F342551

General Info

Members Datasets Scaffolds Average Seq Length
229 197 458 321

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2918501144|2918502299
Length 383
Sequence RSAAPTKTRTKTPTEAPANAPGRGSSRDLSTVALAVTEGMRQFELSVAYEVFGPPPSAVTGPWYDVSLCGPSTVRIGRFRLEPDGGFDRLARAGTVIVPALAETDEAPPAELVDAVRAAHEAGARVASLCTGAFVLAAAGLLDGRRATTHWAHTEELAARHPRVEVDPDVLYVDDGRVLTSAGKAAAMDLCLHLVRLDHGSAVANTVARSLVVPPHRAGGQAQFVTTPVPARDDHPLGDLLPWVMERLDQPLTVDDLARRARMSSRNLGRHFRSVTGTTPLQWLLTQRIRHAQELLESTDESVEGIAAATGMGTATTLRRHFNRTVGVPPDAYRRTFRARARTRIRPGEDDGSNPAGNPAGNPAGSPAGTPDGGTAPKWSPMA

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
7 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
8 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
9 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
10 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
11 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
12 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
13 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
14 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
15 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
16 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
17 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
18 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
19 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
21 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
22 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
23 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
24 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
25 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
26 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
27 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
44 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
45 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
46 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
47 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
48 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
49 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
50 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
51 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
52 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
53 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
54 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
55 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
56 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
57 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
58 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
59 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
60 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
61 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
62 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
63 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
64 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
65 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
66 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
67 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
68 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
69 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
70 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
71 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
72 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
73 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
74 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
75 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
76 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
77 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
78 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
79 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
80 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
81 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
82 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
83 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
84 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
85 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
86 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
87 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
88 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
89 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
90 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
91 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
92 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
93 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
94 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
95 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
96 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
97 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
98 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
99 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
100 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
101 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
102 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
103 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
104 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
105 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
106 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
107 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
108 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
109 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
110 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
111 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
112 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
113 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
114 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
115 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
116 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
117 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
118 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
124 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
125 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
126 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
128 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
129 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
130 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
131 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
132 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
133 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
134 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
135 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
136 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
137 2501939600 Micromonospora sp. L5 Isolate Unclassified
138 2558860280 Kutzneria sp. 744 Isolate Unclassified
139 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
140 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
141 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
142 2643221670 Streptomyces sp. Root431 Isolate Unclassified
143 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
144 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
145 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
146 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
147 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
148 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
149 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
150 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
151 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
152 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
153 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
154 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
155 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
156 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
157 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
158 2858868258 Micromonospora sp. MH33 Isolate Unclassified
159 2858882152 Micromonospora noduli MED15 Isolate Nodule
160 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
161 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
162 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
163 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
164 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
165 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
166 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
167 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
168 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
169 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
170 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
171 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
172 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
173 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
174 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
175 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
176 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
177 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
178 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
179 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
180 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
181 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
182 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
183 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
184 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
185 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
186 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
187 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
188 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
189 649633069 Micromonospora sp. L5 Isolate Unclassified
190 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
191 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
192 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
193 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
194 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
195 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
196 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule
197 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 72.49
Metatranscriptomes 0
Isolates 27.51

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.06
Nodule 2.18
Rhizoplane 1.75
Rhizosphere 69.87
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10008779 3300005327 Bacteria 8121
2 Ga0070680_100069235 3300005336 Bacteria 2897
3 Ga0068868_100014817 3300005338 Bacteria 5755
4 Ga0070661_100067155 3300005344 Bacteria 2635
5 Ga0070668_100007963 3300005347 Bacteria 7870
6 Ga0070663_100000879 3300005455 Bacteria 16361
7 Ga0070662_100001447 3300005457 Bacteria 14632
8 Ga0070679_100037283 3300005530 Bacteria 4828
9 Ga0070684_100082465 3300005535 Bacteria 2847
10 Ga0070664_100000171 3300005564 Bacteria 45394
11 Ga0068856_100201487 3300005614 Bacteria 2005
12 Ga0068864_100059153 3300005618 Bacteria 3315
13 Ga0068870_10123341 3300005840 Bacteria 1495
14 Ga0068858_100130869 3300005842 Bacteria 2353
15 Ga0068862_100103616 3300005844 Bacteria 2492
16 Ga0075363_100002120 3300006048 Bacteria 7961
17 Ga0075363_100099001 3300006048 Bacteria 1612
18 Ga0075370_10016774 3300006353 Bacteria 3945
19 Ga0105251_10035698 3300009011 Bacteria 2451
20 Ga0111539_10001751 3300009094 Bacteria 28833
21 Ga0105245_10027318 3300009098 Bacteria 5028
22 Ga0105243_10155573 3300009148 Bacteria 1966
23 Ga0105246_10247750 3300011119 Bacteria 1412
24 Ga0157369_10119196 3300013105 Bacteria 2801
25 Ga0157372_10259347 3300013307 Bacteria 2018
26 Ga0157377_10105442 3300014745 Bacteria 1687
27 Ga0183367_1008 3300015688 Bacteria 490626
28 Ga0207643_10077160 3300025908 Bacteria 1926
29 Ga0207660_10152370 3300025917 Bacteria 1777
30 Ga0207649_10046011 3300025920 Bacteria 2678
31 Ga0207687_10032954 3300025927 Bacteria 3512
32 Ga0207706_10010890 3300025933 Bacteria 8298
33 Ga0207661_10003421 3300025944 Bacteria 11009
34 Ga0207679_10033634 3300025945 Bacteria 3609
35 Ga0207668_10002621 3300025972 Bacteria 10529
36 Ga0207677_10009601 3300026023 Bacteria 5445
37 Ga0207703_10124542 3300026035 Bacteria 2217
38 Ga0207639_10361541 3300026041 Bacteria 1299
39 Ga0207678_10000142 3300026067 Bacteria 58921
40 Ga0207678_10056003 3300026067 Bacteria 3396
41 Ga0207676_10137789 3300026095 Bacteria 2085
42 Ga0207674_10032652 3300026116 Bacteria 5457
43 Ga0207674_10464919 3300026116 Bacteria 1223
44 Ga0207675_100142637 3300026118 Bacteria 2276
45 Ga0268266_10113421 3300028379 Bacteria 2404
46 Ga0307512_10043508 3300030522 Bacteria 3703
47 Ga0307513_10017836 3300031456 Bacteria 8502
48 Ga0307513_10195447 3300031456 Bacteria 1869
49 Ga0307509_10021584 3300031507 Bacteria 7276
50 Ga0307509_10047861 3300031507 Bacteria 4597
51 Ga0307514_10005869 3300031649 Bacteria 10834
52 Ga0307514_10090065 3300031649 Bacteria 2239
53 Ga0307516_10004686 3300031730 Bacteria 16740
54 Ga0307518_10000953 3300031838 Bacteria 21580
55 Ga0307518_10017286 3300031838 Bacteria 5177
56 Ga0307406_10247007 3300031901 Bacteria 1342
57 Ga0307409_100146617 3300031995 Bacteria 2042
58 Ga0307415_100030748 3300032126 Bacteria 3451
59 Ga0395901_0089652 3300038443 Bacteria 3218
60 Ga0395901_0386360 3300038443 Bacteria 1440
61 Ga0439436_0006019 3300041404 Bacteria 3718
62 Ga0439439_0001271 3300041406 Bacteria 4924
63 Ga0439439_0004771 3300041406 Bacteria 3070
64 Ga0451853_3236367 3300041512 Bacteria 2846
65 Ga0439449_0001569 3300042007 Bacteria 8955
66 Ga0439457_000697 3300042014 Bacteria 9931
67 Ga0439457_001685 3300042014 Bacteria 6547
68 Ga0439462_0016100 3300042015 Bacteria 1930
69 Ga0439458_0003028 3300042157 Bacteria 4006
70 Ga0466969_0002786 3300044656 Bacteria 9337
71 Ga0466969_0013151 3300044656 Bacteria 4361
72 Ga0466972_0004561 3300044658 Bacteria 6941
73 Ga0466972_0015463 3300044658 Bacteria 3814
74 Ga0466966_0004371 3300044684 Bacteria 9325
75 Ga0466966_0022020 3300044684 Bacteria 4184
76 Ga0466961_0034039 3300044693 Bacteria 3272
77 Ga0466961_0077787 3300044693 Bacteria 2101
78 Ga0466970_0006841 3300044765 Bacteria 5708
79 Ga0466957_0149784 3300044842 Bacteria 1508
80 Ga0466967_0014743 3300045976 Bacteria 6105
81 Ga0495592_0093715 3300046454 Bacteria 2150
82 Ga0495603_0001472 3300046455 Bacteria 13714
83 Ga0495603_0005697 3300046455 Bacteria 7446
84 Ga0495629_0006300 3300046459 Bacteria 8804
85 Ga0495629_0142365 3300046459 Bacteria 1668
86 Ga0495651_0021331 3300046462 Bacteria 5034
87 Ga0495582_0009794 3300046473 Bacteria 5279
88 Ga0495605_0008851 3300046474 Bacteria 5676
89 Ga0495639_0133880 3300046475 Bacteria 1188
90 Ga0495662_0021834 3300046476 Bacteria 3093
91 Ga0495664_0029220 3300046477 Bacteria 3223
92 Ga0495585_0161886 3300046492 Bacteria 1161
93 Ga0495594_0010375 3300046499 Bacteria 4832
94 Ga0495594_0091652 3300046499 Bacteria 1703
95 Ga0495596_0055321 3300046500 Bacteria 1551
96 Ga0495606_0144669 3300046507 Bacteria 1401
97 Ga0495616_0021309 3300046513 Bacteria 3511
98 Ga0495618_0007708 3300046514 Bacteria 6511
99 Ga0495620_0056392 3300046515 Bacteria 1652
100 Ga0495628_0013718 3300046516 Bacteria 6810
101 Ga0495648_0008361 3300046524 Bacteria 8155
102 Ga0495652_0000664 3300046529 Bacteria 39960
103 Ga0495652_0001811 3300046529 Bacteria 22721
104 Ga0495586_0130519 3300046535 Bacteria 1407
105 Ga0495587_0098895 3300046536 Bacteria 1682
106 Ga0495597_0014325 3300046542 Bacteria 3778
107 Ga0495645_0030517 3300046543 Bacteria 3925
108 Ga0495645_0048271 3300046543 Bacteria 3101
109 Ga0495668_0000920 3300046616 Bacteria 32866
110 Ga0495634_0028427 3300046642 Bacteria 3881
111 Ga0495611_0002994 3300046648 Bacteria 7532
112 Ga0495611_0038676 3300046648 Bacteria 2122
113 Ga0495625_0001592 3300046660 Bacteria 26894
114 Ga0495625_0010156 3300046660 Bacteria 7818
115 Ga0495635_0003647 3300046663 Bacteria 10680
116 Ga0495635_0004021 3300046663 Bacteria 10211
117 Ga0495588_0002313 3300046674 Bacteria 8159
118 Ga0495588_0165136 3300046674 Bacteria 1171
119 Ga0495657_0001983 3300046675 Bacteria 17446
120 Ga0495657_0049281 3300046675 Bacteria 2838
121 Ga0495623_0005639 3300046679 Bacteria 8170
122 Ga0495646_0002626 3300046680 Bacteria 11091
123 Ga0495646_0006975 3300046680 Bacteria 7175
124 Ga0495613_0000987 3300046689 Bacteria 21630
125 Ga0495624_0061568 3300046690 Bacteria 2351
126 Ga0495649_0006914 3300046694 Bacteria 7017
127 Ga0495589_0004197 3300046794 Bacteria 7705
128 Ga0495600_0036600 3300046809 Bacteria 3190
129 Ga0495604_0012517 3300047317 Bacteria 6748
130 Ga0495636_0012201 3300047318 Bacteria 3402
131 Ga0495672_0049105 3300047320 Bacteria 2499
132 Ga0495676_0039993 3300047321 Bacteria 3875
133 Ga0495683_0023671 3300047323 Bacteria 3156
134 Ga0495687_015917 3300047443 Bacteria 3801
135 Ga0495687_057911 3300047443 Bacteria 1609
136 Ga0495675_0005429 3300047444 Bacteria 7772
137 Ga0495675_0104822 3300047444 Bacteria 1767
138 Ga0495685_030755 3300047447 Bacteria 1846
139 Ga0495593_0007561 3300047673 Bacteria 6348
140 Ga0495614_0008795 3300048089 Bacteria 4483
141 Ga0495626_0000315 3300048091 Bacteria 50964
142 Ga0496108_0282777 3300048911 Bacteria 1444
143 Ga0496109_0063898 3300048912 Bacteria 3367
144 Ga0496112_0038868 3300048915 Bacteria 4649
145 Ga0496112_0046267 3300048915 Bacteria 4267
146 Ga0501031_0019846 3300049568 Bacteria 4381
147 Ga0501036_0158134 3300049572 Bacteria 1911
148 Ga0501038_0032581 3300049574 Bacteria 4597
149 Ga0501042_0014215 3300049578 Bacteria 5431
150 Ga0501047_0044716 3300049581 Bacteria 4280
151 Ga0501047_0280232 3300049581 Bacteria 1512
152 Ga0501068_0060008 3300049584 Bacteria 2309
153 Ga0501079_0164873 3300049741 Bacteria 1728
154 Ga0501081_0120010 3300049743 Bacteria 1872
155 Ga0501044_0031934 3300049823 Bacteria 5537
156 Ga0501045_0023652 3300049824 Bacteria 4407
157 nmdc:mga07m45_16394_c1 3300050496 Bacteria 3967
158 Ga0495601_0006869 3300053077 Bacteria 6666
159 Ga0495601_0029470 3300053077 Bacteria 3404
160 Ga0495612_0000574 3300053078 Bacteria 14798
161 Ga0495612_0002323 3300053078 Bacteria 7835
162 Ga0495619_0038205 3300053085 Bacteria 3131
163 Ga0500646_0000105 3300053090 Bacteria 24117
164 Ga0500577_0020802 3300053142 Bacteria 2152
165 Ga0500600_0020697 3300053149 Bacteria 3954
166 Ga0501084_0118201 3300054114 Bacteria 2228
167 2918502299 2918501144 Bacteria 8668083
168 2501944703 2501939600 Bacteria 6907073
169 2559423620 2558860280 Bacteria 11429938
170 2586061613 2585427649 Bacteria 9053857
171 2623587616 2622736626 Bacteria 7181580
172 2643942603 2643221587 Bacteria 7586415
173 2644388431 2643221670 Bacteria 6497041
174 2644430062 2643221677 Bacteria 7584031
175 2644442844 2643221678 Bacteria 9540101
176 2785344066 2784746763 Bacteria 9783172
177 2786666857 2786546132 Bacteria 10419719
178 2791917139 2791354901 Bacteria 8322202
179 2808842740 2808606359 Bacteria 9866990
180 2808916053 2808606375 Bacteria 9466072
181 2809590255 2808606522 Bacteria 9488490
182 2819746226 2818991472 Bacteria 10089953
183 2855673395 2855670206 Bacteria 7120389
184 2855680913 2855676851 Bacteria 7063653
185 2856748234 2856741275 Bacteria 8096094
186 2856860390 2856858025 Bacteria 7255264
187 2857292515 2857288857 Bacteria 7189066
188 2858851509 2858848962 Bacteria 6963058
189 2858872062 2858868258 Bacteria 7683772
190 2858887471 2858882152 Bacteria 7230291
191 2858892595 2858888857 Bacteria 7060307
192 2858897169 2858895516 Bacteria 7378898
193 2861526975 2861520306 Bacteria 8348283
194 2867306883 2867302475 Bacteria 7087181
195 2867319292 2867312974 Bacteria 7058875
196 2867320569 2867319477 Bacteria 7069771
197 2869063983 2869061728 Bacteria 7112407
198 2869070038 2869068681 Bacteria 7205615
199 2873151994 2873151551 Bacteria 8625867
200 2884694504 2884693830 Bacteria 11273186
201 2887482427 2887478801 Bacteria 8972725
202 2891397063 2891395885 Bacteria 9251614
203 2891558081 2891554331 Bacteria 8812224
204 2895438392 2895427314 Bacteria 13147766
205 2895444407 2895442618 Bacteria 11027144
206 2915774281 2915768154 Bacteria 8424322
207 2929223006 2929219909 Bacteria 6984360
208 2929229340 2929226422 Bacteria 7248583
209 2935394255 2935390628 Bacteria 7043367
210 2946072020 2946064051 Bacteria 8957905
211 2946072817 2946072368 Bacteria 8999607
212 2947228421 2947224130 Bacteria 9938529
213 2954007587 2954002825 Bacteria 9173742
214 2954681942 2954673503 Bacteria 9685905
215 2954690982 2954682443 Bacteria 9862841
216 2966605164 2966598605 Bacteria 7676064
217 2990064923 2990059506 Bacteria 9321252
218 2996225384 2996221748 Bacteria 6799777
219 3006327071 3006321560 Bacteria 8247479
220 649811130 649633069 Bacteria 6962533
221 8001787604 8001781756 Bacteria 9586736
222 8025534081 8025530807 Bacteria 8495698
223 8054706235 8054704163 Bacteria 7247792
224 8054737900 8054734606 Bacteria 6947278
225 8055069274 8055066027 Bacteria 9479577
226 8055175211 8055172936 Bacteria 9305943
227 8055180462 8055172936 Bacteria 9305943
228 8055416675 8055412473 Bacteria 6257500
229 8056672114 8056667051 Bacteria 6953971
230 Ga0070658_10008779
231 Ga0070680_100069235
232 Ga0068868_100014817
233 Ga0070661_100067155
234 Ga0070668_100007963
235 Ga0070663_100000879
236 Ga0070662_100001447
237 Ga0070679_100037283
238 Ga0070684_100082465
239 Ga0070664_100000171
240 Ga0068856_100201487
241 Ga0068864_100059153
242 Ga0068870_10123341
243 Ga0068858_100130869
244 Ga0068862_100103616
245 Ga0075363_100002120
246 Ga0075363_100099001
247 Ga0075370_10016774
248 Ga0105251_10035698
249 Ga0111539_10001751
250 Ga0105245_10027318
251 Ga0105243_10155573
252 Ga0105246_10247750
253 Ga0157369_10119196
254 Ga0157372_10259347
255 Ga0157377_10105442
256 Ga0183367_1008
257 Ga0207643_10077160
258 Ga0207660_10152370
259 Ga0207649_10046011
260 Ga0207687_10032954
261 Ga0207706_10010890
262 Ga0207661_10003421
263 Ga0207679_10033634
264 Ga0207668_10002621
265 Ga0207677_10009601
266 Ga0207703_10124542
267 Ga0207639_10361541
268 Ga0207678_10000142
269 Ga0207678_10056003
270 Ga0207676_10137789
271 Ga0207674_10032652
272 Ga0207674_10464919
273 Ga0207675_100142637
274 Ga0268266_10113421
275 Ga0307512_10043508
276 Ga0307513_10017836
277 Ga0307513_10195447
278 Ga0307509_10021584
279 Ga0307509_10047861
280 Ga0307514_10005869
281 Ga0307514_10090065
282 Ga0307516_10004686
283 Ga0307518_10000953
284 Ga0307518_10017286
285 Ga0307406_10247007
286 Ga0307409_100146617
287 Ga0307415_100030748
288 Ga0395901_0089652
289 Ga0395901_0386360
290 Ga0439436_0006019
291 Ga0439439_0001271
292 Ga0439439_0004771
293 Ga0451853_3236367
294 Ga0439449_0001569
295 Ga0439457_000697
296 Ga0439457_001685
297 Ga0439462_0016100
298 Ga0439458_0003028
299 Ga0466969_0002786
300 Ga0466969_0013151
301 Ga0466972_0004561
302 Ga0466972_0015463
303 Ga0466966_0004371
304 Ga0466966_0022020
305 Ga0466961_0034039
306 Ga0466961_0077787
307 Ga0466970_0006841
308 Ga0466957_0149784
309 Ga0466967_0014743
310 Ga0495592_0093715
311 Ga0495603_0001472
312 Ga0495603_0005697
313 Ga0495629_0006300
314 Ga0495629_0142365
315 Ga0495651_0021331
316 Ga0495582_0009794
317 Ga0495605_0008851
318 Ga0495639_0133880
319 Ga0495662_0021834
320 Ga0495664_0029220
321 Ga0495585_0161886
322 Ga0495594_0010375
323 Ga0495594_0091652
324 Ga0495596_0055321
325 Ga0495606_0144669
326 Ga0495616_0021309
327 Ga0495618_0007708
328 Ga0495620_0056392
329 Ga0495628_0013718
330 Ga0495648_0008361
331 Ga0495652_0000664
332 Ga0495652_0001811
333 Ga0495586_0130519
334 Ga0495587_0098895
335 Ga0495597_0014325
336 Ga0495645_0030517
337 Ga0495645_0048271
338 Ga0495668_0000920
339 Ga0495634_0028427
340 Ga0495611_0002994
341 Ga0495611_0038676
342 Ga0495625_0001592
343 Ga0495625_0010156
344 Ga0495635_0003647
345 Ga0495635_0004021
346 Ga0495588_0002313
347 Ga0495588_0165136
348 Ga0495657_0001983
349 Ga0495657_0049281
350 Ga0495623_0005639
351 Ga0495646_0002626
352 Ga0495646_0006975
353 Ga0495613_0000987
354 Ga0495624_0061568
355 Ga0495649_0006914
356 Ga0495589_0004197
357 Ga0495600_0036600
358 Ga0495604_0012517
359 Ga0495636_0012201
360 Ga0495672_0049105
361 Ga0495676_0039993
362 Ga0495683_0023671
363 Ga0495687_015917
364 Ga0495687_057911
365 Ga0495675_0005429
366 Ga0495675_0104822
367 Ga0495685_030755
368 Ga0495593_0007561
369 Ga0495614_0008795
370 Ga0495626_0000315
371 Ga0496108_0282777
372 Ga0496109_0063898
373 Ga0496112_0038868
374 Ga0496112_0046267
375 Ga0501031_0019846
376 Ga0501036_0158134
377 Ga0501038_0032581
378 Ga0501042_0014215
379 Ga0501047_0044716
380 Ga0501047_0280232
381 Ga0501068_0060008
382 Ga0501079_0164873
383 Ga0501081_0120010
384 Ga0501044_0031934
385 Ga0501045_0023652
386 nmdc:mga07m45_16394_c1
387 Ga0495601_0006869
388 Ga0495601_0029470
389 Ga0495612_0000574
390 Ga0495612_0002323
391 Ga0495619_0038205
392 Ga0500646_0000105
393 Ga0500577_0020802
394 Ga0500600_0020697
395 Ga0501084_0118201
396 2918502299
397 2501944703
398 2559423620
399 2586061613
400 2623587616
401 2643942603
402 2644388431
403 2644430062
404 2644442844
405 2785344066
406 2786666857
407 2791917139
408 2808842740
409 2808916053
410 2809590255
411 2819746226
412 2855673395
413 2855680913
414 2856748234
415 2856860390
416 2857292515
417 2858851509
418 2858872062
419 2858887471
420 2858892595
421 2858897169
422 2861526975
423 2867306883
424 2867319292
425 2867320569
426 2869063983
427 2869070038
428 2873151994
429 2884694504
430 2887482427
431 2891397063
432 2891558081
433 2895438392
434 2895444407
435 2915774281
436 2929223006
437 2929229340
438 2935394255
439 2946072020
440 2946072817
441 2947228421
442 2954007587
443 2954681942
444 2954690982
445 2966605164
446 2990064923
447 2996225384
448 3006327071
449 649811130
450 8001787604
451 8025534081
452 8054706235
453 8054737900
454 8055069274
455 8055175211
456 8055180462
457 8055416675
458 8056672114

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12833

HTH_18

Helix-turn-helix domain

257

336

0.97

PF00165

HTH_AraC

Bacterial regulatory helix-turn-helix proteins, AraC family

246

285

0.95

PF01965

DJ-1_PfpI

DJ-1/PfpI family

30

197

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
3lsg-assembly1.cif.gz_A the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.9588 212 306
3lsg-assembly2.cif.gz_D the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.9442 212 298
3lsg-assembly3.cif.gz_E the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.9347 212 301
3w6v-assembly1.cif.gz_A crystal structure of the dna-binding domain of adpa, the global transcriptional factor, in complex with a target dna 0.926 208 316
3w6v-assembly1.cif.gz_A crystal structure of the dna-binding domain of adpa, the global transcriptional factor, in complex with a target dna 0.9018 208 316
ID Description Score Start End Superfamily
af_P32677_219_275_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9704 258 309 1.10.10.60
3lsgA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9657 262 306 1.10.10.60
af_P77379_178_282_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9507 209 306 1.10.10.60
5suwA03 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9411 253 309 1.10.10.60
3lsgC02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9379 262 306 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A3M5WS52-F1-model_v4 ThiJ/PfpI protein 0.9851 99 183 GO:0006355
AF-A0A5Q4T4C4-F1-model_v4 AraC family transcriptional regulator 0.9735 208 307 GO:0003700
GO:0043565
AF-A0A143YUD6-F1-model_v4 Helix turn helix arabinose operon control protein 0.9712 212 306 GO:0003700
GO:0043565
AF-A0A484XH48-F1-model_v4 AraC family transcriptional regulator 0.9689 208 310 GO:0003700
GO:0043565
AF-S4NBD6-F1-model_v4 Putative HTH-type transcriptional regulator GlxA 0.9679 208 309 GO:0003700
GO:0043565

Map