F342189

General Info

Members Datasets Scaffolds Average Seq Length
229 140 458 390

Family's Representative Sequence

Representative Sequence 3300035117|Ga0373953_0009732|Ga0373953_0009732_1949_3310
Length 436
Sequence MKSLSILGSTGSIGRQTLSVVESLPGQFQILALAAGSNLDELLPQIERHHPELVSVATPQLADELSRRLHEKGITPLPAIHHGREGMLAVGTHPGADIVVSAAVGVVGLEATYEAVKLGRTVALSNKEVLVAAGELVMAAAAKSGRELLPVDSEHNAVHQCLRAGNPNVSGVDFSLGARSFSSDINKPGKKARVSAPEESDPSSTSHHPEVRRIVLTASGGPFRKTPLKALESVTPAQALAHPNWRMGNRISIDSATMMNKGFEIIEARWLFGVRPDQIDVVIHPQSTIHSMVEYIDGSVLAQLGPTDMRMPIQYALTYPQRVASNQVALDWAKLRRLDFERASTRRFPCLRLAREAMRKGGAWPCALNAADEIAVAAFLEQRLPFLGIPEVIERVLSRTPRVRFENMDDVLAADAEARRQASEEVDRLSTHPAVA

Samples

Sample ID Description Type Environment
1 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
4 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
16 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
23 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
24 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
25 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
26 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
32 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
36 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
37 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
38 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
41 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
42 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
43 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
44 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
56 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
59 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
60 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
61 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
62 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
63 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
64 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
65 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
66 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
67 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
68 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
69 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
70 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
71 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
72 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
73 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
74 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
75 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
76 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
77 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
78 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
79 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
80 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
81 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
82 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
83 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
84 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
85 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
86 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
87 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
88 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
89 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
90 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
91 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
92 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
93 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
94 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
95 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
96 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
97 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
98 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
99 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
100 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
101 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
102 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
103 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
104 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
105 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
106 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
107 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
108 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
109 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
110 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
111 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
112 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
113 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
114 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
115 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
116 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
117 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
118 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
119 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
120 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
121 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
122 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
123 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
124 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
125 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
126 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
127 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
128 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
129 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
130 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
131 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
132 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
133 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
134 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
135 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
136 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
137 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
138 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
139 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
140 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.69
Metatranscriptomes 1.31
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.49
Rhizosphere 95.2
Stem 0
Stem Tuber 0
Unclassified 3.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373953_0009732 3300035117 Bacteria 3320
2 Ga0070683_100004252 3300005329 Bacteria 11747
3 Ga0070703_10004919 3300005406 Bacteria 3729
4 Ga0070709_10002112 3300005434 Bacteria 10752
5 Ga0070709_10117105 3300005434 Bacteria 1800
6 Ga0070714_100045634 3300005435 Bacteria 3715
7 Ga0070714_100114485 3300005435 Bacteria 2392
8 Ga0070713_100018010 3300005436 Bacteria 5362
9 Ga0070711_100022010 3300005439 Bacteria 4127
10 Ga0070708_100037066 3300005445 Bacteria 4252
11 Ga0070708_100041380 3300005445 Bacteria 4040
12 Ga0070708_100041401 3300005445 Bacteria 4038
13 Ga0070708_100104602 3300005445 Bacteria 2596
14 Ga0070706_100011845 3300005467 Bacteria 8094
15 Ga0070706_100137647 3300005467 Bacteria 2278
16 Ga0070706_100197082 3300005467 Bacteria 1881
17 Ga0070707_100000016 3300005468 Bacteria 141729
18 Ga0070707_100000402 3300005468 Bacteria 42592
19 Ga0070707_100318444 3300005468 Bacteria 1511
20 Ga0070698_100009742 3300005471 Bacteria 10269
21 Ga0070698_100013121 3300005471 Bacteria 8768
22 Ga0070698_100052236 3300005471 Bacteria 4159
23 Ga0070699_100027749 3300005518 Bacteria 4881
24 Ga0070699_100095446 3300005518 Bacteria 2603
25 Ga0070699_100113875 3300005518 Bacteria 2376
26 Ga0070699_100247681 3300005518 Bacteria 1592
27 Ga0070684_100020175 3300005535 Bacteria 5529
28 Ga0070697_100000695 3300005536 Bacteria 25189
29 Ga0070697_100041234 3300005536 Bacteria 3735
30 Ga0070697_100054340 3300005536 Bacteria 3255
31 Ga0070697_100075825 3300005536 Bacteria 2765
32 Ga0070696_100008246 3300005546 Bacteria 6974
33 Ga0070693_100000486 3300005547 Bacteria 17813
34 Ga0070665_100002449 3300005548 Bacteria 20462
35 Ga0070704_100018623 3300005549 Bacteria 4446
36 Ga0068859_100296429 3300005617 Unclassified 1710
37 Ga0068863_100027541 3300005841 Bacteria 5421
38 Ga0068860_100034820 3300005843 Bacteria 4832
39 Ga0081538_10021172 3300005981 Bacteria 4760
40 Ga0070717_10013545 3300006028 Bacteria 6254
41 Ga0070716_100000899 3300006173 Bacteria 12850
42 Ga0070716_100004914 3300006173 Bacteria 6435
43 Ga0070716_100130697 3300006173 Bacteria 1587
44 Ga0070712_100033998 3300006175 Bacteria 3453
45 Ga0068871_100011479 3300006358 Bacteria 6499
46 Ga0075431_100009084 3300006847 Bacteria 9964
47 Ga0075434_100012000 3300006871 Bacteria 8198
48 Ga0075434_100015755 3300006871 Bacteria 7256
49 Ga0075434_100020852 3300006871 Bacteria 6363
50 Ga0075436_100037729 3300006914 Bacteria 3336
51 Ga0075436_100045022 3300006914 Bacteria 3044
52 Ga0097620_100296425 3300006931 Unclassified 1710
53 Ga0075435_100038131 3300007076 Bacteria 3831
54 Ga0075435_100066702 3300007076 Bacteria 2929
55 Ga0099794_10015133 3300007265 Bacteria 3398
56 Ga0099794_10018218 3300007265 Bacteria 3145
57 Ga0099794_10081365 3300007265 Bacteria 1598
58 Ga0099794_10082768 3300007265 Bacteria 1585
59 Ga0105240_10034722 3300009093 Bacteria 6502
60 Ga0105240_10222206 3300009093 Bacteria 2200
61 Ga0105248_10053940 3300009177 Bacteria 4509
62 Ga0105237_10025362 3300009545 Bacteria 6062
63 Ga0157370_10132230 3300013104 Bacteria 2327
64 Ga0157378_10000041 3300013297 Bacteria 112069
65 Ga0157378_10002788 3300013297 Bacteria 15577
66 Ga0157378_10003556 3300013297 Bacteria 13809
67 Ga0163162_10263109 3300013306 Bacteria 1856
68 Ga0163163_10295154 3300014325 Bacteria 1673
69 Ga0157379_10040945 3300014968 Bacteria 4136
70 Ga0157379_10094119 3300014968 Bacteria 2688
71 Ga0157376_10000004 3300014969 Bacteria 508493
72 Ga0157376_10000914 3300014969 Bacteria 19150
73 Ga0213876_10011546 3300021384 Bacteria 4714
74 Ga0228598_1000657 3300024227 Bacteria 7262
75 Ga0207653_10016644 3300025885 Bacteria 2310
76 Ga0207699_10002994 3300025906 Bacteria 8034
77 Ga0207699_10044680 3300025906 Bacteria 2580
78 Ga0207684_10023330 3300025910 Bacteria 5283
79 Ga0207684_10092615 3300025910 Bacteria 2576
80 Ga0207693_10018621 3300025915 Bacteria 5528
81 Ga0207693_10034803 3300025915 Bacteria 3972
82 Ga0207663_10072635 3300025916 Bacteria 2224
83 Ga0207646_10000012 3300025922 Bacteria 367049
84 Ga0207646_10000057 3300025922 Bacteria 158121
85 Ga0207646_10004615 3300025922 Bacteria 14886
86 Ga0207646_10138828 3300025922 Bacteria 2189
87 Ga0207664_10033948 3300025929 Bacteria 3926
88 Ga0207664_10038767 3300025929 Bacteria 3696
89 Ga0207665_10004181 3300025939 Bacteria 9607
90 Ga0207665_10004867 3300025939 Bacteria 8943
91 Ga0207665_10009688 3300025939 Bacteria 6324
92 Ga0207661_10081879 3300025944 Bacteria 2667
93 Ga0207641_10050836 3300026088 Bacteria 3508
94 Ga0209588_1019765 3300027671 Bacteria 2105
95 Ga0209588_1025942 3300027671 Bacteria 1857
96 Ga0209588_1038483 3300027671 Bacteria 1541
97 Ga0265354_1000015 3300028016 Bacteria 26137
98 Ga0265354_1001389 3300028016 Bacteria 3491
99 Ga0268266_10005497 3300028379 Bacteria 11797
100 Ga0268264_10024881 3300028381 Bacteria 4892
101 Ga0265319_1008735 3300028563 Bacteria 4403
102 Ga0265318_10007612 3300028577 Bacteria 4880
103 Ga0265338_10008870 3300028800 Bacteria 12125
104 Ga0265338_10168614 3300028800 Bacteria 1682
105 Ga0265770_1001420 3300030878 Bacteria 3296
106 Ga0265760_10000007 3300031090 Bacteria 117681
107 Ga0265760_10003148 3300031090 Bacteria 4826
108 Ga0265332_10009820 3300031238 Bacteria 4266
109 Ga0265328_10014264 3300031239 Bacteria 3131
110 Ga0265320_10000237 3300031240 Bacteria 45268
111 Ga0265325_10006557 3300031241 Bacteria 7057
112 Ga0265325_10006759 3300031241 Bacteria 6935
113 Ga0265325_10019333 3300031241 Bacteria 3767
114 Ga0265329_10000614 3300031242 Bacteria 18313
115 Ga0265340_10012518 3300031247 Bacteria 4478
116 Ga0265339_10008904 3300031249 Bacteria 6353
117 Ga0265331_10000242 3300031250 Bacteria 65281
118 Ga0265331_10010999 3300031250 Bacteria 4967
119 Ga0265316_10007107 3300031344 Bacteria 10589
120 Ga0265313_10028149 3300031595 Bacteria 2926
121 Ga0265313_10057088 3300031595 Bacteria 1844
122 Ga0265342_10001694 3300031712 Bacteria 20220
123 Ga0316212_1008858 3300033547 Bacteria 1445
124 Ga0373926_0001019 3300035083 Bacteria 8206
125 Ga0373954_0042236 3300035118 Unclassified 2126
126 Ga0373956_0015229 3300035119 Bacteria 3218
127 Ga0373946_0006063 3300035171 Bacteria 4382
128 Ga0373955_0014961 3300035172 Bacteria 3789
129 Ga0373924_0046567 3300035410 Bacteria 1787
130 Ga0373927_0002583 3300035695 Bacteria 13205
131 Ga0373927_0004622 3300035695 Bacteria 9598
132 Ga0373933_0000656 3300035724 Bacteria 21491
133 Ga0373947_0064807 3300035725 Bacteria 2228
134 Ga0373937_0000214 3300036401 Bacteria 55908
135 Ga0373937_0009034 3300036401 Bacteria 8651
136 Ga0373937_0028845 3300036401 Bacteria 5025
137 Ga0373925_0007231 3300037068 Bacteria 8116
138 Ga0395901_0171291 3300038443 Bacteria 2278
139 Ga0436365_1342341 3300039437 Bacteria 8058
140 Ga0439446_0020015 3300042156 Bacteria 1883
141 Ga0439434_0009931 3300042435 Bacteria 2802
142 Ga0451577_0113118 3300042876 Bacteria 2429
143 Ga0453683_0044813 3300044673 Bacteria 2774
144 Ga0453683_0083740 3300044673 Bacteria 1998
145 Ga0453684_0036898 3300044712 Bacteria 6724
146 Ga0453684_0056566 3300044712 Bacteria 5087
147 Ga0451576_0046009 3300045051 Bacteria 4595
148 Ga0495603_0064910 3300046455 Bacteria 2152
149 Ga0495651_0000035 3300046462 Bacteria 98834
150 Ga0495651_0002040 3300046462 Bacteria 15608
151 Ga0495651_0003344 3300046462 Bacteria 12311
152 Ga0495651_0005136 3300046462 Bacteria 9982
153 Ga0495653_0003017 3300046463 Bacteria 13495
154 Ga0495580_0000271 3300046472 Bacteria 41618
155 Ga0495580_0040596 3300046472 Bacteria 3323
156 Ga0495580_0055885 3300046472 Bacteria 2780
157 Ga0495580_0094172 3300046472 Bacteria 2084
158 Ga0495582_0006466 3300046473 Bacteria 6507
159 Ga0495582_0021921 3300046473 Bacteria 3495
160 Ga0495664_0064296 3300046477 Bacteria 2187
161 Ga0495594_0012556 3300046499 Bacteria 4414
162 Ga0495608_0017888 3300046511 Bacteria 4899
163 Ga0495608_0112795 3300046511 Bacteria 1747
164 Ga0495608_0138218 3300046511 Unclassified 1556
165 Ga0495618_0283984 3300046514 Bacteria 1032
166 Ga0495628_0003047 3300046516 Bacteria 15014
167 Ga0495628_0039555 3300046516 Unclassified 3772
168 Ga0495630_0001335 3300046517 Bacteria 16941
169 Ga0495630_0054684 3300046517 Bacteria 2990
170 Ga0495630_0121543 3300046517 Bacteria 1981
171 Ga0495666_0035218 3300046526 Bacteria 2441
172 Ga0495652_0002457 3300046529 Bacteria 19056
173 Ga0495652_0006946 3300046529 Bacteria 10473
174 Ga0495665_0000947 3300046531 Bacteria 15296
175 Ga0495586_0139435 3300046535 Bacteria 1360
176 Ga0495587_0008225 3300046536 Bacteria 6717
177 Ga0495587_0055700 3300046536 Bacteria 2328
178 Ga0495587_0103486 3300046536 Bacteria 1639
179 Ga0495645_0067040 3300046543 Unclassified 2592
180 Ga0495667_0007980 3300046559 Bacteria 7180
181 Ga0495667_0012803 3300046559 Bacteria 5684
182 Ga0495634_0027813 3300046642 Bacteria 3932
183 Ga0495657_0036526 3300046675 Bacteria 3395
184 Ga0495599_0026740 3300046678 Bacteria 3616
185 Ga0495646_0001651 3300046680 Bacteria 13320
186 Ga0495647_0002970 3300046681 Bacteria 5388
187 Ga0495658_0033417 3300046683 Bacteria 2816
188 Ga0495613_0068321 3300046689 Bacteria 2592
189 Ga0495624_0002466 3300046690 Bacteria 14027
190 Ga0495624_0036853 3300046690 Bacteria 3150
191 Ga0495581_0019077 3300047315 Bacteria 3980
192 Ga0495604_0004184 3300047317 Bacteria 11445
193 Ga0495604_0051051 3300047317 Unclassified 3209
194 Ga0495674_0050969 3300047319 Bacteria 3651
195 Ga0495674_0053585 3300047319 Unclassified 3545
196 Ga0495674_0057277 3300047319 Bacteria 3411
197 Ga0495674_0082759 3300047319 Unclassified 2752
198 Ga0495674_0148024 3300047319 Bacteria 1970
199 Ga0495674_0168784 3300047319 Bacteria 1827
200 Ga0495680_0002706 3300047322 Bacteria 17892
201 Ga0495680_0006770 3300047322 Bacteria 10589
202 Ga0495675_0000071 3300047444 Bacteria 70594
203 Ga0495675_0003191 3300047444 Bacteria 9856
204 Ga0495684_0026586 3300047471 Bacteria 4448
205 Ga0495684_0195761 3300047471 Bacteria 1492
206 Ga0495593_0022967 3300047673 Bacteria 3470
207 Ga0495602_0000380 3300048088 Bacteria 41484
208 Ga0495602_0065849 3300048088 Bacteria 3124
209 Ga0496101_0126365 3300048904 Bacteria 1938
210 Ga0496102_0015333 3300048905 Bacteria 6674
211 Ga0496102_0238042 3300048905 Bacteria 1717
212 Ga0496104_0280976 3300048907 Bacteria 1578
213 Ga0496112_0100764 3300048915 Bacteria 2858
214 Ga0496112_0119814 3300048915 Bacteria 2602
215 Ga0496114_0020137 3300048917 Bacteria 5413
216 Ga0496115_0005620 3300048918 Bacteria 9128
217 Ga0501075_0073472 3300049591 Bacteria 2586
218 Ga0501076_0233003 3300049592 Bacteria 1505
219 Ga0501076_0268420 3300049592 Bacteria 1397
220 Ga0501080_0355731 3300049742 Bacteria 1322
221 nmdc:mga06r32_11847_c1 3300050510 Bacteria 7853
222 nmdc:mga0n895_161898_c1 3300050512 Bacteria 2269
223 nmdc:mga0n895_687754_c1 3300050512 Bacteria 1020
224 nmdc:mga0rr50_11440_c1 3300050513 Bacteria 5682
225 nmdc:mga0rr50_122249_c1 3300050513 Bacteria 2074
226 nmdc:mga0rr50_198082_c1 3300050513 Bacteria 1649
227 nmdc:mga08x19_1879_c1 3300050514 Bacteria 12868
228 nmdc:mga08x19_788_c1 3300050514 Bacteria 20243
229 nmdc:mga08x19_8438_c1 3300050514 Bacteria 6136
230 Ga0373953_0009732
231 Ga0070683_100004252
232 Ga0070703_10004919
233 Ga0070709_10002112
234 Ga0070709_10117105
235 Ga0070714_100045634
236 Ga0070714_100114485
237 Ga0070713_100018010
238 Ga0070711_100022010
239 Ga0070708_100037066
240 Ga0070708_100041380
241 Ga0070708_100041401
242 Ga0070708_100104602
243 Ga0070706_100011845
244 Ga0070706_100137647
245 Ga0070706_100197082
246 Ga0070707_100000016
247 Ga0070707_100000402
248 Ga0070707_100318444
249 Ga0070698_100009742
250 Ga0070698_100013121
251 Ga0070698_100052236
252 Ga0070699_100027749
253 Ga0070699_100095446
254 Ga0070699_100113875
255 Ga0070699_100247681
256 Ga0070684_100020175
257 Ga0070697_100000695
258 Ga0070697_100041234
259 Ga0070697_100054340
260 Ga0070697_100075825
261 Ga0070696_100008246
262 Ga0070693_100000486
263 Ga0070665_100002449
264 Ga0070704_100018623
265 Ga0068859_100296429
266 Ga0068863_100027541
267 Ga0068860_100034820
268 Ga0081538_10021172
269 Ga0070717_10013545
270 Ga0070716_100000899
271 Ga0070716_100004914
272 Ga0070716_100130697
273 Ga0070712_100033998
274 Ga0068871_100011479
275 Ga0075431_100009084
276 Ga0075434_100012000
277 Ga0075434_100015755
278 Ga0075434_100020852
279 Ga0075436_100037729
280 Ga0075436_100045022
281 Ga0097620_100296425
282 Ga0075435_100038131
283 Ga0075435_100066702
284 Ga0099794_10015133
285 Ga0099794_10018218
286 Ga0099794_10081365
287 Ga0099794_10082768
288 Ga0105240_10034722
289 Ga0105240_10222206
290 Ga0105248_10053940
291 Ga0105237_10025362
292 Ga0157370_10132230
293 Ga0157378_10000041
294 Ga0157378_10002788
295 Ga0157378_10003556
296 Ga0163162_10263109
297 Ga0163163_10295154
298 Ga0157379_10040945
299 Ga0157379_10094119
300 Ga0157376_10000004
301 Ga0157376_10000914
302 Ga0213876_10011546
303 Ga0228598_1000657
304 Ga0207653_10016644
305 Ga0207699_10002994
306 Ga0207699_10044680
307 Ga0207684_10023330
308 Ga0207684_10092615
309 Ga0207693_10018621
310 Ga0207693_10034803
311 Ga0207663_10072635
312 Ga0207646_10000012
313 Ga0207646_10000057
314 Ga0207646_10004615
315 Ga0207646_10138828
316 Ga0207664_10033948
317 Ga0207664_10038767
318 Ga0207665_10004181
319 Ga0207665_10004867
320 Ga0207665_10009688
321 Ga0207661_10081879
322 Ga0207641_10050836
323 Ga0209588_1019765
324 Ga0209588_1025942
325 Ga0209588_1038483
326 Ga0265354_1000015
327 Ga0265354_1001389
328 Ga0268266_10005497
329 Ga0268264_10024881
330 Ga0265319_1008735
331 Ga0265318_10007612
332 Ga0265338_10008870
333 Ga0265338_10168614
334 Ga0265770_1001420
335 Ga0265760_10000007
336 Ga0265760_10003148
337 Ga0265332_10009820
338 Ga0265328_10014264
339 Ga0265320_10000237
340 Ga0265325_10006557
341 Ga0265325_10006759
342 Ga0265325_10019333
343 Ga0265329_10000614
344 Ga0265340_10012518
345 Ga0265339_10008904
346 Ga0265331_10000242
347 Ga0265331_10010999
348 Ga0265316_10007107
349 Ga0265313_10028149
350 Ga0265313_10057088
351 Ga0265342_10001694
352 Ga0316212_1008858
353 Ga0373926_0001019
354 Ga0373954_0042236
355 Ga0373956_0015229
356 Ga0373946_0006063
357 Ga0373955_0014961
358 Ga0373924_0046567
359 Ga0373927_0002583
360 Ga0373927_0004622
361 Ga0373933_0000656
362 Ga0373947_0064807
363 Ga0373937_0000214
364 Ga0373937_0009034
365 Ga0373937_0028845
366 Ga0373925_0007231
367 Ga0395901_0171291
368 Ga0436365_1342341
369 Ga0439446_0020015
370 Ga0439434_0009931
371 Ga0451577_0113118
372 Ga0453683_0044813
373 Ga0453683_0083740
374 Ga0453684_0036898
375 Ga0453684_0056566
376 Ga0451576_0046009
377 Ga0495603_0064910
378 Ga0495651_0000035
379 Ga0495651_0002040
380 Ga0495651_0003344
381 Ga0495651_0005136
382 Ga0495653_0003017
383 Ga0495580_0000271
384 Ga0495580_0040596
385 Ga0495580_0055885
386 Ga0495580_0094172
387 Ga0495582_0006466
388 Ga0495582_0021921
389 Ga0495664_0064296
390 Ga0495594_0012556
391 Ga0495608_0017888
392 Ga0495608_0112795
393 Ga0495608_0138218
394 Ga0495618_0283984
395 Ga0495628_0003047
396 Ga0495628_0039555
397 Ga0495630_0001335
398 Ga0495630_0054684
399 Ga0495630_0121543
400 Ga0495666_0035218
401 Ga0495652_0002457
402 Ga0495652_0006946
403 Ga0495665_0000947
404 Ga0495586_0139435
405 Ga0495587_0008225
406 Ga0495587_0055700
407 Ga0495587_0103486
408 Ga0495645_0067040
409 Ga0495667_0007980
410 Ga0495667_0012803
411 Ga0495634_0027813
412 Ga0495657_0036526
413 Ga0495599_0026740
414 Ga0495646_0001651
415 Ga0495647_0002970
416 Ga0495658_0033417
417 Ga0495613_0068321
418 Ga0495624_0002466
419 Ga0495624_0036853
420 Ga0495581_0019077
421 Ga0495604_0004184
422 Ga0495604_0051051
423 Ga0495674_0050969
424 Ga0495674_0053585
425 Ga0495674_0057277
426 Ga0495674_0082759
427 Ga0495674_0148024
428 Ga0495674_0168784
429 Ga0495680_0002706
430 Ga0495680_0006770
431 Ga0495675_0000071
432 Ga0495675_0003191
433 Ga0495684_0026586
434 Ga0495684_0195761
435 Ga0495593_0022967
436 Ga0495602_0000380
437 Ga0495602_0065849
438 Ga0496101_0126365
439 Ga0496102_0015333
440 Ga0496102_0238042
441 Ga0496104_0280976
442 Ga0496112_0100764
443 Ga0496112_0119814
444 Ga0496114_0020137
445 Ga0496115_0005620
446 Ga0501075_0073472
447 Ga0501076_0233003
448 Ga0501076_0268420
449 Ga0501080_0355731
450 nmdc:mga06r32_11847_c1
451 nmdc:mga0n895_161898_c1
452 nmdc:mga0n895_687754_c1
453 nmdc:mga0rr50_11440_c1
454 nmdc:mga0rr50_122249_c1
455 nmdc:mga0rr50_198082_c1
456 nmdc:mga08x19_1879_c1
457 nmdc:mga08x19_788_c1
458 nmdc:mga08x19_8438_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02670

DXP_reductoisom

1-deoxy-D-xylulose 5-phosphate reductoisomerase

4

134

0.97

PF13288

DXPR_C

DXP reductoisomerase C-terminal domain

304

421

0.96

PF08436

DXP_redisom_C

1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain

195

272

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3au9-assembly1.cif.gz_A crystal structure of the quaternary complex-1 of an isomerase 0.9536 1 362
4aic-assembly1.cif.gz_A x-ray structure of 1-deoxy-d-xylulose 5-phosphate reductoisomerase, dxr, rv2870c, from mycobacterium tuberculosis, in complex with fosmidomycin, manganese and nadph 0.9465 2 362
2jcx-assembly1.cif.gz_A x-ray structure of mutant 1-deoxy-d-xylulose 5-phosphate reductoisomerase, dxr, rv2870c, from mycobacterium tuberculosis, in complex with fosmidomycin and nadph 0.9459 2 362
6mh5-assembly1.cif.gz_A crystal structure of 1-deoxy-d-xylulose-5-phosphate reductoisomerase from staphylococcus schleiferi in complex with fosmidomycin (fom) 0.9438 1 359
7s04-assembly1.cif.gz_A-2 1-deoxy-d-xylulose 5-phosphate reductoisomerase (ispc) from acinetobacter baumannii in complex with fr900098, nadph, and a magnesium ion 0.9434 1 362
ID Description Score Start End Superfamily
3a14B03 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9748 301 362 1.10.1740.10
1q0hA03 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9715 283 362 1.10.1740.10
1r0kC03 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9654 283 363 1.10.1740.10
5dulA03 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9638 283 363 1.10.1740.10
5kqoA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9634 1 130 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A3N5YD20-F1-model_v4 1-deoxy-D-xylulose-5-phosphate reductoisomerase (EC 1.1.1.267) 0.9851 104 362 GO:0016853
GO:0030145
GO:0030604
GO:0051484
GO:0070402
AF-A0A3D5ZPG8-F1-model_v4 1-deoxy-D-xylulose-5-phosphate reductoisomerase 0.9837 1 108 GO:0016853
GO:0030145
GO:0030604
GO:0051484
GO:0070402
AF-A0A535LCL2-F1-model_v4 1-deoxy-D-xylulose-5-phosphate reductoisomerase (EC 1.1.1.267) 0.9836 2 248 GO:0016853
GO:0030145
GO:0030604
GO:0051484
GO:0070402
AF-A0A3D0GWD8-F1-model_v4 1-deoxy-D-xylulose-5-phosphate reductoisomerase 0.9819 1 127 GO:0016853
GO:0030145
GO:0030604
GO:0051484
GO:0070402
AF-A0A1F5HPF2-F1-model_v4 1-deoxy-D-xylulose-5-phosphate reductoisomerase (EC 1.1.1.267) 0.9812 2 278 GO:0016853
GO:0030145
GO:0030604
GO:0051484
GO:0070402

Map