184 2849573788 Bacteria 5421256
222 2851154387 2851153111 Bacteria 5542585
223 2883292675 2883291878 Bacteria 5894118
224 2883355643 2883354860 Bacteria 5865246
225 2898330678 2898329390 Bacteria 5168154
226 8056123900 8056120720 Bacteria 5758328
227 8056129811 8056125926 Bacteria 6228218
228 8056174427 8056172158 Bacteria 6133900
229 8056182560 8056177738 Bacteria 6748268
230 Ga0157370_10053095
231 JGI25404J52841_10003150
232 Ga0055536_1002722
233 Ga0055528_1002069
234 Ga0055531_10012870
235 Ga0065714_10003023
236 Ga0065714_10064708
237 Ga0070671_100011012
238 Ga0070681_10016661
239 Ga0070665_100042025
240 Ga0068855_100010448
241 Ga0068855_100023054
242 Ga0068855_100071282
243 Ga0068859_100003401
244 Ga0068861_100093961
245 Ga0068862_100005093
246 Ga0081540_1000289
247 Ga0081540_1000667
248 Ga0081540_1007240
249 Ga0075365_10028419
250 Ga0075363_100002344
251 Ga0075364_10026899
252 Ga0075364_10035165
253 Ga0075362_10023335
254 Ga0075367_10002468
255 Ga0075367_10108755
256 Ga0075370_10003103
257 Ga0097620_100003401
258 Ga0105250_10006481
259 Ga0105250_10011797
260 Ga0105240_10032176
261 Ga0105240_10038731
262 Ga0114129_10087150
263 Ga0105243_10025455
264 Ga0105248_10114958
265 Ga0105249_10066696
266 Ga0105239_10082114
267 Ga0163162_10204364
268 Ga0163163_10064431
269 Ga0163163_10116712
270 Ga0163161_10000683
271 Ga0209676_1001528
272 Ga0209758_1000480
273 Ga0209050_1000774
274 Ga0209256_1004719
275 Ga0207710_10002890
276 Ga0207680_10022160
277 Ga0207707_10007425
278 Ga0207695_10067610
279 Ga0207660_10051354
280 Ga0207644_10002287
281 Ga0207667_10028351
282 Ga0207712_10032360
283 Ga0207639_10007765
284 Ga0207641_10015214
285 Ga0207675_100141909
286 Ga0268264_10024948
287 Ga0265338_10124947
288 Ga0265327_10012282
289 Ga0307509_10000004
290 Ga0307510_10017174
291 Ga0307510_10036201
292 Ga0373954_0003159
293 Ga0373956_0016609
294 Ga0373955_0001386
295 Ga0373924_0010132
296 Ga0373935_0022754
297 Ga0373927_0083264
298 Ga0373933_0005542
299 Ga0373947_0023741
300 Ga0373937_0002028
301 Ga0373925_0024184
302 Ga0436364_0477684
303 Ga0436364_1163705
304 Ga0439438_003576
305 Ga0439466_0003281
306 Ga0439466_0021001
307 Ga0439466_0043183
308 Ga0451802_0198246
309 Ga0439432_003363
310 Ga0439452_000110
311 Ga0439452_002291
312 Ga0450903_000544
313 Ga0450904_000003
314 Ga0439460_0005916
315 Ga0466961_0090390
316 Ga0495617_022759
317 Ga0495591_004424
318 Ga0495629_0002190
319 Ga0495638_0008209
320 Ga0495638_0098702
321 Ga0495651_0001006
322 Ga0495653_0011823
323 Ga0495582_0088723
324 Ga0495664_0003228
325 Ga0495584_0000018
326 Ga0495584_0000176
327 Ga0495584_0001312
328 Ga0495584_0002343
329 Ga0495585_0000012
330 Ga0495585_0004310
331 Ga0495607_0011212
332 Ga0495583_0001155
333 Ga0495606_0002784
334 Ga0495606_0019322
335 Ga0495608_0004042
336 Ga0495610_0007031
337 Ga0495616_0000084
338 Ga0495616_0001364
339 Ga0495616_0072118
340 Ga0495618_0000741
341 Ga0495630_0047743
342 Ga0495632_0001410
343 Ga0495632_0001830
344 Ga0495632_0006490
345 Ga0495637_0001062
346 Ga0495637_0002291
347 Ga0495637_0002949
348 Ga0495648_0005698
349 Ga0495648_0031181
350 Ga0495652_0027255
351 Ga0495654_0013779
352 Ga0495640_0005375
353 Ga0495587_0010989
354 Ga0495609_0005940
355 Ga0495633_0001731
356 Ga0495667_0000654
357 Ga0495668_0011404
358 Ga0495668_0096475
359 Ga0495634_0004062
360 Ga0495611_0037024
361 Ga0495625_0000014
362 Ga0495635_0003108
363 Ga0495599_0005427
364 Ga0495646_0001331
365 Ga0495658_0009649
366 Ga0495624_0009016
367 Ga0495670_0052987
368 Ga0495671_0004687
369 Ga0495649_0005386
370 Ga0495649_0007592
371 Ga0495649_0009163
372 Ga0495589_0000242
373 Ga0495589_0006798
374 Ga0495660_0009033
375 Ga0495660_0012943
376 Ga0495660_0021545
377 Ga0495604_0001231
378 Ga0495676_0078083
379 Ga0495680_0002906
380 Ga0495675_0017647
381 Ga0495679_000746
382 Ga0495673_0003115
383 Ga0495673_0011029
384 Ga0495681_0002249
385 Ga0495681_0004743
386 Ga0495681_0011325
387 Ga0495684_0002299
388 Ga0495686_0000439
389 Ga0495686_0000638
390 Ga0495602_0011794
391 Ga0495626_0000424
392 Ga0495626_0005268
393 Ga0496102_0061873
394 Ga0496108_0043663
395 Ga0496109_0145019
396 Ga0496111_0051700
397 Ga0496112_0040411
398 Ga0496116_0070818
399 Ga0496117_0000952
400 Ga0496118_0000622
401 Ga0496119_0030826
402 Ga0496121_0031847
403 Ga0496124_0080744
404 Ga0496124_0096083
405 Ga0496125_0042807
406 Ga0496125_0046516
407 Ga0496126_0003405
408 Ga0495678_015157
409 Ga0495678_027435
410 Ga0501032_0020401
411 Ga0501034_0003152
412 Ga0501034_0025074
413 Ga0501034_0029039
414 Ga0501036_0076243
415 Ga0501037_0001786
416 Ga0501038_0021666
417 Ga0501043_0025518
418 Ga0501046_0001067
419 Ga0501047_0134515
420 Ga0501073_0022009
421 Ga0501073_0048772
422 Ga0501257_000811
423 Ga0501083_0004236
424 Ga0501044_0006568
425 nmdc:mga03n38_855_c1
426 nmdc:mga06z11_610_c1
427 nmdc:mga06z11_66735_c1
428 nmdc:mga07m45_13966_c1
429 Ga0495612_0005438
430 Ga0500610_0000196
431 Ga0495595_0005927
432 Ga0495619_0031133
433 Ga0500651_0006351
434 Ga0500595_001212
435 Ga0500595_005005
436 Ga0500652_000068
437 Ga0500586_000398
438 Ga0500616_0013260
439 Ga0500616_0047823
440 Ga0500637_0000020
441 Ga0500609_001523
442 Ga0500661_005193
443 2511275183
444 2511303092
445 2511348267
446 2600366628
447 2792459419
448 2843744652
449 2849563401
450 2849574184
451 2851154387
452 2883292675
453 2883355643
454 2898330678
455 8056123900
456 8056129811
457 8056174427
458 8056182560

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00732

GMC_oxred_N

GMC oxidoreductase

24

315

0.99

PF05199

GMC_oxred_C

GMC oxidoreductase

405

538

0.94

PF05834

Lycopene_cycl

Lycopene cyclase protein

25

88

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
6yrx-assembly1.cif.gz_AAA low-dose crystal structure of fap at room temperature 0.9586 4 516
6ys2-assembly1.cif.gz_AAA crystal structure of fap r451a in the dark at 100k 0.9577 4 516
7r36-assembly1.cif.gz_A difference-refined structure of fatty acid photodecarboxylase 2 microsecond following 400-nm laser irradiation of the dark-state determined by sfx 0.9564 1 516
6ys1-assembly1.cif.gz_AAA crystal structure of fap r451k mutant in the dark at 100k 0.9556 4 516
7r36-assembly1.cif.gz_A difference-refined structure of fatty acid photodecarboxylase 2 microsecond following 400-nm laser irradiation of the dark-state determined by sfx 0.9528 1 516
ID Description Score Start End Superfamily
af_P9WMV5_6_524_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9786 6 512 3.40.50.2000
af_Q6UPE0_47_576_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.974 7 513 3.50.50.60
af_P17444_4_531_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9691 6 513 3.50.50.60
af_Q2FV11_9_533_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9617 6 510 3.50.50.60
af_P9WMV5_6_524_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.958 6 512 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A7V9F1J3-F1-model_v4 GMC family oxidoreductase N-terminal domain-containing protein 0.9928 5 118 GO:0016614
GO:0050660
AF-A0A435K6U6-F1-model_v4 deleted 0.9926 5 145
AF-A0A4D4KEH0-F1-model_v4 Glucose-methanol-choline oxidoreductase N-terminal domain-containing protein 0.991 2 280 GO:0016614
GO:0050660
AF-A0A1M7K7Z0-F1-model_v4 GMC oxidoreductase 0.9901 4 284 GO:0016614
GO:0050660
AF-A0A1Z4LYU1-F1-model_v4 Glucose-methanol-choline oxidoreductase 0.9896 4 516 GO:0016020
GO:0016614
GO:0050660

Map