F342023

General Info

Members Datasets Scaffolds Average Seq Length
229 154 203 445

Family's Representative Sequence

Representative Sequence 3300013105|Ga0157369_10138810|Ga0157369_101388101
Length 505
Sequence MRKAGGAADASGDAFSDHYVRAWTPGGGDMTRRLPSQPPVLPGFSYVRVLGSGGFADVFLYEQNMPRRQVAVKVMLPEVATTHVRQMFQAEANLMAQLSTHPSILTVYQASVSADGRPYLVMELCSASIGQRYRSRPLPVPEVLSIGIRVASAVETAHRSGVLHRDIKPSNVLTTAYGHPVLSDFGIASTLGESELTEAAGLSVPWSAPEVLLDSTPGTVASEVWSLGATLYSLLAGRSPFEIPGKDNSPAELIGRITKARPAAIGRDDVPPRLEAILGRAMSKKPDARQHTVLELIRELQSVETELGLAQTPMEVAMDDWAIATAADPEDRTRIKGIVTVDPAGPRRRRKPQPSAAVRSSTRDSLGSFGGSGTKAPEAHARRIRSLVWSLVACSALLIALGVTAGIVLVRASSVNDIPTVHDISGRVSSGTIVFSWQDPGLLPQDSYQVRVGDSPPSVQRGTEFRVDTGSASATVPVCITVAVNRDGRTGPASAEKCVTPTGGS

Samples

Sample ID Description Type Environment
1 2643221572 Leifsonia sp. Root60 Isolate Unclassified
2 2643221616 Leifsonia sp. Root227 Isolate Unclassified
3 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
4 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
5 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
6 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
7 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
8 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
9 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
10 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
11 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
12 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
13 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
14 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
15 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
16 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
17 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
18 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
19 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
20 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
21 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
22 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
23 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
24 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
25 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
26 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
27 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
28 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
29 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
30 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
31 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
32 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
33 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
34 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
35 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
36 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
37 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
38 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
39 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
40 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
41 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
42 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
47 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
48 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
49 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
50 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
51 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
52 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
62 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
72 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
76 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
96 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
97 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
98 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
99 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
100 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
101 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
102 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
103 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
104 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
105 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
106 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
107 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
108 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
109 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
110 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
111 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
112 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
113 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
114 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
115 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
116 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
117 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
118 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
119 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
120 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
121 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
134 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
135 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
136 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
137 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
138 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
139 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
140 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
141 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
143 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
144 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
145 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
146 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
147 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
148 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
149 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
150 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
151 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
152 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
153 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
154 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.77
Metatranscriptomes 0.87
Isolates 11.35

Biome Distribution

Category Percentage (%)
Aerial Root 0.44
Bulb 0
Endosphere 20.96
Nodule 0
Rhizoplane 0.44
Rhizosphere 61.14
Stem 0
Stem Tuber 0.44
Unclassified 16.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10000983 3300002067 Bacteria 10201
2 JGI25164J39214_1000293 3300002772 Bacteria 34911
3 JGI25165J46597_1000002 3300003214 Bacteria 765387
4 Ga0006562J51391_1022888 3300003578 Bacteria 3500
5 Ga0006562J51391_1022889 3300003578 Bacteria 2830
6 Ga0055539_1000008 3300003752 Bacteria 537665
7 Ga0055533_1000001 3300003756 Bacteria 1863437
8 Ga0055525_1000413 3300003759 Bacteria 26038
9 Ga0055527_1000001 3300003760 Bacteria 850044
10 Ga0055529_1000018 3300003763 Bacteria 344344
11 Ga0070658_10000135 3300005327 Bacteria 64641
12 Ga0070658_10002678 3300005327 Bacteria 14814
13 Ga0070658_10036478 3300005327 Bacteria 3963
14 Ga0070658_10097696 3300005327 Bacteria 2425
15 Ga0070660_100013857 3300005339 Bacteria 5799
16 Ga0070660_100065322 3300005339 Bacteria 2832
17 Ga0070671_100088185 3300005355 Bacteria 2596
18 Ga0070659_100000707 3300005366 Bacteria 24276
19 Ga0070659_100029274 3300005366 Bacteria 4256
20 Ga0070667_100007694 3300005367 Bacteria 8934
21 Ga0068855_100003831 3300005563 Bacteria 18392
22 Ga0068855_100031107 3300005563 Bacteria 6376
23 Ga0068855_100041294 3300005563 Bacteria 5468
24 Ga0068855_100049344 3300005563 Bacteria 4964
25 Ga0068857_100013295 3300005577 Bacteria 7170
26 Ga0068856_100110258 3300005614 Bacteria 2749
27 Ga0068852_100011303 3300005616 Bacteria 6715
28 Ga0068852_100188891 3300005616 Bacteria 1942
29 Ga0068859_100188391 3300005617 Bacteria 2147
30 Ga0068864_100014882 3300005618 Bacteria 6463
31 Ga0068851_10000005 3300005834 Bacteria 262808
32 Ga0068863_100034601 3300005841 Bacteria 4811
33 Ga0068858_100000058 3300005842 Bacteria 117238
34 Ga0075365_10125298 3300006038 Bacteria 1775
35 Ga0075364_10002435 3300006051 Bacteria 10419
36 Ga0075369_10001856 3300006186 Bacteria 7372
37 Ga0097620_100188396 3300006931 Bacteria 2147
38 Ga0105240_10000915 3300009093 Bacteria 52622
39 Ga0105240_10019844 3300009093 Bacteria 8978
40 Ga0105245_10005642 3300009098 Bacteria 10995
41 Ga0105245_10013859 3300009098 Bacteria 7024
42 Ga0105241_10001379 3300009174 Bacteria 18537
43 Ga0105248_10001580 3300009177 Bacteria 25348
44 Ga0105248_10036301 3300009177 Bacteria 5512
45 Ga0105237_10082828 3300009545 Bacteria 3199
46 Ga0105238_10004106 3300009551 Bacteria 14445
47 Ga0105239_10100234 3300010375 Bacteria 3204
48 Ga0157371_10000615 3300013102 Bacteria 42407
49 Ga0157370_10001886 3300013104 Bacteria 25812
50 Ga0157370_10160179 3300013104 Bacteria 2094
51 Ga0157369_10138810 3300013105 Bacteria 2573
52 Ga0163163_10057955 3300014325 Bacteria 3830
53 Ga0157379_10043234 3300014968 Bacteria 4022
54 Ga0209566_100026 3300025225 Bacteria 367457
55 Ga0209674_100001 3300025226 Bacteria 4013750
56 Ga0209672_100006 3300025228 Bacteria 1004497
57 Ga0209147_101369 3300025229 Bacteria 9087
58 Ga0209563_100001 3300025230 Bacteria 4013775
59 Ga0207427_100099 3300025231 Bacteria 121767
60 Ga0209258_102464 3300025242 Bacteria 4753
61 Ga0209677_100001 3300025253 Bacteria 4013787
62 Ga0209677_100883 3300025253 Bacteria 14726
63 Ga0209148_1000015 3300025254 Bacteria 850103
64 Ga0209148_1001916 3300025254 Bacteria 8511
65 Ga0209233_1000001 3300025261 Bacteria 2992747
66 Ga0209455_1000013 3300025272 Bacteria 850103
67 Ga0209455_1000978 3300025272 Bacteria 14455
68 Ga0207656_10000001 3300025321 Bacteria 1323684
69 Ga0207656_10000003 3300025321 Bacteria 771644
70 Ga0207656_10000004 3300025321 Bacteria 632320
71 Ga0207705_10000001 3300025909 Bacteria 2061880
72 Ga0207705_10026694 3300025909 Bacteria 4116
73 Ga0207705_10061103 3300025909 Bacteria 2722
74 Ga0207654_10000003 3300025911 Bacteria 1030378
75 Ga0207695_10002765 3300025913 Bacteria 25563
76 Ga0207695_10009352 3300025913 Bacteria 12118
77 Ga0207671_10000001 3300025914 Bacteria 1318881
78 Ga0207671_10046804 3300025914 Bacteria 3200
79 Ga0207657_10026770 3300025919 Bacteria 5292
80 Ga0207694_10000066 3300025924 Bacteria 128281
81 Ga0207690_10001389 3300025932 Bacteria 15210
82 Ga0207690_10033322 3300025932 Bacteria 3312
83 Ga0207711_10009202 3300025941 Bacteria 8252
84 Ga0207711_10034607 3300025941 Bacteria 4279
85 Ga0207667_10002542 3300025949 Bacteria 22693
86 Ga0207667_10012867 3300025949 Bacteria 9614
87 Ga0207667_10022832 3300025949 Bacteria 6900
88 Ga0207640_10019143 3300025981 Bacteria 4039
89 Ga0207658_10038945 3300025986 Bacteria 3428
90 Ga0207703_10000026 3300026035 Bacteria 211591
91 Ga0207678_10040121 3300026067 Bacteria 4061
92 Ga0207702_10240696 3300026078 Bacteria 1695
93 Ga0207676_10017475 3300026095 Bacteria 5199
94 Ga0207674_10002235 3300026116 Bacteria 24509
95 Ga0207698_10008410 3300026142 Bacteria 6526
96 Ga0307515_10062926 3300028794 Bacteria 5227
97 Ga0307515_10191973 3300028794 Bacteria 1949
98 Ga0307514_10021338 3300031649 Bacteria 5279
99 Ga0395899_0010048 3300037312 Bacteria 7254
100 Ga0395898_0000131 3300037466 Bacteria 192369
101 Ga0395898_0318129 3300037466 Bacteria 1485
102 Ga0466972_0025845 3300044658 Bacteria 2909
103 Ga0466965_0000033 3300044683 Bacteria 52298
104 Ga0466965_0028502 3300044683 Bacteria 2713
105 Ga0466966_0012587 3300044684 Bacteria 5606
106 Ga0466961_0013996 3300044693 Bacteria 5142
107 Ga0466971_0005029 3300044719 Bacteria 5724
108 Ga0466968_0015985 3300044735 Bacteria 2982
109 Ga0466970_0004819 3300044765 Bacteria 6665
110 Ga0466970_0006614 3300044765 Bacteria 5798
111 Ga0466970_0015806 3300044765 Bacteria 3885
112 Ga0495590_0000103 3300046457 Bacteria 50735
113 Ga0495650_0004370 3300046471 Bacteria 9734
114 Ga0495656_0048362 3300046615 Bacteria 1807
115 Ga0495672_0004883 3300047320 Bacteria 10782
116 Ga0495672_0038516 3300047320 Bacteria 2916
117 Ga0496113_0024981 3300048916 Bacteria 4255
118 Ga0496117_0004457 3300048920 Bacteria 15436
119 Ga0496117_0018259 3300048920 Bacteria 5820
120 Ga0496117_0058548 3300048920 Bacteria 2667
121 Ga0496118_0000089 3300048921 Bacteria 175942
122 Ga0496119_0004125 3300048922 Bacteria 14629
123 Ga0496119_0008136 3300048922 Bacteria 9282
124 Ga0496119_0124979 3300048922 Bacteria 1409
125 Ga0496120_0000856 3300048923 Bacteria 43060
126 Ga0496120_0007450 3300048923 Bacteria 8135
127 Ga0496120_0007562 3300048923 Bacteria 8061
128 Ga0496120_0032897 3300048923 Bacteria 3121
129 Ga0496120_0051426 3300048923 Bacteria 2353
130 Ga0496121_0000040 3300048924 Bacteria 348494
131 Ga0496121_0141519 3300048924 Bacteria 1784
132 Ga0496122_0006278 3300048925 Bacteria 13718
133 Ga0496122_0025271 3300048925 Bacteria 5163
134 Ga0496122_0117162 3300048925 Bacteria 1730
135 Ga0496123_0004998 3300048926 Bacteria 13575
136 Ga0496124_0000037 3300048927 Bacteria 317430
137 Ga0496124_0004867 3300048927 Bacteria 15444
138 Ga0496124_0052250 3300048927 Bacteria 3472
139 Ga0496125_0080814 3300048928 Bacteria 2486
140 Ga0496126_0001700 3300048929 Bacteria 32705
141 Ga0501031_0017445 3300049568 Bacteria 4666
142 Ga0501032_0001466 3300049569 Bacteria 18777
143 Ga0501032_0006303 3300049569 Bacteria 8738
144 Ga0501032_0011893 3300049569 Bacteria 6234
145 Ga0501032_0026445 3300049569 Bacteria 3991
146 Ga0501033_0001744 3300049570 Bacteria 19008
147 Ga0501033_0064104 3300049570 Bacteria 2704
148 Ga0501034_0004864 3300049571 Bacteria 14818
149 Ga0501034_0005418 3300049571 Bacteria 13950
150 Ga0501034_0006257 3300049571 Bacteria 12810
151 Ga0501034_0007674 3300049571 Bacteria 11480
152 Ga0501034_0038399 3300049571 Bacteria 4848
153 Ga0501036_0003159 3300049572 Bacteria 13142
154 Ga0501037_0002078 3300049573 Bacteria 14510
155 Ga0501037_0035397 3300049573 Bacteria 3682
156 Ga0501038_0003823 3300049574 Bacteria 14002
157 Ga0501038_0045364 3300049574 Bacteria 3816
158 Ga0501038_0066423 3300049574 Bacteria 3071
159 Ga0501039_0011141 3300049575 Bacteria 6853
160 Ga0501043_0004560 3300049579 Bacteria 11254
161 Ga0501043_0013138 3300049579 Bacteria 6475
162 Ga0501046_0002439 3300049580 Bacteria 17428
163 Ga0501047_0004862 3300049581 Bacteria 12622
164 Ga0501047_0020869 3300049581 Bacteria 6293
165 Ga0501047_0258138 3300049581 Bacteria 1590
166 Ga0501048_0006919 3300049582 Bacteria 8620
167 Ga0501067_0044713 3300049583 Bacteria 2460
168 Ga0501069_0006921 3300049585 Bacteria 5928
169 Ga0501070_0002706 3300049586 Bacteria 15477
170 Ga0501070_0003766 3300049586 Bacteria 13100
171 Ga0501071_0000717 3300049587 Bacteria 17435
172 Ga0501072_0005014 3300049588 Bacteria 10069
173 Ga0501073_0030218 3300049589 Bacteria 3869
174 Ga0501080_0000062 3300049742 Bacteria 70507
175 Ga0501080_0064265 3300049742 Bacteria 3414
176 Ga0501083_0012384 3300049744 Bacteria 5968
177 Ga0501035_0010391 3300049822 Bacteria 8631
178 Ga0501035_0011315 3300049822 Bacteria 8270
179 Ga0501044_0002293 3300049823 Bacteria 21797
180 nmdc:mga0yw44_12041_c1 3300050492 Bacteria 4493
181 nmdc:mga0yw44_27166_c1 3300050492 Bacteria 1906
182 nmdc:mga0sz30_3578_c1 3300050516 Bacteria 5601
183 Ga0500635_0000015 3300053080 Bacteria 125195
184 Ga0500643_000404 3300053087 Bacteria 33004
185 Ga0500651_0000734 3300053093 Bacteria 16052
186 Ga0500556_0000007 3300053104 Bacteria 331400
187 Ga0500556_0000268 3300053104 Bacteria 41084
188 Ga0500655_003562 3300053133 Bacteria 2808
189 Ga0500559_0000074 3300053136 Bacteria 78568
190 Ga0500559_0000384 3300053136 Bacteria 32348
191 Ga0500559_0000661 3300053136 Bacteria 23107
192 Ga0500568_0000021 3300053139 Bacteria 185406
193 Ga0500568_0000098 3300053139 Bacteria 80393
194 Ga0500568_0000818 3300053139 Bacteria 21861
195 Ga0500568_0016374 3300053139 Bacteria 3298
196 Ga0500573_0000007 3300053140 Bacteria 272970
197 Ga0500573_0002743 3300053140 Bacteria 8910
198 Ga0500573_0009911 3300053140 Bacteria 5305
199 Ga0500573_0018925 3300053140 Bacteria 3935
200 Ga0500573_0033862 3300053140 Bacteria 2947
201 Ga0500573_0046315 3300053140 Bacteria 2506
202 Ga0500616_0001058 3300053153 Bacteria 29022
203 Ga0500620_000038 3300053155 Bacteria 24922

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048922 Ga0496119_0124979 Ga0496119_0124979_152_1393 371
2 3300048924 Ga0496121_0141519 Ga0496121_0141519_355_1737 388
3 3300048925 Ga0496122_0006278 Ga0496122_0006278_2790_4154 391
4 3300048926 Ga0496123_0004998 Ga0496123_0004998_8245_9609 391
5 3300037466 Ga0395898_0000131 Ga0395898_0000131_56050_57423 394
6 3300048923 Ga0496120_0032897 Ga0496120_0032897_799_2172 394
7 3300050492 nmdc:mga0yw44_27166_c1 nmdc:mga0yw44_27166_c1_593_1891 394
8 3300009174 Ga0105241_10001379 Ga0105241_100013793 399
9 3300046471 Ga0495650_0004370 Ga0495650_0004370_1419_2822 399
10 3300048929 Ga0496126_0001700 Ga0496126_0001700_8421_9833 399
11 3300053140 Ga0500573_0002743 Ga0500573_0002743_514_1965 402
12 3300009098 Ga0105245_10005642 Ga0105245_100056422 407
13 3300010375 Ga0105239_10100234 Ga0105239_101002342 407
14 3300053087 Ga0500643_000404 Ga0500643_000404_13043_14413 407
15 3300049586 Ga0501070_0003766 Ga0501070_0003766_4528_5946 408
16 3300048924 Ga0496121_0000040 Ga0496121_0000040_313555_314928 412
17 3300049569 Ga0501032_0001466 Ga0501032_0001466_164_1540 412
18 3300049571 Ga0501034_0005418 Ga0501034_0005418_11718_13094 412
19 3300049573 Ga0501037_0002078 Ga0501037_0002078_562_1938 412
20 3300049574 Ga0501038_0003823 Ga0501038_0003823_302_1678 412
21 3300049575 Ga0501039_0011141 Ga0501039_0011141_762_2138 412
22 3300049579 Ga0501043_0013138 Ga0501043_0013138_4787_6163 412
23 3300049580 Ga0501046_0002439 Ga0501046_0002439_4520_5896 412
24 3300049581 Ga0501047_0258138 Ga0501047_0258138_179_1555 412
25 3300049582 Ga0501048_0006919 Ga0501048_0006919_5520_6896 412
26 3300049586 Ga0501070_0002706 Ga0501070_0002706_8893_10269 412
27 3300049822 Ga0501035_0010391 Ga0501035_0010391_2142_3518 412
28 3300053104 Ga0500556_0000007 Ga0500556_0000007_277905_279278 412
29 3300053139 Ga0500568_0000021 Ga0500568_0000021_131893_133266 412
30 3300049581 Ga0501047_0004862 Ga0501047_0004862_2732_4159 413
31 3300049822 Ga0501035_0011315 Ga0501035_0011315_4673_6100 413
32 3300049823 Ga0501044_0002293 Ga0501044_0002293_13466_14893 413
33 3300005327 Ga0070658_10097696 Ga0070658_100976962 414
34 3300005614 Ga0068856_100110258 Ga0068856_1001102582 414
35 3300013104 Ga0157370_10160179 Ga0157370_101601792 414
36 3300025253 Ga0209677_100883 Ga0209677_1008835 414
37 3300037466 Ga0395898_0318129 Ga0395898_0318129_25_1452 414
38 3300044765 Ga0466970_0004819 Ga0466970_0004819_3942_5354 415
39 3300048923 Ga0496120_0007562 Ga0496120_0007562_4439_5812 415
40 3300053140 Ga0500573_0046315 Ga0500573_0046315_237_1676 415
41 3300053153 Ga0500616_0001058 Ga0500616_0001058_15646_17046 415
42 3300048923 Ga0496120_0007450 Ga0496120_0007450_4898_6271 416
43 3300048927 Ga0496124_0004867 Ga0496124_0004867_10698_12116 416
44 3300049571 Ga0501034_0007674 Ga0501034_0007674_1160_2554 416
45 3300049579 Ga0501043_0004560 Ga0501043_0004560_3214_4608 416
46 3300049581 Ga0501047_0020869 Ga0501047_0020869_1748_3142 416
47 3300049585 Ga0501069_0006921 Ga0501069_0006921_3090_4484 416
48 3300049589 Ga0501073_0030218 Ga0501073_0030218_197_1591 416
49 3300049742 Ga0501080_0000062 Ga0501080_0000062_18194_19588 416
50 3300049744 Ga0501083_0012384 Ga0501083_0012384_1658_3052 416
51 3300050516 nmdc:mga0sz30_3578_c1 nmdc:mga0sz30_3578_c1_102_1499 416
52 3300053140 Ga0500573_0018925 Ga0500573_0018925_824_2257 416
53 3300044765 Ga0466970_0006614 Ga0466970_0006614_2168_3622 417
54 3300049583 Ga0501067_0044713 Ga0501067_0044713_895_2277 417
55 3300049588 Ga0501072_0005014 Ga0501072_0005014_5047_6429 417
56 3300048922 Ga0496119_0004125 Ga0496119_0004125_9158_10537 418
57 3300048923 Ga0496120_0000856 Ga0496120_0000856_4622_6001 418
58 3300049571 Ga0501034_0004864 Ga0501034_0004864_11752_13134 418
59 3300053136 Ga0500559_0000074 Ga0500559_0000074_32578_33948 418
60 3300053139 Ga0500568_0016374 Ga0500568_0016374_124_1524 418
61 3300002772 JGI25164J39214_1000293 JGI25164J39214_10002934 419
62 3300003214 JGI25165J46597_1000002 JGI25165J46597_100000239 419
63 3300003760 Ga0055527_1000001 Ga0055527_1000001269 419
64 3300003763 Ga0055529_1000018 Ga0055529_1000018227 419
65 3300025228 Ga0209672_100006 Ga0209672_100006707 419
66 3300025229 Ga0209147_101369 Ga0209147_1013692 419
67 3300025231 Ga0207427_100099 Ga0207427_10009982 419
68 3300025242 Ga0209258_102464 Ga0209258_1024642 419
69 3300025254 Ga0209148_1000015 Ga0209148_1000015551 419
70 3300025261 Ga0209233_1000001 Ga0209233_10000012766 419
71 3300025272 Ga0209455_1000013 Ga0209455_1000013551 419
72 iso_pu_bacteria 2884763398 2884764746 419
73 3300046615 Ga0495656_0048362 Ga0495656_0048362_53_1429 420
74 3300048920 Ga0496117_0004457 Ga0496117_0004457_8972_10384 420
75 3300048921 Ga0496118_0000089 Ga0496118_0000089_50723_52135 420
76 3300048922 Ga0496119_0008136 Ga0496119_0008136_2123_3535 420
77 3300048923 Ga0496120_0051426 Ga0496120_0051426_719_2131 420
78 3300048925 Ga0496122_0025271 Ga0496122_0025271_202_1614 420
79 3300048927 Ga0496124_0000037 Ga0496124_0000037_139979_141391 420
80 3300048927 Ga0496124_0052250 Ga0496124_0052250_1646_3058 420
81 3300049569 Ga0501032_0026445 Ga0501032_0026445_711_2105 420
82 3300049570 Ga0501033_0064104 Ga0501033_0064104_836_2230 420
83 3300049574 Ga0501038_0045364 Ga0501038_0045364_2165_3559 420
84 3300044683 Ga0466965_0000033 Ga0466965_0000033_2693_4084 421
85 3300048928 Ga0496125_0080814 Ga0496125_0080814_962_2425 421
86 3300005563 Ga0068855_100003831 Ga0068855_1000038318 422
87 3300025949 Ga0207667_10002542 Ga0207667_100025424 422
88 3300053140 Ga0500573_0033862 Ga0500573_0033862_1267_2664 422
89 3300009093 Ga0105240_10019844 Ga0105240_100198445 423
90 3300025913 Ga0207695_10002765 Ga0207695_100027654 423
91 3300025981 Ga0207640_10019143 Ga0207640_100191432 423
92 3300049570 Ga0501033_0001744 Ga0501033_0001744_15779_17194 423
93 3300053136 Ga0500559_0000661 Ga0500559_0000661_4755_6155 423
94 3300005327 Ga0070658_10002678 Ga0070658_100026789 424
95 3300005339 Ga0070660_100013857 Ga0070660_1000138576 424
96 3300005366 Ga0070659_100000707 Ga0070659_1000007076 424
97 3300005367 Ga0070667_100007694 Ga0070667_1000076946 424
98 3300005563 Ga0068855_100041294 Ga0068855_1000412944 424
99 3300005563 Ga0068855_100049344 Ga0068855_1000493442 424
100 3300005617 Ga0068859_100188391 Ga0068859_1001883912 424
101 3300005842 Ga0068858_100000058 Ga0068858_10000005863 424
102 3300006931 Ga0097620_100188396 Ga0097620_1001883962 424
103 3300013102 Ga0157371_10000615 Ga0157371_1000061525 424
104 3300013104 Ga0157370_10001886 Ga0157370_100018866 424
105 3300014968 Ga0157379_10043234 Ga0157379_100432344 424
106 3300025919 Ga0207657_10026770 Ga0207657_100267704 424
107 3300025932 Ga0207690_10001389 Ga0207690_100013892 424
108 3300025949 Ga0207667_10012867 Ga0207667_100128672 424
109 3300025986 Ga0207658_10038945 Ga0207658_100389453 424
110 3300026035 Ga0207703_10000026 Ga0207703_1000002627 424
111 3300026078 Ga0207702_10240696 Ga0207702_102406961 424
112 3300046457 Ga0495590_0000103 Ga0495590_0000103_531_1934 424
113 3300047320 Ga0495672_0038516 Ga0495672_0038516_221_1624 424
114 3300048920 Ga0496117_0058548 Ga0496117_0058548_940_2367 424
115 3300048925 Ga0496122_0117162 Ga0496122_0117162_249_1661 424
116 3300053140 Ga0500573_0000007 Ga0500573_0000007_74551_76002 424
117 3300053136 Ga0500559_0000384 Ga0500559_0000384_18196_19614 425
118 3300053155 Ga0500620_000038 Ga0500620_000038_13843_15240 425
119 3300006186 Ga0075369_10001856 Ga0075369_100018562 426
120 3300050492 nmdc:mga0yw44_12041_c1 nmdc:mga0yw44_12041_c1_2971_4371 426
121 3300053104 Ga0500556_0000268 Ga0500556_0000268_12628_14025 426
122 3300053133 Ga0500655_003562 Ga0500655_003562_754_2151 426
123 3300009093 Ga0105240_10000915 Ga0105240_1000091514 427
124 3300025254 Ga0209148_1001916 Ga0209148_10019164 427
125 3300025911 Ga0207654_10000003 Ga0207654_10000003519 427
126 3300025913 Ga0207695_10009352 Ga0207695_100093524 427
127 3300049568 Ga0501031_0017445 Ga0501031_0017445_1940_3355 427
128 3300049742 Ga0501080_0064265 Ga0501080_0064265_610_2010 427
129 3300028794 Ga0307515_10062926 Ga0307515_100629263 428
130 3300049569 Ga0501032_0006303 Ga0501032_0006303_3834_5246 428
131 3300049569 Ga0501032_0011893 Ga0501032_0011893_2479_3894 428
132 3300049572 Ga0501036_0003159 Ga0501036_0003159_409_1824 428
133 3300049573 Ga0501037_0035397 Ga0501037_0035397_2049_3464 428
134 3300049574 Ga0501038_0066423 Ga0501038_0066423_1479_2891 428
135 iso_pu_bacteria 2751185788 2753302266 428
136 iso_pu_bacteria 2904430863 2904432765 428
137 iso_pu_bacteria 2904501621 2904503210 428
138 iso_pu_bacteria 2908674828 2908675613 428
139 iso_pu_bacteria 2909074476 2909074660 428
140 iso_pu_bacteria 2919039151 2919040878 428
141 iso_pu_bacteria 2919042368 2919043950 428
142 iso_pu_bacteria 2928104781 2928105219 428
143 iso_pu_bacteria 2928500415 2928500597 428
144 iso_pu_bacteria 2984551494 2984554406 428
145 3300049571 Ga0501034_0006257 Ga0501034_0006257_8926_10320 429
146 3300053139 Ga0500568_0000818 Ga0500568_0000818_13368_14789 429
147 iso_pu_bacteria 2964326757 2964329169 429
148 3300005339 Ga0070660_100065322 Ga0070660_1000653221 430
149 3300005366 Ga0070659_100029274 Ga0070659_1000292742 430
150 3300009177 Ga0105248_10001580 Ga0105248_1000158013 430
151 3300009545 Ga0105237_10082828 Ga0105237_100828283 430
152 3300025914 Ga0207671_10046804 Ga0207671_100468042 430
153 3300025932 Ga0207690_10033322 Ga0207690_100333222 430
154 3300025941 Ga0207711_10009202 Ga0207711_100092028 430
155 3300044735 Ga0466968_0015985 Ga0466968_0015985_980_2392 432
156 iso_pu_bacteria 2966924647 2966925125 432
157 3300047320 Ga0495672_0004883 Ga0495672_0004883_1707_3167 433
158 3300053140 Ga0500573_0009911 Ga0500573_0009911_3638_5059 433
159 iso_pu_bacteria 2852643534 2852645089 433
160 3300003752 Ga0055539_1000008 Ga0055539_1000008448 434
161 3300003756 Ga0055533_1000001 Ga0055533_1000001622 434
162 3300003759 Ga0055525_1000413 Ga0055525_100041311 434
163 3300005327 Ga0070658_10000135 Ga0070658_1000013528 434
164 3300005563 Ga0068855_100031107 Ga0068855_1000311075 434
165 3300025225 Ga0209566_100026 Ga0209566_100026101 434
166 3300025226 Ga0209674_100001 Ga0209674_100001623 434
167 3300025230 Ga0209563_100001 Ga0209563_100001623 434
168 3300025253 Ga0209677_100001 Ga0209677_100001623 434
169 3300025909 Ga0207705_10000001 Ga0207705_100000011865 434
170 3300025949 Ga0207667_10022832 Ga0207667_100228322 434
171 3300026067 Ga0207678_10040121 Ga0207678_100401212 434
172 3300028794 Ga0307515_10191973 Ga0307515_101919732 434
173 3300053139 Ga0500568_0000098 Ga0500568_0000098_71333_72760 434
174 iso_pu_bacteria 2939657138 2939657474 434
175 iso_pu_bacteria 2857733635 2857736870 435
176 iso_pu_bacteria 2857737099 2857740097 435
177 iso_pu_bacteria 2870622029 2870623070 435
178 3300006038 Ga0075365_10125298 Ga0075365_101252982 436
179 3300044765 Ga0466970_0015806 Ga0466970_0015806_440_1867 436
180 3300005577 Ga0068857_100013295 Ga0068857_1000132952 437
181 3300005616 Ga0068852_100011303 Ga0068852_1000113034 437
182 3300005616 Ga0068852_100188891 Ga0068852_1001888912 437
183 3300005834 Ga0068851_10000005 Ga0068851_10000005101 437
184 3300009098 Ga0105245_10013859 Ga0105245_100138593 437
185 3300009177 Ga0105248_10036301 Ga0105248_100363012 437
186 3300009551 Ga0105238_10004106 Ga0105238_100041064 437
187 3300025321 Ga0207656_10000001 Ga0207656_10000001200 437
188 3300025321 Ga0207656_10000003 Ga0207656_10000003306 437
189 3300025321 Ga0207656_10000004 Ga0207656_10000004163 437
190 3300025914 Ga0207671_10000001 Ga0207671_10000001198 437
191 3300025924 Ga0207694_10000066 Ga0207694_10000066116 437
192 3300025941 Ga0207711_10034607 Ga0207711_100346075 437
193 3300026116 Ga0207674_10002235 Ga0207674_1000223515 437
194 3300026142 Ga0207698_10008410 Ga0207698_100084102 437
195 3300031649 Ga0307514_10021338 Ga0307514_100213385 437
196 3300044683 Ga0466965_0028502 Ga0466965_0028502_1054_2478 437
197 3300044684 Ga0466966_0012587 Ga0466966_0012587_996_2420 437
198 3300044693 Ga0466961_0013996 Ga0466961_0013996_2945_4369 437
199 3300044719 Ga0466971_0005029 Ga0466971_0005029_2271_3695 437
200 iso_pu_bacteria 2643221572 2643874756 437
201 iso_pu_bacteria 2643221669 2644381812 437
202 iso_pu_bacteria 2895660088 2895662867 437
203 3300025909 Ga0207705_10026694 Ga0207705_100266942 438
204 3300044658 Ga0466972_0025845 Ga0466972_0025845_1406_2833 438
205 iso_pu_bacteria 2643221616 2644095373 438
206 iso_pu_bacteria 2643221632 2644184031 438
207 iso_pu_bacteria 2844841374 2844842290 438
208 iso_pu_bacteria 2919055335 2919057937 438
209 iso_pu_bacteria 2919523602 2919524333 438
210 3300005327 Ga0070658_10036478 Ga0070658_100364782 439
211 3300005355 Ga0070671_100088185 Ga0070671_1000881851 439
212 3300005618 Ga0068864_100014882 Ga0068864_1000148826 439
213 3300005841 Ga0068863_100034601 Ga0068863_1000346012 439
214 3300006051 Ga0075364_10002435 Ga0075364_100024355 439
215 3300014325 Ga0163163_10057955 Ga0163163_100579552 439
216 3300025909 Ga0207705_10061103 Ga0207705_100611032 439
217 3300026095 Ga0207676_10017475 Ga0207676_100174752 439
218 3300049571 Ga0501034_0038399 Ga0501034_0038399_3281_4708 439
219 3300049587 Ga0501071_0000717 Ga0501071_0000717_1975_3402 439
220 3300053093 Ga0500651_0000734 Ga0500651_0000734_2270_3700 439
221 3300013105 Ga0157369_10138810 Ga0157369_101388101 440
222 3300053080 Ga0500635_0000015 Ga0500635_0000015_103334_104758 440
223 3300037312 Ga0395899_0010048 Ga0395899_0010048_3947_5374 441
224 3300048916 Ga0496113_0024981 Ga0496113_0024981_321_1772 441
225 3300002067 JGI24735J21928_10000983 JGI24735J21928_100009831 442
226 3300003578 Ga0006562J51391_1022888 Ga0006562J51391_10228883 442
227 3300003578 Ga0006562J51391_1022889 Ga0006562J51391_10228892 442
228 3300025272 Ga0209455_1000978 Ga0209455_10009784 442
229 3300048920 Ga0496117_0018259 Ga0496117_0018259_2308_3759 442

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07714

PK_Tyr_Ser-Thr

Protein tyrosine and serine/threonine kinase

44

300

0.86

PF00069

Pkinase

Protein kinase domain

44

303

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
2fum-assembly3.cif.gz_C catalytic domain of protein kinase pknb from mycobacterium tuberculosis in complex with mitoxantrone 0.8669 8 275
6s73-assembly3.cif.gz_C crystal structure of nek7 srs mutant bound to compound 51 0.861 10 276
2fum-assembly3.cif.gz_C catalytic domain of protein kinase pknb from mycobacterium tuberculosis in complex with mitoxantrone 0.8606 8 275
6s73-assembly2.cif.gz_B crystal structure of nek7 srs mutant bound to compound 51 0.8537 10 276
6s75-assembly1.cif.gz_A crystal structure of nek7 bound to compound 51 0.853 10 276
ID Description Score Start End Superfamily
af_Q23260_25_123_3.30.200.20 Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1;Phosphorylase Kinase; domain 1 0.9308 14 95 3.30.200.20
af_F1R221_429_547_3.30.200.20 Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1;Phosphorylase Kinase; domain 1 0.9202 15 97 3.30.200.20
af_P9WI63_8_98_3.30.200.20 Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1;Phosphorylase Kinase; domain 1 0.9101 15 95 3.30.200.20
af_P9WI65_17_105_3.30.200.20 Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1;Phosphorylase Kinase; domain 1 0.9099 14 93 3.30.200.20
6d1yA01 Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1;Phosphorylase Kinase; domain 1 0.8995 14 95 3.30.200.20
ID Description Score Start End GO Terms
AF-A0A2V7H3X6-F1-model_v4 Protein kinase domain-containing protein 0.8998 13 151 GO:0004676
GO:0004677
GO:0004679
GO:0004711
GO:0005524
GO:0035175
GO:0035402
GO:0035403
GO:0035979
GO:0044022
GO:0044023
GO:0044024
GO:0044025
GO:0072354
GO:0072371
GO:0072518
GO:0140823
GO:0140855
GO:0140857
GO:1990244
AF-A0A7W0LHE8-F1-model_v4 Serine/threonine protein kinase 0.8881 11 120 GO:0004674
GO:0005524
AF-A0A2E1RTY5-F1-model_v4 Protein kinase domain-containing protein 0.8811 11 98
AF-A0A800A8U1-F1-model_v4 non-specific serine/threonine protein kinase (EC 2.7.11.1) 0.8807 7 159 GO:0004674
GO:0005524
AF-A0A5C7WCB7-F1-model_v4 non-specific serine/threonine protein kinase (EC 2.7.11.1) 0.8799 5 147 GO:0004676
GO:0004677
GO:0004679
GO:0004711
GO:0005524
GO:0035175
GO:0035402
GO:0035403
GO:0035979
GO:0044022
GO:0044023
GO:0044024
GO:0044025
GO:0072354
GO:0072371
GO:0072518
GO:0080090
GO:0140823
GO:0140855
GO:0140857
GO:1990244

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pLDDT pTM Quality
73.84 0.59 Medium
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