F340460

General Info

Members Datasets Scaffolds Average Seq Length
227 191 205 299

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221625|2644141922
Length 341
Sequence RAVQAVILSLPACLDIRGDSSTRSGTLASGITAALSHGAGAGSLMGSVQNTFQIATGEASISGQASGSGPPLLLLHGFPQTRLMWRSVLPFIEERFTVVCPDLRGYGDSGCPVSSPDHLPYSKRVMAQDMVTVMERLGFRRFSVAGHDRGGRVAYRMALDHVLHVEMLAVLDVLPTETAWSRADARLAMAFWPWSLLAQPAPLPERILEAAAAAVVENALTQWGTPGNTFPANVRTAYVESLANPDHAHAICEEYRAAATIDREHDRADLAAGRRIACPVLALWSAEGGLGSWYEDEGGPLALWRQWCDDVRGHPVQGGHFFPEERPGQTAEELARFFAHG

Samples

Sample ID Description Type Environment
1 2513237094 Bradyrhizobium sp. WSM3983 Isolate Nodule
2 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
3 2599185178 Ralstonia sp. NFACC01 Isolate Rhizoplane
4 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
5 2643221640 Caulobacter sp. Root342 Isolate Unclassified
6 2643221642 Caulobacter sp. Root343 Isolate Unclassified
7 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
8 2838068647 Rhizobium esperanzae VC28 Isolate Nodule
9 2842264693 Rhizobium phaseoli SEMIA 487 Isolate Nodule
10 2842422224 Rhizobium esperanzae SEMIA 4042 Isolate Nodule
11 2842434925 Rhizobium esperanzae SEMIA 4051 Isolate Nodule
12 2842441272 Rhizobium esperanzae SEMIA 4053 Isolate Nodule
13 2842447887 Rhizobium esperanzae SEMIA 4055 Isolate Nodule
14 2842462802 Rhizobium phaseoli SEMIA 4057 Isolate Nodule
15 2842469257 Rhizobium phaseoli SEMIA 4058 Isolate Nodule
16 2885192300 Variovorax sp. MHTC-1 Isolate Rhizosphere
17 2900577576 Ralstonia sp. TCR112 Isolate Rhizosphere
18 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
19 2928058823 Ralstonia sp. 1138 Isolate Unclassified
20 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
21 2933599457 Rhizobium phaseoli M3 Isolate Nodule
22 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
23 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
24 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
26 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
27 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
28 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
29 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
30 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
31 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
32 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
33 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
34 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
35 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
36 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
37 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
38 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
39 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
40 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
41 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
42 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
43 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
44 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
45 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
46 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
47 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
48 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
49 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
50 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
51 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
52 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
53 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
54 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
55 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
56 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
57 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
58 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
59 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
60 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
61 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
62 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
63 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
64 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
65 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
66 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
67 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
68 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
69 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
70 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
71 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
72 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
73 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
74 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
75 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
76 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
77 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
78 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
79 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
80 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
81 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
82 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
83 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
84 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
85 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
86 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
87 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
88 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
89 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
90 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
91 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
92 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
93 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
94 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
95 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
96 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
97 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
98 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
99 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
100 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
105 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
106 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
107 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
110 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
111 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
112 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
113 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
114 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
137 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
138 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
139 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
141 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
143 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
144 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
145 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
146 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
147 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
148 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
149 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
150 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
151 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
152 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
153 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
154 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
155 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
156 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
157 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
158 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
159 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
160 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
161 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
162 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
163 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
164 3300044650 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4E Metagenome Unclassified
165 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
166 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
167 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
168 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
169 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
170 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
171 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
172 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
173 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
174 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
175 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
176 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
177 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
178 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
179 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
180 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
181 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
182 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
183 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
184 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
185 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
186 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
187 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
188 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
189 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
190 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
191 8005626139 Rhizobium phaseoli Y18 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 88.99
Metatranscriptomes 1.32
Isolates 9.69

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 24.23
Nodule 7.05
Rhizoplane 3.52
Rhizosphere 59.03
Stem 0
Stem Tuber 0
Unclassified 6.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1000116 3300001915 Bacteria 21579
2 JGI24740J21852_10000211 3300001979 Bacteria 24368
3 JGI25406J46586_10000608 3300003203 Bacteria 16821
4 Ga0055538_1003179 3300003751 Bacteria 2148
5 Ga0055538_1004002 3300003751 Bacteria 1748
6 Ga0055539_1000117 3300003752 Bacteria 88034
7 Ga0055533_1001856 3300003756 Bacteria 5278
8 Ga0055533_1007182 3300003756 Bacteria 1543
9 Ga0055532_1000025 3300003758 Bacteria 240145
10 Ga0055525_1000997 3300003759 Bacteria 7554
11 Ga0055535_1000019 3300003761 Bacteria 240145
12 Ga0055529_1000035 3300003763 Bacteria 240145
13 Ga0055531_10001536 3300003794 Bacteria 16903
14 Ga0055541_1009170 3300003841 Bacteria 1543
15 Ga0065707_10082454 3300005295 Bacteria 14964
16 Ga0070682_100035373 3300005337 Bacteria 3049
17 Ga0070691_10016754 3300005341 Bacteria 3370
18 Ga0070661_100003800 3300005344 Bacteria 10404
19 Ga0070692_10086333 3300005345 Unclassified 1698
20 Ga0070673_100469654 3300005364 Bacteria 1134
21 Ga0070713_100390727 3300005436 Unclassified 1298
22 Ga0070711_100494667 3300005439 Bacteria 1007
23 Ga0070708_100518865 3300005445 Unclassified 1124
24 Ga0070663_100000019 3300005455 Bacteria 114134
25 Ga0070678_100436970 3300005456 Bacteria 1144
26 Ga0070685_10051351 3300005466 Bacteria 2384
27 Ga0070706_100008075 3300005467 Bacteria 9818
28 Ga0070706_100041847 3300005467 Bacteria 4231
29 Ga0070707_100435261 3300005468 Unclassified 1272
30 Ga0070699_100177802 3300005518 Unclassified 1888
31 Ga0070697_100200631 3300005536 Bacteria 1696
32 Ga0068853_100003335 3300005539 Bacteria 12290
33 Ga0068853_100014210 3300005539 Bacteria 6515
34 Ga0070672_100416787 3300005543 Bacteria 1153
35 Ga0070695_100006289 3300005545 Bacteria 7018
36 Ga0070695_100011138 3300005545 Bacteria 5376
37 Ga0068855_100375234 3300005563 Bacteria 1562
38 Ga0070664_100000011 3300005564 Bacteria 162277
39 Ga0068857_100027407 3300005577 Bacteria 5026
40 Ga0068857_100039857 3300005577 Bacteria 4163
41 Ga0068854_100000007 3300005578 Bacteria 182830
42 Ga0068856_100001459 3300005614 Bacteria 24786
43 Ga0068852_100083015 3300005616 Bacteria 2849
44 Ga0068859_100345744 3300005617 Bacteria 1582
45 Ga0081538_10001078 3300005981 Bacteria 29015
46 Ga0081538_10022006 3300005981 Bacteria 4632
47 Ga0081540_1011598 3300005983 Bacteria 5882
48 Ga0081539_10000396 3300005985 Bacteria 93686
49 Ga0081539_10001210 3300005985 Bacteria 46292
50 Ga0081539_10093149 3300005985 Bacteria 1553
51 Ga0081539_10097741 3300005985 Bacteria 1503
52 Ga0070717_10087389 3300006028 Bacteria 2625
53 Ga0075365_10072565 3300006038 Bacteria 2319
54 Ga0075365_10076554 3300006038 Bacteria 2259
55 Ga0075365_10083962 3300006038 Bacteria 2161
56 Ga0075368_10007166 3300006042 Bacteria 3928
57 Ga0075368_10030880 3300006042 Bacteria 2076
58 Ga0075368_10095231 3300006042 Bacteria 1220
59 Ga0075364_10022637 3300006051 Bacteria 3971
60 Ga0075364_10061963 3300006051 Bacteria 2454
61 Ga0075364_10132606 3300006051 Bacteria 1673
62 Ga0075362_10050519 3300006177 Bacteria 1859
63 Ga0075367_10117002 3300006178 Bacteria 1640
64 Ga0075367_10124948 3300006178 Bacteria 1587
65 Ga0075366_10046262 3300006195 Bacteria 2578
66 Ga0075366_10073163 3300006195 Bacteria 2043
67 Ga0075366_10163917 3300006195 Bacteria 1347
68 Ga0097621_100345371 3300006237 Bacteria 1322
69 Ga0075370_10022813 3300006353 Bacteria 3441
70 Ga0075370_10183229 3300006353 Bacteria 1233
71 Ga0075428_100409475 3300006844 Bacteria 1453
72 Ga0075431_100202488 3300006847 Bacteria 2031
73 Ga0075433_10027658 3300006852 Bacteria 4812
74 Ga0075434_100091745 3300006871 Bacteria 3039
75 Ga0075434_100628644 3300006871 Bacteria 1092
76 Ga0097620_100345751 3300006931 Bacteria 1582
77 Ga0099824_1031369 3300006942 Bacteria 2023
78 Ga0099823_1000008 3300006944 Bacteria 105646
79 Ga0099794_10000835 3300007265 Bacteria 10392
80 Ga0105244_10020047 3300009036 Bacteria 3718
81 Ga0105240_10314666 3300009093 Bacteria 1786
82 Ga0105245_10574140 3300009098 Bacteria 1152
83 Ga0105247_10026709 3300009101 Bacteria 3488
84 Ga0114129_10010666 3300009147 Bacteria 13103
85 Ga0114129_10210875 3300009147 Unclassified 2626
86 Ga0114129_10511757 3300009147 Bacteria 1566
87 Ga0105248_10164609 3300009177 Unclassified 2500
88 Ga0105237_10038668 3300009545 Bacteria 4817
89 Ga0099796_10009509 3300010159 Bacteria 2634
90 Ga0157373_10438675 3300013100 Bacteria 939
91 Ga0157371_10000033 3300013102 Bacteria 225328
92 Ga0157370_10000010 3300013104 Bacteria 218199
93 Ga0157369_10188631 3300013105 Bacteria 2167
94 Ga0163162_10059795 3300013306 Bacteria 3843
95 Ga0157375_10934850 3300013308 Bacteria 1010
96 Ga0157379_10240371 3300014968 Bacteria 1643
97 Ga0206355_1060024 3300020076 Unclassified 1108
98 Ga0206351_10066990 3300020077 Bacteria 3663
99 Ga0154015_1643947 3300020610 Bacteria 15586
100 Ga0213876_10133504 3300021384 Bacteria 1320
101 Ga0209784_100008 3300025224 Bacteria 740293
102 Ga0209566_100006 3300025225 Bacteria 789272
103 Ga0209674_100070 3300025226 Bacteria 242214
104 Ga0209674_105621 3300025226 Bacteria 1819
105 Ga0209672_102196 3300025228 Bacteria 5095
106 Ga0209147_100005 3300025229 Bacteria 1036530
107 Ga0209563_100016 3300025230 Bacteria 802091
108 Ga0209258_100007 3300025242 Bacteria 1036530
109 Ga0209026_1014009 3300025250 Bacteria 1350
110 Ga0209677_100008 3300025253 Bacteria 802091
111 Ga0209148_1007067 3300025254 Bacteria 2366
112 Ga0209759_1001306 3300025256 Bacteria 14711
113 Ga0209759_1016296 3300025256 Bacteria 1882
114 Ga0209455_1000011 3300025272 Bacteria 947242
115 Ga0209676_1000860 3300025292 Bacteria 39100
116 Ga0209051_1001355 3300025303 Bacteria 21247
117 Ga0209257_1000651 3300025304 Bacteria 55163
118 Ga0207655_1010540 3300025728 Bacteria 5594
119 Ga0207688_10022428 3300025901 Bacteria 3455
120 Ga0207684_10001792 3300025910 Bacteria 22526
121 Ga0207684_10141796 3300025910 Unclassified 2066
122 Ga0207707_10150032 3300025912 Bacteria 2038
123 Ga0207695_10003008 3300025913 Bacteria 24230
124 Ga0207695_10015319 3300025913 Bacteria 9031
125 Ga0207671_10003810 3300025914 Bacteria 14766
126 Ga0207649_10000279 3300025920 Bacteria 40175
127 Ga0207694_10003622 3300025924 Bacteria 12231
128 Ga0207706_10338893 3300025933 Bacteria 1308
129 Ga0207689_10080852 3300025942 Bacteria 2671
130 Ga0207679_10000002 3300025945 Bacteria 634491
131 Ga0207712_10001382 3300025961 Bacteria 16613
132 Ga0207712_10298259 3300025961 Bacteria 1321
133 Ga0207668_10150924 3300025972 Bacteria 1799
134 Ga0207640_10000101 3300025981 Bacteria 66091
135 Ga0207703_10399068 3300026035 Bacteria 1276
136 Ga0207678_10000043 3300026067 Bacteria 94284
137 Ga0207702_10000010 3300026078 Bacteria 292789
138 Ga0207702_10186570 3300026078 Bacteria 1913
139 Ga0207641_10030273 3300026088 Bacteria 4483
140 Ga0207648_10080225 3300026089 Bacteria 2847
141 Ga0207674_10016487 3300026116 Bacteria 8086
142 Ga0207675_100480329 3300026118 Bacteria 1235
143 Ga0207683_10323299 3300026121 Bacteria 1413
144 Ga0209389_1000032 3300027296 Bacteria 134064
145 Ga0209489_100035 3300027361 Bacteria 168255
146 Ga0209700_100005 3300027363 Bacteria 573969
147 Ga0209588_1005712 3300027671 Bacteria 3575
148 Ga0209588_1025169 3300027671 Bacteria 1881
149 Ga0209813_10012549 3300027866 Bacteria 2243
150 Ga0268264_10071798 3300028381 Bacteria 2934
151 Ga0307515_10009357 3300028794 Bacteria 18953
152 Ga0314311_1180603 3300030733 Bacteria 5183
153 Ga0316180_1174351 3300030736 Bacteria 2007
154 Ga0307405_10013553 3300031731 Bacteria 4353
155 Ga0307412_10035720 3300031911 Bacteria 3178
156 Ga0307416_100372373 3300032002 Bacteria 1455
157 Ga0307415_100168482 3300032126 Bacteria 1705
158 Ga0395900_0359450 3300037418 Bacteria 1428
159 Ga0395905_0027194 3300037471 Bacteria 5395
160 Ga0436365_0102668 3300039437 Bacteria 3351
161 Ga0436363_1193847 3300039450 Bacteria 3172
162 Ga0439465_0002919 3300041413 Bacteria 5598
163 Ga0439433_0003320 3300041999 Bacteria 3448
164 Ga0439442_001873 3300042002 Bacteria 4124
165 Ga0439445_0001149 3300042004 Bacteria 5683
166 Ga0439432_002790 3300042006 Bacteria 6511
167 Ga0439449_0000292 3300042007 Bacteria 18083
168 Ga0439449_0014834 3300042007 Bacteria 2928
169 Ga0439452_002369 3300042010 Bacteria 7000
170 Ga0439457_003420 3300042014 Bacteria 4317
171 Ga0439462_0006113 3300042015 Bacteria 2983
172 Ga0439446_0004562 3300042156 Bacteria 3511
173 Ga0439464_0000318 3300042439 Bacteria 9184
174 Ga0466986_0006395 3300044650 Bacteria 6754
175 Ga0451576_0274814 3300045051 Unclassified 1761
176 Ga0495580_0041727 3300046472 Bacteria 3271
177 Ga0495585_0164885 3300046492 Bacteria 1148
178 Ga0495637_0082191 3300046520 Bacteria 1283
179 Ga0495589_0120784 3300046794 Bacteria 1262
180 Ga0496100_0146990 3300048903 Unclassified 1677
181 Ga0496102_0484597 3300048905 Bacteria 1158
182 Ga0496104_0344808 3300048907 Bacteria 1402
183 Ga0496106_0182911 3300048909 Bacteria 1664
184 Ga0496107_0205533 3300048910 Bacteria 1464
185 Ga0496112_0214812 3300048915 Bacteria 1880
186 Ga0496114_0100367 3300048917 Bacteria 2470
187 nmdc:mga03683_33166_c1 3300050489 Bacteria 2081
188 nmdc:mga03n38_140326_c1 3300050490 Bacteria 1206
189 nmdc:mga03n38_194939_c1 3300050490 Bacteria 1045
190 nmdc:mga00v17_25298_c1 3300050491 Bacteria 3450
191 nmdc:mga0yw44_33622_c1 3300050492 Bacteria 2997
192 nmdc:mga06z11_34414_c1 3300050494 Bacteria 2487
193 nmdc:mga07m45_67473_c1 3300050496 Bacteria 2033
194 nmdc:mga05p37_363597_c1 3300050507 Bacteria 1700
195 nmdc:mga05p37_559299_c1 3300050507 Bacteria 1300
196 nmdc:mga05p37_64457_c1 3300050507 Bacteria 4509
197 nmdc:mga06r32_191720_c1 3300050510 Bacteria 2031
198 nmdc:mga0n895_572542_c1 3300050512 Bacteria 1134
199 nmdc:mga0a205_124772_c1 3300050515 Bacteria 2474
200 nmdc:mga0a205_189295_c1 3300050515 Unclassified 1950
201 Ga0500595_003230 3300053119 Bacteria 7692
202 Ga0500595_026311 3300053119 Unclassified 2006
203 Ga0500559_0000036 3300053136 Bacteria 110748
204 Ga0500561_0000001 3300053137 Bacteria 957685
205 Ga0500568_0003987 3300053139 Bacteria 8017

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005436 Ga0070713_100390727 Ga0070713_1003907272 279
2 3300005445 Ga0070708_100518865 Ga0070708_1005188651 279
3 3300005467 Ga0070706_100041847 Ga0070706_1000418475 279
4 3300005518 Ga0070699_100177802 Ga0070699_1001778022 279
5 3300006028 Ga0070717_10087389 Ga0070717_100873893 279
6 3300007265 Ga0099794_10000835 Ga0099794_100008353 279
7 3300025910 Ga0207684_10141796 Ga0207684_101417962 279
8 3300027671 Ga0209588_1025169 Ga0209588_10251691 279
9 3300006942 Ga0099824_1031369 Ga0099824_10313691 280
10 3300006944 Ga0099823_1000008 Ga0099823_1000008100 280
11 3300009101 Ga0105247_10026709 Ga0105247_100267091 280
12 3300010159 Ga0099796_10009509 Ga0099796_100095093 280
13 3300025961 Ga0207712_10001382 Ga0207712_1000138213 280
14 3300027296 Ga0209389_1000032 Ga0209389_100003219 280
15 3300027361 Ga0209489_100035 Ga0209489_100035160 280
16 3300027363 Ga0209700_100005 Ga0209700_100005162 280
17 3300027671 Ga0209588_1005712 Ga0209588_10057124 280
18 3300006844 Ga0075428_100409475 Ga0075428_1004094752 281
19 3300006847 Ga0075431_100202488 Ga0075431_1002024883 281
20 3300006852 Ga0075433_10027658 Ga0075433_100276585 281
21 3300006871 Ga0075434_100628644 Ga0075434_1006286441 281
22 3300009147 Ga0114129_10010666 Ga0114129_100106664 281
23 3300050507 nmdc:mga05p37_64457_c1 nmdc:mga05p37_64457_c1_856_1725 281
24 3300050510 nmdc:mga06r32_191720_c1 nmdc:mga06r32_191720_c1_717_1586 281
25 3300050512 nmdc:mga0n895_572542_c1 nmdc:mga0n895_572542_c1_177_1046 281
26 3300050515 nmdc:mga0a205_124772_c1 nmdc:mga0a205_124772_c1_214_1083 281
27 3300053119 Ga0500595_026311 Ga0500595_026311_717_1640 281
28 3300053136 Ga0500559_0000036 Ga0500559_0000036_49627_50607 282
29 3300005364 Ga0070673_100469654 Ga0070673_1004696542 283
30 3300025901 Ga0207688_10022428 Ga0207688_100224285 283
31 3300005985 Ga0081539_10097741 Ga0081539_100977412 284
32 3300021384 Ga0213876_10133504 Ga0213876_101335041 284
33 3300039437 Ga0436365_0102668 Ga0436365_0102668_416_1306 284
34 3300039450 Ga0436363_1193847 Ga0436363_1193847_2169_3059 284
35 3300046794 Ga0495589_0120784 Ga0495589_0120784_13_867 284
36 3300045051 Ga0451576_0274814 Ga0451576_0274814_166_1062 285
37 3300005439 Ga0070711_100494667 Ga0070711_1004946671 288
38 3300005536 Ga0070697_100200631 Ga0070697_1002006312 288
39 3300005985 Ga0081539_10000396 Ga0081539_1000039635 288
40 3300005985 Ga0081539_10093149 Ga0081539_100931492 290
41 3300053119 Ga0500595_003230 Ga0500595_003230_60_980 291
42 iso_pu_bacteria 2513237094 2513641280 291
43 iso_pu_bacteria 2585428106 2587917129 291
44 iso_pu_bacteria 2643221640 2644223667 291
45 iso_pu_bacteria 2643221642 2644236245 291
46 iso_pu_bacteria 2928531327 2928531836 291
47 iso_pu_bacteria 2919171160 2919177211 292
48 3300025972 Ga0207668_10150924 Ga0207668_101509242 293
49 iso_pu_bacteria 2838068647 2838069159 293
50 iso_pu_bacteria 2842264693 2842265534 293
51 iso_pu_bacteria 2842422224 2842422349 293
52 iso_pu_bacteria 2842434925 2842435030 293
53 iso_pu_bacteria 2842441272 2842442108 293
54 iso_pu_bacteria 2842447887 2842449488 293
55 iso_pu_bacteria 2842462802 2842466643 293
56 iso_pu_bacteria 2842469257 2842469362 293
57 iso_pu_bacteria 2933599457 2933599824 293
58 iso_pu_bacteria 8005626139 8005628943 293
59 3300005468 Ga0070707_100435261 Ga0070707_1004352611 294
60 3300006237 Ga0097621_100345371 Ga0097621_1003453712 294
61 3300009177 Ga0105248_10164609 Ga0105248_101646092 294
62 iso_pu_bacteria 2599185178 2599446174 294
63 3300028794 Ga0307515_10009357 Ga0307515_100093578 295
64 3300037418 Ga0395900_0359450 Ga0395900_0359450_263_1153 295
65 3300050515 nmdc:mga0a205_189295_c1 nmdc:mga0a205_189295_c1_205_1110 295
66 3300053139 Ga0500568_0003987 Ga0500568_0003987_4137_5024 295
67 iso_pu_bacteria 2900577576 2900581318 295
68 iso_pu_bacteria 2928058823 2928059320 295
69 3300003794 Ga0055531_10001536 Ga0055531_1000153617 296
70 3300005341 Ga0070691_10016754 Ga0070691_100167543 296
71 3300005545 Ga0070695_100011138 Ga0070695_1000111384 296
72 3300005981 Ga0081538_10001078 Ga0081538_1000107832 296
73 3300006042 Ga0075368_10030880 Ga0075368_100308802 296
74 3300006178 Ga0075367_10117002 Ga0075367_101170023 296
75 3300006178 Ga0075367_10124948 Ga0075367_101249483 296
76 3300006195 Ga0075366_10163917 Ga0075366_101639172 296
77 3300006353 Ga0075370_10183229 Ga0075370_101832292 296
78 3300025292 Ga0209676_1000860 Ga0209676_100086042 296
79 3300025303 Ga0209051_1001355 Ga0209051_10013553 296
80 3300025304 Ga0209257_1000651 Ga0209257_100065117 296
81 3300025942 Ga0207689_10080852 Ga0207689_100808524 296
82 3300026118 Ga0207675_100480329 Ga0207675_1004803291 296
83 3300027866 Ga0209813_10012549 Ga0209813_100125492 296
84 3300032126 Ga0307415_100168482 Ga0307415_1001684823 296
85 3300046472 Ga0495580_0041727 Ga0495580_0041727_1013_1903 296
86 3300048905 Ga0496102_0484597 Ga0496102_0484597_97_1029 296
87 3300050490 nmdc:mga03n38_194939_c1 nmdc:mga03n38_194939_c1_127_1017 296
88 3300050494 nmdc:mga06z11_34414_c1 nmdc:mga06z11_34414_c1_1339_2229 296
89 3300050507 nmdc:mga05p37_559299_c1 nmdc:mga05p37_559299_c1_251_1174 296
90 3300053137 Ga0500561_0000001 Ga0500561_0000001_393126_394031 296
91 3300003203 JGI25406J46586_10000608 JGI25406J46586_100006087 297
92 3300005295 Ga0065707_10082454 Ga0065707_100824543 297
93 3300005337 Ga0070682_100035373 Ga0070682_1000353733 297
94 3300005345 Ga0070692_10086333 Ga0070692_100863332 297
95 3300005456 Ga0070678_100436970 Ga0070678_1004369701 297
96 3300005466 Ga0070685_10051351 Ga0070685_100513512 297
97 3300005467 Ga0070706_100008075 Ga0070706_1000080757 297
98 3300005539 Ga0068853_100003335 Ga0068853_10000333510 297
99 3300005539 Ga0068853_100014210 Ga0068853_1000142108 297
100 3300005543 Ga0070672_100416787 Ga0070672_1004167871 297
101 3300005545 Ga0070695_100006289 Ga0070695_1000062896 297
102 3300005563 Ga0068855_100375234 Ga0068855_1003752342 297
103 3300005577 Ga0068857_100027407 Ga0068857_1000274073 297
104 3300005617 Ga0068859_100345744 Ga0068859_1003457441 297
105 3300005981 Ga0081538_10022006 Ga0081538_100220065 297
106 3300005983 Ga0081540_1011598 Ga0081540_10115983 297
107 3300005985 Ga0081539_10001210 Ga0081539_1000121027 297
108 3300006038 Ga0075365_10072565 Ga0075365_100725652 297
109 3300006038 Ga0075365_10076554 Ga0075365_100765543 297
110 3300006038 Ga0075365_10083962 Ga0075365_100839623 297
111 3300006042 Ga0075368_10007166 Ga0075368_100071662 297
112 3300006042 Ga0075368_10095231 Ga0075368_100952312 297
113 3300006051 Ga0075364_10022637 Ga0075364_100226375 297
114 3300006051 Ga0075364_10061963 Ga0075364_100619633 297
115 3300006051 Ga0075364_10132606 Ga0075364_101326061 297
116 3300006177 Ga0075362_10050519 Ga0075362_100505193 297
117 3300006195 Ga0075366_10046262 Ga0075366_100462623 297
118 3300006195 Ga0075366_10073163 Ga0075366_100731632 297
119 3300006353 Ga0075370_10022813 Ga0075370_100228132 297
120 3300006871 Ga0075434_100091745 Ga0075434_1000917452 297
121 3300006931 Ga0097620_100345751 Ga0097620_1003457511 297
122 3300009098 Ga0105245_10574140 Ga0105245_105741401 297
123 3300009147 Ga0114129_10210875 Ga0114129_102108752 297
124 3300009147 Ga0114129_10511757 Ga0114129_105117572 297
125 3300013306 Ga0163162_10059795 Ga0163162_100597953 297
126 3300013308 Ga0157375_10934850 Ga0157375_109348501 297
127 3300014968 Ga0157379_10240371 Ga0157379_102403711 297
128 3300025910 Ga0207684_10001792 Ga0207684_100017927 297
129 3300025912 Ga0207707_10150032 Ga0207707_101500322 297
130 3300025913 Ga0207695_10015319 Ga0207695_1001531910 297
131 3300025914 Ga0207671_10003810 Ga0207671_1000381011 297
132 3300025924 Ga0207694_10003622 Ga0207694_1000362212 297
133 3300025933 Ga0207706_10338893 Ga0207706_103388932 297
134 3300025961 Ga0207712_10298259 Ga0207712_102982592 297
135 3300026035 Ga0207703_10399068 Ga0207703_103990682 297
136 3300026078 Ga0207702_10186570 Ga0207702_101865702 297
137 3300026088 Ga0207641_10030273 Ga0207641_100302734 297
138 3300026089 Ga0207648_10080225 Ga0207648_100802253 297
139 3300026121 Ga0207683_10323299 Ga0207683_103232991 297
140 3300028381 Ga0268264_10071798 Ga0268264_100717982 297
141 3300030733 Ga0314311_1180603 Ga0314311_11806035 297
142 3300030736 Ga0316180_1174351 Ga0316180_11743513 297
143 3300031731 Ga0307405_10013553 Ga0307405_100135533 297
144 3300031911 Ga0307412_10035720 Ga0307412_100357202 297
145 3300032002 Ga0307416_100372373 Ga0307416_1003723732 297
146 3300037471 Ga0395905_0027194 Ga0395905_0027194_2560_3468 297
147 3300041413 Ga0439465_0002919 Ga0439465_0002919_2163_3113 297
148 3300041999 Ga0439433_0003320 Ga0439433_0003320_1880_2830 297
149 3300042002 Ga0439442_001873 Ga0439442_001873_2485_3435 297
150 3300042004 Ga0439445_0001149 Ga0439445_0001149_3728_4678 297
151 3300042006 Ga0439432_002790 Ga0439432_002790_1419_2369 297
152 3300042007 Ga0439449_0000292 Ga0439449_0000292_5483_6421 297
153 3300042007 Ga0439449_0014834 Ga0439449_0014834_1598_2548 297
154 3300042010 Ga0439452_002369 Ga0439452_002369_3215_4165 297
155 3300042014 Ga0439457_003420 Ga0439457_003420_2137_3087 297
156 3300042015 Ga0439462_0006113 Ga0439462_0006113_380_1330 297
157 3300042156 Ga0439446_0004562 Ga0439446_0004562_944_1894 297
158 3300042439 Ga0439464_0000318 Ga0439464_0000318_3872_4786 297
159 3300046492 Ga0495585_0164885 Ga0495585_0164885_168_1064 297
160 3300046520 Ga0495637_0082191 Ga0495637_0082191_289_1182 297
161 3300048903 Ga0496100_0146990 Ga0496100_0146990_543_1439 297
162 3300048907 Ga0496104_0344808 Ga0496104_0344808_207_1103 297
163 3300048909 Ga0496106_0182911 Ga0496106_0182911_200_1096 297
164 3300048910 Ga0496107_0205533 Ga0496107_0205533_229_1125 297
165 3300048915 Ga0496112_0214812 Ga0496112_0214812_744_1640 297
166 3300048917 Ga0496114_0100367 Ga0496114_0100367_842_1738 297
167 3300050489 nmdc:mga03683_33166_c1 nmdc:mga03683_33166_c1_201_1097 297
168 3300050490 nmdc:mga03n38_140326_c1 nmdc:mga03n38_140326_c1_46_942 297
169 3300050491 nmdc:mga00v17_25298_c1 nmdc:mga00v17_25298_c1_898_1794 297
170 3300050492 nmdc:mga0yw44_33622_c1 nmdc:mga0yw44_33622_c1_1309_2205 297
171 3300050496 nmdc:mga07m45_67473_c1 nmdc:mga07m45_67473_c1_659_1585 297
172 3300050507 nmdc:mga05p37_363597_c1 nmdc:mga05p37_363597_c1_646_1557 297
173 iso_pu_bacteria 2643221625 2644141922 297
174 iso_pu_bacteria 2786546940 2788436907 297
175 iso_pu_bacteria 2885192300 2885194221 297
176 3300001915 JGI24741J21665_1000116 JGI24741J21665_10001167 298
177 3300001979 JGI24740J21852_10000211 JGI24740J21852_1000021124 298
178 3300003751 Ga0055538_1003179 Ga0055538_10031792 298
179 3300003751 Ga0055538_1004002 Ga0055538_10040022 298
180 3300003752 Ga0055539_1000117 Ga0055539_10001171 298
181 3300003756 Ga0055533_1001856 Ga0055533_10018562 298
182 3300003756 Ga0055533_1007182 Ga0055533_10071822 298
183 3300003758 Ga0055532_1000025 Ga0055532_10000252 298
184 3300003759 Ga0055525_1000997 Ga0055525_10009971 298
185 3300003761 Ga0055535_1000019 Ga0055535_10000192 298
186 3300003763 Ga0055529_1000035 Ga0055529_1000035205 298
187 3300003841 Ga0055541_1009170 Ga0055541_10091702 298
188 3300005344 Ga0070661_100003800 Ga0070661_1000038008 298
189 3300005455 Ga0070663_100000019 Ga0070663_1000000191 298
190 3300005564 Ga0070664_100000011 Ga0070664_1000000113 298
191 3300005577 Ga0068857_100039857 Ga0068857_1000398572 298
192 3300005578 Ga0068854_100000007 Ga0068854_10000000799 298
193 3300005614 Ga0068856_100001459 Ga0068856_10000145924 298
194 3300005616 Ga0068852_100083015 Ga0068852_1000830153 298
195 3300009036 Ga0105244_10020047 Ga0105244_100200475 298
196 3300009093 Ga0105240_10314666 Ga0105240_103146662 298
197 3300009545 Ga0105237_10038668 Ga0105237_100386684 298
198 3300013100 Ga0157373_10438675 Ga0157373_104386751 298
199 3300013102 Ga0157371_10000033 Ga0157371_100000332 298
200 3300013104 Ga0157370_10000010 Ga0157370_100000102 298
201 3300013105 Ga0157369_10188631 Ga0157369_101886313 298
202 3300020076 Ga0206355_1060024 Ga0206355_10600241 298
203 3300020077 Ga0206351_10066990 Ga0206351_100669903 298
204 3300020610 Ga0154015_1643947 Ga0154015_16439475 298
205 3300025224 Ga0209784_100008 Ga0209784_100008425 298
206 3300025225 Ga0209566_100006 Ga0209566_100006425 298
207 3300025226 Ga0209674_100070 Ga0209674_100070107 298
208 3300025226 Ga0209674_105621 Ga0209674_1056212 298
209 3300025228 Ga0209672_102196 Ga0209672_1021965 298
210 3300025229 Ga0209147_100005 Ga0209147_100005424 298
211 3300025230 Ga0209563_100016 Ga0209563_100016425 298
212 3300025242 Ga0209258_100007 Ga0209258_100007424 298
213 3300025250 Ga0209026_1014009 Ga0209026_10140092 298
214 3300025253 Ga0209677_100008 Ga0209677_100008267 298
215 3300025254 Ga0209148_1007067 Ga0209148_10070672 298
216 3300025256 Ga0209759_1001306 Ga0209759_10013067 298
217 3300025256 Ga0209759_1016296 Ga0209759_10162962 298
218 3300025272 Ga0209455_1000011 Ga0209455_1000011349 298
219 3300025728 Ga0207655_1010540 Ga0207655_10105402 298
220 3300025913 Ga0207695_10003008 Ga0207695_1000300831 298
221 3300025920 Ga0207649_10000279 Ga0207649_1000027935 298
222 3300025945 Ga0207679_10000002 Ga0207679_10000002292 298
223 3300025981 Ga0207640_10000101 Ga0207640_1000010120 298
224 3300026067 Ga0207678_10000043 Ga0207678_1000004377 298
225 3300026078 Ga0207702_10000010 Ga0207702_10000010211 298
226 3300026116 Ga0207674_10016487 Ga0207674_100164877 298
227 3300044650 Ga0466986_0006395 Ga0466986_0006395_4718_5626 298

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00561

Abhydrolase_1

alpha/beta hydrolase fold

70

327

0.86

PF12697

Abhydrolase_6

Alpha/beta hydrolase family

72

333

0.59

Structural Annotation

Top 5 Hits

ID Description Score Start End
3qyj-assembly1.cif.gz_A crystal structure of alr0039, a putative alpha/beta hydrolase from nostoc sp pcc 7120. 0.9535 1 293
4baz-assembly1.cif.gz_A structure of a putative epoxide hydrolase q244e mutant from pseudomonas aeruginosa. 0.9511 4 290
4bau-assembly1.cif.gz_A-2 structure of a putative epoxide hydrolase t131d mutant from pseudomonas aeruginosa, with bound mfa 0.9506 4 290
3qyj-assembly1.cif.gz_A crystal structure of alr0039, a putative alpha/beta hydrolase from nostoc sp pcc 7120. 0.9503 1 293
3r3x-assembly1.cif.gz_B crystal structure of the fluoroacetate dehalogenase rpa1163 - asp110asn/bromoacetate 0.9469 5 292
ID Description Score Start End Superfamily
4bb0A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9593 5 290 3.40.50.1820
4nvrD00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.937 5 290 3.40.50.1820
3b12A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9363 1 290 3.40.50.1820
5k3cA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9325 4 290 3.40.50.1820
4bb0A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9149 5 290 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A435T9B5-F1-model_v4 Alpha/beta hydrolase 0.976 159 294 GO:0016787
AF-A0A7Y8QZE3-F1-model_v4 deleted 0.9589 2 292
AF-A0A520P5N8-F1-model_v4 Alpha/beta hydrolase 0.9585 1 291 GO:0016020
GO:0046464
GO:0047372
AF-A0A7W0ZFJ5-F1-model_v4 Alpha/beta fold hydrolase 0.9568 1 127 GO:0016020
GO:0016787
AF-A0A552F0S2-F1-model_v4 Alpha/beta hydrolase 0.9529 1 290 GO:0016787

Feature Viewer

pLDDT pTM Quality
92.89 0.93 High
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Predicted Structure (AlphaFold2)

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