F340841

General Info

Members Datasets Scaffolds Average Seq Length
228 141 456 339

Family's Representative Sequence

Representative Sequence 3300006847|Ga0075431_100049540|Ga0075431_1000495401
Length 371
Sequence MREKVQQLREEFERKYREMKTSADWQEVKDRFLGRKSGELTALMKTLGSLAADARKQVGAELNEQLKGERVDVTLPGRPPRVGRRHPLTVVREQLESIFLSMGYEVYESREVEDDYHCFEAVNMPPDHPAREMQDTFYLARDQSVLLRTHTSAAQIRYMLSNPHPPHVRIICPGRVYRRDSDITHSPMFHQIEGLVVGEDISLGDLKGSIEAFLHALFGAQYPVRFRSSFFPYTEPSVEVDLGCIVCGGSGFLPESGASSHSSATTALRASPSDAGGTAGPDTAPAPRPPGPPCRICKATGWVEILGSGMVHPAVFEAVNSRLGRKVYDPDAISGFAFGIGIERVAMIRHGIDDIRLFYEGDLRFLEQFGA

Samples

Sample ID Description Type Environment
1 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
42 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
43 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
44 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
45 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
46 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
87 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
88 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
91 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
92 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
93 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
94 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
95 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
96 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
97 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
98 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
99 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
100 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
101 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
102 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
103 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
104 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
105 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
106 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
107 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
108 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
109 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
110 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
111 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
112 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
113 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
114 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
120 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
121 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
122 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
123 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
125 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
126 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
127 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
128 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
129 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
130 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
131 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
132 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
133 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
134 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
135 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
136 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
137 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
138 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
139 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
140 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
141 2671180531 Gemmata sp. SH-PL17 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.12
Metatranscriptomes 0.44
Isolates 0.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.26
Nodule 0
Rhizoplane 2.63
Rhizosphere 90.35
Stem 0
Stem Tuber 0
Unclassified 1.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075431_100049540 3300006847 Bacteria 4331
2 JGI25407J50210_10000028 3300003373 Bacteria 15088
3 Ga0058860_12211021 3300004801 Bacteria 4320
4 Ga0070690_100007734 3300005330 Bacteria 6161
5 Ga0068869_100009803 3300005334 Bacteria 6220
6 Ga0070689_100016717 3300005340 Bacteria 5372
7 Ga0070689_100093269 3300005340 Bacteria 2376
8 Ga0070687_100012262 3300005343 Bacteria 3778
9 Ga0070668_100160126 3300005347 Bacteria 1826
10 Ga0070674_100018637 3300005356 Bacteria 4393
11 Ga0070667_100203373 3300005367 Bacteria 1758
12 Ga0070703_10027885 3300005406 Bacteria 1685
13 Ga0070713_100056865 3300005436 Bacteria 3255
14 Ga0070701_10026186 3300005438 Bacteria 2841
15 Ga0070705_100052626 3300005440 Bacteria 2380
16 Ga0070700_100003034 3300005441 Bacteria 8604
17 Ga0070700_100019729 3300005441 Bacteria 3895
18 Ga0070694_100006861 3300005444 Bacteria 6919
19 Ga0070694_100095435 3300005444 Bacteria 2094
20 Ga0070708_100109182 3300005445 Bacteria 2541
21 Ga0070663_100071277 3300005455 Bacteria 2528
22 Ga0068867_100030410 3300005459 Bacteria 3896
23 Ga0070685_10035040 3300005466 Bacteria 2830
24 Ga0070685_10053200 3300005466 Bacteria 2345
25 Ga0070706_100034227 3300005467 Bacteria 4692
26 Ga0070706_100058474 3300005467 Bacteria 3558
27 Ga0070706_100186303 3300005467 Bacteria 1939
28 Ga0070707_100008237 3300005468 Bacteria 9671
29 Ga0070707_100015792 3300005468 Bacteria 7089
30 Ga0070707_100100958 3300005468 Bacteria 2796
31 Ga0070698_100002730 3300005471 Bacteria 19404
32 Ga0070699_100006455 3300005518 Bacteria 10215
33 Ga0070679_100366557 3300005530 Bacteria 1388
34 Ga0070684_100240747 3300005535 Bacteria 1653
35 Ga0070697_100167490 3300005536 Bacteria 1858
36 Ga0070686_100018593 3300005544 Bacteria 4083
37 Ga0070686_100019062 3300005544 Bacteria 4037
38 Ga0070696_100182214 3300005546 Bacteria 1558
39 Ga0070704_100321679 3300005549 Bacteria 1296
40 Ga0068855_100195943 3300005563 Bacteria 2276
41 Ga0070702_100227251 3300005615 Bacteria 1251
42 Ga0068859_100033055 3300005617 Bacteria 5196
43 Ga0068859_100039332 3300005617 Bacteria 4744
44 Ga0068859_100071476 3300005617 Bacteria 3506
45 Ga0068864_100076276 3300005618 Bacteria 2929
46 Ga0068861_100120354 3300005719 Bacteria 2117
47 Ga0068858_100035061 3300005842 Bacteria 4654
48 Ga0068858_100240643 3300005842 Bacteria 1717
49 Ga0068860_100016933 3300005843 Bacteria 7104
50 Ga0068862_100005234 3300005844 Bacteria 10883
51 Ga0081538_10000081 3300005981 Bacteria 92176
52 Ga0081538_10001520 3300005981 Bacteria 23798
53 Ga0081539_10001434 3300005985 Bacteria 40840
54 Ga0070717_10195553 3300006028 Bacteria 1769
55 Ga0075365_10040410 3300006038 Bacteria 3041
56 Ga0075368_10018868 3300006042 Bacteria 2598
57 Ga0075364_10007077 3300006051 Bacteria 6633
58 Ga0075367_10012274 3300006178 Bacteria 4562
59 Ga0075366_10002019 3300006195 Bacteria 10301
60 Ga0075428_100008459 3300006844 Bacteria 11414
61 Ga0075428_100016681 3300006844 Bacteria 8110
62 Ga0075428_100072657 3300006844 Bacteria 3758
63 Ga0075428_100228255 3300006844 Bacteria 2009
64 Ga0075428_100242576 3300006844 Bacteria 1944
65 Ga0075431_100205873 3300006847 Unclassified 2012
66 Ga0075431_100279156 3300006847 Bacteria 1691
67 Ga0075431_100385938 3300006847 Bacteria 1404
68 Ga0075433_10016778 3300006852 Bacteria 6047
69 Ga0075433_10025316 3300006852 Bacteria 5014
70 Ga0075433_10184135 3300006852 Bacteria 1858
71 Ga0075433_10270731 3300006852 Bacteria 1505
72 Ga0075434_100145310 3300006871 Bacteria 2392
73 Ga0075434_100273046 3300006871 Bacteria 1710
74 Ga0075434_100357019 3300006871 Bacteria 1482
75 Ga0075429_100038546 3300006880 Bacteria 4161
76 Ga0075429_100047021 3300006880 Bacteria 3754
77 Ga0075429_100260914 3300006880 Bacteria 1517
78 Ga0097620_100033055 3300006931 Bacteria 5196
79 Ga0097620_100039331 3300006931 Bacteria 4744
80 Ga0097620_100071479 3300006931 Bacteria 3506
81 Ga0111539_10030145 3300009094 Bacteria 6597
82 Ga0111539_10062303 3300009094 Bacteria 4416
83 Ga0111539_10072363 3300009094 Bacteria 4065
84 Ga0111539_10179343 3300009094 Bacteria 2474
85 Ga0105247_10005791 3300009101 Bacteria 7739
86 Ga0114129_10018027 3300009147 Bacteria 10055
87 Ga0114129_10023837 3300009147 Bacteria 8673
88 Ga0114129_10024342 3300009147 Bacteria 8578
89 Ga0114129_10037344 3300009147 Bacteria 6859
90 Ga0114129_10058114 3300009147 Bacteria 5410
91 Ga0114129_10104882 3300009147 Bacteria 3907
92 Ga0114129_10210171 3300009147 Unclassified 2631
93 Ga0105242_10020837 3300009176 Bacteria 5143
94 Ga0105248_10139845 3300009177 Bacteria 2731
95 Ga0105248_10319663 3300009177 Bacteria 1748
96 Ga0105249_10072581 3300009553 Bacteria 3182
97 Ga0163162_10145781 3300013306 Bacteria 2484
98 Ga0163162_10238327 3300013306 Bacteria 1950
99 Ga0157380_10003747 3300014326 Bacteria 10457
100 Ga0157380_10015258 3300014326 Bacteria 5643
101 Ga0157380_10067084 3300014326 Bacteria 2888
102 Ga0157380_10074106 3300014326 Bacteria 2762
103 Ga0157377_10005212 3300014745 Bacteria 6086
104 Ga0157379_10110545 3300014968 Bacteria 2468
105 Ga0157379_10453827 3300014968 Bacteria 1184
106 Ga0207653_10032450 3300025885 Bacteria 1689
107 Ga0207710_10016004 3300025900 Bacteria 3173
108 Ga0207643_10044213 3300025908 Bacteria 2514
109 Ga0207684_10001262 3300025910 Bacteria 27967
110 Ga0207684_10041292 3300025910 Bacteria 3912
111 Ga0207684_10136086 3300025910 Bacteria 2110
112 Ga0207662_10000550 3300025918 Bacteria 16647
113 Ga0207646_10003939 3300025922 Bacteria 16476
114 Ga0207646_10042288 3300025922 Bacteria 4093
115 Ga0207646_10079606 3300025922 Bacteria 2930
116 Ga0207646_10131457 3300025922 Bacteria 2253
117 Ga0207706_10019847 3300025933 Bacteria 6041
118 Ga0207686_10124160 3300025934 Bacteria 1762
119 Ga0207670_10009111 3300025936 Bacteria 5640
120 Ga0207670_10026056 3300025936 Bacteria 3680
121 Ga0207670_10371778 3300025936 Bacteria 1137
122 Ga0207669_10073164 3300025937 Bacteria 2161
123 Ga0207711_10010812 3300025941 Bacteria 7587
124 Ga0207689_10005207 3300025942 Bacteria 11672
125 Ga0207667_10170761 3300025949 Bacteria 2235
126 Ga0207712_10054335 3300025961 Bacteria 2813
127 Ga0207668_10165290 3300025972 Bacteria 1729
128 Ga0207703_10009143 3300026035 Bacteria 7799
129 Ga0207703_10207568 3300026035 Bacteria 1744
130 Ga0207639_10059703 3300026041 Bacteria 2939
131 Ga0207678_10007115 3300026067 Bacteria 9924
132 Ga0207678_10279365 3300026067 Bacteria 1433
133 Ga0207708_10010606 3300026075 Bacteria 6841
134 Ga0207708_10025560 3300026075 Bacteria 4469
135 Ga0207648_10018395 3300026089 Bacteria 6329
136 Ga0207648_10417408 3300026089 Bacteria 1218
137 Ga0207676_10103422 3300026095 Bacteria 2367
138 Ga0207675_100008715 3300026118 Bacteria 9533
139 Ga0207675_100293309 3300026118 Bacteria 1582
140 Ga0207683_10154480 3300026121 Bacteria 2072
141 Ga0209966_1005950 3300027695 Bacteria 2107
142 Ga0209813_10001942 3300027866 Bacteria 4673
143 Ga0207428_10000106 3300027907 Bacteria 115682
144 Ga0207428_10059318 3300027907 Bacteria 3034
145 Ga0268265_10015884 3300028380 Bacteria 5163
146 Ga0268265_10056978 3300028380 Bacteria 2976
147 Ga0268264_10025105 3300028381 Bacteria 4869
148 Ga0316578_10007863 3300031728 Bacteria 5385
149 Ga0316578_10210962 3300031728 Bacteria 1168
150 Ga0316577_10002897 3300031733 Bacteria 8576
151 Ga0316577_10087025 3300031733 Bacteria 1749
152 Ga0316574_0099771 3300035398 Bacteria 1858
153 Ga0316582_0002664 3300036647 Bacteria 8456
154 Ga0316584_0001524 3300036712 Bacteria 13974
155 Ga0316584_0030438 3300036712 Bacteria 3987
156 Ga0395898_0054273 3300037466 Bacteria 3911
157 Ga0395905_0147789 3300037471 Bacteria 2211
158 Ga0316581_0003700 3300037588 Bacteria 3832
159 Ga0436365_0800783 3300039437 Bacteria 2050
160 Ga0436365_1507693 3300039437 Bacteria 3203
161 Ga0436360_0392507 3300039438 Bacteria 9546
162 Ga0436360_0477493 3300039438 Bacteria 4738
163 Ga0436361_0979217 3300039447 Bacteria 1967
164 Ga0495638_0015473 3300046460 Bacteria 5121
165 Ga0495608_0002040 3300046511 Bacteria 14516
166 Ga0495652_0274346 3300046529 Bacteria 1238
167 Ga0495599_0059357 3300046678 Bacteria 2393
168 Ga0495669_0013693 3300046684 Bacteria 3462
169 Ga0495604_0152203 3300047317 Bacteria 1642
170 Ga0495672_0001522 3300047320 Bacteria 22724
171 Ga0496105_0069559 3300048908 Bacteria 2909
172 Ga0496107_0228876 3300048910 Bacteria 1383
173 Ga0496109_0301090 3300048912 Bacteria 1512
174 Ga0496110_0299407 3300048913 Bacteria 1465
175 Ga0496112_0064552 3300048915 Unclassified 3613
176 Ga0496113_0403467 3300048916 Bacteria 1098
177 Ga0501031_0054563 3300049568 Bacteria 2604
178 Ga0501032_0088810 3300049569 Bacteria 2052
179 Ga0501041_0037311 3300049577 Bacteria 2945
180 Ga0501046_0262103 3300049580 Bacteria 1270
181 Ga0501047_0043440 3300049581 Bacteria 4342
182 Ga0501071_0023052 3300049587 Bacteria 4344
183 Ga0501076_0005613 3300049592 Bacteria 9040
184 Ga0501076_0012140 3300049592 Bacteria 6440
185 Ga0501079_0091586 3300049741 Bacteria 2356
186 Ga0501079_0353812 3300049741 Bacteria 1151
187 Ga0501081_0015308 3300049743 Bacteria 5060
188 Ga0501081_0083210 3300049743 Bacteria 2243
189 Ga0501044_0092111 3300049823 Bacteria 3057
190 Ga0501045_0097249 3300049824 Bacteria 2178
191 nmdc:mga00v17_15371_c1 3300050491 Bacteria 4296
192 nmdc:mga0yw44_8511_c1 3300050492 Bacteria 5118
193 nmdc:mga0k408_3152_c1 3300050493 Bacteria 8743
194 nmdc:mga06z11_12746_c1 3300050494 Bacteria 3666
195 nmdc:mga04h51_3122_c1 3300050495 Bacteria 3997
196 nmdc:mga07m45_114876_c1 3300050496 Bacteria 1552
197 nmdc:mga05p37_11955_c1 3300050507 Bacteria 10352
198 nmdc:mga05p37_1716_c2 3300050507 Bacteria 20419
199 nmdc:mga05p37_270121_c1 3300050507 Bacteria 2032
200 nmdc:mga05p37_29032_c1 3300050507 Bacteria 6749
201 nmdc:mga05p37_358720_c1 3300050507 Bacteria 1714
202 nmdc:mga05p37_49562_c1 3300050507 Bacteria 5165
203 nmdc:mga05p37_79594_c1 3300050507 Bacteria 4035
204 nmdc:mga09592_11883_c1 3300050508 Bacteria 7083
205 nmdc:mga09592_209567_c1 3300050508 Bacteria 1688
206 nmdc:mga09592_260872_c1 3300050508 Bacteria 1502
207 nmdc:mga09592_36588_c1 3300050508 Bacteria 4112
208 nmdc:mga09592_4667_c1 3300050508 Bacteria 11093
209 nmdc:mga06r32_422980_c1 3300050510 Bacteria 1313
210 nmdc:mga06r32_435880_c1 3300050510 Bacteria 1291
211 nmdc:mga06r32_8172_c1 3300050510 Bacteria 9415
212 nmdc:mga08y16_234708_c1 3300050511 Bacteria 1897
213 nmdc:mga08y16_24604_c1 3300050511 Bacteria 6355
214 nmdc:mga08y16_840_c1 3300050511 Bacteria 29466
215 nmdc:mga0n895_180212_c1 3300050512 Bacteria 2144
216 nmdc:mga0n895_248236_c1 3300050512 Bacteria 1806
217 nmdc:mga0n895_61462_c1 3300050512 Bacteria 3708
218 nmdc:mga0a205_173472_c1 3300050515 Bacteria 2052
219 nmdc:mga0a205_252788_c1 3300050515 Bacteria 1641
220 nmdc:mga0a205_49836_c1 3300050515 Bacteria 4043
221 nmdc:mga0a205_69182_c1 3300050515 Bacteria 3409
222 Ga0495601_0000563 3300053077 Bacteria 19656
223 Ga0495601_0229991 3300053077 Bacteria 1211
224 Ga0495595_0036154 3300053084 Bacteria 2240
225 Ga0501082_0114648 3300060353 Bacteria 2334
226 Ga0530510_0112612 3300061734 Bacteria 1994
227 Ga0530510_0184197 3300061734 Bacteria 1549
228 2673168494 2671180531 Bacteria 9045424
229 Ga0075431_100049540
230 JGI25407J50210_10000028
231 Ga0058860_12211021
232 Ga0070690_100007734
233 Ga0068869_100009803
234 Ga0070689_100016717
235 Ga0070689_100093269
236 Ga0070687_100012262
237 Ga0070668_100160126
238 Ga0070674_100018637
239 Ga0070667_100203373
240 Ga0070703_10027885
241 Ga0070713_100056865
242 Ga0070701_10026186
243 Ga0070705_100052626
244 Ga0070700_100003034
245 Ga0070700_100019729
246 Ga0070694_100006861
247 Ga0070694_100095435
248 Ga0070708_100109182
249 Ga0070663_100071277
250 Ga0068867_100030410
251 Ga0070685_10035040
252 Ga0070685_10053200
253 Ga0070706_100034227
254 Ga0070706_100058474
255 Ga0070706_100186303
256 Ga0070707_100008237
257 Ga0070707_100015792
258 Ga0070707_100100958
259 Ga0070698_100002730
260 Ga0070699_100006455
261 Ga0070679_100366557
262 Ga0070684_100240747
263 Ga0070697_100167490
264 Ga0070686_100018593
265 Ga0070686_100019062
266 Ga0070696_100182214
267 Ga0070704_100321679
268 Ga0068855_100195943
269 Ga0070702_100227251
270 Ga0068859_100033055
271 Ga0068859_100039332
272 Ga0068859_100071476
273 Ga0068864_100076276
274 Ga0068861_100120354
275 Ga0068858_100035061
276 Ga0068858_100240643
277 Ga0068860_100016933
278 Ga0068862_100005234
279 Ga0081538_10000081
280 Ga0081538_10001520
281 Ga0081539_10001434
282 Ga0070717_10195553
283 Ga0075365_10040410
284 Ga0075368_10018868
285 Ga0075364_10007077
286 Ga0075367_10012274
287 Ga0075366_10002019
288 Ga0075428_100008459
289 Ga0075428_100016681
290 Ga0075428_100072657
291 Ga0075428_100228255
292 Ga0075428_100242576
293 Ga0075431_100205873
294 Ga0075431_100279156
295 Ga0075431_100385938
296 Ga0075433_10016778
297 Ga0075433_10025316
298 Ga0075433_10184135
299 Ga0075433_10270731
300 Ga0075434_100145310
301 Ga0075434_100273046
302 Ga0075434_100357019
303 Ga0075429_100038546
304 Ga0075429_100047021
305 Ga0075429_100260914
306 Ga0097620_100033055
307 Ga0097620_100039331
308 Ga0097620_100071479
309 Ga0111539_10030145
310 Ga0111539_10062303
311 Ga0111539_10072363
312 Ga0111539_10179343
313 Ga0105247_10005791
314 Ga0114129_10018027
315 Ga0114129_10023837
316 Ga0114129_10024342
317 Ga0114129_10037344
318 Ga0114129_10058114
319 Ga0114129_10104882
320 Ga0114129_10210171
321 Ga0105242_10020837
322 Ga0105248_10139845
323 Ga0105248_10319663
324 Ga0105249_10072581
325 Ga0163162_10145781
326 Ga0163162_10238327
327 Ga0157380_10003747
328 Ga0157380_10015258
329 Ga0157380_10067084
330 Ga0157380_10074106
331 Ga0157377_10005212
332 Ga0157379_10110545
333 Ga0157379_10453827
334 Ga0207653_10032450
335 Ga0207710_10016004
336 Ga0207643_10044213
337 Ga0207684_10001262
338 Ga0207684_10041292
339 Ga0207684_10136086
340 Ga0207662_10000550
341 Ga0207646_10003939
342 Ga0207646_10042288
343 Ga0207646_10079606
344 Ga0207646_10131457
345 Ga0207706_10019847
346 Ga0207686_10124160
347 Ga0207670_10009111
348 Ga0207670_10026056
349 Ga0207670_10371778
350 Ga0207669_10073164
351 Ga0207711_10010812
352 Ga0207689_10005207
353 Ga0207667_10170761
354 Ga0207712_10054335
355 Ga0207668_10165290
356 Ga0207703_10009143
357 Ga0207703_10207568
358 Ga0207639_10059703
359 Ga0207678_10007115
360 Ga0207678_10279365
361 Ga0207708_10010606
362 Ga0207708_10025560
363 Ga0207648_10018395
364 Ga0207648_10417408
365 Ga0207676_10103422
366 Ga0207675_100008715
367 Ga0207675_100293309
368 Ga0207683_10154480
369 Ga0209966_1005950
370 Ga0209813_10001942
371 Ga0207428_10000106
372 Ga0207428_10059318
373 Ga0268265_10015884
374 Ga0268265_10056978
375 Ga0268264_10025105
376 Ga0316578_10007863
377 Ga0316578_10210962
378 Ga0316577_10002897
379 Ga0316577_10087025
380 Ga0316574_0099771
381 Ga0316582_0002664
382 Ga0316584_0001524
383 Ga0316584_0030438
384 Ga0395898_0054273
385 Ga0395905_0147789
386 Ga0316581_0003700
387 Ga0436365_0800783
388 Ga0436365_1507693
389 Ga0436360_0392507
390 Ga0436360_0477493
391 Ga0436361_0979217
392 Ga0495638_0015473
393 Ga0495608_0002040
394 Ga0495652_0274346
395 Ga0495599_0059357
396 Ga0495669_0013693
397 Ga0495604_0152203
398 Ga0495672_0001522
399 Ga0496105_0069559
400 Ga0496107_0228876
401 Ga0496109_0301090
402 Ga0496110_0299407
403 Ga0496112_0064552
404 Ga0496113_0403467
405 Ga0501031_0054563
406 Ga0501032_0088810
407 Ga0501041_0037311
408 Ga0501046_0262103
409 Ga0501047_0043440
410 Ga0501071_0023052
411 Ga0501076_0005613
412 Ga0501076_0012140
413 Ga0501079_0091586
414 Ga0501079_0353812
415 Ga0501081_0015308
416 Ga0501081_0083210
417 Ga0501044_0092111
418 Ga0501045_0097249
419 nmdc:mga00v17_15371_c1
420 nmdc:mga0yw44_8511_c1
421 nmdc:mga0k408_3152_c1
422 nmdc:mga06z11_12746_c1
423 nmdc:mga04h51_3122_c1
424 nmdc:mga07m45_114876_c1
425 nmdc:mga05p37_11955_c1
426 nmdc:mga05p37_1716_c2
427 nmdc:mga05p37_270121_c1
428 nmdc:mga05p37_29032_c1
429 nmdc:mga05p37_358720_c1
430 nmdc:mga05p37_49562_c1
431 nmdc:mga05p37_79594_c1
432 nmdc:mga09592_11883_c1
433 nmdc:mga09592_209567_c1
434 nmdc:mga09592_260872_c1
435 nmdc:mga09592_36588_c1
436 nmdc:mga09592_4667_c1
437 nmdc:mga06r32_422980_c1
438 nmdc:mga06r32_435880_c1
439 nmdc:mga06r32_8172_c1
440 nmdc:mga08y16_234708_c1
441 nmdc:mga08y16_24604_c1
442 nmdc:mga08y16_840_c1
443 nmdc:mga0n895_180212_c1
444 nmdc:mga0n895_248236_c1
445 nmdc:mga0n895_61462_c1
446 nmdc:mga0a205_173472_c1
447 nmdc:mga0a205_252788_c1
448 nmdc:mga0a205_49836_c1
449 nmdc:mga0a205_69182_c1
450 Ga0495601_0000563
451 Ga0495601_0229991
452 Ga0495595_0036154
453 Ga0501082_0114648
454 Ga0530510_0112612
455 Ga0530510_0184197
456 2673168494

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01409

tRNA-synt_2d

tRNA synthetases class II core domain (F)

70

369

0.96

PF02912

Phe_tRNA-synt_N

Aminoacyl tRNA synthetase class II, N-terminal domain

20

69

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4p75-assembly1.cif.gz_C phers in complex with compound 4a 0.8849 80 328
4p73-assembly1.cif.gz_C phers in complex with compound 1a 0.8806 80 328
4p75-assembly1.cif.gz_C phers in complex with compound 4a 0.8775 80 328
4p73-assembly1.cif.gz_D phers in complex with compound 1a 0.8731 78 328
4p75-assembly1.cif.gz_D phers in complex with compound 4a 0.87 75 328
ID Description Score Start End Superfamily
4p73C01 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9343 96 328 3.30.930.10
4p73C01 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9261 96 328 3.30.930.10
3l4gO01 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.8761 99 315 3.30.930.10
2rhsC00 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.8646 72 328 3.30.930.10
3vqxB02 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.8342 96 315 3.30.930.10
ID Description Score Start End GO Terms
AF-A0A5D0WGN2-F1-model_v4 deleted 0.9731 180 311
AF-G8B2P5-F1-model_v4 phenylalanine--tRNA ligase (EC 6.1.1.20) 0.9703 112 271 GO:0000049
GO:0004826
GO:0005524
GO:0005737
GO:0006432
GO:0016740
AF-A0A2W6NQW7-F1-model_v4 phenylalanine--tRNA ligase (EC 6.1.1.20) 0.9697 105 218 GO:0000049
GO:0004826
GO:0005524
GO:0005737
GO:0006432
AF-A0A6N0D3B0-F1-model_v4 phenylalanine--tRNA ligase (EC 6.1.1.20) 0.9672 175 282 GO:0000049
GO:0004826
GO:0005524
GO:0005737
GO:0006432
GO:0016740
AF-A6PXM8-F1-model_v4 Phenylalanyl-tRNA synthase alpha subunit 0.9664 164 294 GO:0000049
GO:0004826
GO:0005524
GO:0005737
GO:0006432
GO:0016740

Map