F339978

General Info

Members Datasets Scaffolds Average Seq Length
227 140 454 472

Family's Representative Sequence

Representative Sequence 3300024227|Ga0228598_1000293|Ga0228598_10002931
Length 505
Sequence MRWTVGHVAEALGVAAPARLDALAGLAGVSIDSRTIQPGELFIAIHGPSHDGHDHVAAALAGGAAAGVVARARFARYLEEIRGKLFAVDDTLDALHRLASRACAIWRAAKPGRKIGGVAGSVGKTTTKEIFAALVAARFRVLKTQGNLNNEYGLPLTLLQLDDRHDAAVIEMGMSHRGELARLARIAPPDVGVITRIAVEHLEFFSSIDEIALAERELIENLAWPDATAVLNADDERVERFAEVARGRVLWFSTSADARRGAGAGGSARAEFRAEKIEERGVSGSAFDFVTPGGRTRLELPLIGRHNVMNGVAALAAASVWGIGAEDAQRVFPQLQPADKRGEVVKFEEGFTVINDSYNSSPTALNALAELLAATPGFARRILAAGEMRELGESAPDLHRECGRFVAGLRKIDWIVGVQGPAEEFVRAAVAAGHPAERTKFFQNSAEAGDFLAQFIKPNDLLLLKGSRGVKMEKILEAIDASHARSGAQANANAEHAAAQPKGQR

Samples

Sample ID Description Type Environment
1 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
4 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
5 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
17 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
25 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
31 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
32 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
35 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
39 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
40 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
43 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
57 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
59 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
60 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
61 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
62 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
63 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
64 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
65 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
66 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
67 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
68 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
69 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
70 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
71 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
72 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
73 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
74 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
75 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
76 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
77 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
78 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
79 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
80 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
81 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
82 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
83 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
86 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
87 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
88 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
89 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
90 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
91 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
92 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
93 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
94 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
95 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
96 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
97 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
98 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
99 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
100 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
101 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
102 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
103 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
104 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
105 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
106 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
107 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
108 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
109 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
110 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
111 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
112 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
113 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
114 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
115 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
116 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
117 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
118 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
119 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
120 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
121 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
122 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
123 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
124 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
125 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
126 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
127 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
128 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
129 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
130 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
132 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
133 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
134 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
135 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
136 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
137 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
138 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
139 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
140 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.68
Metatranscriptomes 1.32
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.44
Nodule 0
Rhizoplane 0.44
Rhizosphere 98.68
Stem 0
Stem Tuber 0
Unclassified 7.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0228598_1000293 3300024227 Bacteria 9712
2 Ga0070680_100018315 3300005336 Bacteria 5532
3 Ga0070673_100021530 3300005364 Bacteria 4676
4 Ga0070688_100142724 3300005365 Bacteria 1629
5 Ga0070703_10001480 3300005406 Bacteria 7060
6 Ga0070709_10003270 3300005434 Bacteria 8710
7 Ga0070709_10040084 3300005434 Bacteria 2877
8 Ga0070713_100013627 3300005436 Bacteria 6012
9 Ga0070711_100011314 3300005439 Bacteria 5538
10 Ga0070711_100084748 3300005439 Bacteria 2268
11 Ga0070694_100001117 3300005444 Bacteria 15354
12 Ga0070706_100007518 3300005467 Bacteria 10211
13 Ga0070707_100000272 3300005468 Bacteria 51273
14 Ga0070707_100000399 3300005468 Bacteria 42939
15 Ga0070707_100114056 3300005468 Unclassified 2622
16 Ga0070707_100252069 3300005468 Unclassified 1718
17 Ga0070698_100046574 3300005471 Bacteria 4433
18 Ga0070699_100035202 3300005518 Bacteria 4328
19 Ga0070699_100148537 3300005518 Bacteria 2072
20 Ga0070679_100032880 3300005530 Bacteria 5133
21 Ga0070697_100009840 3300005536 Bacteria 7457
22 Ga0070697_100012849 3300005536 Bacteria 6560
23 Ga0070672_100097736 3300005543 Bacteria 2377
24 Ga0070695_100000842 3300005545 Bacteria 16570
25 Ga0070696_100001148 3300005546 Bacteria 17171
26 Ga0070693_100000160 3300005547 Bacteria 30875
27 Ga0070665_100002111 3300005548 Bacteria 22209
28 Ga0070664_100105607 3300005564 Bacteria 2453
29 Ga0068857_100026778 3300005577 Bacteria 5084
30 Ga0068859_100041387 3300005617 Bacteria 4628
31 Ga0070716_100000121 3300006173 Bacteria 30983
32 Ga0075367_10005192 3300006178 Bacteria 6434
33 Ga0075428_100000983 3300006844 Bacteria 30193
34 Ga0075428_100007093 3300006844 Bacteria 12407
35 Ga0075428_100045235 3300006844 Bacteria 4837
36 Ga0075430_100210776 3300006846 Bacteria 1612
37 Ga0075433_10037974 3300006852 Bacteria 4157
38 Ga0075434_100023005 3300006871 Bacteria 6067
39 Ga0075429_100002299 3300006880 Bacteria 16034
40 Ga0068865_100076578 3300006881 Bacteria 2388
41 Ga0075436_100003359 3300006914 Bacteria 10956
42 Ga0075436_100005105 3300006914 Bacteria 9033
43 Ga0075436_100021403 3300006914 Bacteria 4440
44 Ga0075436_100106291 3300006914 Bacteria 1958
45 Ga0097620_100041388 3300006931 Bacteria 4628
46 Ga0075435_100020044 3300007076 Bacteria 5114
47 Ga0099794_10004973 3300007265 Bacteria 5288
48 Ga0105240_10021847 3300009093 Bacteria 8502
49 Ga0105240_10043901 3300009093 Bacteria 5685
50 Ga0114129_10000254 3300009147 Bacteria 60253
51 Ga0114129_10041291 3300009147 Bacteria 6501
52 Ga0114129_10066366 3300009147 Bacteria 5034
53 Ga0099796_10001497 3300010159 Bacteria 4729
54 Ga0099796_10001887 3300010159 Bacteria 4430
55 Ga0157374_10077978 3300013296 Bacteria 3137
56 Ga0157378_10023622 3300013297 Bacteria 5408
57 Ga0157375_10079627 3300013308 Bacteria 3312
58 Ga0157376_10015062 3300014969 Bacteria 5829
59 Ga0228598_1003923 3300024227 Bacteria 3174
60 Ga0207653_10005199 3300025885 Bacteria 4067
61 Ga0207699_10001312 3300025906 Bacteria 11824
62 Ga0207699_10048232 3300025906 Bacteria 2501
63 Ga0207684_10002403 3300025910 Bacteria 18935
64 Ga0207695_10079538 3300025913 Bacteria 3322
65 Ga0207693_10007605 3300025915 Bacteria 8901
66 Ga0207660_10012146 3300025917 Bacteria 5629
67 Ga0207652_10028555 3300025921 Bacteria 4656
68 Ga0207646_10000294 3300025922 Bacteria 67765
69 Ga0207646_10000586 3300025922 Bacteria 47556
70 Ga0207646_10001298 3300025922 Bacteria 31112
71 Ga0207687_10068259 3300025927 Bacteria 2532
72 Ga0207700_10007933 3300025928 Bacteria 6535
73 Ga0207700_10009179 3300025928 Bacteria 6164
74 Ga0207700_10148593 3300025928 Unclassified 1934
75 Ga0207665_10000014 3300025939 Bacteria 137803
76 Ga0207665_10024685 3300025939 Bacteria 3964
77 Ga0207665_10029459 3300025939 Bacteria 3628
78 Ga0207651_10013547 3300025960 Bacteria 4671
79 Ga0209588_1010568 3300027671 Bacteria 2777
80 Ga0265354_1000040 3300028016 Bacteria 20750
81 Ga0268266_10001848 3300028379 Bacteria 23892
82 Ga0265319_1000537 3300028563 Bacteria 25933
83 Ga0265318_10001648 3300028577 Bacteria 12870
84 Ga0265338_10031332 3300028800 Bacteria 5216
85 Ga0265338_10105904 3300028800 Bacteria 2278
86 Ga0265338_10114670 3300028800 Unclassified 2162
87 Ga0265770_1000878 3300030878 Bacteria 4161
88 Ga0265760_10000055 3300031090 Bacteria 32416
89 Ga0265760_10017787 3300031090 Bacteria 2042
90 Ga0265330_10014795 3300031235 Bacteria 3619
91 Ga0265332_10002888 3300031238 Bacteria 8492
92 Ga0265328_10033585 3300031239 Unclassified 1902
93 Ga0265320_10002497 3300031240 Bacteria 12791
94 Ga0265320_10024473 3300031240 Bacteria 3194
95 Ga0265325_10006781 3300031241 Bacteria 6926
96 Ga0265325_10013458 3300031241 Bacteria 4658
97 Ga0265325_10068592 3300031241 Unclassified 1785
98 Ga0265329_10000689 3300031242 Bacteria 17248
99 Ga0265340_10024316 3300031247 Bacteria 3078
100 Ga0265339_10000708 3300031249 Bacteria 25868
101 Ga0265339_10055779 3300031249 Bacteria 2142
102 Ga0265331_10000021 3300031250 Bacteria 242632
103 Ga0265331_10001174 3300031250 Bacteria 19979
104 Ga0265331_10015593 3300031250 Bacteria 4007
105 Ga0265316_10006847 3300031344 Bacteria 10822
106 Ga0265316_10038831 3300031344 Bacteria 3830
107 Ga0265313_10002982 3300031595 Bacteria 14113
108 Ga0265313_10015412 3300031595 Bacteria 4451
109 Ga0265313_10021184 3300031595 Bacteria 3561
110 Ga0265314_10009808 3300031711 Bacteria 8041
111 Ga0265342_10000032 3300031712 Bacteria 150633
112 Ga0373923_0015249 3300035111 Unclassified 2899
113 Ga0373954_0021522 3300035118 Unclassified 2921
114 Ga0373943_0030278 3300035170 Bacteria 2560
115 Ga0373955_0128614 3300035172 Bacteria 1477
116 Ga0373927_0000497 3300035695 Bacteria 29917
117 Ga0373933_0009155 3300035724 Bacteria 5404
118 Ga0373933_0094780 3300035724 Unclassified 1846
119 Ga0373937_0000071 3300036401 Bacteria 92562
120 Ga0373937_0008961 3300036401 Bacteria 8688
121 Ga0373937_0119599 3300036401 Unclassified 2454
122 Ga0373925_0001873 3300037068 Bacteria 17476
123 Ga0395900_0261140 3300037418 Bacteria 1730
124 Ga0436365_0530989 3300039437 Bacteria 9091
125 Ga0451577_0000129 3300042876 Bacteria 167794
126 Ga0451577_0002021 3300042876 Bacteria 25151
127 Ga0451577_0022284 3300042876 Bacteria 5785
128 Ga0453683_0001644 3300044673 Bacteria 18745
129 Ga0453683_0002452 3300044673 Bacteria 14370
130 Ga0453683_0005496 3300044673 Bacteria 8841
131 Ga0453684_0000411 3300044712 Bacteria 175523
132 Ga0453684_0005943 3300044712 Bacteria 23673
133 Ga0453684_0038818 3300044712 Bacteria 6499
134 Ga0495592_0031086 3300046454 Bacteria 4037
135 Ga0495603_0034596 3300046455 Bacteria 3037
136 Ga0495629_0054432 3300046459 Bacteria 2798
137 Ga0495638_0015699 3300046460 Bacteria 5080
138 Ga0495641_0041546 3300046461 Bacteria 2136
139 Ga0495651_0012292 3300046462 Bacteria 6597
140 Ga0495651_0014445 3300046462 Bacteria 6104
141 Ga0495651_0021585 3300046462 Bacteria 5004
142 Ga0495651_0052194 3300046462 Bacteria 3149
143 Ga0495653_0026090 3300046463 Unclassified 4689
144 Ga0495580_0001322 3300046472 Bacteria 21865
145 Ga0495580_0017932 3300046472 Bacteria 5280
146 Ga0495580_0042555 3300046472 Bacteria 3236
147 Ga0495580_0089519 3300046472 Bacteria 2143
148 Ga0495580_0156568 3300046472 Bacteria 1577
149 Ga0495582_0000161 3300046473 Bacteria 36312
150 Ga0495639_0016902 3300046475 Bacteria 3169
151 Ga0495662_0021094 3300046476 Bacteria 3151
152 Ga0495608_0005269 3300046511 Bacteria 9239
153 Ga0495608_0035262 3300046511 Bacteria 3375
154 Ga0495618_0095726 3300046514 Bacteria 1899
155 Ga0495628_0050090 3300046516 Bacteria 3305
156 Ga0495630_0012570 3300046517 Bacteria 6152
157 Ga0495630_0045121 3300046517 Unclassified 3293
158 Ga0495630_0067962 3300046517 Bacteria 2679
159 Ga0495630_0117903 3300046517 Bacteria 2013
160 Ga0495652_0002087 3300046529 Bacteria 21124
161 Ga0495640_0031972 3300046533 Bacteria 3752
162 Ga0495640_0033230 3300046533 Unclassified 3667
163 Ga0495586_0005927 3300046535 Bacteria 6541
164 Ga0495587_0000498 3300046536 Bacteria 27366
165 Ga0495587_0001224 3300046536 Bacteria 16987
166 Ga0495587_0027262 3300046536 Bacteria 3479
167 Ga0495587_0127498 3300046536 Bacteria 1455
168 Ga0495645_0005808 3300046543 Bacteria 8515
169 Ga0495645_0016149 3300046543 Bacteria 5323
170 Ga0495645_0021280 3300046543 Bacteria 4687
171 Ga0495645_0023627 3300046543 Bacteria 4454
172 Ga0495634_0044865 3300046642 Bacteria 2990
173 Ga0495634_0164683 3300046642 Unclassified 1396
174 Ga0495635_0003073 3300046663 Bacteria 11486
175 Ga0495635_0127588 3300046663 Unclassified 1734
176 Ga0495657_0023509 3300046675 Bacteria 4402
177 Ga0495657_0045953 3300046675 Unclassified 2960
178 Ga0495599_0002778 3300046678 Bacteria 10204
179 Ga0495623_0007740 3300046679 Bacteria 6983
180 Ga0495646_0080286 3300046680 Bacteria 1902
181 Ga0495647_0004756 3300046681 Bacteria 4431
182 Ga0495658_0009606 3300046683 Bacteria 4823
183 Ga0495658_0017162 3300046683 Bacteria 3736
184 Ga0495613_0014054 3300046689 Bacteria 5940
185 Ga0495613_0084950 3300046689 Bacteria 2297
186 Ga0495600_0008677 3300046809 Bacteria 6255
187 Ga0495600_0019763 3300046809 Bacteria 4305
188 Ga0495581_0136761 3300047315 Bacteria 1428
189 Ga0495604_0011346 3300047317 Bacteria 7071
190 Ga0495604_0015975 3300047317 Bacteria 5993
191 Ga0495604_0022028 3300047317 Bacteria 5087
192 Ga0495674_0002456 3300047319 Bacteria 18112
193 Ga0495674_0039448 3300047319 Bacteria 4233
194 Ga0495674_0074379 3300047319 Bacteria 2926
195 Ga0495676_0016069 3300047321 Bacteria 6649
196 Ga0495680_0000126 3300047322 Bacteria 75130
197 Ga0495680_0004585 3300047322 Bacteria 13178
198 Ga0495680_0005681 3300047322 Bacteria 11675
199 Ga0495675_0000296 3300047444 Bacteria 35737
200 Ga0495675_0001857 3300047444 Bacteria 12577
201 Ga0495675_0004827 3300047444 Bacteria 8199
202 Ga0495675_0008778 3300047444 Bacteria 6275
203 Ga0495675_0017932 3300047444 Bacteria 4488
204 Ga0495684_0002211 3300047471 Bacteria 15579
205 Ga0495684_0007631 3300047471 Bacteria 8370
206 Ga0495684_0121116 3300047471 Bacteria 1970
207 Ga0495593_0004009 3300047673 Bacteria 8776
208 Ga0495602_0000427 3300048088 Bacteria 39519
209 Ga0495602_0019953 3300048088 Bacteria 6636
210 Ga0495614_0007365 3300048089 Bacteria 4901
211 Ga0496104_0094822 3300048907 Bacteria 2855
212 Ga0501042_0106767 3300049578 Bacteria 2016
213 Ga0501076_0061048 3300049592 Bacteria 3000
214 nmdc:mga05p37_2475_c1 3300050507 Bacteria 21484
215 nmdc:mga05p37_44984_c1 3300050507 Bacteria 5431
216 nmdc:mga09592_95301_c1 3300050508 Bacteria 2546
217 nmdc:mga09592_964_c1 3300050508 Bacteria 22704
218 nmdc:mga0qj67_86992_c1 3300050509 Bacteria 2507
219 nmdc:mga0n895_42541_c1 3300050512 Unclassified 4420
220 nmdc:mga0n895_77735_c1 3300050512 Bacteria 3302
221 nmdc:mga0rr50_47772_c1 3300050513 Bacteria 3160
222 nmdc:mga08x19_3010_c1 3300050514 Bacteria 10130
223 nmdc:mga08x19_73414_c1 3300050514 Bacteria 2233
224 nmdc:mga08x19_9047_c1 3300050514 Bacteria 5945
225 nmdc:mga0a205_11753_c1 3300050515 Bacteria 8076
226 Ga0495601_0084014 3300053077 Unclassified 2045
227 Ga0495612_0004688 3300053078 Bacteria 5662
228 Ga0228598_1000293
229 Ga0070680_100018315
230 Ga0070673_100021530
231 Ga0070688_100142724
232 Ga0070703_10001480
233 Ga0070709_10003270
234 Ga0070709_10040084
235 Ga0070713_100013627
236 Ga0070711_100011314
237 Ga0070711_100084748
238 Ga0070694_100001117
239 Ga0070706_100007518
240 Ga0070707_100000272
241 Ga0070707_100000399
242 Ga0070707_100114056
243 Ga0070707_100252069
244 Ga0070698_100046574
245 Ga0070699_100035202
246 Ga0070699_100148537
247 Ga0070679_100032880
248 Ga0070697_100009840
249 Ga0070697_100012849
250 Ga0070672_100097736
251 Ga0070695_100000842
252 Ga0070696_100001148
253 Ga0070693_100000160
254 Ga0070665_100002111
255 Ga0070664_100105607
256 Ga0068857_100026778
257 Ga0068859_100041387
258 Ga0070716_100000121
259 Ga0075367_10005192
260 Ga0075428_100000983
261 Ga0075428_100007093
262 Ga0075428_100045235
263 Ga0075430_100210776
264 Ga0075433_10037974
265 Ga0075434_100023005
266 Ga0075429_100002299
267 Ga0068865_100076578
268 Ga0075436_100003359
269 Ga0075436_100005105
270 Ga0075436_100021403
271 Ga0075436_100106291
272 Ga0097620_100041388
273 Ga0075435_100020044
274 Ga0099794_10004973
275 Ga0105240_10021847
276 Ga0105240_10043901
277 Ga0114129_10000254
278 Ga0114129_10041291
279 Ga0114129_10066366
280 Ga0099796_10001497
281 Ga0099796_10001887
282 Ga0157374_10077978
283 Ga0157378_10023622
284 Ga0157375_10079627
285 Ga0157376_10015062
286 Ga0228598_1003923
287 Ga0207653_10005199
288 Ga0207699_10001312
289 Ga0207699_10048232
290 Ga0207684_10002403
291 Ga0207695_10079538
292 Ga0207693_10007605
293 Ga0207660_10012146
294 Ga0207652_10028555
295 Ga0207646_10000294
296 Ga0207646_10000586
297 Ga0207646_10001298
298 Ga0207687_10068259
299 Ga0207700_10007933
300 Ga0207700_10009179
301 Ga0207700_10148593
302 Ga0207665_10000014
303 Ga0207665_10024685
304 Ga0207665_10029459
305 Ga0207651_10013547
306 Ga0209588_1010568
307 Ga0265354_1000040
308 Ga0268266_10001848
309 Ga0265319_1000537
310 Ga0265318_10001648
311 Ga0265338_10031332
312 Ga0265338_10105904
313 Ga0265338_10114670
314 Ga0265770_1000878
315 Ga0265760_10000055
316 Ga0265760_10017787
317 Ga0265330_10014795
318 Ga0265332_10002888
319 Ga0265328_10033585
320 Ga0265320_10002497
321 Ga0265320_10024473
322 Ga0265325_10006781
323 Ga0265325_10013458
324 Ga0265325_10068592
325 Ga0265329_10000689
326 Ga0265340_10024316
327 Ga0265339_10000708
328 Ga0265339_10055779
329 Ga0265331_10000021
330 Ga0265331_10001174
331 Ga0265331_10015593
332 Ga0265316_10006847
333 Ga0265316_10038831
334 Ga0265313_10002982
335 Ga0265313_10015412
336 Ga0265313_10021184
337 Ga0265314_10009808
338 Ga0265342_10000032
339 Ga0373923_0015249
340 Ga0373954_0021522
341 Ga0373943_0030278
342 Ga0373955_0128614
343 Ga0373927_0000497
344 Ga0373933_0009155
345 Ga0373933_0094780
346 Ga0373937_0000071
347 Ga0373937_0008961
348 Ga0373937_0119599
349 Ga0373925_0001873
350 Ga0395900_0261140
351 Ga0436365_0530989
352 Ga0451577_0000129
353 Ga0451577_0002021
354 Ga0451577_0022284
355 Ga0453683_0001644
356 Ga0453683_0002452
357 Ga0453683_0005496
358 Ga0453684_0000411
359 Ga0453684_0005943
360 Ga0453684_0038818
361 Ga0495592_0031086
362 Ga0495603_0034596
363 Ga0495629_0054432
364 Ga0495638_0015699
365 Ga0495641_0041546
366 Ga0495651_0012292
367 Ga0495651_0014445
368 Ga0495651_0021585
369 Ga0495651_0052194
370 Ga0495653_0026090
371 Ga0495580_0001322
372 Ga0495580_0017932
373 Ga0495580_0042555
374 Ga0495580_0089519
375 Ga0495580_0156568
376 Ga0495582_0000161
377 Ga0495639_0016902
378 Ga0495662_0021094
379 Ga0495608_0005269
380 Ga0495608_0035262
381 Ga0495618_0095726
382 Ga0495628_0050090
383 Ga0495630_0012570
384 Ga0495630_0045121
385 Ga0495630_0067962
386 Ga0495630_0117903
387 Ga0495652_0002087
388 Ga0495640_0031972
389 Ga0495640_0033230
390 Ga0495586_0005927
391 Ga0495587_0000498
392 Ga0495587_0001224
393 Ga0495587_0027262
394 Ga0495587_0127498
395 Ga0495645_0005808
396 Ga0495645_0016149
397 Ga0495645_0021280
398 Ga0495645_0023627
399 Ga0495634_0044865
400 Ga0495634_0164683
401 Ga0495635_0003073
402 Ga0495635_0127588
403 Ga0495657_0023509
404 Ga0495657_0045953
405 Ga0495599_0002778
406 Ga0495623_0007740
407 Ga0495646_0080286
408 Ga0495647_0004756
409 Ga0495658_0009606
410 Ga0495658_0017162
411 Ga0495613_0014054
412 Ga0495613_0084950
413 Ga0495600_0008677
414 Ga0495600_0019763
415 Ga0495581_0136761
416 Ga0495604_0011346
417 Ga0495604_0015975
418 Ga0495604_0022028
419 Ga0495674_0002456
420 Ga0495674_0039448
421 Ga0495674_0074379
422 Ga0495676_0016069
423 Ga0495680_0000126
424 Ga0495680_0004585
425 Ga0495680_0005681
426 Ga0495675_0000296
427 Ga0495675_0001857
428 Ga0495675_0004827
429 Ga0495675_0008778
430 Ga0495675_0017932
431 Ga0495684_0002211
432 Ga0495684_0007631
433 Ga0495684_0121116
434 Ga0495593_0004009
435 Ga0495602_0000427
436 Ga0495602_0019953
437 Ga0495614_0007365
438 Ga0496104_0094822
439 Ga0501042_0106767
440 Ga0501076_0061048
441 nmdc:mga05p37_2475_c1
442 nmdc:mga05p37_44984_c1
443 nmdc:mga09592_95301_c1
444 nmdc:mga09592_964_c1
445 nmdc:mga0qj67_86992_c1
446 nmdc:mga0n895_42541_c1
447 nmdc:mga0n895_77735_c1
448 nmdc:mga0rr50_47772_c1
449 nmdc:mga08x19_3010_c1
450 nmdc:mga08x19_73414_c1
451 nmdc:mga08x19_9047_c1
452 nmdc:mga0a205_11753_c1
453 Ga0495601_0084014
454 Ga0495612_0004688

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01225

Mur_ligase

Mur ligase family, catalytic domain

26

102

0.94

PF08245

Mur_ligase_M

Mur ligase middle domain

118

318

0.93

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

340

468

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
4qf5-assembly2.cif.gz_B crystal structure i of murf from acinetobacter baumannii 0.9333 1 465
4qf5-assembly2.cif.gz_B crystal structure i of murf from acinetobacter baumannii 0.9254 1 465
8f5d-assembly1.cif.gz_A architecture of the mure-murf ligase bacterial cell wall biosynthesis complex 0.9202 26 320
4ziy-assembly1.cif.gz_A structure of udp-n-acetylmuramoylalanyl-d-glutamyl-2,6-diaminopimelate--d-alanyl-d-alanyl ligase from acinetobacter baumannii 0.907 1 465
3zl8-assembly1.cif.gz_A crystal structure of murf ligase from thermotoga maritima in complex with adp 0.9032 28 461
ID Description Score Start End Superfamily
af_P9WJL1_108_337_3.40.1190.10 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9604 92 315 3.40.1190.10
4ziyA02 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9472 90 319 3.40.1190.10
4ziyA02 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9391 90 319 3.40.1190.10
af_Q2FWH4_87_313_3.40.1190.10 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9345 90 319 3.40.1190.10
af_P9WJL1_108_337_3.40.1190.10 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.932 92 315 3.40.1190.10
ID Description Score Start End GO Terms
AF-A0A381UWL3-F1-model_v4 Mur ligase central domain-containing protein 0.9831 88 213 GO:0005524
GO:0009058
GO:0016881
AF-A0A3D3KUS4-F1-model_v4 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 0.9721 107 244 GO:0005524
GO:0009058
GO:0016881
AF-A0A535ULL8-F1-model_v4 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 0.9679 101 463 GO:0005524
GO:0009058
GO:0016881
AF-K9DKC7-F1-model_v4 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10) (D-alanyl-D-alanine-adding enzyme) 0.9633 1 465 GO:0005524
GO:0005737
GO:0008360
GO:0008766
GO:0009252
GO:0047480
GO:0051301
GO:0071555
AF-A0A6L9Q9H6-F1-model_v4 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 0.9633 87 295 GO:0005524
GO:0009058
GO:0016881

Map