F340438

General Info

Members Datasets Scaffolds Average Seq Length
227 173 454 280

Family's Representative Sequence

Representative Sequence 3300053730|Ga0500645_011169|Ga0500645_011169_1117_2064
Length 315
Sequence MTAISSKAAAGASGADHAVDATGAKRPCPRIRHPKQRGWTRAQTVIRAVVLGLGAILFLFPFYYMVIGALQKDPDPTLAGAFPNPANLTFDNFVNVNERINLASGLINSGIFTGGVLLCTVIFGVLVGYALAMLKWRGARATFALALLVQVIPFQLLQIPLYVLIARDYGLADTHVGMILPFAINSTAVIIFRQYFLQLPKELFEAARIDGAGEIRLLWSVALPLVRPALVTAVLLTFIGPWNEFLWPFLITKDAALQPLAVSLANYISTVAASTDNPFGAILAGAVVLAAPVVALFIVFQRYFVSSDIGSGVKG

Samples

Sample ID Description Type Environment
1 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
2 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
3 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
7 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
8 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
9 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
11 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
12 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
13 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
14 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
15 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
16 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
17 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
18 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
19 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
20 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
22 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
23 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
24 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
25 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
26 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
27 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
28 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
29 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
30 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
31 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
33 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
34 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
37 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
43 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
44 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
45 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
46 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
47 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
48 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
49 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
50 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
51 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
52 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
53 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
54 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
55 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
56 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
57 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
58 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
59 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
60 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
61 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
62 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
63 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
64 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
65 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
66 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
67 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
68 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
69 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
70 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
71 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
72 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
73 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
74 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
75 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
76 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
77 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
91 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
92 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
95 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
96 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
97 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
98 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
99 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
100 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
101 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
102 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
103 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
104 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
105 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
106 2571042588 Paenibacillus zanthoxyli JH29 Isolate Unclassified
107 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
108 2579778775 Paenibacillus durus P3L-5 Isolate Unclassified
109 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
110 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
111 2643221553 Microbacterium sp. Root553 Isolate Unclassified
112 2643221572 Leifsonia sp. Root60 Isolate Unclassified
113 2643221616 Leifsonia sp. Root227 Isolate Unclassified
114 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
115 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
116 2671180694 Paenibacillus sp. A3 Isolate Unclassified
117 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
118 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
119 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
120 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
121 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
122 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
123 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
124 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
125 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
126 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
127 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
128 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
129 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
130 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
131 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
132 2864997549 Paenibacillus sp. R-72005 Isolate Unclassified
133 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
134 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
135 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
136 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
137 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
138 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
139 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
140 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
141 2889295896 Paenibacillus sp. PvR098 Isolate Rhizosphere
142 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
143 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
144 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
145 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
146 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
147 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
148 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
149 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
150 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
151 2939702853 Paenibacillus sp. PvR008 Isolate Rhizosphere
152 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
153 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
154 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
155 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
156 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
157 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
158 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
159 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
160 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
161 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
162 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
163 2981284811 Paenibacillus sp. PvR052 Isolate Rhizosphere
164 2981289755 Paenibacillus sp. PvR148 Isolate Rhizosphere
165 2981980479 Paenibacillus sp. PvR018 Isolate Rhizosphere
166 2981985349 Paenibacillus sp. PvR053 Isolate Rhizosphere
167 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
168 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
169 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
170 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
171 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
172 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
173 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 67.84
Metatranscriptomes 1.76
Isolates 30.4

Biome Distribution

Category Percentage (%)
Aerial Root 0.44
Bulb 0
Endosphere 16.3
Nodule 0.44
Rhizoplane 4.85
Rhizosphere 45.81
Stem 0
Stem Tuber 0.44
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500645_011169 3300053730 Bacteria 2943
2 JGI25164J39214_1001108 3300002772 Bacteria 7691
3 JGI25165J46597_1000002 3300003214 Bacteria 765387
4 rootH2_10056274 3300003320 Bacteria 6455
5 Ga0006562J51391_1035885 3300003578 Bacteria 6880
6 Ga0006562J51391_1035886 3300003578 Bacteria 5470
7 Ga0055527_1000012 3300003760 Bacteria 348744
8 Ga0055542_1000017 3300003762 Bacteria 348744
9 Ga0055529_1000023 3300003763 Bacteria 314383
10 Ga0065714_10075022 3300005288 Bacteria 2957
11 Ga0065714_10075517 3300005288 Bacteria 2893
12 Ga0070665_100051332 3300005548 Bacteria 4136
13 Ga0081539_10047498 3300005985 Bacteria 2451
14 Ga0075365_10009699 3300006038 Bacteria 5557
15 Ga0075365_10010305 3300006038 Bacteria 5431
16 Ga0075363_100024078 3300006048 Bacteria 3092
17 Ga0075364_10074154 3300006051 Bacteria 2243
18 Ga0075432_10048201 3300006058 Bacteria 1498
19 Ga0075367_10027909 3300006178 Bacteria 3215
20 Ga0075367_10306460 3300006178 Bacteria 1000
21 Ga0075370_10142454 3300006353 Bacteria 1402
22 Ga0075428_100413701 3300006844 Bacteria 1445
23 Ga0105244_10016044 3300009036 Bacteria 4279
24 Ga0105244_10048253 3300009036 Bacteria 2180
25 Ga0111539_10073200 3300009094 Bacteria 4040
26 Ga0105246_10015219 3300011119 Bacteria 4853
27 Ga0157371_10002269 3300013102 Bacteria 18540
28 Ga0157369_10126870 3300013105 Bacteria 2705
29 Ga0157375_10803206 3300013308 Bacteria 1089
30 Ga0157380_10009621 3300014326 Bacteria 6932
31 Ga0157380_10026311 3300014326 Bacteria 4417
32 Ga0163161_10092335 3300017792 Bacteria 2241
33 Ga0206353_10542211 3300020082 Bacteria 1843
34 Ga0224712_10053864 3300022467 Bacteria 1577
35 Ga0209566_100232 3300025225 Bacteria 54034
36 Ga0209566_103190 3300025225 Bacteria 2619
37 Ga0209672_100003 3300025228 Bacteria 1560476
38 Ga0209147_101301 3300025229 Bacteria 9623
39 Ga0207427_100034 3300025231 Bacteria 320342
40 Ga0209437_100429 3300025233 Bacteria 36897
41 Ga0209437_100708 3300025233 Bacteria 17321
42 Ga0209258_103679 3300025242 Bacteria 3200
43 Ga0209148_1000004 3300025254 Bacteria 1844481
44 Ga0209233_1000001 3300025261 Bacteria 2992747
45 Ga0209455_1000022 3300025272 Bacteria 688910
46 Ga0207692_10029386 3300025898 Bacteria 2612
47 Ga0207705_10372413 3300025909 Bacteria 1102
48 Ga0207709_10390859 3300025935 Bacteria 1061
49 Ga0207678_10318389 3300026067 Bacteria 1338
50 Ga0207428_10062624 3300027907 Bacteria 2941
51 Ga0307406_10003781 3300031901 Bacteria 8236
52 Ga0307406_10030091 3300031901 Bacteria 3292
53 Ga0307407_10210522 3300031903 Bacteria 1309
54 Ga0307412_10314103 3300031911 Bacteria 1244
55 Ga0307416_100359822 3300032002 Bacteria 1477
56 Ga0307414_10185051 3300032004 Bacteria 1679
57 Ga0307414_10475341 3300032004 Bacteria 1101
58 Ga0307415_100357964 3300032126 Bacteria 1231
59 Ga0395900_0009418 3300037418 Bacteria 10014
60 Ga0395898_0011190 3300037466 Bacteria 9341
61 Ga0451853_1576141 3300041512 Bacteria 1141
62 Ga0439463_003840 3300042016 Bacteria 3790
63 Ga0439464_0030528 3300042439 Bacteria 1509
64 Ga0466972_0034279 3300044658 Bacteria 2488
65 Ga0466961_0022054 3300044693 Bacteria 4098
66 Ga0466959_0033983 3300045049 Bacteria 3772
67 Ga0466958_0173786 3300045836 Bacteria 1365
68 Ga0495641_0096811 3300046461 Bacteria 1317
69 Ga0495647_0161993 3300046681 Bacteria 965
70 Ga0496100_0063849 3300048903 Bacteria 2435
71 Ga0496102_0079504 3300048905 Bacteria 3020
72 Ga0496104_0125170 3300048907 Bacteria 2468
73 Ga0496105_0045670 3300048908 Bacteria 3614
74 Ga0496105_0235258 3300048908 Bacteria 1488
75 Ga0496114_0001724 3300048917 Bacteria 16598
76 Ga0496114_0021819 3300048917 Bacteria 5211
77 Ga0496114_0047091 3300048917 Bacteria 3585
78 Ga0496115_0004901 3300048918 Bacteria 9714
79 Ga0496115_0017972 3300048918 Bacteria 5417
80 Ga0496115_0250517 3300048918 Bacteria 1458
81 Ga0496116_0034898 3300048919 Bacteria 3539
82 Ga0496116_0244340 3300048919 Bacteria 899
83 Ga0496117_0000028 3300048920 Bacteria 407392
84 Ga0496117_0000174 3300048920 Bacteria 132648
85 Ga0496117_0000731 3300048920 Bacteria 51549
86 Ga0496117_0005632 3300048920 Bacteria 13080
87 Ga0496117_0072708 3300048920 Bacteria 2297
88 Ga0496118_0009586 3300048921 Bacteria 9747
89 Ga0496118_0016163 3300048921 Bacteria 6862
90 Ga0496119_0011457 3300048922 Bacteria 7340
91 Ga0496119_0033099 3300048922 Bacteria 3434
92 Ga0496119_0045697 3300048922 Bacteria 2743
93 Ga0496119_0065264 3300048922 Bacteria 2157
94 Ga0496119_0112364 3300048922 Bacteria 1510
95 Ga0496119_0197187 3300048922 Bacteria 1045
96 Ga0496120_0003170 3300048923 Bacteria 15325
97 Ga0496120_0004210 3300048923 Bacteria 12283
98 Ga0496120_0048032 3300048923 Bacteria 2458
99 Ga0496120_0056115 3300048923 Bacteria 2225
100 Ga0496121_0054338 3300048924 Bacteria 3347
101 Ga0496121_0070057 3300048924 Bacteria 2826
102 Ga0496122_0002117 3300048925 Bacteria 29350
103 Ga0496122_0011831 3300048925 Bacteria 8773
104 Ga0496122_0022672 3300048925 Bacteria 5573
105 Ga0496122_0050879 3300048925 Bacteria 3155
106 Ga0496122_0052327 3300048925 Bacteria 3092
107 Ga0496122_0189475 3300048925 Bacteria 1216
108 Ga0496123_0025768 3300048926 Bacteria 4423
109 Ga0496123_0242532 3300048926 Bacteria 894
110 Ga0496124_0042951 3300048927 Bacteria 3889
111 Ga0496124_0072731 3300048927 Bacteria 2846
112 Ga0496124_0162174 3300048927 Bacteria 1741
113 Ga0496125_0000472 3300048928 Bacteria 71418
114 Ga0496125_0011793 3300048928 Bacteria 8709
115 Ga0496125_0020973 3300048928 Bacteria 6111
116 Ga0496126_0023522 3300048929 Bacteria 5970
117 Ga0496126_0052117 3300048929 Bacteria 3721
118 Ga0496126_0084411 3300048929 Bacteria 2801
119 Ga0496126_0137035 3300048929 Bacteria 2110
120 Ga0496126_0139163 3300048929 Bacteria 2091
121 Ga0501031_0158884 3300049568 Bacteria 1477
122 Ga0501032_0152929 3300049569 Bacteria 1517
123 Ga0501033_0013713 3300049570 Bacteria 6165
124 Ga0501033_0045021 3300049570 Bacteria 3285
125 Ga0501034_0018268 3300049571 Bacteria 7192
126 Ga0501034_0114367 3300049571 Bacteria 2687
127 Ga0501036_0043995 3300049572 Bacteria 3781
128 Ga0501037_0144458 3300049573 Bacteria 1702
129 Ga0501037_0224457 3300049573 Bacteria 1320
130 Ga0501038_0040942 3300049574 Bacteria 4042
131 Ga0501039_0061920 3300049575 Bacteria 2898
132 Ga0501042_0093921 3300049578 Bacteria 2154
133 Ga0501043_0067126 3300049579 Bacteria 2817
134 Ga0501046_0013919 3300049580 Bacteria 6794
135 Ga0501046_0044020 3300049580 Bacteria 3551
136 Ga0501046_0186899 3300049580 Bacteria 1547
137 Ga0501047_0008483 3300049581 Bacteria 9694
138 Ga0501048_0041561 3300049582 Bacteria 3292
139 Ga0501070_0040105 3300049586 Bacteria 3905
140 Ga0501074_0025275 3300049590 Bacteria 4314
141 Ga0501035_0067037 3300049822 Bacteria 3185
142 Ga0501044_0040092 3300049823 Bacteria 4883
143 Ga0501044_0200974 3300049823 Bacteria 1951
144 Ga0501045_0059905 3300049824 Bacteria 2790
145 nmdc:mga03n38_53264_c1 3300050490 Bacteria 1814
146 nmdc:mga00v17_249338_c1 3300050491 Bacteria 1151
147 nmdc:mga0yw44_308301_c1 3300050492 Bacteria 1062
148 nmdc:mga06z11_118980_c1 3300050494 Bacteria 1472
149 nmdc:mga04h51_109755_c1 3300050495 Bacteria 1016
150 nmdc:mga07m45_73443_c1 3300050496 Bacteria 1947
151 nmdc:mga08y16_154523_c1 3300050511 Bacteria 2385
152 Ga0500635_0000023 3300053080 Bacteria 108024
153 Ga0500559_0000202 3300053136 Bacteria 47695
154 Ga0500559_0021665 3300053136 Bacteria 2725
155 Ga0500559_0077527 3300053136 Bacteria 1506
156 Ga0500573_0000005 3300053140 Bacteria 315762
157 Ga0500573_0036999 3300053140 Bacteria 2819
158 Ga0500577_0002977 3300053142 Bacteria 4366
159 2573041552 2571042588 Bacteria 5045676
160 2578336409 2576861424 Bacteria 5270569
161 2580931749 2579778775 Bacteria 5360914
162 2621274597 2619619294 Bacteria 5575484
163 2643739643 2643221543 Bacteria 6628015
164 2643783732 2643221553 Bacteria 3544260
165 2643876978 2643221572 Bacteria 3614809
166 2644095609 2643221616 Bacteria 4066575
167 2644384033 2643221669 Bacteria 3611286
168 2644678280 2643221724 Bacteria 3593515
169 2673820364 2671180694 Bacteria 7506943
170 2723602793 2721755693 Bacteria 6126117
171 2730138771 2728369359 Bacteria 5621728
172 2730231291 2728369380 Bacteria 3620317
173 2753809499 2751185905 Bacteria 6142767
174 2758224578 2757320536 Bacteria 3629334
175 2802436674 2802428803 Bacteria 5806948
176 2809226674 2808606447 Bacteria 3572005
177 2812322237 2811994872 Bacteria 4121241
178 2821115785 2821111986 Bacteria 6894338
179 2821269190 2821268502 Bacteria 3750023
180 2833710090 2833709550 Bacteria 4008291
181 2852632884 2852632344 Bacteria 3463163
182 2852649165 2852646457 Bacteria 3408613
183 2852663449 2852663356 Bacteria 4090475
184 2857726582 2857723135 Bacteria 4217853
185 2864999710 2864997549 Bacteria 5139696
186 2881639636 2881636855 Bacteria 5205297
187 2884764989 2884763398 Bacteria 4091164
188 2885531322 2885526491 Bacteria 7164189
189 2887443791 2887443736 Bacteria 4426037
190 2888584004 2888578766 Bacteria 6743310
191 2889043894 2889042446 Bacteria 7618936
192 2889054412 2889049205 Bacteria 7524325
193 2889278753 2889276214 Bacteria 5979355
194 2889300086 2889295896 Bacteria 4704906
195 2895662242 2895660088 Bacteria 3782833
196 2904166410 2904162308 Bacteria 7086713
197 2904494913 2904490793 Bacteria 7046938
198 2904598656 2904595352 Bacteria 6124848
199 2919163865 2919160200 Bacteria 6929020
200 2919444889 2919443155 Bacteria 4072969
201 2929210815 2929206907 Bacteria 5918291
202 2929212078 2929206907 Bacteria 5918291
203 2931387356 2931384279 Bacteria 7299545
204 2939661542 2939660829 Bacteria 3784848
205 2939703764 2939702853 Bacteria 5139229
206 2945969590 2945968032 Bacteria 4111363
207 2945994067 2945991243 Bacteria 7008369
208 2946056822 2946053406 Bacteria 6978655
209 2946083264 2946080515 Bacteria 4310960
210 2966926656 2966924647 Bacteria 3268643
211 2971512929 2971511577 Bacteria 5404012
212 2974298217 2974294766 Bacteria 3767688
213 2974325551 2974324384 Bacteria 3750535
214 2977265725 2977264416 Bacteria 3750737
215 2980129402 2980125574 Bacteria 5567337
216 2980181485 2980176882 Bacteria 5397533
217 2981286823 2981284811 Bacteria 4641497
218 2981291774 2981289755 Bacteria 4641509
219 2981982462 2981980479 Bacteria 4641628
220 2981987753 2981985349 Bacteria 4641497
221 2984529619 2984527788 Bacteria 5288478
222 648169126 648028048 Bacteria 5394884
223 8004183856 8004182704 Bacteria 3391155
224 8016254877 8016254467 Bacteria 3797036
225 8054796999 8054795415 Bacteria 9785225
226 8056038807 8056037122 Bacteria 3854319
227 8057346463 8057345674 Bacteria 4160394
228 Ga0500645_011169
229 JGI25164J39214_1001108
230 JGI25165J46597_1000002
231 rootH2_10056274
232 Ga0006562J51391_1035885
233 Ga0006562J51391_1035886
234 Ga0055527_1000012
235 Ga0055542_1000017
236 Ga0055529_1000023
237 Ga0065714_10075022
238 Ga0065714_10075517
239 Ga0070665_100051332
240 Ga0081539_10047498
241 Ga0075365_10009699
242 Ga0075365_10010305
243 Ga0075363_100024078
244 Ga0075364_10074154
245 Ga0075432_10048201
246 Ga0075367_10027909
247 Ga0075367_10306460
248 Ga0075370_10142454
249 Ga0075428_100413701
250 Ga0105244_10016044
251 Ga0105244_10048253
252 Ga0111539_10073200
253 Ga0105246_10015219
254 Ga0157371_10002269
255 Ga0157369_10126870
256 Ga0157375_10803206
257 Ga0157380_10009621
258 Ga0157380_10026311
259 Ga0163161_10092335
260 Ga0206353_10542211
261 Ga0224712_10053864
262 Ga0209566_100232
263 Ga0209566_103190
264 Ga0209672_100003
265 Ga0209147_101301
266 Ga0207427_100034
267 Ga0209437_100429
268 Ga0209437_100708
269 Ga0209258_103679
270 Ga0209148_1000004
271 Ga0209233_1000001
272 Ga0209455_1000022
273 Ga0207692_10029386
274 Ga0207705_10372413
275 Ga0207709_10390859
276 Ga0207678_10318389
277 Ga0207428_10062624
278 Ga0307406_10003781
279 Ga0307406_10030091
280 Ga0307407_10210522
281 Ga0307412_10314103
282 Ga0307416_100359822
283 Ga0307414_10185051
284 Ga0307414_10475341
285 Ga0307415_100357964
286 Ga0395900_0009418
287 Ga0395898_0011190
288 Ga0451853_1576141
289 Ga0439463_003840
290 Ga0439464_0030528
291 Ga0466972_0034279
292 Ga0466961_0022054
293 Ga0466959_0033983
294 Ga0466958_0173786
295 Ga0495641_0096811
296 Ga0495647_0161993
297 Ga0496100_0063849
298 Ga0496102_0079504
299 Ga0496104_0125170
300 Ga0496105_0045670
301 Ga0496105_0235258
302 Ga0496114_0001724
303 Ga0496114_0021819
304 Ga0496114_0047091
305 Ga0496115_0004901
306 Ga0496115_0017972
307 Ga0496115_0250517
308 Ga0496116_0034898
309 Ga0496116_0244340
310 Ga0496117_0000028
311 Ga0496117_0000174
312 Ga0496117_0000731
313 Ga0496117_0005632
314 Ga0496117_0072708
315 Ga0496118_0009586
316 Ga0496118_0016163
317 Ga0496119_0011457
318 Ga0496119_0033099
319 Ga0496119_0045697
320 Ga0496119_0065264
321 Ga0496119_0112364
322 Ga0496119_0197187
323 Ga0496120_0003170
324 Ga0496120_0004210
325 Ga0496120_0048032
326 Ga0496120_0056115
327 Ga0496121_0054338
328 Ga0496121_0070057
329 Ga0496122_0002117
330 Ga0496122_0011831
331 Ga0496122_0022672
332 Ga0496122_0050879
333 Ga0496122_0052327
334 Ga0496122_0189475
335 Ga0496123_0025768
336 Ga0496123_0242532
337 Ga0496124_0042951
338 Ga0496124_0072731
339 Ga0496124_0162174
340 Ga0496125_0000472
341 Ga0496125_0011793
342 Ga0496125_0020973
343 Ga0496126_0023522
344 Ga0496126_0052117
345 Ga0496126_0084411
346 Ga0496126_0137035
347 Ga0496126_0139163
348 Ga0501031_0158884
349 Ga0501032_0152929
350 Ga0501033_0013713
351 Ga0501033_0045021
352 Ga0501034_0018268
353 Ga0501034_0114367
354 Ga0501036_0043995
355 Ga0501037_0144458
356 Ga0501037_0224457
357 Ga0501038_0040942
358 Ga0501039_0061920
359 Ga0501042_0093921
360 Ga0501043_0067126
361 Ga0501046_0013919
362 Ga0501046_0044020
363 Ga0501046_0186899
364 Ga0501047_0008483
365 Ga0501048_0041561
366 Ga0501070_0040105
367 Ga0501074_0025275
368 Ga0501035_0067037
369 Ga0501044_0040092
370 Ga0501044_0200974
371 Ga0501045_0059905
372 nmdc:mga03n38_53264_c1
373 nmdc:mga00v17_249338_c1
374 nmdc:mga0yw44_308301_c1
375 nmdc:mga06z11_118980_c1
376 nmdc:mga04h51_109755_c1
377 nmdc:mga07m45_73443_c1
378 nmdc:mga08y16_154523_c1
379 Ga0500635_0000023
380 Ga0500559_0000202
381 Ga0500559_0021665
382 Ga0500559_0077527
383 Ga0500573_0000005
384 Ga0500573_0036999
385 Ga0500577_0002977
386 2573041552
387 2578336409
388 2580931749
389 2621274597
390 2643739643
391 2643783732
392 2643876978
393 2644095609
394 2644384033
395 2644678280
396 2673820364
397 2723602793
398 2730138771
399 2730231291
400 2753809499
401 2758224578
402 2802436674
403 2809226674
404 2812322237
405 2821115785
406 2821269190
407 2833710090
408 2852632884
409 2852649165
410 2852663449
411 2857726582
412 2864999710
413 2881639636
414 2884764989
415 2885531322
416 2887443791
417 2888584004
418 2889043894
419 2889054412
420 2889278753
421 2889300086
422 2895662242
423 2904166410
424 2904494913
425 2904598656
426 2919163865
427 2919444889
428 2929210815
429 2929212078
430 2931387356
431 2939661542
432 2939703764
433 2945969590
434 2945994067
435 2946056822
436 2946083264
437 2966926656
438 2971512929
439 2974298217
440 2974325551
441 2977265725
442 2980129402
443 2980181485
444 2981286823
445 2981291774
446 2981982462
447 2981987753
448 2984529619
449 648169126
450 8004183856
451 8016254877
452 8054796999
453 8056038807
454 8057346463

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

121

307

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
8hpn-assembly1.cif.gz_B lpqy-sugabc in state 3 0.8265 23 286
8hpr-assembly1.cif.gz_B lpqy-sugabc in state 4 0.8218 23 283
8hpr-assembly1.cif.gz_B lpqy-sugabc in state 4 0.8189 23 283
3rlf-assembly1.cif.gz_G crystal structure of the maltose-binding protein/maltose transporter complex in an outward-facing conformation bound to mgamppnp 0.8167 27 298
8hpn-assembly1.cif.gz_B lpqy-sugabc in state 3 0.8126 23 286
ID Description Score Start End Superfamily
af_I6Y1U3_2_266_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9097 24 286 1.10.3720.10
af_L7N652_1_266_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9074 16 287 1.10.3720.10
af_O53483_6_271_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8988 25 287 1.10.3720.10
af_L7N652_1_266_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8977 16 287 1.10.3720.10
af_I6Y1U3_2_266_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8871 24 286 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A7W0KYI5-F1-model_v4 Carbohydrate ABC transporter permease 0.9361 49 298 GO:0005886
GO:0055085
AF-A0A5J6L1H0-F1-model_v4 Carbohydrate ABC transporter permease 0.9356 25 298 GO:0005886
GO:0055085
AF-A0A124G9H2-F1-model_v4 Sugar ABC transporter permease 0.9356 29 298 GO:0005886
GO:0055085
AF-A0A2D6CVB4-F1-model_v4 ABC transmembrane type-1 domain-containing protein 0.9356 74 287 GO:0005886
GO:0055085
AF-A0A7V9G9F2-F1-model_v4 ABC transporter permease subunit 0.9338 74 287 GO:0005886
GO:0055085

Map