F340466

General Info

Members Datasets Scaffolds Average Seq Length
227 143 454 469

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2747842429|2747954327
Length 499
Sequence HEGPQGLYRPVPALVGSGYRTELSAIKEDAVTTTTTILESITAPEGVGRPIPDAATREVIGHAPVHTVDDLNRAIVNARAAQPAWAAIGHAERSRILNAIADDLDANAEELAVLLSREQGKPLNGPNARFEVGACSIWTRTAADTPLEPEVVFEAGESRAEVHYDPLGVVGAIGPWNWPMMITVWQIAPSLRMGNTVVVKPSEFTPLSVLALAEIFNRHLPEGVLTVISGDREVGAAIASHPDLDKIMFTGSTATGRRIVEASSNNLARLTLELGGNDAGIILPGTDIAAIAENLFWGIFINTGQTCAALKRLYVHDSQYDEVVTTLAKLADAMPLGNGLDEANVLGPLQNEKQFDIVSRLVDDARERGARIVTGGEPAPEHGPLFYRTTIVADIDDGAPLVDEEQFGPVIPVIRYSDVDDAVHRANDSTQGLGASVWSDDPDAASEVARRVQAGTVWINQHGAINPHVPFGGIKASGYGQEFGVAGLKAVAAPKVIQR

Samples

Sample ID Description Type Environment
1 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
2 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
5 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
6 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
7 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
8 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
9 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
10 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
11 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
12 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
13 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
14 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
15 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
21 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
22 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
23 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
24 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
25 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
26 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
27 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
28 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
29 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
30 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
31 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
32 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
33 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
34 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
35 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
36 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
37 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
38 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
39 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
40 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
41 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
42 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
43 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
44 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
45 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
46 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
47 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
48 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
49 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
50 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
51 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
52 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
53 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
54 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
55 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
56 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
57 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
58 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
59 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
60 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
61 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
62 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
63 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
64 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
65 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
66 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
67 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
68 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
69 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
70 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
71 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
72 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
73 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
74 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
75 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
76 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
77 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
78 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
79 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
80 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
81 3300049529 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
82 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
83 3300049537 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B12_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
84 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
90 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
91 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
92 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
93 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
94 2537561592 Arthrobacter crystallopoietes BAB-32 Isolate Rhizosphere
95 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
96 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
97 2643221549 Agromyces sp. Root1464 Isolate Unclassified
98 2643221553 Microbacterium sp. Root553 Isolate Unclassified
99 2643221619 Agromyces sp. Root81 Isolate Unclassified
100 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
101 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
102 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
103 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
104 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
105 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
106 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
107 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
108 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
109 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
110 2808606371 Arthrobacter sp. SLBN-53 Isolate Unclassified
111 2808606372 Agromyces sp. 23-23 Isolate Unclassified
112 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
113 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
114 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
115 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
116 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
117 2897561785 Pseudoclavibacter endophyticus EGI 60007 Isolate Unclassified
118 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
119 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
120 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
121 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
122 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
123 2910809715 Paenarthrobacter sp. CM16 Isolate Unclassified
124 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
125 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
126 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
127 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
128 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
129 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
130 2932426870 Paenarthrobacter sp. 4246 Isolate Rhizosphere
131 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
132 2939647034 Arthrobacter sp. 2762 Isolate Rhizosphere
133 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
134 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
135 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
136 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
137 2946024296 Arthrobacter woluwensis W4I2 Isolate Rhizosphere
138 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
139 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
140 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
141 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
142 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
143 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 72.25
Metatranscriptomes 1.76
Isolates 25.99

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.08
Nodule 0
Rhizoplane 13.66
Rhizosphere 68.72
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1000283 3300002773 Bacteria 33831
2 Ga0065714_10003061 3300005288 Bacteria 16726
3 Ga0070670_100012578 3300005331 Bacteria 7245
4 Ga0070670_100118153 3300005331 Bacteria 2287
5 Ga0070671_100128242 3300005355 Bacteria 2136
6 Ga0070672_100010333 3300005543 Bacteria 6472
7 Ga0075365_10001691 3300006038 Bacteria 10208
8 Ga0075432_10000494 3300006058 Bacteria 11799
9 Ga0105244_10002833 3300009036 Bacteria 12868
10 Ga0105244_10004848 3300009036 Bacteria 9122
11 Ga0105244_10009391 3300009036 Bacteria 6016
12 Ga0157369_10001984 3300013105 Bacteria 24634
13 Ga0163162_10007238 3300013306 Bacteria 10769
14 Ga0163162_10013822 3300013306 Bacteria 7886
15 Ga0209129_1000067 3300025258 Bacteria 219974
16 Ga0209025_1001206 3300025294 Bacteria 36302
17 Ga0209051_1001084 3300025303 Bacteria 25237
18 Ga0207697_10018760 3300025315 Bacteria 2835
19 Ga0207655_1006035 3300025728 Bacteria 8099
20 Ga0207655_1010031 3300025728 Bacteria 5801
21 Ga0207655_1027417 3300025728 Bacteria 2714
22 Ga0207655_1039065 3300025728 Bacteria 2066
23 Ga0207650_10017645 3300025925 Bacteria 4999
24 Ga0207644_10066509 3300025931 Bacteria 2625
25 Ga0207691_10000919 3300025940 Bacteria 29207
26 Ga0207691_10045590 3300025940 Bacteria 4029
27 Ga0207691_10180183 3300025940 Bacteria 1846
28 Ga0207683_10043835 3300026121 Bacteria 3910
29 Ga0207428_10025321 3300027907 Bacteria 4966
30 Ga0307408_100007052 3300031548 Bacteria 7431
31 Ga0307408_100013658 3300031548 Bacteria 5393
32 Ga0307408_100018541 3300031548 Bacteria 4673
33 Ga0307408_100027883 3300031548 Bacteria 3896
34 Ga0307408_100054398 3300031548 Bacteria 2894
35 Ga0307405_10036134 3300031731 Bacteria 2957
36 Ga0307405_10052509 3300031731 Bacteria 2535
37 Ga0307405_10056886 3300031731 Bacteria 2454
38 Ga0307405_10078063 3300031731 Bacteria 2153
39 Ga0307413_10053190 3300031824 Bacteria 2450
40 Ga0307410_10012110 3300031852 Bacteria 4968
41 Ga0307410_10047341 3300031852 Bacteria 2873
42 Ga0307410_10129875 3300031852 Bacteria 1849
43 Ga0307410_10156519 3300031852 Bacteria 1702
44 Ga0307410_10183438 3300031852 Bacteria 1586
45 Ga0307406_10070506 3300031901 Bacteria 2289
46 Ga0307407_10048111 3300031903 Bacteria 2425
47 Ga0307407_10068140 3300031903 Bacteria 2107
48 Ga0307407_10078158 3300031903 Bacteria 1992
49 Ga0307407_10090794 3300031903 Bacteria 1872
50 Ga0307412_10000838 3300031911 Bacteria 17673
51 Ga0307412_10004641 3300031911 Bacteria 7656
52 Ga0307412_10033684 3300031911 Bacteria 3258
53 Ga0307412_10042230 3300031911 Bacteria 2961
54 Ga0307412_10050987 3300031911 Bacteria 2733
55 Ga0307409_100056302 3300031995 Bacteria 3040
56 Ga0307409_100067128 3300031995 Bacteria 2831
57 Ga0307416_100004998 3300032002 Bacteria 8086
58 Ga0307416_100022057 3300032002 Bacteria 4586
59 Ga0307416_100036421 3300032002 Bacteria 3773
60 Ga0307416_100042820 3300032002 Bacteria 3539
61 Ga0307414_10011209 3300032004 Bacteria 5247
62 Ga0307414_10132594 3300032004 Bacteria 1937
63 Ga0395899_0001648 3300037312 Bacteria 18629
64 Ga0395899_0004897 3300037312 Bacteria 10413
65 Ga0395899_0063142 3300037312 Bacteria 2726
66 Ga0395900_0012408 3300037418 Bacteria 8714
67 Ga0395900_0077938 3300037418 Bacteria 3405
68 Ga0395900_0096169 3300037418 Bacteria 3043
69 Ga0395900_0259422 3300037418 Bacteria 1736
70 Ga0395898_0001206 3300037466 Bacteria 39121
71 Ga0395898_0001860 3300037466 Bacteria 27040
72 Ga0395898_0002069 3300037466 Bacteria 24983
73 Ga0395898_0005158 3300037466 Bacteria 14137
74 Ga0395898_0005232 3300037466 Bacteria 14029
75 Ga0395898_0047386 3300037466 Bacteria 4218
76 Ga0395898_0127168 3300037466 Bacteria 2441
77 Ga0395898_0129155 3300037466 Bacteria 2421
78 Ga0395905_0011108 3300037471 Bacteria 8711
79 Ga0395901_0001124 3300038443 Bacteria 28426
80 Ga0395901_0001378 3300038443 Bacteria 25427
81 Ga0395901_0007468 3300038443 Bacteria 11035
82 Ga0395901_0026494 3300038443 Bacteria 5952
83 Ga0395901_0166968 3300038443 Bacteria 2310
84 Ga0439442_000059 3300042002 Bacteria 25930
85 Ga0439449_0001820 3300042007 Bacteria 8384
86 Ga0439449_0004336 3300042007 Bacteria 5474
87 Ga0450920_000045 3300042122 Bacteria 15447
88 Ga0450920_000092 3300042122 Bacteria 12028
89 Ga0450920_003335 3300042122 Bacteria 2775
90 Ga0450907_000286 3300042146 Bacteria 17142
91 Ga0450907_000524 3300042146 Bacteria 10521
92 Ga0439434_0000632 3300042435 Bacteria 10109
93 Ga0439434_0000743 3300042435 Bacteria 9357
94 Ga0466967_0058692 3300045976 Bacteria 3402
95 Ga0495653_0007781 3300046463 Bacteria 8772
96 Ga0495580_0036743 3300046472 Bacteria 3516
97 Ga0495582_0020160 3300046473 Bacteria 3649
98 Ga0495582_0085601 3300046473 Bacteria 1754
99 Ga0495662_0004085 3300046476 Bacteria 7351
100 Ga0495630_0021860 3300046517 Bacteria 4724
101 Ga0495631_0021499 3300046518 Bacteria 3005
102 Ga0495643_0052778 3300046522 Bacteria 2182
103 Ga0495665_0001009 3300046531 Bacteria 14930
104 Ga0495586_0004829 3300046535 Bacteria 7206
105 Ga0495586_0014630 3300046535 Bacteria 4169
106 Ga0495645_0006522 3300046543 Bacteria 8101
107 Ga0495667_0001677 3300046559 Bacteria 14692
108 Ga0495635_0022668 3300046663 Bacteria 4377
109 Ga0495588_0000359 3300046674 Bacteria 28322
110 Ga0495588_0001663 3300046674 Bacteria 9488
111 Ga0495588_0002229 3300046674 Bacteria 8298
112 Ga0495588_0040027 3300046674 Bacteria 2389
113 Ga0495670_0003633 3300046691 Bacteria 7580
114 Ga0495600_0019881 3300046809 Bacteria 4292
115 Ga0495581_0020089 3300047315 Bacteria 3877
116 Ga0495593_0034207 3300047673 Bacteria 2765
117 Ga0496100_0013221 3300048903 Bacteria 4753
118 Ga0496100_0049435 3300048903 Bacteria 2719
119 Ga0496101_0006419 3300048904 Bacteria 7564
120 Ga0496101_0007011 3300048904 Bacteria 7279
121 Ga0496101_0030422 3300048904 Bacteria 3785
122 Ga0496102_0005412 3300048905 Bacteria 10841
123 Ga0496102_0097169 3300048905 Bacteria 2731
124 Ga0496103_0010376 3300048906 Bacteria 5512
125 Ga0496103_0036534 3300048906 Bacteria 3008
126 Ga0496103_0063189 3300048906 Bacteria 2305
127 Ga0496104_0001944 3300048907 Bacteria 17917
128 Ga0496104_0025041 3300048907 Bacteria 5497
129 Ga0496105_0007041 3300048908 Bacteria 8665
130 Ga0496105_0031063 3300048908 Bacteria 4378
131 Ga0496106_0044559 3300048909 Bacteria 3330
132 Ga0496107_0009064 3300048910 Bacteria 6898
133 Ga0496107_0012927 3300048910 Bacteria 5832
134 Ga0496108_0238891 3300048911 Bacteria 1580
135 Ga0496109_0020156 3300048912 Bacteria 5891
136 Ga0496109_0069505 3300048912 Bacteria 3230
137 Ga0496110_0028439 3300048913 Bacteria 4801
138 Ga0496111_0033927 3300048914 Bacteria 3641
139 Ga0496111_0099357 3300048914 Bacteria 2137
140 Ga0496112_0004061 3300048915 Bacteria 12283
141 Ga0496112_0011811 3300048915 Bacteria 7996
142 Ga0496113_0014424 3300048916 Bacteria 5390
143 Ga0496114_0005983 3300048917 Bacteria 9576
144 Ga0496114_0087043 3300048917 Bacteria 2648
145 Ga0496115_0103733 3300048918 Bacteria 2333
146 Ga0496115_0127342 3300048918 Bacteria 2098
147 Ga0496115_0202394 3300048918 Bacteria 1640
148 Ga0496117_0001961 3300048920 Bacteria 27354
149 Ga0496118_0066721 3300048921 Bacteria 2625
150 Ga0496124_0113781 3300048927 Bacteria 2174
151 Ga0496125_0074477 3300048928 Bacteria 2632
152 Ga0496126_0016360 3300048929 Bacteria 7420
153 Ga0501306_000687 3300049127 Bacteria 2759
154 Ga0501313_004517 3300049529 Bacteria 1433
155 Ga0501317_000432 3300049533 Bacteria 2904
156 Ga0501321_000554 3300049537 Bacteria 2468
157 Ga0501032_0017510 3300049569 Bacteria 5029
158 Ga0501034_0000038 3300049571 Bacteria 237795
159 Ga0501034_0043459 3300049571 Bacteria 4547
160 Ga0501036_0021961 3300049572 Bacteria 5367
161 Ga0501037_0023114 3300049573 Bacteria 4598
162 Ga0501039_0029559 3300049575 Bacteria 4220
163 Ga0501039_0039886 3300049575 Bacteria 3625
164 Ga0501070_0026683 3300049586 Bacteria 4846
165 Ga0501243_008056 3300049675 Bacteria 1620
166 Ga0501279_006968 3300049775 Bacteria 1497
167 nmdc:mga0yw44_13549_c1 3300050492 Bacteria 4298
168 nmdc:mga0yw44_57836_c1 3300050492 Bacteria 2367
169 2747954327 2747842429 Bacteria 3914386
170 2537900511 2537561592 Bacteria 4348607
171 2555229083 2554235227 Bacteria 3637389
172 2587863968 2585428094 Bacteria 3604039
173 2643768294 2643221549 Bacteria 4042819
174 2643783414 2643221553 Bacteria 3544260
175 2643784939 2643221553 Bacteria 3544260
176 2644111708 2643221619 Bacteria 4158469
177 2655033564 2654587600 Bacteria 3911798
178 2691515689 2690315906 Bacteria 4517044
179 2723643026 2721755702 Bacteria 4373124
180 2738692773 2738541272 Bacteria 6848551
181 2739323854 2738543027 Bacteria 6409078
182 2747952334 2747842429 Bacteria 3914386
183 2775655796 2775506735 Bacteria 4556596
184 2775657405 2775506735 Bacteria 4556596
185 2808828846 2808606357 Bacteria 4466944
186 2808850081 2808606360 Bacteria 4404006
187 2808877367 2808606366 Bacteria 4415912
188 2808893082 2808606370 Bacteria 4942454
189 2808898843 2808606371 Bacteria 4251511
190 2808903005 2808606372 Bacteria 4649509
191 2812319449 2811994871 Bacteria 4497550
192 2812321406 2811994871 Bacteria 4497550
193 2812324698 2811994872 Bacteria 4121241
194 2844852617 2844849076 Bacteria 4091819
195 2857742875 2857740372 Bacteria 4782044
196 2891971289 2891968417 Bacteria 5821697
197 2897562595 2897561785 Bacteria 3256946
198 2904501137 2904497146 Bacteria 4731781
199 2904766360 2904765812 Bacteria 5369154
200 2904770242 2904765812 Bacteria 5369154
201 2904779082 2904776348 Bacteria 4658726
202 2905927091 2905926851 Bacteria 4423176
203 2906801947 2906799679 Bacteria 4031749
204 2910812626 2910809715 Bacteria 4982797
205 2919037204 2919034639 Bacteria 4763403
206 2919037947 2919034639 Bacteria 4763403
207 2919051843 2919051321 Bacteria 4210889
208 2919053823 2919051321 Bacteria 4210889
209 2919061480 2919059106 Bacteria 4991624
210 2919421214 2919420072 Bacteria 5390363
211 2919433028 2919432681 Bacteria 5390474
212 2919542933 2919538618 Bacteria 4677069
213 2932430861 2932426870 Bacteria 4547726
214 2933419419 2933418574 Bacteria 4476724
215 2939650819 2939647034 Bacteria 4681660
216 2939675704 2939674588 Bacteria 4844420
217 2945917200 2945916053 Bacteria 4555517
218 2945922539 2945920336 Bacteria 4501603
219 2945956675 2945956166 Bacteria 5110334
220 2946025931 2946024296 Bacteria 3508095
221 2946037171 2946037020 Bacteria 4900426
222 2946061004 2946059875 Bacteria 4386623
223 2953998426 2953998280 Bacteria 4812144
224 2953998598 2953998280 Bacteria 4812144
225 2974305152 2974302888 Bacteria 4369871
226 8004022330 8004021418 Bacteria 4313954
227 8004026658 8004025490 Bacteria 4327753
228 JGI25152J39213_1000283
229 Ga0065714_10003061
230 Ga0070670_100012578
231 Ga0070670_100118153
232 Ga0070671_100128242
233 Ga0070672_100010333
234 Ga0075365_10001691
235 Ga0075432_10000494
236 Ga0105244_10002833
237 Ga0105244_10004848
238 Ga0105244_10009391
239 Ga0157369_10001984
240 Ga0163162_10007238
241 Ga0163162_10013822
242 Ga0209129_1000067
243 Ga0209025_1001206
244 Ga0209051_1001084
245 Ga0207697_10018760
246 Ga0207655_1006035
247 Ga0207655_1010031
248 Ga0207655_1027417
249 Ga0207655_1039065
250 Ga0207650_10017645
251 Ga0207644_10066509
252 Ga0207691_10000919
253 Ga0207691_10045590
254 Ga0207691_10180183
255 Ga0207683_10043835
256 Ga0207428_10025321
257 Ga0307408_100007052
258 Ga0307408_100013658
259 Ga0307408_100018541
260 Ga0307408_100027883
261 Ga0307408_100054398
262 Ga0307405_10036134
263 Ga0307405_10052509
264 Ga0307405_10056886
265 Ga0307405_10078063
266 Ga0307413_10053190
267 Ga0307410_10012110
268 Ga0307410_10047341
269 Ga0307410_10129875
270 Ga0307410_10156519
271 Ga0307410_10183438
272 Ga0307406_10070506
273 Ga0307407_10048111
274 Ga0307407_10068140
275 Ga0307407_10078158
276 Ga0307407_10090794
277 Ga0307412_10000838
278 Ga0307412_10004641
279 Ga0307412_10033684
280 Ga0307412_10042230
281 Ga0307412_10050987
282 Ga0307409_100056302
283 Ga0307409_100067128
284 Ga0307416_100004998
285 Ga0307416_100022057
286 Ga0307416_100036421
287 Ga0307416_100042820
288 Ga0307414_10011209
289 Ga0307414_10132594
290 Ga0395899_0001648
291 Ga0395899_0004897
292 Ga0395899_0063142
293 Ga0395900_0012408
294 Ga0395900_0077938
295 Ga0395900_0096169
296 Ga0395900_0259422
297 Ga0395898_0001206
298 Ga0395898_0001860
299 Ga0395898_0002069
300 Ga0395898_0005158
301 Ga0395898_0005232
302 Ga0395898_0047386
303 Ga0395898_0127168
304 Ga0395898_0129155
305 Ga0395905_0011108
306 Ga0395901_0001124
307 Ga0395901_0001378
308 Ga0395901_0007468
309 Ga0395901_0026494
310 Ga0395901_0166968
311 Ga0439442_000059
312 Ga0439449_0001820
313 Ga0439449_0004336
314 Ga0450920_000045
315 Ga0450920_000092
316 Ga0450920_003335
317 Ga0450907_000286
318 Ga0450907_000524
319 Ga0439434_0000632
320 Ga0439434_0000743
321 Ga0466967_0058692
322 Ga0495653_0007781
323 Ga0495580_0036743
324 Ga0495582_0020160
325 Ga0495582_0085601
326 Ga0495662_0004085
327 Ga0495630_0021860
328 Ga0495631_0021499
329 Ga0495643_0052778
330 Ga0495665_0001009
331 Ga0495586_0004829
332 Ga0495586_0014630
333 Ga0495645_0006522
334 Ga0495667_0001677
335 Ga0495635_0022668
336 Ga0495588_0000359
337 Ga0495588_0001663
338 Ga0495588_0002229
339 Ga0495588_0040027
340 Ga0495670_0003633
341 Ga0495600_0019881
342 Ga0495581_0020089
343 Ga0495593_0034207
344 Ga0496100_0013221
345 Ga0496100_0049435
346 Ga0496101_0006419
347 Ga0496101_0007011
348 Ga0496101_0030422
349 Ga0496102_0005412
350 Ga0496102_0097169
351 Ga0496103_0010376
352 Ga0496103_0036534
353 Ga0496103_0063189
354 Ga0496104_0001944
355 Ga0496104_0025041
356 Ga0496105_0007041
357 Ga0496105_0031063
358 Ga0496106_0044559
359 Ga0496107_0009064
360 Ga0496107_0012927
361 Ga0496108_0238891
362 Ga0496109_0020156
363 Ga0496109_0069505
364 Ga0496110_0028439
365 Ga0496111_0033927
366 Ga0496111_0099357
367 Ga0496112_0004061
368 Ga0496112_0011811
369 Ga0496113_0014424
370 Ga0496114_0005983
371 Ga0496114_0087043
372 Ga0496115_0103733
373 Ga0496115_0127342
374 Ga0496115_0202394
375 Ga0496117_0001961
376 Ga0496118_0066721
377 Ga0496124_0113781
378 Ga0496125_0074477
379 Ga0496126_0016360
380 Ga0501306_000687
381 Ga0501313_004517
382 Ga0501317_000432
383 Ga0501321_000554
384 Ga0501032_0017510
385 Ga0501034_0000038
386 Ga0501034_0043459
387 Ga0501036_0021961
388 Ga0501037_0023114
389 Ga0501039_0029559
390 Ga0501039_0039886
391 Ga0501070_0026683
392 Ga0501243_008056
393 Ga0501279_006968
394 nmdc:mga0yw44_13549_c1
395 nmdc:mga0yw44_57836_c1
396 2747954327
397 2537900511
398 2555229083
399 2587863968
400 2643768294
401 2643783414
402 2643784939
403 2644111708
404 2655033564
405 2691515689
406 2723643026
407 2738692773
408 2739323854
409 2747952334
410 2775655796
411 2775657405
412 2808828846
413 2808850081
414 2808877367
415 2808893082
416 2808898843
417 2808903005
418 2812319449
419 2812321406
420 2812324698
421 2844852617
422 2857742875
423 2891971289
424 2897562595
425 2904501137
426 2904766360
427 2904770242
428 2904779082
429 2905927091
430 2906801947
431 2910812626
432 2919037204
433 2919037947
434 2919051843
435 2919053823
436 2919061480
437 2919421214
438 2919433028
439 2919542933
440 2932430861
441 2933419419
442 2939650819
443 2939675704
444 2945917200
445 2945922539
446 2945956675
447 2946025931
448 2946037171
449 2946061004
450 2953998426
451 2953998598
452 2974305152
453 8004022330
454 8004026658

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00171

Aldedh

Aldehyde dehydrogenase family

45

497

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
4v6h-assembly1.cif.gz_A crystal structure of succinate-semialdehyde dehydrogenase from burkholderia pseudomallei 0.9509 31 483
3jz4-assembly1.cif.gz_B crystal structure of e. coli nadp dependent enzyme 0.9471 26 482
3vz0-assembly2.cif.gz_C structural insights into cofactor and substrate selection by gox0499 0.9464 32 481
3u4j-assembly1.cif.gz_B crystal structure of nad-dependent aldehyde dehydrogenase from sinorhizobium meliloti 0.9447 25 483
3ek1-assembly2.cif.gz_G crystal structure of aldehyde dehydrogenase from brucella melitensis biovar abortus 2308 0.9444 25 483
ID Description Score Start End Superfamily
af_Q9UTM8_272_454_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9555 266 445 3.40.309.10
af_Q4DYS1_277_499_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9552 260 474 3.40.309.10
af_Q9URW9_34_486_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9529 31 479 3.40.605.10
af_O59808_274_459_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9523 260 445 3.40.309.10
af_Q9VBP6_28_503_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9519 31 483 3.40.605.10
ID Description Score Start End GO Terms
AF-A0A3D3KVM6-F1-model_v4 Aldehyde dehydrogenase 0.9875 15 131 GO:0016491
AF-A0A3D3KVM6-F1-model_v4 Aldehyde dehydrogenase 0.9792 15 131 GO:0016491
AF-A0A6J7P4F6-F1-model_v4 Unannotated protein 0.9629 223 474 GO:0004777
GO:0009450
AF-A0A3E2HID5-F1-model_v4 Aldehyde dehydrogenase domain-containing protein 0.9607 186 474 GO:0004777
GO:0009450
AF-A0A1B7YDH2-F1-model_v4 Succinate-semialdehyde dehydrogenase, mitochondrial (EC 1.2.1.24) (NAD(+)-dependent succinic semialdehyde dehydrogenase) 0.9598 167 477 GO:0004777
GO:0005737
GO:0009450

Map