F341749

General Info

Members Datasets Scaffolds Average Seq Length
229 143 458 379

Family's Representative Sequence

Representative Sequence 3300005435|Ga0070714_100055976|Ga0070714_1000559763
Length 420
Sequence VEQQPAIEQHGATDPPVVANAATGESELAEHRTTPVELLWDLVFVFAVTEVSSLMSHDLTWGWFARSMLVLALVWWAWSAFVWAANAQNATSGTVRACLLISTAVIFITGLSVPGAFGSDGTVFAVSYAIVRFMHLALYADASRQGNASWSAIAGFAVTVVIGMALLIVGSFFHGGTRVVLWAAAVAIDYAGPAWLTRERLRGLQHVAVAHFAERYGLFVIICLGESIVAIGLGAAAGHPHLGAQLITAVTLALLITIGMWWTYFDRYAATAEERLREHDDPVLAAADGYSYLHLLIVAGIITFAVGARVLVRHFGVSIPDAPRLALCGGVALYLVGHVGFRWRLSGEVEREKLALAAALLVLYAAGSALAGWVLAAVIAVLLAGLCAVETTAERDGSFFARERAGKHQASEDPVPPLVK

Samples

Sample ID Description Type Environment
1 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
30 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
31 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
32 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
33 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
45 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
46 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
47 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
48 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
79 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
81 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
82 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
83 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
84 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
85 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
86 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
87 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
88 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
89 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
90 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
91 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
92 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
93 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
94 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
95 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
96 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
97 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
98 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
99 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
100 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
101 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
102 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
103 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
104 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
105 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
106 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
107 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
108 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
109 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
110 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
111 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
112 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
113 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
114 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
115 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
116 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
117 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
118 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
119 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
120 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
121 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
122 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
123 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
124 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
125 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
126 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
127 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
128 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
129 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
132 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
133 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
134 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
135 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
136 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
137 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
138 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
139 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
140 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
141 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
142 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
143 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.56
Metatranscriptomes 0.44
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 13.97
Rhizosphere 74.67
Stem 0
Stem Tuber 0
Unclassified 7.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070714_100055976 3300005435 Bacteria 3372
2 Ga0070683_100067805 3300005329 Bacteria 3323
3 Ga0070680_100066462 3300005336 Bacteria 2957
4 Ga0070680_100130661 3300005336 Unclassified 2101
5 Ga0070660_100000326 3300005339 Bacteria 31349
6 Ga0070660_100043877 3300005339 Bacteria 3418
7 Ga0070660_100189953 3300005339 Bacteria 1664
8 Ga0070689_100046646 3300005340 Bacteria 3339
9 Ga0070661_100200483 3300005344 Bacteria 1525
10 Ga0070692_10113195 3300005345 Bacteria 1504
11 Ga0070671_100055800 3300005355 Bacteria 3287
12 Ga0070674_100107161 3300005356 Bacteria 2046
13 Ga0070688_100050143 3300005365 Bacteria 2600
14 Ga0070659_100024485 3300005366 Bacteria 4627
15 Ga0070714_100061279 3300005435 Bacteria 3231
16 Ga0070714_100252659 3300005435 Unclassified 1630
17 Ga0070713_100029482 3300005436 Bacteria 4348
18 Ga0070713_100163640 3300005436 Bacteria 1988
19 Ga0070710_10018984 3300005437 Bacteria 3547
20 Ga0070710_10075156 3300005437 Bacteria 1957
21 Ga0070711_100063738 3300005439 Bacteria 2573
22 Ga0070700_100013980 3300005441 Bacteria 4524
23 Ga0070681_10000927 3300005458 Bacteria 24715
24 Ga0070681_10127233 3300005458 Bacteria 2480
25 Ga0070685_10112604 3300005466 Bacteria 1679
26 Ga0070679_100006563 3300005530 Bacteria 10840
27 Ga0070684_100092966 3300005535 Bacteria 2684
28 Ga0070684_100221151 3300005535 Bacteria 1727
29 Ga0068853_100320777 3300005539 Bacteria 1436
30 Ga0070672_100136423 3300005543 Bacteria 2021
31 Ga0070665_100008502 3300005548 Bacteria 10381
32 Ga0068855_100041410 3300005563 Bacteria 5459
33 Ga0068855_100146123 3300005563 Bacteria 2691
34 Ga0068855_100185641 3300005563 Bacteria 2348
35 Ga0068854_100000431 3300005578 Bacteria 26012
36 Ga0068856_100016545 3300005614 Bacteria 7139
37 Ga0070702_100076645 3300005615 Bacteria 1990
38 Ga0068864_100141756 3300005618 Bacteria 2168
39 Ga0068861_100019937 3300005719 Bacteria 4794
40 Ga0068851_10001111 3300005834 Bacteria 11659
41 Ga0068870_10010358 3300005840 Bacteria 4282
42 Ga0070712_100017308 3300006175 Bacteria 4664
43 Ga0075429_100101242 3300006880 Unclassified 2515
44 Ga0068865_100000001 3300006881 Bacteria 288199
45 Ga0068865_100082657 3300006881 Bacteria 2309
46 Ga0075436_100001345 3300006914 Bacteria 16726
47 Ga0105245_10008747 3300009098 Bacteria 8829
48 Ga0105242_10087305 3300009176 Bacteria 2619
49 Ga0105237_10042279 3300009545 Bacteria 4597
50 Ga0105249_10071945 3300009553 Bacteria 3196
51 Ga0157370_10063200 3300013104 Bacteria 3509
52 Ga0157370_10123289 3300013104 Unclassified 2419
53 Ga0157374_10026356 3300013296 Bacteria 5230
54 Ga0157372_10020720 3300013307 Bacteria 7097
55 Ga0157372_10138121 3300013307 Bacteria 2808
56 Ga0157372_10158064 3300013307 Unclassified 2618
57 Ga0157375_10176033 3300013308 Bacteria 2289
58 Ga0163163_10297086 3300014325 Bacteria 1667
59 Ga0163163_10353767 3300014325 Bacteria 1525
60 Ga0206356_10390483 3300020070 Bacteria 1941
61 Ga0213874_10000007 3300021377 Bacteria 25071
62 Ga0213874_10004279 3300021377 Bacteria 3238
63 Ga0213874_10007419 3300021377 Bacteria 2633
64 Ga0213876_10007340 3300021384 Bacteria 5997
65 Ga0213876_10015704 3300021384 Bacteria 4008
66 Ga0213875_10036684 3300021388 Bacteria 2311
67 Ga0213875_10052124 3300021388 Bacteria 1916
68 Ga0207656_10004147 3300025321 Bacteria 5039
69 Ga0207692_10114884 3300025898 Bacteria 1499
70 Ga0207710_10037397 3300025900 Bacteria 2144
71 Ga0207643_10087796 3300025908 Bacteria 1809
72 Ga0207707_10004307 3300025912 Bacteria 12600
73 Ga0207707_10006915 3300025912 Bacteria 9897
74 Ga0207671_10059024 3300025914 Bacteria 2844
75 Ga0207663_10153802 3300025916 Bacteria 1616
76 Ga0207660_10002829 3300025917 Bacteria 11375
77 Ga0207660_10091795 3300025917 Unclassified 2253
78 Ga0207662_10080062 3300025918 Bacteria 1992
79 Ga0207657_10001525 3300025919 Bacteria 24807
80 Ga0207657_10008857 3300025919 Bacteria 10178
81 Ga0207657_10083774 3300025919 Bacteria 2674
82 Ga0207652_10005318 3300025921 Bacteria 10444
83 Ga0207652_10007468 3300025921 Bacteria 8810
84 Ga0207652_10128211 3300025921 Unclassified 2261
85 Ga0207681_10094885 3300025923 Bacteria 2139
86 Ga0207694_10256302 3300025924 Bacteria 1432
87 Ga0207687_10005840 3300025927 Bacteria 8142
88 Ga0207687_10021586 3300025927 Bacteria 4278
89 Ga0207700_10141121 3300025928 Bacteria 1980
90 Ga0207664_10174288 3300025929 Bacteria 1843
91 Ga0207686_10049435 3300025934 Bacteria 2610
92 Ga0207686_10079009 3300025934 Bacteria 2141
93 Ga0207709_10075089 3300025935 Bacteria 2159
94 Ga0207669_10065963 3300025937 Bacteria 2249
95 Ga0207669_10114286 3300025937 Bacteria 1817
96 Ga0207704_10000012 3300025938 Bacteria 178319
97 Ga0207691_10123133 3300025940 Bacteria 2296
98 Ga0207689_10056485 3300025942 Bacteria 3231
99 Ga0207667_10223405 3300025949 Unclassified 1929
100 Ga0207667_10231016 3300025949 Unclassified 1894
101 Ga0207640_10000270 3300025981 Bacteria 35099
102 Ga0207678_10054375 3300026067 Bacteria 3448
103 Ga0207708_10014232 3300026075 Bacteria 5950
104 Ga0207648_10064237 3300026089 Bacteria 3199
105 Ga0207675_100131793 3300026118 Bacteria 2371
106 Ga0268265_10059841 3300028380 Bacteria 2917
107 Ga0268264_10084161 3300028381 Bacteria 2726
108 Ga0265327_10024549 3300031251 Bacteria 3538
109 Ga0373937_0030288 3300036401 Bacteria 4901
110 Ga0395898_0282692 3300037466 Bacteria 1583
111 Ga0436364_0115719 3300037853 Bacteria 4487
112 Ga0436364_0181460 3300037853 Bacteria 6384
113 Ga0436364_0226038 3300037853 Bacteria 2417
114 Ga0436364_0283140 3300037853 Bacteria 2187
115 Ga0436364_0313649 3300037853 Bacteria 7774
116 Ga0436364_1304685 3300037853 Bacteria 6609
117 Ga0436364_1336042 3300037853 Bacteria 2336
118 Ga0436365_0528908 3300039437 Bacteria 14388
119 Ga0436365_0706206 3300039437 Bacteria 23664
120 Ga0436365_0830384 3300039437 Bacteria 17524
121 Ga0436365_1041842 3300039437 Bacteria 7611
122 Ga0436365_1246114 3300039437 Bacteria 5760
123 Ga0436365_1250159 3300039437 Bacteria 1838
124 Ga0436365_1271564 3300039437 Bacteria 4977
125 Ga0436363_0357411 3300039450 Bacteria 40060
126 Ga0436363_0717686 3300039450 Bacteria 2675
127 Ga0436363_1301036 3300039450 Bacteria 2359
128 Ga0436363_1382151 3300039450 Bacteria 2076
129 Ga0436363_1679397 3300039450 Bacteria 7523
130 Ga0436362_0200671 3300039453 Bacteria 3845
131 Ga0436362_0476476 3300039453 Bacteria 2826
132 Ga0466966_0009122 3300044684 Bacteria 6570
133 Ga0466961_0012527 3300044693 Bacteria 5427
134 Ga0466963_0052200 3300044694 Unclassified 2712
135 Ga0466963_0239686 3300044694 Bacteria 1272
136 Ga0466964_0000859 3300044706 Bacteria 9943
137 Ga0466971_0000312 3300044719 Bacteria 18692
138 Ga0466971_0010254 3300044719 Bacteria 4092
139 Ga0466971_0041040 3300044719 Bacteria 2079
140 Ga0466957_0004323 3300044842 Bacteria 7887
141 Ga0466960_0006843 3300044901 Bacteria 4597
142 Ga0466959_0001515 3300045049 Bacteria 14263
143 Ga0466959_0154409 3300045049 Bacteria 1616
144 Ga0466958_0001386 3300045836 Bacteria 11467
145 Ga0466958_0016838 3300045836 Bacteria 4217
146 Ga0466958_0124750 3300045836 Bacteria 1614
147 Ga0466967_0002324 3300045976 Bacteria 11755
148 Ga0466967_0023598 3300045976 Bacteria 5045
149 Ga0466967_0027680 3300045976 Bacteria 4718
150 Ga0466967_0088791 3300045976 Bacteria 2805
151 Ga0466967_0139197 3300045976 Bacteria 2259
152 Ga0466967_0156783 3300045976 Bacteria 2133
153 Ga0466967_0488367 3300045976 Bacteria 1207
154 Ga0495629_0292225 3300046459 Unclassified 1117
155 Ga0495641_0030713 3300046461 Bacteria 2573
156 Ga0495641_0061450 3300046461 Unclassified 1696
157 Ga0495651_0009119 3300046462 Bacteria 7616
158 Ga0495608_0000063 3300046511 Bacteria 83763
159 Ga0495608_0007861 3300046511 Bacteria 7494
160 Ga0495618_0208574 3300046514 Unclassified 1235
161 Ga0495640_0029913 3300046533 Bacteria 3903
162 Ga0495587_0019932 3300046536 Bacteria 4145
163 Ga0495587_0132929 3300046536 Bacteria 1422
164 Ga0495667_0046965 3300046559 Bacteria 2853
165 Ga0495634_0094540 3300046642 Bacteria 1937
166 Ga0495635_0167549 3300046663 Bacteria 1494
167 Ga0495588_0066474 3300046674 Bacteria 1871
168 Ga0495657_0000084 3300046675 Bacteria 83088
169 Ga0495657_0007025 3300046675 Bacteria 8735
170 Ga0495599_0066877 3300046678 Bacteria 2245
171 Ga0495623_0067984 3300046679 Bacteria 2223
172 Ga0495658_0001443 3300046683 Bacteria 12498
173 Ga0495613_0037513 3300046689 Bacteria 3593
174 Ga0495600_0023420 3300046809 Bacteria 3973
175 Ga0495680_0005065 3300047322 Bacteria 12439
176 Ga0495675_0000067 3300047444 Bacteria 71740
177 Ga0495675_0017292 3300047444 Bacteria 4569
178 Ga0495684_0042093 3300047471 Bacteria 3499
179 Ga0495602_0013680 3300048088 Bacteria 8278
180 Ga0495602_0286591 3300048088 Bacteria 1211
181 Ga0496101_0210748 3300048904 Bacteria 1505
182 Ga0496102_0002589 3300048905 Bacteria 15426
183 Ga0496104_0031044 3300048907 Bacteria 4967
184 Ga0496104_0083255 3300048907 Bacteria 3051
185 Ga0496104_0320312 3300048907 Unclassified 1463
186 Ga0496104_0367490 3300048907 Bacteria 1351
187 Ga0496105_0001786 3300048908 Bacteria 15368
188 Ga0496105_0240450 3300048908 Bacteria 1469
189 Ga0496106_0005960 3300048909 Bacteria 9001
190 Ga0496106_0034267 3300048909 Bacteria 3792
191 Ga0496106_0305496 3300048909 Bacteria 1276
192 Ga0496106_0320988 3300048909 Unclassified 1243
193 Ga0496107_0134116 3300048910 Bacteria 1829
194 Ga0496107_0249512 3300048910 Unclassified 1321
195 Ga0496108_0000254 3300048911 Bacteria 46564
196 Ga0496108_0056692 3300048911 Bacteria 3292
197 Ga0496108_0065913 3300048911 Bacteria 3053
198 Ga0496109_0000321 3300048912 Bacteria 45109
199 Ga0496109_0069378 3300048912 Bacteria 3232
200 Ga0496109_0130631 3300048912 Bacteria 2344
201 Ga0496110_0000004 3300048913 Bacteria 122867
202 Ga0496110_0122797 3300048913 Bacteria 2341
203 Ga0496110_0139893 3300048913 Bacteria 2188
204 Ga0496110_0206697 3300048913 Bacteria 1784
205 Ga0496111_0000002 3300048914 Bacteria 135794
206 Ga0496111_0045026 3300048914 Bacteria 3173
207 Ga0496111_0050589 3300048914 Bacteria 2998
208 Ga0496111_0217456 3300048914 Bacteria 1419
209 Ga0496112_0155217 3300048915 Bacteria 2256
210 Ga0496114_0065625 3300048917 Bacteria 3041
211 Ga0496115_0000616 3300048918 Bacteria 27043
212 Ga0496115_0295366 3300048918 Unclassified 1328
213 Ga0501034_0215806 3300049571 Bacteria 1872
214 Ga0501047_0004868 3300049581 Bacteria 12610
215 Ga0501067_0007238 3300049583 Bacteria 6162
216 Ga0501068_0059834 3300049584 Bacteria 2313
217 Ga0501069_0001347 3300049585 Bacteria 12041
218 Ga0501070_0054906 3300049586 Bacteria 3303
219 Ga0501044_0419572 3300049823 Bacteria 1248
220 nmdc:mga05p37_4116_c1 3300050507 Bacteria 13607
221 nmdc:mga09592_1822_c1 3300050508 Bacteria 17117
222 nmdc:mga08x19_7673_c1 3300050514 Bacteria 6405
223 Ga0495601_0220988 3300053077 Bacteria 1237
224 Ga0495612_0052130 3300053078 Bacteria 1683
225 Ga0495595_0000001 3300053084 Bacteria 495226
226 Ga0495595_0004696 3300053084 Bacteria 5496
227 Ga0495619_0000065 3300053085 Bacteria 83763
228 Ga0495619_0000479 3300053085 Bacteria 26801
229 Ga0530510_0082440 3300061734 Bacteria 2342
230 Ga0070714_100055976
231 Ga0070683_100067805
232 Ga0070680_100066462
233 Ga0070680_100130661
234 Ga0070660_100000326
235 Ga0070660_100043877
236 Ga0070660_100189953
237 Ga0070689_100046646
238 Ga0070661_100200483
239 Ga0070692_10113195
240 Ga0070671_100055800
241 Ga0070674_100107161
242 Ga0070688_100050143
243 Ga0070659_100024485
244 Ga0070714_100061279
245 Ga0070714_100252659
246 Ga0070713_100029482
247 Ga0070713_100163640
248 Ga0070710_10018984
249 Ga0070710_10075156
250 Ga0070711_100063738
251 Ga0070700_100013980
252 Ga0070681_10000927
253 Ga0070681_10127233
254 Ga0070685_10112604
255 Ga0070679_100006563
256 Ga0070684_100092966
257 Ga0070684_100221151
258 Ga0068853_100320777
259 Ga0070672_100136423
260 Ga0070665_100008502
261 Ga0068855_100041410
262 Ga0068855_100146123
263 Ga0068855_100185641
264 Ga0068854_100000431
265 Ga0068856_100016545
266 Ga0070702_100076645
267 Ga0068864_100141756
268 Ga0068861_100019937
269 Ga0068851_10001111
270 Ga0068870_10010358
271 Ga0070712_100017308
272 Ga0075429_100101242
273 Ga0068865_100000001
274 Ga0068865_100082657
275 Ga0075436_100001345
276 Ga0105245_10008747
277 Ga0105242_10087305
278 Ga0105237_10042279
279 Ga0105249_10071945
280 Ga0157370_10063200
281 Ga0157370_10123289
282 Ga0157374_10026356
283 Ga0157372_10020720
284 Ga0157372_10138121
285 Ga0157372_10158064
286 Ga0157375_10176033
287 Ga0163163_10297086
288 Ga0163163_10353767
289 Ga0206356_10390483
290 Ga0213874_10000007
291 Ga0213874_10004279
292 Ga0213874_10007419
293 Ga0213876_10007340
294 Ga0213876_10015704
295 Ga0213875_10036684
296 Ga0213875_10052124
297 Ga0207656_10004147
298 Ga0207692_10114884
299 Ga0207710_10037397
300 Ga0207643_10087796
301 Ga0207707_10004307
302 Ga0207707_10006915
303 Ga0207671_10059024
304 Ga0207663_10153802
305 Ga0207660_10002829
306 Ga0207660_10091795
307 Ga0207662_10080062
308 Ga0207657_10001525
309 Ga0207657_10008857
310 Ga0207657_10083774
311 Ga0207652_10005318
312 Ga0207652_10007468
313 Ga0207652_10128211
314 Ga0207681_10094885
315 Ga0207694_10256302
316 Ga0207687_10005840
317 Ga0207687_10021586
318 Ga0207700_10141121
319 Ga0207664_10174288
320 Ga0207686_10049435
321 Ga0207686_10079009
322 Ga0207709_10075089
323 Ga0207669_10065963
324 Ga0207669_10114286
325 Ga0207704_10000012
326 Ga0207691_10123133
327 Ga0207689_10056485
328 Ga0207667_10223405
329 Ga0207667_10231016
330 Ga0207640_10000270
331 Ga0207678_10054375
332 Ga0207708_10014232
333 Ga0207648_10064237
334 Ga0207675_100131793
335 Ga0268265_10059841
336 Ga0268264_10084161
337 Ga0265327_10024549
338 Ga0373937_0030288
339 Ga0395898_0282692
340 Ga0436364_0115719
341 Ga0436364_0181460
342 Ga0436364_0226038
343 Ga0436364_0283140
344 Ga0436364_0313649
345 Ga0436364_1304685
346 Ga0436364_1336042
347 Ga0436365_0528908
348 Ga0436365_0706206
349 Ga0436365_0830384
350 Ga0436365_1041842
351 Ga0436365_1246114
352 Ga0436365_1250159
353 Ga0436365_1271564
354 Ga0436363_0357411
355 Ga0436363_0717686
356 Ga0436363_1301036
357 Ga0436363_1382151
358 Ga0436363_1679397
359 Ga0436362_0200671
360 Ga0436362_0476476
361 Ga0466966_0009122
362 Ga0466961_0012527
363 Ga0466963_0052200
364 Ga0466963_0239686
365 Ga0466964_0000859
366 Ga0466971_0000312
367 Ga0466971_0010254
368 Ga0466971_0041040
369 Ga0466957_0004323
370 Ga0466960_0006843
371 Ga0466959_0001515
372 Ga0466959_0154409
373 Ga0466958_0001386
374 Ga0466958_0016838
375 Ga0466958_0124750
376 Ga0466967_0002324
377 Ga0466967_0023598
378 Ga0466967_0027680
379 Ga0466967_0088791
380 Ga0466967_0139197
381 Ga0466967_0156783
382 Ga0466967_0488367
383 Ga0495629_0292225
384 Ga0495641_0030713
385 Ga0495641_0061450
386 Ga0495651_0009119
387 Ga0495608_0000063
388 Ga0495608_0007861
389 Ga0495618_0208574
390 Ga0495640_0029913
391 Ga0495587_0019932
392 Ga0495587_0132929
393 Ga0495667_0046965
394 Ga0495634_0094540
395 Ga0495635_0167549
396 Ga0495588_0066474
397 Ga0495657_0000084
398 Ga0495657_0007025
399 Ga0495599_0066877
400 Ga0495623_0067984
401 Ga0495658_0001443
402 Ga0495613_0037513
403 Ga0495600_0023420
404 Ga0495680_0005065
405 Ga0495675_0000067
406 Ga0495675_0017292
407 Ga0495684_0042093
408 Ga0495602_0013680
409 Ga0495602_0286591
410 Ga0496101_0210748
411 Ga0496102_0002589
412 Ga0496104_0031044
413 Ga0496104_0083255
414 Ga0496104_0320312
415 Ga0496104_0367490
416 Ga0496105_0001786
417 Ga0496105_0240450
418 Ga0496106_0005960
419 Ga0496106_0034267
420 Ga0496106_0305496
421 Ga0496106_0320988
422 Ga0496107_0134116
423 Ga0496107_0249512
424 Ga0496108_0000254
425 Ga0496108_0056692
426 Ga0496108_0065913
427 Ga0496109_0000321
428 Ga0496109_0069378
429 Ga0496109_0130631
430 Ga0496110_0000004
431 Ga0496110_0122797
432 Ga0496110_0139893
433 Ga0496110_0206697
434 Ga0496111_0000002
435 Ga0496111_0045026
436 Ga0496111_0050589
437 Ga0496111_0217456
438 Ga0496112_0155217
439 Ga0496114_0065625
440 Ga0496115_0000616
441 Ga0496115_0295366
442 Ga0501034_0215806
443 Ga0501047_0004868
444 Ga0501067_0007238
445 Ga0501068_0059834
446 Ga0501069_0001347
447 Ga0501070_0054906
448 Ga0501044_0419572
449 nmdc:mga05p37_4116_c1
450 nmdc:mga09592_1822_c1
451 nmdc:mga08x19_7673_c1
452 Ga0495601_0220988
453 Ga0495612_0052130
454 Ga0495595_0000001
455 Ga0495595_0004696
456 Ga0495619_0000065
457 Ga0495619_0000479
458 Ga0530510_0082440

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06772

LtrA

Bacterial low temperature requirement A protein (LtrA)

32

388

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
5vre-assembly1.cif.gz_D crystal structure of a lysosomal potassium-selective channel tmem175 homolog from chamaesiphon minutus 0.7055 9 165
5vre-assembly1.cif.gz_D crystal structure of a lysosomal potassium-selective channel tmem175 homolog from chamaesiphon minutus 0.6034 9 165
6w8o-assembly1.cif.gz_B structure of an apo membrane protein 0.5409 14 335
7unm-assembly1.cif.gz_A human tmem175 in an closed state 0.5184 10 335
6w8o-assembly1.cif.gz_B structure of an apo membrane protein 0.5049 14 335
ID Description Score Start End Superfamily
af_Q9Y7U1_22_240_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.5226 11 173 1.20.1070.10
af_A0A0R0HZP3_70_270_1.20.1410.10 Mainly Alpha;Up-down Bundle;I/LWEQ domain;I/LWEQ domain 0.5219 182 335 1.20.1410.10
af_A0A2R8RK24_6_216_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.5071 9 173 1.20.1070.10
af_B5DEF4_7_226_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.492 9 180 1.20.1070.10
af_Q9U3J7_2_215_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.4798 9 172 1.20.1070.10
ID Description Score Start End GO Terms
AF-A0A538KSV5-F1-model_v4 Low temperature requirement protein A 0.9937 2 286 GO:0016020
AF-A0A538C2R4-F1-model_v4 Low temperature requirement protein A 0.9853 4 335 GO:0016020
AF-A0A538LD35-F1-model_v4 Low temperature requirement protein A 0.984 2 335 GO:0016020
AF-A0A2A3I7Q1-F1-model_v4 deleted 0.9628 4 335
AF-A0A538C764-F1-model_v4 Low temperature requirement protein A 0.9626 5 335 GO:0016020

Map