F340704

General Info

Members Datasets Scaffolds Average Seq Length
228 137 228 180

Family's Representative Sequence

Representative Sequence 3300005436|Ga0070713_100358202|Ga0070713_1003582022
Length 196
Sequence MSTAVEDIHDEHEEAASIEEQPVLTGLLAEFRDVNTVVAAAAKVRREGYRRWDVHTPFPIHGIDSVMGTRPTVLPWIVLAAGLFGAAGGIWLQWYVNAYDYQFPISGKPYWSLPANIPVAFECTILCAALTTVFAMLALDRLPMFYNPLFKSERFRRATDDRFFIAIDAGDPEFEEQATEELLRSAGAAAIERIED

Samples

Sample ID Description Type Environment
1 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
36 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
37 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
80 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
81 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
82 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
83 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
84 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
85 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
86 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
87 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
88 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
89 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
90 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
91 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
92 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
93 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
94 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
95 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
96 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
97 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
98 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
99 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
100 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
101 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
102 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
103 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
104 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
105 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
106 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
107 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
108 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
109 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
110 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
111 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
112 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
113 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
114 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
115 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
116 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
117 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
118 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
119 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
120 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
121 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
122 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
123 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
124 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
125 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
126 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
127 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
128 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
129 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
130 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
131 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
134 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
135 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
136 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
137 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.32
Rhizosphere 98.68
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065712_10120732 3300005290 Bacteria 1675
2 Ga0070690_100105467 3300005330 Bacteria 1873
3 Ga0068869_100452659 3300005334 Unclassified 1064
4 Ga0070666_10081493 3300005335 Bacteria 2212
5 Ga0070689_100192937 3300005340 Bacteria 1659
6 Ga0070669_100313055 3300005353 Unclassified 1266
7 Ga0070675_100666210 3300005354 Unclassified 946
8 Ga0070688_100143756 3300005365 Unclassified 1623
9 Ga0070688_100166370 3300005365 Bacteria 1518
10 Ga0070688_100622767 3300005365 Unclassified 828
11 Ga0070714_100033320 3300005435 Bacteria 4306
12 Ga0070713_100233363 3300005436 Bacteria 1673
13 Ga0070713_100358202 3300005436 Bacteria 1355
14 Ga0070713_100428559 3300005436 Unclassified 1239
15 Ga0070701_10083940 3300005438 Bacteria 1731
16 Ga0070700_100347783 3300005441 Bacteria 1098
17 Ga0070681_10306282 3300005458 Bacteria 1498
18 Ga0070681_10482678 3300005458 Bacteria 1152
19 Ga0068867_100254117 3300005459 Unclassified 1430
20 Ga0068867_100613997 3300005459 Bacteria 950
21 Ga0070685_10136384 3300005466 Bacteria 1540
22 Ga0070707_100981601 3300005468 Unclassified 810
23 Ga0070699_100940403 3300005518 Unclassified 792
24 Ga0070679_100351673 3300005530 Bacteria 1421
25 Ga0070679_101238766 3300005530 Unclassified 691
26 Ga0068853_101106814 3300005539 Unclassified 764
27 Ga0070672_100249722 3300005543 Bacteria 1494
28 Ga0070686_100001543 3300005544 Bacteria 12942
29 Ga0070686_100180668 3300005544 Bacteria 1499
30 Ga0070693_100360739 3300005547 Unclassified 997
31 Ga0068855_100037289 3300005563 Bacteria 5782
32 Ga0068855_100264812 3300005563 Bacteria 1913
33 Ga0068855_100531709 3300005563 Bacteria 1275
34 Ga0068855_100625949 3300005563 Bacteria 1158
35 Ga0068857_100291434 3300005577 Unclassified 1503
36 Ga0068856_100046738 3300005614 Bacteria 4263
37 Ga0068856_100465233 3300005614 Bacteria 1285
38 Ga0068856_100503934 3300005614 Unclassified 1232
39 Ga0068859_100355757 3300005617 Bacteria 1559
40 Ga0068859_100441069 3300005617 Bacteria 1398
41 Ga0068859_100972974 3300005617 Bacteria 931
42 Ga0068859_101564466 3300005617 Bacteria 728
43 Ga0068859_101641153 3300005617 Bacteria 710
44 Ga0068864_101576816 3300005618 Unclassified 660
45 Ga0068864_101732163 3300005618 Unclassified 630
46 Ga0068861_100246867 3300005719 Bacteria 1521
47 Ga0068861_101174437 3300005719 Unclassified 741
48 Ga0068861_101331148 3300005719 Unclassified 699
49 Ga0068860_100437522 3300005843 Bacteria 1299
50 Ga0068860_100832207 3300005843 Bacteria 937
51 Ga0068862_100077253 3300005844 Bacteria 2883
52 Ga0097621_100252702 3300006237 Bacteria 1544
53 Ga0097621_100285737 3300006237 Unclassified 1453
54 Ga0068871_100179713 3300006358 Bacteria 1818
55 Ga0075430_100080094 3300006846 Bacteria 2736
56 Ga0075431_100035518 3300006847 Bacteria 5132
57 Ga0075433_10262877 3300006852 Bacteria 1530
58 Ga0075429_100573080 3300006880 Bacteria 989
59 Ga0075436_100326210 3300006914 Bacteria 1103
60 Ga0097620_100355762 3300006931 Bacteria 1559
61 Ga0097620_100441110 3300006931 Bacteria 1398
62 Ga0097620_100972961 3300006931 Bacteria 931
63 Ga0097620_101565188 3300006931 Bacteria 728
64 Ga0097620_101641213 3300006931 Bacteria 710
65 Ga0099794_10065873 3300007265 Bacteria 1767
66 Ga0099794_10193719 3300007265 Bacteria 1040
67 Ga0105240_10010216 3300009093 Bacteria 13211
68 Ga0105240_10032224 3300009093 Bacteria 6788
69 Ga0105240_10133589 3300009093 Bacteria 2973
70 Ga0105240_10808004 3300009093 Unclassified 1015
71 Ga0105240_11584052 3300009093 Unclassified 686
72 Ga0105245_11157394 3300009098 Unclassified 821
73 Ga0105245_11749117 3300009098 Bacteria 674
74 Ga0105243_10319886 3300009148 Bacteria 1413
75 Ga0105241_10251372 3300009174 Bacteria 1499
76 Ga0105242_10423324 3300009176 Bacteria 1248
77 Ga0105248_10348842 3300009177 Bacteria 1666
78 Ga0105248_10798648 3300009177 Bacteria 1065
79 Ga0105248_11804421 3300009177 Bacteria 694
80 Ga0105238_10245676 3300009551 Bacteria 1767
81 Ga0105249_10079287 3300009553 Bacteria 3048
82 Ga0157370_10073734 3300013104 Bacteria 3220
83 Ga0157369_10494096 3300013105 Bacteria 1266
84 Ga0157374_10006245 3300013296 Bacteria 10106
85 Ga0157374_10690874 3300013296 Bacteria 1033
86 Ga0157378_10044421 3300013297 Bacteria 3946
87 Ga0157378_10255228 3300013297 Bacteria 1680
88 Ga0157378_10700061 3300013297 Unclassified 1032
89 Ga0157378_10826886 3300013297 Bacteria 953
90 Ga0157372_10029097 3300013307 Bacteria 6029
91 Ga0157372_10370072 3300013307 Bacteria 1670
92 Ga0157372_10524497 3300013307 Bacteria 1381
93 Ga0157372_10979953 3300013307 Bacteria 979
94 Ga0157375_10000025 3300013308 Bacteria 224384
95 Ga0157375_10344116 3300013308 Bacteria 1657
96 Ga0157375_10867857 3300013308 Bacteria 1048
97 Ga0163163_10000027 3300014325 Bacteria 176970
98 Ga0163163_10078672 3300014325 Bacteria 3294
99 Ga0163163_10623787 3300014325 Bacteria 1142
100 Ga0163163_11228958 3300014325 Unclassified 812
101 Ga0157379_10292244 3300014968 Bacteria 1484
102 Ga0157376_10443693 3300014969 Bacteria 1264
103 Ga0207680_10066903 3300025903 Bacteria 2212
104 Ga0207685_10429764 3300025905 Unclassified 683
105 Ga0207695_10000211 3300025913 Bacteria 156467
106 Ga0207657_10322170 3300025919 Bacteria 1222
107 Ga0207646_10931950 3300025922 Unclassified 769
108 Ga0207694_10055955 3300025924 Bacteria 3063
109 Ga0207659_11282565 3300025926 Unclassified 629
110 Ga0207664_10021267 3300025929 Bacteria 4821
111 Ga0207670_10584534 3300025936 Unclassified 916
112 Ga0207691_10565866 3300025940 Bacteria 963
113 Ga0207711_10100883 3300025941 Bacteria 2554
114 Ga0207661_10056213 3300025944 Bacteria 3159
115 Ga0207661_10813866 3300025944 Unclassified 860
116 Ga0207667_10048583 3300025949 Bacteria 4486
117 Ga0207677_10779788 3300026023 Unclassified 854
118 Ga0207703_10631252 3300026035 Bacteria 1015
119 Ga0207641_10930785 3300026088 Unclassified 864
120 Ga0207641_11400466 3300026088 Bacteria 700
121 Ga0207648_10159791 3300026089 Bacteria 1990
122 Ga0207648_10632790 3300026089 Unclassified 988
123 Ga0207676_10156589 3300026095 Bacteria 1969
124 Ga0207676_10390501 3300026095 Bacteria 1298
125 Ga0207674_10020447 3300026116 Bacteria 7153
126 Ga0207674_10023337 3300026116 Bacteria 6629
127 Ga0207674_10158973 3300026116 Bacteria 2215
128 Ga0207675_101139959 3300026118 Unclassified 800
129 Ga0268265_10270407 3300028380 Unclassified 1516
130 Ga0268264_10190379 3300028381 Bacteria 1870
131 Ga0265319_1070650 3300028563 Unclassified 1120
132 Ga0265319_1105030 3300028563 Bacteria 885
133 Ga0265334_10052479 3300028573 Bacteria 1560
134 Ga0265338_10002556 3300028800 Bacteria 26927
135 Ga0265338_10008919 3300028800 Bacteria 12075
136 Ga0265338_10018261 3300028800 Bacteria 7513
137 Ga0265338_10044451 3300028800 Bacteria 4101
138 Ga0265338_10058341 3300028800 Bacteria 3407
139 Ga0265338_10064775 3300028800 Bacteria 3175
140 Ga0265338_10335520 3300028800 Unclassified 1091
141 Ga0265324_10000953 3300029957 Bacteria 18071
142 Ga0265324_10017669 3300029957 Bacteria 2593
143 Ga0265324_10043401 3300029957 Unclassified 1552
144 Ga0265324_10086364 3300029957 Unclassified 1067
145 Ga0265320_10239194 3300031240 Bacteria 806
146 Ga0265339_10039350 3300031249 Unclassified 2632
147 Ga0265327_10024658 3300031251 Bacteria 3525
148 Ga0265316_10072554 3300031344 Bacteria 2652
149 Ga0373926_0020874 3300035083 Bacteria 2265
150 Ga0373945_0027762 3300035116 Bacteria 1979
151 Ga0373954_0020406 3300035118 Bacteria 2997
152 Ga0373956_0027727 3300035119 Bacteria 2461
153 Ga0373956_0082811 3300035119 Bacteria 1474
154 Ga0373943_0606013 3300035170 Unclassified 645
155 Ga0373924_0194925 3300035410 Bacteria 893
156 Ga0373931_0151789 3300035691 Unclassified 1351
157 Ga0373935_0080637 3300035692 Bacteria 2114
158 Ga0373933_0970707 3300035724 Unclassified 560
159 Ga0373947_0010346 3300035725 Bacteria 5353
160 Ga0373947_0573393 3300035725 Bacteria 769
161 Ga0373937_0130630 3300036401 Bacteria 2346
162 Ga0373925_0006750 3300037068 Bacteria 8415
163 Ga0373925_0496512 3300037068 Bacteria 1002
164 Ga0451577_0008012 3300042876 Bacteria 10313
165 Ga0451577_0019928 3300042876 Bacteria 6160
166 Ga0451577_0182763 3300042876 Bacteria 1891
167 Ga0451577_0643371 3300042876 Bacteria 962
168 Ga0451577_1114170 3300042876 Bacteria 706
169 Ga0453684_0002669 3300044712 Bacteria 42512
170 Ga0453684_0014768 3300044712 Bacteria 12446
171 Ga0466971_0422208 3300044719 Bacteria 652
172 Ga0451576_0039071 3300045051 Bacteria 5023
173 Ga0451576_0046135 3300045051 Bacteria 4589
174 Ga0451576_0177754 3300045051 Bacteria 2222
175 Ga0451576_0202749 3300045051 Bacteria 2072
176 Ga0451576_0979443 3300045051 Bacteria 886
177 Ga0451576_1031585 3300045051 Bacteria 862
178 Ga0451576_1445084 3300045051 Unclassified 715
179 Ga0495592_0041941 3300046454 Bacteria 3428
180 Ga0495592_0275488 3300046454 Bacteria 1102
181 Ga0495641_0015839 3300046461 Bacteria 3998
182 Ga0495582_0166815 3300046473 Bacteria 1253
183 Ga0495662_0067987 3300046476 Bacteria 1725
184 Ga0495662_0311735 3300046476 Bacteria 774
185 Ga0495664_0157546 3300046477 Bacteria 1378
186 Ga0495628_0159007 3300046516 Bacteria 1718
187 Ga0495628_0210244 3300046516 Unclassified 1464
188 Ga0495630_0000051 3300046517 Bacteria 95456
189 Ga0495630_0044394 3300046517 Bacteria 3322
190 Ga0495630_0099073 3300046517 Bacteria 2205
191 Ga0495630_0199420 3300046517 Bacteria 1527
192 Ga0495630_0283726 3300046517 Unclassified 1265
193 Ga0495666_0005531 3300046526 Bacteria 6363
194 Ga0495666_0242339 3300046526 Unclassified 822
195 Ga0495652_0057439 3300046529 Bacteria 3300
196 Ga0495640_0097332 3300046533 Bacteria 1935
197 Ga0495586_0000041 3300046535 Bacteria 78799
198 Ga0495586_0009772 3300046535 Bacteria 5108
199 Ga0495645_0034171 3300046543 Bacteria 3711
200 Ga0495645_0130954 3300046543 Bacteria 1758
201 Ga0495634_0013228 3300046642 Bacteria 5966
202 Ga0495635_0206224 3300046663 Unclassified 1332
203 Ga0495599_0048049 3300046678 Bacteria 2675
204 Ga0495647_0026199 3300046681 Bacteria 2134
205 Ga0495658_0188574 3300046683 Bacteria 1281
206 Ga0495613_0003030 3300046689 Bacteria 12567
207 Ga0495613_0069241 3300046689 Bacteria 2573
208 Ga0495613_0118072 3300046689 Bacteria 1907
209 Ga0495613_0696021 3300046689 Bacteria 669
210 Ga0495674_0000087 3300047319 Bacteria 65109
211 Ga0495674_0046281 3300047319 Bacteria 3862
212 Ga0495676_0008280 3300047321 Bacteria 9538
213 Ga0495676_0050319 3300047321 Bacteria 3343
214 Ga0495680_0397004 3300047322 Bacteria 953
215 Ga0495675_0487097 3300047444 Unclassified 709
216 Ga0495684_0125770 3300047471 Unclassified 1929
217 Ga0495593_0272332 3300047673 Bacteria 847
218 Ga0495614_0035150 3300048089 Bacteria 2154
219 Ga0496106_0242776 3300048909 Bacteria 1439
220 Ga0496107_0048249 3300048910 Bacteria 3067
221 Ga0496115_0004467 3300048918 Bacteria 10133
222 Ga0501033_0255854 3300049570 Bacteria 1240
223 Ga0501043_0072129 3300049579 Bacteria 2713
224 Ga0501047_0418255 3300049581 Bacteria 1172
225 nmdc:mga09592_398076_c1 3300050508 Unclassified 1190
226 nmdc:mga0qj67_174517_c1 3300050509 Bacteria 1745
227 nmdc:mga06r32_89543_c1 3300050510 Bacteria 3005
228 nmdc:mga08x19_231278_c1 3300050514 Bacteria 1272

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300042876 Ga0451577_0008012 Ga0451577_0008012_4827_5366 165
2 3300044712 Ga0453684_0014768 Ga0453684_0014768_1824_2363 165
3 3300042876 Ga0451577_1114170 Ga0451577_1114170_62_571 169
4 3300044712 Ga0453684_0002669 Ga0453684_0002669_39059_39568 169
5 3300005614 Ga0068856_100465233 Ga0068856_1004652332 170
6 3300026116 Ga0207674_10023337 Ga0207674_100233373 170
7 3300035724 Ga0373933_0970707 Ga0373933_0970707_21_533 170
8 3300036401 Ga0373937_0130630 Ga0373937_0130630_697_1209 170
9 3300047322 Ga0495680_0397004 Ga0495680_0397004_92_604 170
10 3300035691 Ga0373931_0151789 Ga0373931_0151789_637_1152 171
11 3300009098 Ga0105245_11749117 Ga0105245_117491171 172
12 3300005617 Ga0068859_100972974 Ga0068859_1009729742 176
13 3300006931 Ga0097620_100972961 Ga0097620_1009729612 176
14 3300006846 Ga0075430_100080094 Ga0075430_1000800943 177
15 3300006847 Ga0075431_100035518 Ga0075431_1000355182 177
16 3300028800 Ga0265338_10018261 Ga0265338_100182613 177
17 3300029957 Ga0265324_10043401 Ga0265324_100434012 177
18 3300031249 Ga0265339_10039350 Ga0265339_100393504 177
19 3300050508 nmdc:mga09592_398076_c1 nmdc:mga09592_398076_c1_202_738 177
20 3300050509 nmdc:mga0qj67_174517_c1 nmdc:mga0qj67_174517_c1_561_1097 177
21 3300050510 nmdc:mga06r32_89543_c1 nmdc:mga06r32_89543_c1_52_588 177
22 3300009177 Ga0105248_11804421 Ga0105248_118044211 178
23 3300013297 Ga0157378_10044421 Ga0157378_100444214 178
24 3300028800 Ga0265338_10335520 Ga0265338_103355202 178
25 3300005330 Ga0070690_100105467 Ga0070690_1001054672 179
26 3300005334 Ga0068869_100452659 Ga0068869_1004526592 179
27 3300005335 Ga0070666_10081493 Ga0070666_100814933 179
28 3300005340 Ga0070689_100192937 Ga0070689_1001929372 179
29 3300005353 Ga0070669_100313055 Ga0070669_1003130552 179
30 3300005365 Ga0070688_100166370 Ga0070688_1001663702 179
31 3300005365 Ga0070688_100622767 Ga0070688_1006227672 179
32 3300005435 Ga0070714_100033320 Ga0070714_1000333203 179
33 3300005436 Ga0070713_100233363 Ga0070713_1002333633 179
34 3300005436 Ga0070713_100358202 Ga0070713_1003582022 179
35 3300005436 Ga0070713_100428559 Ga0070713_1004285591 179
36 3300005438 Ga0070701_10083940 Ga0070701_100839402 179
37 3300005441 Ga0070700_100347783 Ga0070700_1003477832 179
38 3300005458 Ga0070681_10306282 Ga0070681_103062821 179
39 3300005458 Ga0070681_10482678 Ga0070681_104826782 179
40 3300005459 Ga0068867_100254117 Ga0068867_1002541171 179
41 3300005459 Ga0068867_100613997 Ga0068867_1006139971 179
42 3300005468 Ga0070707_100981601 Ga0070707_1009816011 179
43 3300005518 Ga0070699_100940403 Ga0070699_1009404031 179
44 3300005530 Ga0070679_100351673 Ga0070679_1003516732 179
45 3300005530 Ga0070679_101238766 Ga0070679_1012387662 179
46 3300005539 Ga0068853_101106814 Ga0068853_1011068141 179
47 3300005543 Ga0070672_100249722 Ga0070672_1002497223 179
48 3300005544 Ga0070686_100001543 Ga0070686_1000015432 179
49 3300005544 Ga0070686_100180668 Ga0070686_1001806682 179
50 3300005547 Ga0070693_100360739 Ga0070693_1003607392 179
51 3300005563 Ga0068855_100037289 Ga0068855_1000372894 179
52 3300005563 Ga0068855_100264812 Ga0068855_1002648122 179
53 3300005563 Ga0068855_100531709 Ga0068855_1005317092 179
54 3300005563 Ga0068855_100625949 Ga0068855_1006259492 179
55 3300005577 Ga0068857_100291434 Ga0068857_1002914343 179
56 3300005614 Ga0068856_100046738 Ga0068856_1000467383 179
57 3300005614 Ga0068856_100503934 Ga0068856_1005039342 179
58 3300005617 Ga0068859_100441069 Ga0068859_1004410692 179
59 3300005617 Ga0068859_101641153 Ga0068859_1016411531 179
60 3300005618 Ga0068864_101576816 Ga0068864_1015768162 179
61 3300005618 Ga0068864_101732163 Ga0068864_1017321631 179
62 3300005719 Ga0068861_100246867 Ga0068861_1002468672 179
63 3300005719 Ga0068861_101174437 Ga0068861_1011744372 179
64 3300005719 Ga0068861_101331148 Ga0068861_1013311481 179
65 3300005843 Ga0068860_100437522 Ga0068860_1004375222 179
66 3300005843 Ga0068860_100832207 Ga0068860_1008322072 179
67 3300005844 Ga0068862_100077253 Ga0068862_1000772532 179
68 3300006237 Ga0097621_100252702 Ga0097621_1002527022 179
69 3300006237 Ga0097621_100285737 Ga0097621_1002857372 179
70 3300006358 Ga0068871_100179713 Ga0068871_1001797133 179
71 3300006852 Ga0075433_10262877 Ga0075433_102628772 179
72 3300006914 Ga0075436_100326210 Ga0075436_1003262102 179
73 3300006931 Ga0097620_100441110 Ga0097620_1004411102 179
74 3300006931 Ga0097620_101641213 Ga0097620_1016412131 179
75 3300007265 Ga0099794_10065873 Ga0099794_100658732 179
76 3300007265 Ga0099794_10193719 Ga0099794_101937192 179
77 3300009093 Ga0105240_10010216 Ga0105240_100102165 179
78 3300009093 Ga0105240_10032224 Ga0105240_100322244 179
79 3300009093 Ga0105240_10133589 Ga0105240_101335892 179
80 3300009093 Ga0105240_10808004 Ga0105240_108080042 179
81 3300009093 Ga0105240_11584052 Ga0105240_115840522 179
82 3300009098 Ga0105245_11157394 Ga0105245_111573942 179
83 3300009148 Ga0105243_10319886 Ga0105243_103198863 179
84 3300009174 Ga0105241_10251372 Ga0105241_102513722 179
85 3300009176 Ga0105242_10423324 Ga0105242_104233242 179
86 3300009177 Ga0105248_10348842 Ga0105248_103488422 179
87 3300009177 Ga0105248_10798648 Ga0105248_107986481 179
88 3300009551 Ga0105238_10245676 Ga0105238_102456762 179
89 3300009553 Ga0105249_10079287 Ga0105249_100792874 179
90 3300013104 Ga0157370_10073734 Ga0157370_100737343 179
91 3300013105 Ga0157369_10494096 Ga0157369_104940962 179
92 3300013296 Ga0157374_10006245 Ga0157374_100062458 179
93 3300013296 Ga0157374_10690874 Ga0157374_106908742 179
94 3300013297 Ga0157378_10255228 Ga0157378_102552282 179
95 3300013297 Ga0157378_10700061 Ga0157378_107000612 179
96 3300013297 Ga0157378_10826886 Ga0157378_108268862 179
97 3300013307 Ga0157372_10029097 Ga0157372_100290976 179
98 3300013307 Ga0157372_10370072 Ga0157372_103700722 179
99 3300013307 Ga0157372_10524497 Ga0157372_105244972 179
100 3300013307 Ga0157372_10979953 Ga0157372_109799532 179
101 3300013308 Ga0157375_10000025 Ga0157375_1000002583 179
102 3300013308 Ga0157375_10344116 Ga0157375_103441162 179
103 3300013308 Ga0157375_10867857 Ga0157375_108678571 179
104 3300014325 Ga0163163_10000027 Ga0163163_10000027118 179
105 3300014325 Ga0163163_10078672 Ga0163163_100786724 179
106 3300014325 Ga0163163_11228958 Ga0163163_112289581 179
107 3300014969 Ga0157376_10443693 Ga0157376_104436932 179
108 3300025903 Ga0207680_10066903 Ga0207680_100669032 179
109 3300025905 Ga0207685_10429764 Ga0207685_104297642 179
110 3300025913 Ga0207695_10000211 Ga0207695_1000021158 179
111 3300025919 Ga0207657_10322170 Ga0207657_103221702 179
112 3300025922 Ga0207646_10931950 Ga0207646_109319502 179
113 3300025924 Ga0207694_10055955 Ga0207694_100559552 179
114 3300025929 Ga0207664_10021267 Ga0207664_100212673 179
115 3300025936 Ga0207670_10584534 Ga0207670_105845341 179
116 3300025940 Ga0207691_10565866 Ga0207691_105658661 179
117 3300025941 Ga0207711_10100883 Ga0207711_101008832 179
118 3300025944 Ga0207661_10056213 Ga0207661_100562133 179
119 3300025944 Ga0207661_10813866 Ga0207661_108138662 179
120 3300025949 Ga0207667_10048583 Ga0207667_100485835 179
121 3300026023 Ga0207677_10779788 Ga0207677_107797881 179
122 3300026035 Ga0207703_10631252 Ga0207703_106312521 179
123 3300026088 Ga0207641_10930785 Ga0207641_109307852 179
124 3300026089 Ga0207648_10159791 Ga0207648_101597913 179
125 3300026089 Ga0207648_10632790 Ga0207648_106327902 179
126 3300026095 Ga0207676_10156589 Ga0207676_101565892 179
127 3300026116 Ga0207674_10020447 Ga0207674_100204474 179
128 3300026118 Ga0207675_101139959 Ga0207675_1011399592 179
129 3300028380 Ga0268265_10270407 Ga0268265_102704073 179
130 3300028381 Ga0268264_10190379 Ga0268264_101903793 179
131 3300028563 Ga0265319_1070650 Ga0265319_10706502 179
132 3300028563 Ga0265319_1105030 Ga0265319_11050301 179
133 3300028573 Ga0265334_10052479 Ga0265334_100524792 179
134 3300028800 Ga0265338_10002556 Ga0265338_1000255615 179
135 3300028800 Ga0265338_10008919 Ga0265338_100089192 179
136 3300028800 Ga0265338_10044451 Ga0265338_100444513 179
137 3300028800 Ga0265338_10058341 Ga0265338_100583412 179
138 3300028800 Ga0265338_10064775 Ga0265338_100647754 179
139 3300029957 Ga0265324_10000953 Ga0265324_100009535 179
140 3300029957 Ga0265324_10017669 Ga0265324_100176692 179
141 3300029957 Ga0265324_10086364 Ga0265324_100863642 179
142 3300031240 Ga0265320_10239194 Ga0265320_102391942 179
143 3300031251 Ga0265327_10024658 Ga0265327_100246582 179
144 3300031344 Ga0265316_10072554 Ga0265316_100725543 179
145 3300035083 Ga0373926_0020874 Ga0373926_0020874_92_631 179
146 3300035116 Ga0373945_0027762 Ga0373945_0027762_968_1507 179
147 3300035118 Ga0373954_0020406 Ga0373954_0020406_431_973 179
148 3300035119 Ga0373956_0027727 Ga0373956_0027727_1600_2142 179
149 3300035119 Ga0373956_0082811 Ga0373956_0082811_407_952 179
150 3300035170 Ga0373943_0606013 Ga0373943_0606013_55_594 179
151 3300035410 Ga0373924_0194925 Ga0373924_0194925_64_606 179
152 3300035692 Ga0373935_0080637 Ga0373935_0080637_1465_2004 179
153 3300035725 Ga0373947_0010346 Ga0373947_0010346_1180_1719 179
154 3300035725 Ga0373947_0573393 Ga0373947_0573393_18_563 179
155 3300037068 Ga0373925_0006750 Ga0373925_0006750_1971_2510 179
156 3300037068 Ga0373925_0496512 Ga0373925_0496512_102_644 179
157 3300042876 Ga0451577_0019928 Ga0451577_0019928_2899_3438 179
158 3300042876 Ga0451577_0643371 Ga0451577_0643371_294_842 179
159 3300044719 Ga0466971_0422208 Ga0466971_0422208_41_580 179
160 3300045051 Ga0451576_0039071 Ga0451576_0039071_4352_4891 179
161 3300045051 Ga0451576_0046135 Ga0451576_0046135_1220_1759 179
162 3300045051 Ga0451576_0177754 Ga0451576_0177754_1255_1794 179
163 3300045051 Ga0451576_0979443 Ga0451576_0979443_25_573 179
164 3300045051 Ga0451576_1031585 Ga0451576_1031585_198_737 179
165 3300045051 Ga0451576_1445084 Ga0451576_1445084_91_630 179
166 3300046454 Ga0495592_0041941 Ga0495592_0041941_363_905 179
167 3300046454 Ga0495592_0275488 Ga0495592_0275488_489_1028 179
168 3300046461 Ga0495641_0015839 Ga0495641_0015839_1138_1680 179
169 3300046473 Ga0495582_0166815 Ga0495582_0166815_386_928 179
170 3300046476 Ga0495662_0067987 Ga0495662_0067987_1106_1651 179
171 3300046476 Ga0495662_0311735 Ga0495662_0311735_28_570 179
172 3300046477 Ga0495664_0157546 Ga0495664_0157546_340_882 179
173 3300046516 Ga0495628_0159007 Ga0495628_0159007_828_1370 179
174 3300046516 Ga0495628_0210244 Ga0495628_0210244_765_1304 179
175 3300046517 Ga0495630_0000051 Ga0495630_0000051_55416_55961 179
176 3300046517 Ga0495630_0044394 Ga0495630_0044394_1096_1635 179
177 3300046517 Ga0495630_0099073 Ga0495630_0099073_349_888 179
178 3300046517 Ga0495630_0199420 Ga0495630_0199420_606_1148 179
179 3300046517 Ga0495630_0283726 Ga0495630_0283726_502_1044 179
180 3300046526 Ga0495666_0005531 Ga0495666_0005531_5574_6119 179
181 3300046526 Ga0495666_0242339 Ga0495666_0242339_189_728 179
182 3300046529 Ga0495652_0057439 Ga0495652_0057439_2429_2971 179
183 3300046533 Ga0495640_0097332 Ga0495640_0097332_1074_1616 179
184 3300046535 Ga0495586_0000041 Ga0495586_0000041_22835_23380 179
185 3300046535 Ga0495586_0009772 Ga0495586_0009772_2611_3153 179
186 3300046543 Ga0495645_0034171 Ga0495645_0034171_716_1261 179
187 3300046543 Ga0495645_0130954 Ga0495645_0130954_91_633 179
188 3300046642 Ga0495634_0013228 Ga0495634_0013228_2613_3158 179
189 3300046663 Ga0495635_0206224 Ga0495635_0206224_662_1201 179
190 3300046678 Ga0495599_0048049 Ga0495599_0048049_127_675 179
191 3300046681 Ga0495647_0026199 Ga0495647_0026199_235_777 179
192 3300046683 Ga0495658_0188574 Ga0495658_0188574_634_1176 179
193 3300046689 Ga0495613_0003030 Ga0495613_0003030_1014_1556 179
194 3300046689 Ga0495613_0069241 Ga0495613_0069241_570_1115 179
195 3300046689 Ga0495613_0118072 Ga0495613_0118072_635_1177 179
196 3300046689 Ga0495613_0696021 Ga0495613_0696021_24_566 179
197 3300047319 Ga0495674_0000087 Ga0495674_0000087_18505_19050 179
198 3300047319 Ga0495674_0046281 Ga0495674_0046281_1112_1654 179
199 3300047321 Ga0495676_0008280 Ga0495676_0008280_1490_2035 179
200 3300047321 Ga0495676_0050319 Ga0495676_0050319_2424_2966 179
201 3300047444 Ga0495675_0487097 Ga0495675_0487097_12_551 179
202 3300047471 Ga0495684_0125770 Ga0495684_0125770_1108_1647 179
203 3300047673 Ga0495593_0272332 Ga0495593_0272332_92_634 179
204 3300048089 Ga0495614_0035150 Ga0495614_0035150_1219_1761 179
205 3300048909 Ga0496106_0242776 Ga0496106_0242776_863_1402 179
206 3300048910 Ga0496107_0048249 Ga0496107_0048249_881_1420 179
207 3300048918 Ga0496115_0004467 Ga0496115_0004467_8887_9429 179
208 3300049570 Ga0501033_0255854 Ga0501033_0255854_289_831 179
209 3300049579 Ga0501043_0072129 Ga0501043_0072129_300_839 179
210 3300049581 Ga0501047_0418255 Ga0501047_0418255_505_1044 179
211 3300050514 nmdc:mga08x19_231278_c1 nmdc:mga08x19_231278_c1_197_736 179
212 3300005290 Ga0065712_10120732 Ga0065712_101207321 180
213 3300005354 Ga0070675_100666210 Ga0070675_1006662101 180
214 3300005365 Ga0070688_100143756 Ga0070688_1001437563 180
215 3300005466 Ga0070685_10136384 Ga0070685_101363842 180
216 3300005617 Ga0068859_100355757 Ga0068859_1003557572 180
217 3300005617 Ga0068859_101564466 Ga0068859_1015644662 180
218 3300006880 Ga0075429_100573080 Ga0075429_1005730802 180
219 3300006931 Ga0097620_100355762 Ga0097620_1003557622 180
220 3300006931 Ga0097620_101565188 Ga0097620_1015651882 180
221 3300014325 Ga0163163_10623787 Ga0163163_106237871 180
222 3300014968 Ga0157379_10292244 Ga0157379_102922442 180
223 3300025926 Ga0207659_11282565 Ga0207659_112825651 180
224 3300026088 Ga0207641_11400466 Ga0207641_114004661 180
225 3300026095 Ga0207676_10390501 Ga0207676_103905012 180
226 3300026116 Ga0207674_10158973 Ga0207674_101589732 180
227 3300042876 Ga0451577_0182763 Ga0451577_0182763_217_759 180
228 3300045051 Ga0451576_0202749 Ga0451576_0202749_854_1396 180

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11821

ActD

Alternative complex III, ActD subunit

25

193

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
6loe-assembly1.cif.gz_D cryo-em structure of the dithionite-reduced photosynthetic alternative complex iii from roseiflexus castenholzii 0.8305 6 179
6loe-assembly1.cif.gz_D cryo-em structure of the dithionite-reduced photosynthetic alternative complex iii from roseiflexus castenholzii 0.8263 6 179
6f0k-assembly1.cif.gz_D alternative complex iii 0.7694 8 177
6f0k-assembly1.cif.gz_D alternative complex iii 0.7619 8 177
6btm-assembly1.cif.gz_D structure of alternative complex iii from flavobacterium johnsoniae (wild type) 0.6726 6 179
ID Description Score Start End Superfamily
af_Q6ZGV9_11_120_1.10.10.1740 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Transmembrane protein 14-like 0.6387 56 127 1.10.10.1740
af_A0A143ZXB9_1_167_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.636 56 144 1.20.140.150
3mtjA03 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.6211 6 36 3.30.70.260
af_I1M4W7_25_133_1.10.10.1740 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Transmembrane protein 14-like 0.5822 57 123 1.10.10.1740
af_Q4DXJ1_29_270_1.50.40.10 Mainly Alpha;Alpha/alpha barrel;Mitochondrial carrier fold;Mitochondrial carrier domain 0.5482 41 126 1.50.40.10
ID Description Score Start End GO Terms
AF-A0A4Q3J3X9-F1-model_v4 deleted 0.8664 2 179
AF-A0A1G3ALN0-F1-model_v4 Cytochrome c domain-containing protein 0.8659 3 179 GO:0016020
AF-A0A538QGB3-F1-model_v4 DUF3341 domain-containing protein 0.8569 4 180 GO:0016020
AF-A0A7C2PVU5-F1-model_v4 DUF3341 domain-containing protein 0.8567 1 180 GO:0016020
AF-A0A3M2C3V7-F1-model_v4 DUF3341 domain-containing protein 0.856 2 179 GO:0016020

Feature Viewer

pLDDT pTM Quality
76.02 0.58 Medium
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map