F342693

General Info

Members Datasets Scaffolds Average Seq Length
230 148 461 296

Family's Representative Sequence

Representative Sequence 3300005329|Ga0070683_100052448|Ga0070683_1000524483
Length 320
Sequence MTQQPFTRPGAVDLSGLSRPAQTTGQPTAGATAAGGPTPAGGRSAYSLDVTEQNFQTLLESSVTAPVVLVFYSPSRVPESTAYADEVAAAVEAYDGRFLVGLVDIDASPAIAQTLQIPQVPLLMVILDGRPAAQPIPGVLKRDELDTLLNQLAQGLTAQGITSRHQPLSAATPPAGDETTGEQVDPRYAAAQQALENDDIDGAVAEYQRLVDANPADAEAAAGLAMAKVLQRTQGVDPSAAREAAAANPDDVDAQTLAADLDMLGGHVDDAFNRLVDLVRRTAGDERNRAREHLIGLFAAVGNDDPRVLRGRQNLASALF

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
21 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
26 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
27 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
28 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
29 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
30 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
35 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
47 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
76 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
77 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
78 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
79 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
80 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
81 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
82 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
83 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
84 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
85 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
86 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
87 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
88 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
89 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
90 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
91 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
92 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
93 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
94 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
95 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
96 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
97 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
98 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
99 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
115 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
116 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
117 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
118 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
119 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
120 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
121 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
122 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
123 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
124 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
125 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
126 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
127 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
128 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
130 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
131 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
132 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
133 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
134 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
135 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
136 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
137 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
138 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
139 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
140 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
141 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
142 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
143 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
144 2643221561 Nocardioides sp. Root151 Isolate Unclassified
145 2643221615 Nocardioides sp. Root224 Isolate Unclassified
146 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
147 2643221696 Nocardioides sp. Root140 Isolate Unclassified
148 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 97.83
Metatranscriptomes 0
Isolates 2.17

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.09
Nodule 0.43
Rhizoplane 4.78
Rhizosphere 85.22
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100052448 3300005329 Bacteria 3778
2 LJQas_1003245 3300000549 Bacteria 2192
3 rootH1_10016081 3300003316 Bacteria 1703
4 rootH1_10016081 3300003323 Bacteria 14381
5 rootL2_10199468 3300003322 Bacteria 1641
6 Ga0070658_10054286 3300005327 Bacteria 3253
7 Ga0070658_10139730 3300005327 Bacteria 2023
8 Ga0070683_100010924 3300005329 Bacteria 7821
9 Ga0070683_100235539 3300005329 Bacteria 1741
10 Ga0068869_100475507 3300005334 Bacteria 1040
11 Ga0070666_10372545 3300005335 Bacteria 1024
12 Ga0070680_100130530 3300005336 Bacteria 2102
13 Ga0070682_100010633 3300005337 Bacteria 5227
14 Ga0070668_100256894 3300005347 Bacteria 1452
15 Ga0070681_10209221 3300005458 Bacteria 1867
16 Ga0070685_10108376 3300005466 Bacteria 1707
17 Ga0070679_100021596 3300005530 Bacteria 6286
18 Ga0070684_100036089 3300005535 Bacteria 4235
19 Ga0070684_100044254 3300005535 Bacteria 3849
20 Ga0070684_100075859 3300005535 Bacteria 2966
21 Ga0068853_100160073 3300005539 Bacteria 2031
22 Ga0070665_100000301 3300005548 Bacteria 77279
23 Ga0070665_100184200 3300005548 Bacteria 2089
24 Ga0070665_100190850 3300005548 Bacteria 2050
25 Ga0068852_100062000 3300005616 Bacteria 3251
26 Ga0068859_100435581 3300005617 Bacteria 1407
27 Ga0068864_100048001 3300005618 Bacteria 3670
28 Ga0068861_100249447 3300005719 Bacteria 1514
29 Ga0068851_10153299 3300005834 Bacteria 1261
30 Ga0068858_100128010 3300005842 Bacteria 2379
31 Ga0068860_100186753 3300005843 Bacteria 2005
32 Ga0081455_10000134 3300005937 Bacteria 87309
33 Ga0081455_10000782 3300005937 Bacteria 40906
34 Ga0081455_10009159 3300005937 Bacteria 10209
35 Ga0081455_10181331 3300005937 Bacteria 1594
36 Ga0081455_10208591 3300005937 Bacteria 1457
37 Ga0081538_10000249 3300005981 Bacteria 61087
38 Ga0081538_10045066 3300005981 Bacteria 2739
39 Ga0075365_10001446 3300006038 Bacteria 10771
40 Ga0075368_10000274 3300006042 Bacteria 14818
41 Ga0075368_10037619 3300006042 Bacteria 1893
42 Ga0075363_100009794 3300006048 Bacteria 4516
43 Ga0075363_100086355 3300006048 Bacteria 1722
44 Ga0075364_10010905 3300006051 Bacteria 5507
45 Ga0075370_10070517 3300006353 Bacteria 1999
46 Ga0075428_100023219 3300006844 Bacteria 6860
47 Ga0075430_100063428 3300006846 Bacteria 3104
48 Ga0075431_100001150 3300006847 Bacteria 23762
49 Ga0075431_100045687 3300006847 Bacteria 4515
50 Ga0075429_100016315 3300006880 Bacteria 6439
51 Ga0068865_100065801 3300006881 Bacteria 2555
52 Ga0097620_100435590 3300006931 Bacteria 1407
53 Ga0111539_10021410 3300009094 Bacteria 7958
54 Ga0105245_10027858 3300009098 Bacteria 4979
55 Ga0114129_10049130 3300009147 Bacteria 5929
56 Ga0105243_10139797 3300009148 Bacteria 2064
57 Ga0105243_10184458 3300009148 Bacteria 1817
58 Ga0105242_10095269 3300009176 Bacteria 2512
59 Ga0105248_10107898 3300009177 Bacteria 3139
60 Ga0105237_10186525 3300009545 Bacteria 2074
61 Ga0105249_10067593 3300009553 Bacteria 3293
62 Ga0105249_10133437 3300009553 Bacteria 2373
63 Ga0105239_10008043 3300010375 Bacteria 12034
64 Ga0105246_10005379 3300011119 Bacteria 7794
65 Ga0157369_10029972 3300013105 Bacteria 6005
66 Ga0163162_10231547 3300013306 Bacteria 1978
67 Ga0157372_10002981 3300013307 Bacteria 18239
68 Ga0157375_10032351 3300013308 Bacteria 4960
69 Ga0157375_10123331 3300013308 Bacteria 2703
70 Ga0157375_10268824 3300013308 Bacteria 1867
71 Ga0163163_10096552 3300014325 Bacteria 2976
72 Ga0157377_10179378 3300014745 Bacteria 1331
73 Ga0157379_10023886 3300014968 Bacteria 5427
74 Ga0207705_10142571 3300025909 Bacteria 1790
75 Ga0207707_10046598 3300025912 Bacteria 3776
76 Ga0207657_10041053 3300025919 Bacteria 4094
77 Ga0207652_10071400 3300025921 Bacteria 3017
78 Ga0207686_10094067 3300025934 Bacteria 1986
79 Ga0207709_10064056 3300025935 Bacteria 2306
80 Ga0207661_10043775 3300025944 Bacteria 3534
81 Ga0207661_10140183 3300025944 Bacteria 2080
82 Ga0207679_10255407 3300025945 Bacteria 1492
83 Ga0207640_10263857 3300025981 Bacteria 1344
84 Ga0207658_10122490 3300025986 Bacteria 2076
85 Ga0207703_10047380 3300026035 Bacteria 3465
86 Ga0207702_10015516 3300026078 Bacteria 6308
87 Ga0207641_10094226 3300026088 Bacteria 2626
88 Ga0207676_10006596 3300026095 Bacteria 8212
89 Ga0207674_10013944 3300026116 Bacteria 8890
90 Ga0207675_100325431 3300026118 Bacteria 1502
91 Ga0207683_10180982 3300026121 Bacteria 1911
92 Ga0207698_10082056 3300026142 Bacteria 2605
93 Ga0207428_10040013 3300027907 Bacteria 3805
94 Ga0268266_10005835 3300028379 Bacteria 11392
95 Ga0268266_10162464 3300028379 Bacteria 2022
96 Ga0268266_10241659 3300028379 Bacteria 1667
97 Ga0268264_10183352 3300028381 Bacteria 1903
98 Ga0307408_100247025 3300031548 Bacteria 1470
99 Ga0307409_100004701 3300031995 Bacteria 7728
100 Ga0307411_10287506 3300032005 Bacteria 1312
101 Ga0307415_100135022 3300032126 Bacteria 1875
102 Ga0395900_0091122 3300037418 Bacteria 3133
103 Ga0451833_0033817 3300041491 Bacteria 6943
104 Ga0451837_0459564 3300041494 Bacteria 7080
105 Ga0466972_0113550 3300044658 Bacteria 1279
106 Ga0466965_0062544 3300044683 Bacteria 1862
107 Ga0466966_0042351 3300044684 Bacteria 2923
108 Ga0466963_0150994 3300044694 Bacteria 1613
109 Ga0466957_0084123 3300044842 Bacteria 1985
110 Ga0466960_0013414 3300044901 Bacteria 3482
111 Ga0466967_0093101 3300045976 Bacteria 2741
112 Ga0466967_0096984 3300045976 Bacteria 2690
113 Ga0466967_0196711 3300045976 Bacteria 1907
114 Ga0466967_0196901 3300045976 Bacteria 1907
115 Ga0466967_0210354 3300045976 Bacteria 1844
116 Ga0466967_0230288 3300045976 Bacteria 1764
117 Ga0466967_0366231 3300045976 Bacteria 1397
118 Ga0495641_0056079 3300046461 Bacteria 1787
119 Ga0495608_0335101 3300046511 Bacteria 933
120 Ga0495657_0076658 3300046675 Bacteria 2171
121 Ga0496101_0322993 3300048904 Bacteria 1211
122 Ga0496109_0004554 3300048912 Bacteria 11584
123 Ga0496109_0224855 3300048912 Bacteria 1765
124 Ga0496109_0308706 3300048912 Bacteria 1492
125 Ga0496110_0026461 3300048913 Bacteria 4965
126 Ga0496110_0240404 3300048913 Bacteria 1648
127 Ga0496111_0004306 3300048914 Bacteria 8976
128 Ga0496113_0259324 3300048916 Bacteria 1389
129 Ga0496114_0014156 3300048917 Bacteria 6397
130 Ga0496114_0157131 3300048917 Bacteria 1975
131 Ga0496115_0038828 3300048918 Bacteria 3780
132 Ga0501031_0001799 3300049568 Bacteria 13460
133 Ga0501031_0022939 3300049568 Bacteria 4071
134 Ga0501031_0054742 3300049568 Bacteria 2599
135 Ga0501032_0004451 3300049569 Bacteria 10564
136 Ga0501033_0023656 3300049570 Bacteria 4633
137 Ga0501034_0012560 3300049571 Bacteria 8742
138 Ga0501036_0011255 3300049572 Bacteria 7402
139 Ga0501036_0024107 3300049572 Bacteria 5128
140 Ga0501036_0037753 3300049572 Bacteria 4086
141 Ga0501037_0001667 3300049573 Bacteria 16163
142 Ga0501037_0015292 3300049573 Bacteria 5646
143 Ga0501038_0013643 3300049574 Bacteria 7406
144 Ga0501038_0075757 3300049574 Bacteria 2843
145 Ga0501038_0130084 3300049574 Bacteria 2068
146 Ga0501038_0360883 3300049574 Bacteria 1130
147 Ga0501039_0045115 3300049575 Bacteria 3404
148 Ga0501039_0190592 3300049575 Bacteria 1612
149 Ga0501039_0250318 3300049575 Bacteria 1393
150 Ga0501039_0329114 3300049575 Bacteria 1201
151 Ga0501040_0000851 3300049576 Bacteria 19154
152 Ga0501040_0175762 3300049576 Bacteria 1517
153 Ga0501041_0036687 3300049577 Bacteria 2969
154 Ga0501041_0106638 3300049577 Bacteria 1737
155 Ga0501042_0002694 3300049578 Bacteria 10933
156 Ga0501042_0024633 3300049578 Bacteria 4222
157 Ga0501043_0002895 3300049579 Bacteria 14333
158 Ga0501043_0067415 3300049579 Bacteria 2810
159 Ga0501046_0001625 3300049580 Bacteria 21517
160 Ga0501046_0002171 3300049580 Bacteria 18533
161 Ga0501047_0062126 3300049581 Bacteria 3604
162 Ga0501048_0005436 3300049582 Bacteria 9685
163 Ga0501048_0031337 3300049582 Bacteria 3846
164 Ga0501048_0113418 3300049582 Bacteria 1915
165 Ga0501048_0256470 3300049582 Bacteria 1242
166 Ga0501067_0118941 3300049583 Bacteria 1469
167 Ga0501069_0043149 3300049585 Bacteria 2496
168 Ga0501069_0063286 3300049585 Bacteria 2066
169 Ga0501069_0248410 3300049585 Bacteria 1037
170 Ga0501070_0001775 3300049586 Bacteria 19061
171 Ga0501070_0004580 3300049586 Bacteria 11846
172 Ga0501070_0108940 3300049586 Bacteria 2288
173 Ga0501070_0209641 3300049586 Bacteria 1599
174 Ga0501070_0293041 3300049586 Bacteria 1326
175 Ga0501070_0339450 3300049586 Bacteria 1220
176 Ga0501071_0003009 3300049587 Bacteria 10431
177 Ga0501071_0031462 3300049587 Bacteria 3762
178 Ga0501071_0057482 3300049587 Bacteria 2812
179 Ga0501071_0259403 3300049587 Bacteria 1312
180 Ga0501072_0008259 3300049588 Bacteria 7909
181 Ga0501072_0220573 3300049588 Bacteria 1511
182 Ga0501073_0010004 3300049589 Bacteria 6974
183 Ga0501073_0079139 3300049589 Bacteria 2288
184 Ga0501073_0154311 3300049589 Bacteria 1591
185 Ga0501073_0362906 3300049589 Bacteria 1000
186 Ga0501074_0000499 3300049590 Bacteria 24035
187 Ga0501074_0021447 3300049590 Bacteria 4690
188 Ga0501074_0024154 3300049590 Bacteria 4417
189 Ga0501074_0077600 3300049590 Bacteria 2384
190 Ga0501075_0087728 3300049591 Bacteria 2358
191 Ga0501075_0110711 3300049591 Bacteria 2088
192 Ga0501075_0142267 3300049591 Bacteria 1828
193 Ga0501076_0010057 3300049592 Bacteria 7001
194 Ga0501076_0195534 3300049592 Bacteria 1651
195 Ga0501077_0022654 3300049593 Bacteria 3980
196 Ga0501079_0028632 3300049741 Bacteria 4275
197 Ga0501080_0073568 3300049742 Bacteria 3179
198 Ga0501080_0088595 3300049742 Bacteria 2875
199 Ga0501080_0143957 3300049742 Bacteria 2203
200 Ga0501080_0425469 3300049742 Bacteria 1192
201 Ga0501081_0098619 3300049743 Bacteria 2063
202 Ga0501083_0304590 3300049744 Bacteria 1036
203 Ga0501035_0026643 3300049822 Bacteria 5288
204 Ga0501035_0303512 3300049822 Bacteria 1345
205 Ga0501044_0391931 3300049823 Bacteria 1303
206 nmdc:mga03n38_103736_c1 3300050490 Bacteria 1375
207 nmdc:mga03n38_34267_c1 3300050490 Bacteria 2167
208 nmdc:mga03n38_40301_c1 3300050490 Bacteria 2029
209 nmdc:mga00v17_12426_c1 3300050491 Bacteria 4698
210 nmdc:mga0yw44_2413_c1 3300050492 Bacteria 7956
211 nmdc:mga0yw44_491848_c1 3300050492 Bacteria 832
212 nmdc:mga06z11_162861_c1 3300050494 Bacteria 1276
213 nmdc:mga05p37_892_c1 3300050507 Bacteria 33638
214 nmdc:mga09592_3033_c1 3300050508 Bacteria 13622
215 nmdc:mga0qj67_49353_c1 3300050509 Bacteria 3327
216 nmdc:mga06r32_31761_c1 3300050510 Bacteria 4963
217 nmdc:mga06r32_40421_c1 3300050510 Bacteria 4428
218 nmdc:mga08y16_61516_c1 3300050511 Bacteria 3921
219 Ga0495601_0279447 3300053077 Bacteria 1089
220 Ga0495595_0068136 3300053084 Bacteria 1678
221 Ga0495619_0008625 3300053085 Bacteria 6449
222 Ga0501084_0034496 3300054114 Bacteria 4231
223 Ga0501084_0165177 3300054114 Bacteria 1868
224 Ga0501082_0009906 3300060353 Bacteria 8214
225 Ga0501082_0051385 3300060353 Bacteria 3553
226 Ga0501082_0221341 3300060353 Bacteria 1647
227 2643828359 2643221561 Bacteria 4984412
228 2644090326 2643221615 Bacteria 5487866
229 2644320172 2643221657 Bacteria 5490246
230 2644535174 2643221696 Bacteria 5431823
231 8054613257 8054609563 Bacteria 5170090
232 Ga0070683_100052448
233 LJQas_1003245
234 rootH1_10016081
235 rootL2_10199468
236 Ga0070658_10054286
237 Ga0070658_10139730
238 Ga0070683_100010924
239 Ga0070683_100235539
240 Ga0068869_100475507
241 Ga0070666_10372545
242 Ga0070680_100130530
243 Ga0070682_100010633
244 Ga0070668_100256894
245 Ga0070681_10209221
246 Ga0070685_10108376
247 Ga0070679_100021596
248 Ga0070684_100036089
249 Ga0070684_100044254
250 Ga0070684_100075859
251 Ga0068853_100160073
252 Ga0070665_100000301
253 Ga0070665_100184200
254 Ga0070665_100190850
255 Ga0068852_100062000
256 Ga0068859_100435581
257 Ga0068864_100048001
258 Ga0068861_100249447
259 Ga0068851_10153299
260 Ga0068858_100128010
261 Ga0068860_100186753
262 Ga0081455_10000134
263 Ga0081455_10000782
264 Ga0081455_10009159
265 Ga0081455_10181331
266 Ga0081455_10208591
267 Ga0081538_10000249
268 Ga0081538_10045066
269 Ga0075365_10001446
270 Ga0075368_10000274
271 Ga0075368_10037619
272 Ga0075363_100009794
273 Ga0075363_100086355
274 Ga0075364_10010905
275 Ga0075370_10070517
276 Ga0075428_100023219
277 Ga0075430_100063428
278 Ga0075431_100001150
279 Ga0075431_100045687
280 Ga0075429_100016315
281 Ga0068865_100065801
282 Ga0097620_100435590
283 Ga0111539_10021410
284 Ga0105245_10027858
285 Ga0114129_10049130
286 Ga0105243_10139797
287 Ga0105243_10184458
288 Ga0105242_10095269
289 Ga0105248_10107898
290 Ga0105237_10186525
291 Ga0105249_10067593
292 Ga0105249_10133437
293 Ga0105239_10008043
294 Ga0105246_10005379
295 Ga0157369_10029972
296 Ga0163162_10231547
297 Ga0157372_10002981
298 Ga0157375_10032351
299 Ga0157375_10123331
300 Ga0157375_10268824
301 Ga0163163_10096552
302 Ga0157377_10179378
303 Ga0157379_10023886
304 Ga0207705_10142571
305 Ga0207707_10046598
306 Ga0207657_10041053
307 Ga0207652_10071400
308 Ga0207686_10094067
309 Ga0207709_10064056
310 Ga0207661_10043775
311 Ga0207661_10140183
312 Ga0207679_10255407
313 Ga0207640_10263857
314 Ga0207658_10122490
315 Ga0207703_10047380
316 Ga0207702_10015516
317 Ga0207641_10094226
318 Ga0207676_10006596
319 Ga0207674_10013944
320 Ga0207675_100325431
321 Ga0207683_10180982
322 Ga0207698_10082056
323 Ga0207428_10040013
324 Ga0268266_10005835
325 Ga0268266_10162464
326 Ga0268266_10241659
327 Ga0268264_10183352
328 Ga0307408_100247025
329 Ga0307409_100004701
330 Ga0307411_10287506
331 Ga0307415_100135022
332 Ga0395900_0091122
333 Ga0451833_0033817
334 Ga0451837_0459564
335 Ga0466972_0113550
336 Ga0466965_0062544
337 Ga0466966_0042351
338 Ga0466963_0150994
339 Ga0466957_0084123
340 Ga0466960_0013414
341 Ga0466967_0093101
342 Ga0466967_0096984
343 Ga0466967_0196711
344 Ga0466967_0196901
345 Ga0466967_0210354
346 Ga0466967_0230288
347 Ga0466967_0366231
348 Ga0495641_0056079
349 Ga0495608_0335101
350 Ga0495657_0076658
351 Ga0496101_0322993
352 Ga0496109_0004554
353 Ga0496109_0224855
354 Ga0496109_0308706
355 Ga0496110_0026461
356 Ga0496110_0240404
357 Ga0496111_0004306
358 Ga0496113_0259324
359 Ga0496114_0014156
360 Ga0496114_0157131
361 Ga0496115_0038828
362 Ga0501031_0001799
363 Ga0501031_0022939
364 Ga0501031_0054742
365 Ga0501032_0004451
366 Ga0501033_0023656
367 Ga0501034_0012560
368 Ga0501036_0011255
369 Ga0501036_0024107
370 Ga0501036_0037753
371 Ga0501037_0001667
372 Ga0501037_0015292
373 Ga0501038_0013643
374 Ga0501038_0075757
375 Ga0501038_0130084
376 Ga0501038_0360883
377 Ga0501039_0045115
378 Ga0501039_0190592
379 Ga0501039_0250318
380 Ga0501039_0329114
381 Ga0501040_0000851
382 Ga0501040_0175762
383 Ga0501041_0036687
384 Ga0501041_0106638
385 Ga0501042_0002694
386 Ga0501042_0024633
387 Ga0501043_0002895
388 Ga0501043_0067415
389 Ga0501046_0001625
390 Ga0501046_0002171
391 Ga0501047_0062126
392 Ga0501048_0005436
393 Ga0501048_0031337
394 Ga0501048_0113418
395 Ga0501048_0256470
396 Ga0501067_0118941
397 Ga0501069_0043149
398 Ga0501069_0063286
399 Ga0501069_0248410
400 Ga0501070_0001775
401 Ga0501070_0004580
402 Ga0501070_0108940
403 Ga0501070_0209641
404 Ga0501070_0293041
405 Ga0501070_0339450
406 Ga0501071_0003009
407 Ga0501071_0031462
408 Ga0501071_0057482
409 Ga0501071_0259403
410 Ga0501072_0008259
411 Ga0501072_0220573
412 Ga0501073_0010004
413 Ga0501073_0079139
414 Ga0501073_0154311
415 Ga0501073_0362906
416 Ga0501074_0000499
417 Ga0501074_0021447
418 Ga0501074_0024154
419 Ga0501074_0077600
420 Ga0501075_0087728
421 Ga0501075_0110711
422 Ga0501075_0142267
423 Ga0501076_0010057
424 Ga0501076_0195534
425 Ga0501077_0022654
426 Ga0501079_0028632
427 Ga0501080_0073568
428 Ga0501080_0088595
429 Ga0501080_0143957
430 Ga0501080_0425469
431 Ga0501081_0098619
432 Ga0501083_0304590
433 Ga0501035_0026643
434 Ga0501035_0303512
435 Ga0501044_0391931
436 nmdc:mga03n38_103736_c1
437 nmdc:mga03n38_34267_c1
438 nmdc:mga03n38_40301_c1
439 nmdc:mga00v17_12426_c1
440 nmdc:mga0yw44_2413_c1
441 nmdc:mga0yw44_491848_c1
442 nmdc:mga06z11_162861_c1
443 nmdc:mga05p37_892_c1
444 nmdc:mga09592_3033_c1
445 nmdc:mga0qj67_49353_c1
446 nmdc:mga06r32_31761_c1
447 nmdc:mga06r32_40421_c1
448 nmdc:mga08y16_61516_c1
449 Ga0495601_0279447
450 Ga0495595_0068136
451 Ga0495619_0008625
452 Ga0501084_0034496
453 Ga0501084_0165177
454 Ga0501082_0009906
455 Ga0501082_0051385
456 Ga0501082_0221341
457 2643828359
458 2644090326
459 2644320172
460 2644535174
461 8054613257

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14561

TPR_20

Tetratricopeptide repeat

231

320

0.98

PF00085

Thioredoxin

Thioredoxin

47

151

0.88

Map