F341752

General Info

Members Datasets Scaffolds Average Seq Length
229 155 458 1461

Family's Representative Sequence

Representative Sequence 3300005436|Ga0070713_100001095|Ga0070713_1000010956
Length 1632
Sequence MQSLPSSLMWAHPLVAEWFVAKFGTPTEPQEQGWPHILAGRTTLISAPTGSGKTLAAFLACIDQLVRKALAGNLTDRTEVLYVSPLKALGNDIQKNLEQPLGEIQALAGERGLLMPEIRTAVRTGDTLMQERRAMLKRPPHILVTTPESLYILLTASKSRAILRDVETVIVDEIHAVADDKRGAHLTLSLERLDALCHRRPMRIGLSATQKPIEEVARFLTGNPRASDGPAVASNHFAELTAETNTSLSRYESGADNAVASEAAHSATSQRRDPLSLFSDPVIVNVGHKRKLDLGIEVPPMPLGPVASNELWDAVYDRLVALVAEHRSTLVFVNTRRMAERLCHELGARIGEENVAAHHGSLSRKLRLAAEKKLKEGQVRVLVATASLELGIDVGTVDLAVQINSPRSIAVALQRVGRSGHWRGAVPKGRFFATTRDDLVECAALVRAIRQGDLDRLIIPDAPLDVLAQQIVATCASASNDVAQSPRPPVSKNDAAGEGVGVEPDRAYPQAEIEVALANSRAGTPAPHEEGWGEDEIFALVRRAYPYRDLKRETFNSILEMLSDGIASKRGRYGAYLHRDRVNGKLRARRGARLAAITSGGAIPDNSLYTVVAEPDGVVVGTVDEDFAVESNRGDIMLLGNTSWMIHRIETNAGRMLVQDAHGAPPSVPFWRGEAPARTEELSAHVGELREKMSALLPRTSPVGFSATQPEVAEAVQWLKAACGLDDSGAEQMIEYVVQGRAVLGAVPTQTTVIAERFFDEGGGMQLVIHAPFGGRINKAWGMSLKKRFCVGFNFELQAAATDNGLNIALAEQHSFPLGDVFRFLQAETVQPILEQAALDSPIFATRWRWDANRALALLRFQNGKKVPPQIQRIRSEDLLASVFPDAAACFENIEGERKIPDHPLVGEVMKDVLTEAMDVEGLKSLLQGMASGKIRVIAVDTPVPSQFSHEILNANPYAYLDDAPLEERRARAVNMRRMLPEAVLQEVGGLDPGAIAQVREEAWPDVRDADELHDVLHTLVALPEGFDNISIPAAEDAARMGHPSHTVFNAGILEVFGEGGSAVPGRPFEGGSSPINHRRARWSRYFERLVEEGRAGVAVAADDFSGQAIGRRYWVAAERARTFAAVFPSAVFEQRLADVEPGTISRDDALLTLVTGWMAHLGPATASDLGAGLGLAASDVEKALLRMEAGGTVLRGSFTGSGSRPPSQQSTVELRSTEQPRTAIPTEAEAVTPGGGTAGPEVEWCERRLLARIHRLTVGMLRKQIEPVTAAAFLRWLMRWQHVAPGTQVTRERGTLEVLQQLQGFEIPANAWERQILSRRIADYDPQWLDQLCMTGAVGWGRLSPHPATIDTGGNGTGKGASPDEASPRQRRVVPTSVAPITFFIREEADWMSPRHSAGAEAETRGISEGARLVLEFLRQRGASFFTDIVRATGKLKAEVETGLWELVAAGLVTADGFDNLRALIDPKRRAGSGSGRSVRPRHSSGRWALLHADGAAERNRTVEAACWMLLRRYGIVIRDLLVREANLPPWRELLMAFRRLEDRGEIRGGRFVDGFLGEQFALPVAVESVRGMRGTPLSGEMMTLSAADPLNLVGILVPGERVPAISGRTVTYRDGIAVSGAESNAAAAAS

Samples

Sample ID Description Type Environment
1 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
25 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
28 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
29 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
42 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
46 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
47 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
48 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
49 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
50 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
77 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
78 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
79 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
80 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
81 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
82 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
83 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
84 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
85 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
86 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
87 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
88 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
89 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
90 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
91 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
92 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
93 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
94 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
96 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
97 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
98 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
99 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
100 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
101 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
102 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
103 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
104 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
105 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
106 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
107 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
108 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
109 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
110 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
111 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
112 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
113 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
114 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
115 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
116 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
117 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
118 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
119 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
120 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
121 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
122 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
123 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
124 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
125 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
126 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
127 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
128 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
129 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
130 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
131 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
132 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
133 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
134 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
135 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
136 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
137 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
144 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
145 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
148 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
149 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
150 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
151 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
152 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
153 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
154 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
155 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.56
Metatranscriptomes 0.44
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 8.73
Rhizosphere 89.52
Stem 0
Stem Tuber 0
Unclassified 0.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070713_100001095 3300005436 Bacteria 17316
2 LJNas_1000049 3300000546 Bacteria 16187
3 Ga0070683_100002994 3300005329 Bacteria 13552
4 Ga0068868_100010558 3300005338 Bacteria 6693
5 Ga0070660_100015010 3300005339 Bacteria 5586
6 Ga0070689_100020889 3300005340 Bacteria 4866
7 Ga0070661_100001728 3300005344 Bacteria 15146
8 Ga0070709_10000342 3300005434 Bacteria 29015
9 Ga0070714_100000231 3300005435 Bacteria 44130
10 Ga0070713_100000349 3300005436 Bacteria 30061
11 Ga0070713_100000465 3300005436 Bacteria 25843
12 Ga0070713_100010741 3300005436 Bacteria 6631
13 Ga0070711_100000222 3300005439 Bacteria 29997
14 Ga0070711_100000558 3300005439 Bacteria 19462
15 Ga0070711_100008356 3300005439 Bacteria 6340
16 Ga0070708_100000066 3300005445 Bacteria 68732
17 Ga0070708_100001244 3300005445 Bacteria 19587
18 Ga0070662_100000633 3300005457 Bacteria 21302
19 Ga0070681_10000104 3300005458 Bacteria 62963
20 Ga0070685_10008748 3300005466 Bacteria 5211
21 Ga0070706_100004368 3300005467 Bacteria 13656
22 Ga0070707_100009082 3300005468 Bacteria 9217
23 Ga0070698_100000007 3300005471 Bacteria 123996
24 Ga0070698_100012568 3300005471 Bacteria 8964
25 Ga0070679_100002149 3300005530 Bacteria 17771
26 Ga0070697_100000122 3300005536 Bacteria 61581
27 Ga0070697_100000416 3300005536 Bacteria 32887
28 Ga0070697_100007556 3300005536 Bacteria 8464
29 Ga0070665_100000633 3300005548 Bacteria 47882
30 Ga0070664_100000858 3300005564 Bacteria 23526
31 Ga0068857_100001095 3300005577 Bacteria 21020
32 Ga0068856_100002116 3300005614 Bacteria 20609
33 Ga0070702_100003575 3300005615 Bacteria 6976
34 Ga0068851_10000923 3300005834 Bacteria 12674
35 Ga0068858_100002636 3300005842 Bacteria 18073
36 Ga0070716_100000807 3300006173 Bacteria 13480
37 Ga0070716_100004217 3300006173 Bacteria 6844
38 Ga0070712_100000586 3300006175 Bacteria 21238
39 Ga0070712_100001271 3300006175 Bacteria 15230
40 Ga0070712_100001390 3300006175 Bacteria 14691
41 Ga0097621_100000022 3300006237 Bacteria 85005
42 Ga0097621_100003263 3300006237 Bacteria 11156
43 Ga0097621_100015917 3300006237 Bacteria 5672
44 Ga0068871_100000270 3300006358 Bacteria 35636
45 Ga0068871_100002194 3300006358 Bacteria 13264
46 Ga0068871_100003630 3300006358 Bacteria 10605
47 Ga0075433_10002290 3300006852 Bacteria 14572
48 Ga0075434_100000185 3300006871 Bacteria 40805
49 Ga0075434_100002760 3300006871 Bacteria 15529
50 Ga0068865_100008584 3300006881 Bacteria 6316
51 Ga0075436_100002190 3300006914 Bacteria 13476
52 Ga0105240_10039195 3300009093 Bacteria 6070
53 Ga0105245_10002353 3300009098 Bacteria 17103
54 Ga0105245_10011526 3300009098 Bacteria 7699
55 Ga0105237_10024528 3300009545 Bacteria 6168
56 Ga0105238_10004649 3300009551 Bacteria 13587
57 Ga0105238_10005918 3300009551 Bacteria 12120
58 Ga0105238_10016420 3300009551 Bacteria 7494
59 Ga0105239_10023477 3300010375 Bacteria 6793
60 Ga0105239_10024013 3300010375 Bacteria 6715
61 Ga0157369_10000034 3300013105 Bacteria 200710
62 Ga0157374_10000247 3300013296 Bacteria 49989
63 Ga0157374_10000324 3300013296 Bacteria 44409
64 Ga0157378_10000144 3300013297 Bacteria 67006
65 Ga0157378_10001033 3300013297 Bacteria 25432
66 Ga0157378_10005687 3300013297 Bacteria 10912
67 Ga0157372_10000726 3300013307 Bacteria 35909
68 Ga0157372_10008981 3300013307 Bacteria 10625
69 Ga0157372_10020228 3300013307 Bacteria 7178
70 Ga0157372_10043634 3300013307 Bacteria 4965
71 Ga0163163_10007887 3300014325 Bacteria 9413
72 Ga0182008_10005510 3300014497 Bacteria 7199
73 Ga0157379_10002167 3300014968 Bacteria 16314
74 Ga0157379_10018330 3300014968 Bacteria 6170
75 Ga0157376_10019760 3300014969 Bacteria 5198
76 Ga0213875_10000001 3300021388 Bacteria 2793540
77 Ga0228598_1000530 3300024227 Bacteria 7967
78 Ga0228598_1000750 3300024227 Bacteria 6959
79 Ga0207699_10000383 3300025906 Bacteria 23266
80 Ga0207699_10005197 3300025906 Bacteria 6223
81 Ga0207645_10000104 3300025907 Bacteria 62309
82 Ga0207684_10005718 3300025910 Bacteria 11424
83 Ga0207684_10009069 3300025910 Bacteria 8809
84 Ga0207693_10000142 3300025915 Bacteria 65780
85 Ga0207693_10000611 3300025915 Bacteria 31948
86 Ga0207663_10005772 3300025916 Bacteria 6268
87 Ga0207657_10000238 3300025919 Bacteria 58154
88 Ga0207657_10000584 3300025919 Bacteria 38781
89 Ga0207649_10000149 3300025920 Bacteria 57837
90 Ga0207652_10003920 3300025921 Bacteria 12161
91 Ga0207652_10006838 3300025921 Bacteria 9193
92 Ga0207646_10000356 3300025922 Bacteria 62109
93 Ga0207694_10001971 3300025924 Bacteria 16986
94 Ga0207650_10000170 3300025925 Bacteria 77357
95 Ga0207700_10000200 3300025928 Bacteria 35788
96 Ga0207700_10000933 3300025928 Bacteria 16806
97 Ga0207700_10003367 3300025928 Bacteria 9279
98 Ga0207700_10004748 3300025928 Bacteria 8062
99 Ga0207664_10000033 3300025929 Bacteria 176549
100 Ga0207706_10000491 3300025933 Bacteria 42248
101 Ga0207706_10002845 3300025933 Bacteria 16787
102 Ga0207670_10004130 3300025936 Bacteria 7776
103 Ga0207665_10001735 3300025939 Bacteria 14658
104 Ga0207665_10005989 3300025939 Bacteria 8081
105 Ga0207665_10007413 3300025939 Bacteria 7253
106 Ga0207667_10000395 3300025949 Bacteria 58872
107 Ga0207703_10005089 3300026035 Bacteria 10633
108 Ga0207703_10020617 3300026035 Bacteria 5156
109 Ga0207678_10001218 3300026067 Bacteria 23676
110 Ga0207702_10000479 3300026078 Bacteria 44958
111 Ga0207641_10000432 3300026088 Bacteria 48190
112 Ga0207648_10001369 3300026089 Bacteria 26899
113 Ga0207674_10001664 3300026116 Bacteria 28591
114 Ga0207674_10002609 3300026116 Bacteria 22615
115 Ga0207674_10005605 3300026116 Bacteria 14882
116 Ga0265356_1000886 3300028017 Bacteria 4904
117 Ga0268266_10000208 3300028379 Bacteria 102593
118 Ga0268265_10002360 3300028380 Bacteria 14297
119 Ga0265326_10002698 3300028558 Bacteria 5955
120 Ga0265318_10000435 3300028577 Bacteria 31727
121 Ga0265760_10000015 3300031090 Bacteria 91316
122 Ga0265329_10003761 3300031242 Bacteria 6523
123 Ga0265316_10005922 3300031344 Bacteria 11773
124 Ga0265314_10012744 3300031711 Bacteria 6833
125 Ga0265342_10005661 3300031712 Bacteria 9457
126 Ga0373923_0003805 3300035111 Bacteria 4904
127 Ga0373945_0000813 3300035116 Bacteria 9149
128 Ga0373956_0008407 3300035119 Bacteria 4178
129 Ga0373943_0000412 3300035170 Bacteria 18046
130 Ga0373955_0002390 3300035172 Bacteria 8177
131 Ga0373924_0000016 3300035410 Bacteria 43046
132 Ga0373935_0006964 3300035692 Bacteria 6749
133 Ga0373927_0000229 3300035695 Bacteria 44230
134 Ga0373927_0002591 3300035695 Bacteria 13180
135 Ga0373933_0003481 3300035724 Bacteria 8759
136 Ga0373947_0005273 3300035725 Bacteria 7555
137 Ga0373937_0000051 3300036401 Bacteria 104818
138 Ga0373937_0000119 3300036401 Bacteria 75565
139 Ga0373937_0010159 3300036401 Bacteria 8212
140 Ga0373937_0018817 3300036401 Bacteria 6174
141 Ga0373925_0001949 3300037068 Bacteria 17064
142 Ga0373925_0017422 3300037068 Bacteria 5207
143 Ga0436364_0273345 3300037853 Bacteria 2794207
144 Ga0436364_1057451 3300037853 Bacteria 4529
145 Ga0436365_0370511 3300039437 Bacteria 26229
146 Ga0451577_0001035 3300042876 Bacteria 40271
147 Ga0466963_0000193 3300044694 Bacteria 25611
148 Ga0453684_0001564 3300044712 Bacteria 63468
149 Ga0466958_0010623 3300045836 Bacteria 5162
150 Ga0466967_0002723 3300045976 Bacteria 11168
151 Ga0495603_0012385 3300046455 Bacteria 5165
152 Ga0495651_0001760 3300046462 Bacteria 16712
153 Ga0495580_0002150 3300046472 Bacteria 17310
154 Ga0495580_0009033 3300046472 Bacteria 7865
155 Ga0495580_0009442 3300046472 Bacteria 7673
156 Ga0495580_0020848 3300046472 Bacteria 4844
157 Ga0495639_0005626 3300046475 Bacteria 5397
158 Ga0495608_0002331 3300046511 Bacteria 13706
159 Ga0495618_0014290 3300046514 Unclassified 4835
160 Ga0495628_0000179 3300046516 Bacteria 55815
161 Ga0495630_0002487 3300046517 Bacteria 12769
162 Ga0495652_0000130 3300046529 Bacteria 83696
163 Ga0495665_0003819 3300046531 Bacteria 8151
164 Ga0495587_0000167 3300046536 Bacteria 47833
165 Ga0495587_0003253 3300046536 Bacteria 10856
166 Ga0495667_0004704 3300046559 Bacteria 9228
167 Ga0495657_0008019 3300046675 Bacteria 8097
168 Ga0495599_0002575 3300046678 Bacteria 10565
169 Ga0495623_0001836 3300046679 Bacteria 14242
170 Ga0495646_0001516 3300046680 Bacteria 13840
171 Ga0495613_0009098 3300046689 Bacteria 7365
172 Ga0495613_0014640 3300046689 Bacteria 5820
173 Ga0495624_0005777 3300046690 Bacteria 8862
174 Ga0495600_0001588 3300046809 Bacteria 12621
175 Ga0495604_0000407 3300047317 Bacteria 38791
176 Ga0495674_0019673 3300047319 Bacteria 6263
177 Ga0495680_0000203 3300047322 Bacteria 64243
178 Ga0495680_0002848 3300047322 Bacteria 17378
179 Ga0495675_0000012 3300047444 Bacteria 146748
180 Ga0495675_0006701 3300047444 Bacteria 7058
181 Ga0495593_0003333 3300047673 Bacteria 9622
182 Ga0495602_0000048 3300048088 Bacteria 116248
183 Ga0496102_0002663 3300048905 Bacteria 15189
184 Ga0496102_0007260 3300048905 Bacteria 9459
185 Ga0496103_0001749 3300048906 Bacteria 14179
186 Ga0496104_0017598 3300048907 Bacteria 6512
187 Ga0496104_0033941 3300048907 Bacteria 4757
188 Ga0496107_0013825 3300048910 Bacteria 5642
189 Ga0496107_0018646 3300048910 Bacteria 4889
190 Ga0496108_0000228 3300048911 Bacteria 50279
191 Ga0496109_0000362 3300048912 Bacteria 42175
192 Ga0496110_0004009 3300048913 Bacteria 11347
193 Ga0496110_0014511 3300048913 Bacteria 6546
194 Ga0496111_0000794 3300048914 Bacteria 16906
195 Ga0496111_0004580 3300048914 Bacteria 8755
196 Ga0496111_0015672 3300048914 Bacteria 5209
197 Ga0496112_0000034 3300048915 Bacteria 107237
198 Ga0496112_0000136 3300048915 Bacteria 45580
199 Ga0496112_0005347 3300048915 Bacteria 11087
200 Ga0496112_0020005 3300048915 Bacteria 6337
201 Ga0496112_0032862 3300048915 Bacteria 5038
202 Ga0496113_0000391 3300048916 Bacteria 21186
203 Ga0501032_0030807 3300049569 Bacteria 3680
204 Ga0501034_0002856 3300049571 Bacteria 20137
205 Ga0501034_0036520 3300049571 Bacteria 4977
206 Ga0501043_0003704 3300049579 Bacteria 12558
207 Ga0501046_0004811 3300049580 Bacteria 12174
208 Ga0501046_0006799 3300049580 Bacteria 10091
209 Ga0501047_0002648 3300049581 Bacteria 17040
210 Ga0501048_0003651 3300049582 Bacteria 11723
211 Ga0501073_0013063 3300049589 Bacteria 6056
212 Ga0501075_0004130 3300049591 Bacteria 9807
213 Ga0501077_0001547 3300049593 Bacteria 13864
214 Ga0501080_0005514 3300049742 Bacteria 11295
215 Ga0501080_0021963 3300049742 Bacteria 5910
216 Ga0501083_0018029 3300049744 Bacteria 4922
217 Ga0501044_0012906 3300049823 Bacteria 9042
218 Ga0501044_0026184 3300049823 Bacteria 6176
219 nmdc:mga0n895_8786_c1 3300050512 Bacteria 8786
220 nmdc:mga0rr50_2609_c1 3300050513 Bacteria 10218
221 nmdc:mga08x19_13984_c1 3300050514 Bacteria 4863
222 nmdc:mga08x19_188_c1 3300050514 Bacteria 49158
223 nmdc:mga08x19_3559_c1 3300050514 Bacteria 9270
224 nmdc:mga0a205_9280_c1 3300050515 Bacteria 8986
225 Ga0495612_0001044 3300053078 Bacteria 11341
226 Ga0501084_0001410 3300054114 Bacteria 19018
227 Ga0501084_0013442 3300054114 Bacteria 6774
228 Ga0501082_0000017 3300060353 Bacteria 114702
229 Ga0501082_0008962 3300060353 Bacteria 8635
230 Ga0070713_100001095
231 LJNas_1000049
232 Ga0070683_100002994
233 Ga0068868_100010558
234 Ga0070660_100015010
235 Ga0070689_100020889
236 Ga0070661_100001728
237 Ga0070709_10000342
238 Ga0070714_100000231
239 Ga0070713_100000349
240 Ga0070713_100000465
241 Ga0070713_100010741
242 Ga0070711_100000222
243 Ga0070711_100000558
244 Ga0070711_100008356
245 Ga0070708_100000066
246 Ga0070708_100001244
247 Ga0070662_100000633
248 Ga0070681_10000104
249 Ga0070685_10008748
250 Ga0070706_100004368
251 Ga0070707_100009082
252 Ga0070698_100000007
253 Ga0070698_100012568
254 Ga0070679_100002149
255 Ga0070697_100000122
256 Ga0070697_100000416
257 Ga0070697_100007556
258 Ga0070665_100000633
259 Ga0070664_100000858
260 Ga0068857_100001095
261 Ga0068856_100002116
262 Ga0070702_100003575
263 Ga0068851_10000923
264 Ga0068858_100002636
265 Ga0070716_100000807
266 Ga0070716_100004217
267 Ga0070712_100000586
268 Ga0070712_100001271
269 Ga0070712_100001390
270 Ga0097621_100000022
271 Ga0097621_100003263
272 Ga0097621_100015917
273 Ga0068871_100000270
274 Ga0068871_100002194
275 Ga0068871_100003630
276 Ga0075433_10002290
277 Ga0075434_100000185
278 Ga0075434_100002760
279 Ga0068865_100008584
280 Ga0075436_100002190
281 Ga0105240_10039195
282 Ga0105245_10002353
283 Ga0105245_10011526
284 Ga0105237_10024528
285 Ga0105238_10004649
286 Ga0105238_10005918
287 Ga0105238_10016420
288 Ga0105239_10023477
289 Ga0105239_10024013
290 Ga0157369_10000034
291 Ga0157374_10000247
292 Ga0157374_10000324
293 Ga0157378_10000144
294 Ga0157378_10001033
295 Ga0157378_10005687
296 Ga0157372_10000726
297 Ga0157372_10008981
298 Ga0157372_10020228
299 Ga0157372_10043634
300 Ga0163163_10007887
301 Ga0182008_10005510
302 Ga0157379_10002167
303 Ga0157379_10018330
304 Ga0157376_10019760
305 Ga0213875_10000001
306 Ga0228598_1000530
307 Ga0228598_1000750
308 Ga0207699_10000383
309 Ga0207699_10005197
310 Ga0207645_10000104
311 Ga0207684_10005718
312 Ga0207684_10009069
313 Ga0207693_10000142
314 Ga0207693_10000611
315 Ga0207663_10005772
316 Ga0207657_10000238
317 Ga0207657_10000584
318 Ga0207649_10000149
319 Ga0207652_10003920
320 Ga0207652_10006838
321 Ga0207646_10000356
322 Ga0207694_10001971
323 Ga0207650_10000170
324 Ga0207700_10000200
325 Ga0207700_10000933
326 Ga0207700_10003367
327 Ga0207700_10004748
328 Ga0207664_10000033
329 Ga0207706_10000491
330 Ga0207706_10002845
331 Ga0207670_10004130
332 Ga0207665_10001735
333 Ga0207665_10005989
334 Ga0207665_10007413
335 Ga0207667_10000395
336 Ga0207703_10005089
337 Ga0207703_10020617
338 Ga0207678_10001218
339 Ga0207702_10000479
340 Ga0207641_10000432
341 Ga0207648_10001369
342 Ga0207674_10001664
343 Ga0207674_10002609
344 Ga0207674_10005605
345 Ga0265356_1000886
346 Ga0268266_10000208
347 Ga0268265_10002360
348 Ga0265326_10002698
349 Ga0265318_10000435
350 Ga0265760_10000015
351 Ga0265329_10003761
352 Ga0265316_10005922
353 Ga0265314_10012744
354 Ga0265342_10005661
355 Ga0373923_0003805
356 Ga0373945_0000813
357 Ga0373956_0008407
358 Ga0373943_0000412
359 Ga0373955_0002390
360 Ga0373924_0000016
361 Ga0373935_0006964
362 Ga0373927_0000229
363 Ga0373927_0002591
364 Ga0373933_0003481
365 Ga0373947_0005273
366 Ga0373937_0000051
367 Ga0373937_0000119
368 Ga0373937_0010159
369 Ga0373937_0018817
370 Ga0373925_0001949
371 Ga0373925_0017422
372 Ga0436364_0273345
373 Ga0436364_1057451
374 Ga0436365_0370511
375 Ga0451577_0001035
376 Ga0466963_0000193
377 Ga0453684_0001564
378 Ga0466958_0010623
379 Ga0466967_0002723
380 Ga0495603_0012385
381 Ga0495651_0001760
382 Ga0495580_0002150
383 Ga0495580_0009033
384 Ga0495580_0009442
385 Ga0495580_0020848
386 Ga0495639_0005626
387 Ga0495608_0002331
388 Ga0495618_0014290
389 Ga0495628_0000179
390 Ga0495630_0002487
391 Ga0495652_0000130
392 Ga0495665_0003819
393 Ga0495587_0000167
394 Ga0495587_0003253
395 Ga0495667_0004704
396 Ga0495657_0008019
397 Ga0495599_0002575
398 Ga0495623_0001836
399 Ga0495646_0001516
400 Ga0495613_0009098
401 Ga0495613_0014640
402 Ga0495624_0005777
403 Ga0495600_0001588
404 Ga0495604_0000407
405 Ga0495674_0019673
406 Ga0495680_0000203
407 Ga0495680_0002848
408 Ga0495675_0000012
409 Ga0495675_0006701
410 Ga0495593_0003333
411 Ga0495602_0000048
412 Ga0496102_0002663
413 Ga0496102_0007260
414 Ga0496103_0001749
415 Ga0496104_0017598
416 Ga0496104_0033941
417 Ga0496107_0013825
418 Ga0496107_0018646
419 Ga0496108_0000228
420 Ga0496109_0000362
421 Ga0496110_0004009
422 Ga0496110_0014511
423 Ga0496111_0000794
424 Ga0496111_0004580
425 Ga0496111_0015672
426 Ga0496112_0000034
427 Ga0496112_0000136
428 Ga0496112_0005347
429 Ga0496112_0020005
430 Ga0496112_0032862
431 Ga0496113_0000391
432 Ga0501032_0030807
433 Ga0501034_0002856
434 Ga0501034_0036520
435 Ga0501043_0003704
436 Ga0501046_0004811
437 Ga0501046_0006799
438 Ga0501047_0002648
439 Ga0501048_0003651
440 Ga0501073_0013063
441 Ga0501075_0004130
442 Ga0501077_0001547
443 Ga0501080_0005514
444 Ga0501080_0021963
445 Ga0501083_0018029
446 Ga0501044_0012906
447 Ga0501044_0026184
448 nmdc:mga0n895_8786_c1
449 nmdc:mga0rr50_2609_c1
450 nmdc:mga08x19_13984_c1
451 nmdc:mga08x19_188_c1
452 nmdc:mga08x19_3559_c1
453 nmdc:mga0a205_9280_c1
454 Ga0495612_0001044
455 Ga0501084_0001410
456 Ga0501084_0013442
457 Ga0501082_0000017
458 Ga0501082_0008962

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08494

DEAD_assoc

DEAD/H associated

747

949

0.97

PF23234

1497

1583

0.94

PF00271

Helicase_C

Helicase conserved C-terminal domain

312

423

0.91

PF23235

1269

1352

0.9

PF19306

Lhr_WH

Helicase Lhr winged helix domain

524

668

0.89

PF00270

DEAD

DEAD/DEAH box helicase

27

217

0.84

PF04851

ResIII

Type III restriction enzyme, res subunit

27

212

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
5v9x-assembly1.cif.gz_A structure of mycobacterium smegmatis helicase lhr bound to ssdna and amp-pnp 0.9047 18 861
5v9x-assembly1.cif.gz_A structure of mycobacterium smegmatis helicase lhr bound to ssdna and amp-pnp 0.8968 18 861
4kmf-assembly1.cif.gz_A-2 crystal structure of zalpha domain from carassius auratus pkz in complex with z-dna 0.8505 1208 1259
1t6n-assembly1.cif.gz_B crystal structure of the n-terminal domain of human uap56 0.848 24 250
6uv3-assembly1.cif.gz_A crystal structure of the core domain of rna helicase ddx17 with rna pri-125a-oligo2 0.8276 24 418
ID Description Score Start End Superfamily
af_Q57742_9_241_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9534 20 253 3.40.50.300
af_P96901_4_230_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9467 18 248 3.40.50.300
af_P96901_4_230_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9346 18 248 3.40.50.300
af_Q57742_9_241_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9216 20 253 3.40.50.300
af_Q9FT69_484_600_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9165 292 395 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A662FEV4-F1-model_v4 Helicase ATP-binding domain-containing protein 0.9646 20 193 GO:0003677
GO:0005524
GO:0016887
GO:0071103
GO:0140097
AF-A0A3E0P1Y1-F1-model_v4 DEAD/DEAH box helicase 0.9345 23 219 GO:0003677
GO:0004386
GO:0005524
GO:0016887
AF-A0A832Z3D0-F1-model_v4 deleted 0.9238 24 413
AF-A0A3E0P1Y1-F1-model_v4 DEAD/DEAH box helicase 0.9208 23 219 GO:0003677
GO:0004386
GO:0005524
GO:0016887
AF-A0A843IZS2-F1-model_v4 DEAD/DEAH box helicase 0.9187 20 221 GO:0003677
GO:0004386
GO:0005524
GO:0016887
GO:0071103
GO:0140097

Map