F339917

General Info

Members Datasets Scaffolds Average Seq Length
227 161 222 417

Family's Representative Sequence

Representative Sequence 3300013105|Ga0157369_10070265|Ga0157369_100702652
Length 446
Sequence MSPQASETKGDEQARDCQAQKTADEVARRSYGKLVAFLAARTHDVAVAEDALSEAFLSALADWPQNGCPANPEGWLLTVARRKVIDAARRHSTTEAASVELQILAEGLEAAAAESAEIPDRRLALLFACAHPAIEAGVRAPLMLQVVLGLDAKRIASAFLSSPAAMGKRLVRAKDKIRQAGIPFRVPEREELPPRLDAVLEAIYAAFAEGWTGPGGAEGGMDVVRRDLTAEAIFMARLVTELLPDEPEALGLLALMLHAEARRLARRSAAGEFVPLAEQDPALWDTQMIDEAEALLHRAGTRGVVGRYQLEAALQSAHVDRCRTGKANWTEVAALYDALFAISGSPVVAINRALAIAELRGAQAGLEALPEPASDARLAEYQPYWAARAELLSRTDAREEAWDAYEIAIGLERDGAVRRFLQGRQARLNLGRDVIAEGGATWKLGG

Samples

Sample ID Description Type Environment
1 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
2 2738543024 Aminobacter sp. AP02 Isolate Unclassified
3 2885198086 Variovorax sp. 679 Isolate Unclassified
4 2885211737 Variovorax sp. 553 Isolate Unclassified
5 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
6 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
7 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
8 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
9 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
10 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
11 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
12 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
13 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
14 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
15 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
16 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
41 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
42 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
43 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
44 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
45 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
46 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
47 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
48 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
49 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
50 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
54 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
55 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
59 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
63 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
67 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
70 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
71 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
74 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
76 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
78 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
103 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
104 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
105 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
106 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
107 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
108 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
109 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
110 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
111 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
112 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
113 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
114 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
115 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
116 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
117 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
118 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
119 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
120 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
121 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
122 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
123 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
124 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
125 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
126 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
127 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
128 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
129 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
130 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
131 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
132 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
133 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
134 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
135 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
142 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
143 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
144 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
145 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
147 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
148 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
149 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
150 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
151 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
152 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
153 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
154 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
155 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
156 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
157 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
158 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
159 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
160 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
161 8002285264 Aminobacter anthyllidis LMG 26462 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 97.8
Metatranscriptomes 0
Isolates 2.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.89
Nodule 0.44
Rhizoplane 2.64
Rhizosphere 82.82
Stem 0
Stem Tuber 0
Unclassified 2.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24744J21845_10000631 3300002077 Bacteria 6425
2 JGI25151J46595_10001531 3300003187 Bacteria 15448
3 Ga0055526_1004005 3300003771 Bacteria 9067
4 Ga0055537_1000004 3300003773 Bacteria 167383
5 Ga0055534_1000095 3300003784 Bacteria 68059
6 Ga0055528_1000050 3300003790 Bacteria 93078
7 Ga0055540_1004316 3300003792 Bacteria 6473
8 Ga0055531_10001023 3300003794 Bacteria 22138
9 Ga0065712_10068902 3300005290 Bacteria 8600
10 Ga0070658_10047379 3300005327 Bacteria 3479
11 Ga0070690_100060318 3300005330 Bacteria 2441
12 Ga0070680_100112591 3300005336 Bacteria 2266
13 Ga0070668_100100778 3300005347 Bacteria 2288
14 Ga0070667_100076603 3300005367 Bacteria 2856
15 Ga0070711_100169245 3300005439 Bacteria 1664
16 Ga0070708_100257082 3300005445 Bacteria 1641
17 Ga0070663_100045642 3300005455 Bacteria 3096
18 Ga0070662_100003181 3300005457 Bacteria 10205
19 Ga0070681_10048191 3300005458 Bacteria 4258
20 Ga0068867_100002322 3300005459 Bacteria 13386
21 Ga0070685_10156710 3300005466 Bacteria 1448
22 Ga0070698_100054966 3300005471 Bacteria 4040
23 Ga0070698_100175881 3300005471 Bacteria 2080
24 Ga0070699_100157526 3300005518 Unclassified 2009
25 Ga0070679_100135532 3300005530 Bacteria 2443
26 Ga0070684_100003233 3300005535 Bacteria 12185
27 Ga0068853_100027349 3300005539 Bacteria 4792
28 Ga0070672_100006298 3300005543 Bacteria 7957
29 Ga0070693_100003644 3300005547 Bacteria 7199
30 Ga0070665_100011896 3300005548 Bacteria 8786
31 Ga0070665_100244462 3300005548 Bacteria 1795
32 Ga0068855_100024572 3300005563 Bacteria 7208
33 Ga0068857_100095047 3300005577 Unclassified 2669
34 Ga0068852_100082155 3300005616 Bacteria 2862
35 Ga0068861_100000326 3300005719 Bacteria 26888
36 Ga0068863_100014402 3300005841 Bacteria 7616
37 Ga0068863_100055006 3300005841 Bacteria 3770
38 Ga0068863_100128247 3300005841 Bacteria 2421
39 Ga0068862_100001502 3300005844 Bacteria 21405
40 Ga0068862_100075551 3300005844 Bacteria 2914
41 Ga0081455_10011390 3300005937 Bacteria 8940
42 Ga0081540_1031841 3300005983 Bacteria 2890
43 Ga0070717_10060361 3300006028 Unclassified 3140
44 Ga0075365_10046664 3300006038 Bacteria 2846
45 Ga0070712_100009069 3300006175 Bacteria 6264
46 Ga0075367_10009456 3300006178 Bacteria 5095
47 Ga0075367_10065511 3300006178 Bacteria 2176
48 Ga0075366_10010247 3300006195 Bacteria 5258
49 Ga0075366_10111863 3300006195 Bacteria 1643
50 Ga0068871_100004609 3300006358 Bacteria 9623
51 Ga0068871_100034636 3300006358 Bacteria 4008
52 Ga0068871_100234587 3300006358 Bacteria 1593
53 Ga0075428_100013775 3300006844 Bacteria 9007
54 Ga0075428_100054238 3300006844 Bacteria 4393
55 Ga0075430_100019791 3300006846 Bacteria 5726
56 Ga0075431_100004695 3300006847 Bacteria 13426
57 Ga0075431_100006935 3300006847 Bacteria 11262
58 Ga0075431_100129878 3300006847 Bacteria 2599
59 Ga0075431_100184267 3300006847 Bacteria 2141
60 Ga0075431_100207927 3300006847 Bacteria 2000
61 Ga0075431_100285761 3300006847 Bacteria 1670
62 Ga0075434_100000316 3300006871 Bacteria 34532
63 Ga0075434_100090201 3300006871 Bacteria 3067
64 Ga0075429_100010405 3300006880 Bacteria 8049
65 Ga0075429_100064252 3300006880 Bacteria 3197
66 Ga0075429_100214854 3300006880 Bacteria 1685
67 Ga0068865_100003226 3300006881 Bacteria 9770
68 Ga0068865_100004450 3300006881 Bacteria 8452
69 Ga0075435_100002704 3300007076 Bacteria 11832
70 Ga0075435_100056677 3300007076 Bacteria 3169
71 Ga0099795_10002442 3300007788 Bacteria 4371
72 Ga0105240_10006888 3300009093 Bacteria 16608
73 Ga0105240_10020238 3300009093 Bacteria 8882
74 Ga0105240_10033155 3300009093 Bacteria 6675
75 Ga0111539_10000908 3300009094 Bacteria 38705
76 Ga0111539_10030893 3300009094 Bacteria 6510
77 Ga0111539_10279294 3300009094 Bacteria 1943
78 Ga0111539_10479393 3300009094 Bacteria 1449
79 Ga0105243_10015685 3300009148 Bacteria 5729
80 Ga0105242_10026310 3300009176 Bacteria 4611
81 Ga0105242_10044725 3300009176 Bacteria 3586
82 Ga0105237_10001004 3300009545 Bacteria 37992
83 Ga0105237_10013320 3300009545 Bacteria 8625
84 Ga0105238_10001728 3300009551 Bacteria 22004
85 Ga0099796_10031048 3300010159 Bacteria 1739
86 Ga0105239_10020937 3300010375 Bacteria 7215
87 Ga0105239_10176658 3300010375 Bacteria 2388
88 Ga0157370_10015160 3300013104 Bacteria 7850
89 Ga0157369_10000057 3300013105 Bacteria 157096
90 Ga0157369_10070265 3300013105 Bacteria 3762
91 Ga0163162_10014198 3300013306 Bacteria 7782
92 Ga0163162_10033721 3300013306 Bacteria 5089
93 Ga0163162_10093428 3300013306 Bacteria 3093
94 Ga0163162_10233357 3300013306 Bacteria 1971
95 Ga0157372_10240481 3300013307 Bacteria 2101
96 Ga0157375_10000457 3300013308 Bacteria 37078
97 Ga0157375_10004258 3300013308 Bacteria 12408
98 Ga0157375_10222053 3300013308 Bacteria 2048
99 Ga0157380_10212666 3300014326 Bacteria 1724
100 Ga0182008_10041492 3300014497 Bacteria 2295
101 Ga0157379_10014621 3300014968 Bacteria 6882
102 Ga0157376_10005493 3300014969 Bacteria 8864
103 Ga0157376_10026352 3300014969 Bacteria 4593
104 Ga0163161_10014232 3300017792 Bacteria 5540
105 Ga0209565_1000018 3300025263 Bacteria 460940
106 Ga0209673_1000090 3300025273 Bacteria 202223
107 Ga0209673_1007292 3300025273 Bacteria 5133
108 Ga0209675_1000005 3300025291 Bacteria 849192
109 Ga0209564_1000078 3300025295 Bacteria 275766
110 Ga0209256_1000070 3300025299 Bacteria 245034
111 Ga0209051_1000263 3300025303 Bacteria 87839
112 Ga0209257_1000108 3300025304 Bacteria 240229
113 Ga0207695_10005640 3300025913 Bacteria 16519
114 Ga0207671_10003770 3300025914 Bacteria 14904
115 Ga0207693_10011601 3300025915 Bacteria 7129
116 Ga0207649_10053288 3300025920 Bacteria 2513
117 Ga0207694_10006143 3300025924 Bacteria 9176
118 Ga0207664_10001103 3300025929 Bacteria 17980
119 Ga0207706_10003247 3300025933 Bacteria 15585
120 Ga0207704_10080553 3300025938 Bacteria 2103
121 Ga0207691_10010596 3300025940 Bacteria 8841
122 Ga0207711_10210337 3300025941 Bacteria 1777
123 Ga0207661_10003081 3300025944 Bacteria 11544
124 Ga0207668_10007899 3300025972 Bacteria 6324
125 Ga0207639_10008674 3300026041 Bacteria 6978
126 Ga0207639_10043562 3300026041 Bacteria 3370
127 Ga0207678_10040344 3300026067 Bacteria 4049
128 Ga0207702_10042794 3300026078 Bacteria 3800
129 Ga0207641_10081076 3300026088 Bacteria 2817
130 Ga0207641_10169173 3300026088 Bacteria 1993
131 Ga0207648_10010289 3300026089 Bacteria 8882
132 Ga0207674_10026715 3300026116 Bacteria 6124
133 Ga0207674_10037232 3300026116 Bacteria 5062
134 Ga0207674_10081627 3300026116 Unclassified 3235
135 Ga0207675_100001997 3300026118 Bacteria 20341
136 Ga0207683_10016868 3300026121 Bacteria 6214
137 Ga0268265_10000644 3300028380 Bacteria 34680
138 Ga0268265_10071580 3300028380 Bacteria 2701
139 Ga0265325_10006078 3300031241 Bacteria 7387
140 Ga0265313_10069575 3300031595 Bacteria 1624
141 Ga0265314_10002994 3300031711 Bacteria 16720
142 Ga0265314_10049065 3300031711 Bacteria 2958
143 Ga0265314_10132549 3300031711 Bacteria 1552
144 Ga0265342_10008995 3300031712 Bacteria 7093
145 Ga0307416_100064649 3300032002 Bacteria 3002
146 Ga0307415_100112811 3300032126 Bacteria 2021
147 Ga0373944_0003543 3300035089 Bacteria 4036
148 Ga0373937_0005504 3300036401 Bacteria 10853
149 Ga0395905_0000043 3300037471 Bacteria 247469
150 Ga0436364_0705735 3300037853 Bacteria 7012
151 Ga0466961_0074676 3300044693 Bacteria 2150
152 Ga0466959_0022530 3300045049 Bacteria 4658
153 Ga0495603_0046603 3300046455 Bacteria 2583
154 Ga0495629_0004906 3300046459 Bacteria 10042
155 Ga0495629_0051064 3300046459 Bacteria 2895
156 Ga0495638_0028687 3300046460 Bacteria 3591
157 Ga0495638_0040965 3300046460 Bacteria 2933
158 Ga0495638_0087170 3300046460 Bacteria 1886
159 Ga0495580_0001866 3300046472 Bacteria 18532
160 Ga0495580_0095882 3300046472 Bacteria 2063
161 Ga0495582_0001408 3300046473 Bacteria 13557
162 Ga0495582_0005212 3300046473 Bacteria 7272
163 Ga0495584_0054770 3300046491 Bacteria 2007
164 Ga0495594_0012979 3300046499 Bacteria 4344
165 Ga0495610_0018815 3300046512 Bacteria 3884
166 Ga0495620_0023445 3300046515 Bacteria 2950
167 Ga0495665_0008570 3300046531 Bacteria 5549
168 Ga0495665_0025162 3300046531 Bacteria 3198
169 Ga0495586_0072406 3300046535 Bacteria 1884
170 Ga0495658_0019322 3300046683 Bacteria 3554
171 Ga0495613_0009819 3300046689 Bacteria 7117
172 Ga0495581_0041628 3300047315 Bacteria 2659
173 Ga0495674_0041511 3300047319 Bacteria 4109
174 Ga0495676_0031671 3300047321 Bacteria 4469
175 Ga0495684_0057751 3300047471 Bacteria 2957
176 Ga0496104_0000045 3300048907 Bacteria 152445
177 Ga0496104_0000616 3300048907 Bacteria 30523
178 Ga0496104_0001487 3300048907 Bacteria 20235
179 Ga0496104_0079881 3300048907 Bacteria 3118
180 Ga0496105_0000024 3300048908 Bacteria 153740
181 Ga0496115_0017028 3300048918 Bacteria 5545
182 Ga0496126_0004663 3300048929 Bacteria 16210
183 Ga0501032_0008195 3300049569 Bacteria 7615
184 Ga0501033_0036197 3300049570 Bacteria 3700
185 Ga0501034_0035211 3300049571 Bacteria 5076
186 Ga0501043_0058708 3300049579 Bacteria 3020
187 Ga0501043_0068024 3300049579 Bacteria 2797
188 Ga0501046_0018909 3300049580 Bacteria 5722
189 Ga0501046_0072979 3300049580 Bacteria 2664
190 Ga0501047_0188055 3300049581 Bacteria 1930
191 Ga0501047_0192677 3300049581 Bacteria 1901
192 Ga0501070_0026954 3300049586 Bacteria 4819
193 Ga0501077_0084171 3300049593 Bacteria 2016
194 Ga0501079_0037238 3300049741 Bacteria 3749
195 Ga0501080_0137458 3300049742 Bacteria 2260
196 Ga0501080_0162645 3300049742 Bacteria 2061
197 Ga0501035_0003651 3300049822 Bacteria 14672
198 Ga0501044_0020081 3300049823 Bacteria 7133
199 Ga0501044_0188009 3300049823 Bacteria 2029
200 nmdc:mga0k408_120473_c1 3300050493 Bacteria 1554
201 nmdc:mga0k408_4308_c1 3300050493 Bacteria 7559
202 nmdc:mga05p37_28302_c1 3300050507 Bacteria 6834
203 nmdc:mga05p37_31911_c1 3300050507 Bacteria 6439
204 nmdc:mga09592_104878_c1 3300050508 Bacteria 2423
205 nmdc:mga09592_20964_c1 3300050508 Bacteria 5381
206 nmdc:mga09592_6162_c1 3300050508 Bacteria 9762
207 nmdc:mga0qj67_71426_c1 3300050509 Bacteria 2771
208 nmdc:mga0qj67_8797_c1 3300050509 Bacteria 7492
209 nmdc:mga06r32_27418_c1 3300050510 Bacteria 5321
210 nmdc:mga06r32_36212_c1 3300050510 Bacteria 4661
211 nmdc:mga06r32_7865_c1 3300050510 Bacteria 9581
212 nmdc:mga08y16_12756_c1 3300050511 Bacteria 8842
213 nmdc:mga08y16_132171_c1 3300050511 Bacteria 2595
214 nmdc:mga0n895_32834_c1 3300050512 Bacteria 4984
215 Ga0500610_0002850 3300053079 Bacteria 6492
216 Ga0500593_002347 3300053117 Bacteria 6934
217 Ga0500559_0009694 3300053136 Bacteria 4158
218 Ga0500568_0000366 3300053139 Bacteria 34998
219 Ga0500634_0022376 3300053161 Bacteria 3430
220 Ga0501082_0018919 3300060353 Bacteria 5933
221 Ga0501082_0388987 3300060353 Unclassified 1217
222 Ga0530510_0116524 3300061734 Bacteria 1959

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300037853 Ga0436364_0705735 Ga0436364_0705735_5910_6953 346
2 3300049822 Ga0501035_0003651 Ga0501035_0003651_11_1093 360
3 3300031711 Ga0265314_10049065 Ga0265314_100490652 362
4 3300049742 Ga0501080_0137458 Ga0501080_0137458_476_1726 374
5 3300049570 Ga0501033_0036197 Ga0501033_0036197_2023_3273 376
6 3300049823 Ga0501044_0188009 Ga0501044_0188009_279_1529 376
7 3300046460 Ga0495638_0040965 Ga0495638_0040965_1033_2289 377
8 3300048907 Ga0496104_0079881 Ga0496104_0079881_544_1785 378
9 3300049580 Ga0501046_0072979 Ga0501046_0072979_49_1299 382
10 3300049586 Ga0501070_0026954 Ga0501070_0026954_2824_4074 382
11 3300049823 Ga0501044_0020081 Ga0501044_0020081_699_1949 382
12 3300060353 Ga0501082_0388987 Ga0501082_0388987_24_1172 382
13 3300006847 Ga0075431_100129878 Ga0075431_1001298783 384
14 3300050510 nmdc:mga06r32_36212_c1 nmdc:mga06r32_36212_c1_2890_4170 384
15 3300031241 Ga0265325_10006078 Ga0265325_100060786 390
16 3300049581 Ga0501047_0188055 Ga0501047_0188055_215_1387 390
17 3300006871 Ga0075434_100090201 Ga0075434_1000902011 392
18 3300007076 Ga0075435_100056677 Ga0075435_1000566772 392
19 3300050512 nmdc:mga0n895_32834_c1 nmdc:mga0n895_32834_c1_3436_4710 392
20 3300049579 Ga0501043_0068024 Ga0501043_0068024_561_1811 395
21 3300049581 Ga0501047_0192677 Ga0501047_0192677_219_1469 395
22 3300053079 Ga0500610_0002850 Ga0500610_0002850_1556_2818 396
23 3300003771 Ga0055526_1004005 Ga0055526_10040058 398
24 3300003773 Ga0055537_1000004 Ga0055537_100000497 398
25 3300003784 Ga0055534_1000095 Ga0055534_100009544 398
26 3300003790 Ga0055528_1000050 Ga0055528_100005026 398
27 3300025263 Ga0209565_1000018 Ga0209565_1000018112 398
28 3300025273 Ga0209673_1000090 Ga0209673_100009065 398
29 3300025291 Ga0209675_1000005 Ga0209675_1000005112 398
30 3300025295 Ga0209564_1000078 Ga0209564_1000078152 398
31 3300025299 Ga0209256_1000070 Ga0209256_1000070173 398
32 3300005327 Ga0070658_10047379 Ga0070658_100473792 404
33 3300006880 Ga0075429_100010405 Ga0075429_1000104055 405
34 3300050507 nmdc:mga05p37_28302_c1 nmdc:mga05p37_28302_c1_4492_5757 405
35 3300050508 nmdc:mga09592_6162_c1 nmdc:mga09592_6162_c1_4481_5746 405
36 3300006195 Ga0075366_10010247 Ga0075366_100102475 406
37 3300048907 Ga0496104_0000616 Ga0496104_0000616_15822_17087 406
38 3300050493 nmdc:mga0k408_120473_c1 nmdc:mga0k408_120473_c1_120_1358 406
39 3300050493 nmdc:mga0k408_4308_c1 nmdc:mga0k408_4308_c1_4802_6040 406
40 3300053136 Ga0500559_0009694 Ga0500559_0009694_1726_2979 407
41 3300031711 Ga0265314_10132549 Ga0265314_101325492 408
42 3300005530 Ga0070679_100135532 Ga0070679_1001355323 409
43 3300003792 Ga0055540_1004316 Ga0055540_10043163 410
44 3300003794 Ga0055531_10001023 Ga0055531_1000102324 410
45 3300005548 Ga0070665_100011896 Ga0070665_1000118965 410
46 3300005983 Ga0081540_1031841 Ga0081540_10318412 410
47 3300025303 Ga0209051_1000263 Ga0209051_100026320 410
48 3300025304 Ga0209257_1000108 Ga0209257_100010880 410
49 iso_pu_bacteria 8002285264 8002291138 410
50 3300005547 Ga0070693_100003644 Ga0070693_1000036443 411
51 3300005563 Ga0068855_100024572 Ga0068855_1000245726 411
52 3300005616 Ga0068852_100082155 Ga0068852_1000821552 411
53 3300006358 Ga0068871_100034636 Ga0068871_1000346365 411
54 3300006881 Ga0068865_100004450 Ga0068865_1000044503 411
55 3300009093 Ga0105240_10006888 Ga0105240_1000688815 411
56 3300026078 Ga0207702_10042794 Ga0207702_100427943 411
57 3300049569 Ga0501032_0008195 Ga0501032_0008195_563_1819 411
58 3300049571 Ga0501034_0035211 Ga0501034_0035211_3746_5002 411
59 3300003187 JGI25151J46595_10001531 JGI25151J46595_1000153114 412
60 3300006178 Ga0075367_10065511 Ga0075367_100655112 412
61 3300010375 Ga0105239_10176658 Ga0105239_101766583 412
62 3300031711 Ga0265314_10002994 Ga0265314_100029944 412
63 3300031712 Ga0265342_10008995 Ga0265342_100089954 412
64 3300046512 Ga0495610_0018815 Ga0495610_0018815_2171_3421 412
65 3300046515 Ga0495620_0023445 Ga0495620_0023445_936_2186 412
66 3300053117 Ga0500593_002347 Ga0500593_002347_4364_5614 412
67 3300053161 Ga0500634_0022376 Ga0500634_0022376_1515_2765 412
68 3300009148 Ga0105243_10015685 Ga0105243_100156853 413
69 3300031595 Ga0265313_10069575 Ga0265313_100695752 413
70 3300032002 Ga0307416_100064649 Ga0307416_1000646492 413
71 3300032126 Ga0307415_100112811 Ga0307415_1001128112 413
72 3300044693 Ga0466961_0074676 Ga0466961_0074676_300_1568 413
73 3300045049 Ga0466959_0022530 Ga0466959_0022530_1461_2741 413
74 iso_pu_bacteria 2885198086 2885202298 413
75 iso_pu_bacteria 2885211737 2885215951 413
76 3300005457 Ga0070662_100003181 Ga0070662_1000031819 414
77 3300005719 Ga0068861_100000326 Ga0068861_10000032623 414
78 3300005844 Ga0068862_100001502 Ga0068862_1000015028 414
79 3300006028 Ga0070717_10060361 Ga0070717_100603612 414
80 3300006844 Ga0075428_100054238 Ga0075428_1000542383 414
81 3300006846 Ga0075430_100019791 Ga0075430_1000197914 414
82 3300006847 Ga0075431_100006935 Ga0075431_1000069355 414
83 3300006847 Ga0075431_100184267 Ga0075431_1001842672 414
84 3300006871 Ga0075434_100000316 Ga0075434_10000031626 414
85 3300006880 Ga0075429_100064252 Ga0075429_1000642522 414
86 3300006880 Ga0075429_100214854 Ga0075429_1002148542 414
87 3300009094 Ga0111539_10479393 Ga0111539_104793932 414
88 3300014326 Ga0157380_10212666 Ga0157380_102126661 414
89 3300025273 Ga0209673_1007292 Ga0209673_10072925 414
90 3300025933 Ga0207706_10003247 Ga0207706_1000324712 414
91 3300025972 Ga0207668_10007899 Ga0207668_100078995 414
92 3300026116 Ga0207674_10026715 Ga0207674_100267152 414
93 3300026118 Ga0207675_100001997 Ga0207675_10000199717 414
94 3300028380 Ga0268265_10000644 Ga0268265_100006448 414
95 3300037471 Ga0395905_0000043 Ga0395905_0000043_213759_215003 414
96 3300050507 nmdc:mga05p37_31911_c1 nmdc:mga05p37_31911_c1_3731_4990 414
97 3300050508 nmdc:mga09592_104878_c1 nmdc:mga09592_104878_c1_349_1608 414
98 3300050508 nmdc:mga09592_20964_c1 nmdc:mga09592_20964_c1_3887_5146 414
99 3300050509 nmdc:mga0qj67_71426_c1 nmdc:mga0qj67_71426_c1_1149_2408 414
100 3300050509 nmdc:mga0qj67_8797_c1 nmdc:mga0qj67_8797_c1_2144_3403 414
101 3300050510 nmdc:mga06r32_7865_c1 nmdc:mga06r32_7865_c1_7134_8393 414
102 3300005330 Ga0070690_100060318 Ga0070690_1000603182 415
103 3300005347 Ga0070668_100100778 Ga0070668_1001007782 415
104 3300005367 Ga0070667_100076603 Ga0070667_1000766032 415
105 3300005459 Ga0068867_100002322 Ga0068867_1000023225 415
106 3300005466 Ga0070685_10156710 Ga0070685_101567101 415
107 3300005471 Ga0070698_100054966 Ga0070698_1000549667 415
108 3300005518 Ga0070699_100157526 Ga0070699_1001575262 415
109 3300005535 Ga0070684_100003233 Ga0070684_1000032332 415
110 3300005543 Ga0070672_100006298 Ga0070672_1000062984 415
111 3300005548 Ga0070665_100244462 Ga0070665_1002444622 415
112 3300005577 Ga0068857_100095047 Ga0068857_1000950473 415
113 3300005841 Ga0068863_100014402 Ga0068863_10001440210 415
114 3300006844 Ga0075428_100013775 Ga0075428_1000137755 415
115 3300006847 Ga0075431_100004695 Ga0075431_1000046953 415
116 3300006847 Ga0075431_100207927 Ga0075431_1002079273 415
117 3300006847 Ga0075431_100285761 Ga0075431_1002857612 415
118 3300006881 Ga0068865_100003226 Ga0068865_1000032264 415
119 3300007076 Ga0075435_100002704 Ga0075435_10000270410 415
120 3300009093 Ga0105240_10033155 Ga0105240_100331553 415
121 3300009094 Ga0111539_10000908 Ga0111539_1000090816 415
122 3300009094 Ga0111539_10030893 Ga0111539_100308932 415
123 3300009176 Ga0105242_10026310 Ga0105242_100263103 415
124 3300009176 Ga0105242_10044725 Ga0105242_100447255 415
125 3300009545 Ga0105237_10001004 Ga0105237_100010048 415
126 3300013104 Ga0157370_10015160 Ga0157370_100151603 415
127 3300013306 Ga0163162_10014198 Ga0163162_100141984 415
128 3300013306 Ga0163162_10093428 Ga0163162_100934283 415
129 3300013308 Ga0157375_10000457 Ga0157375_1000045710 415
130 3300013308 Ga0157375_10004258 Ga0157375_100042588 415
131 3300014497 Ga0182008_10041492 Ga0182008_100414923 415
132 3300025929 Ga0207664_10001103 Ga0207664_100011033 415
133 3300025938 Ga0207704_10080553 Ga0207704_100805532 415
134 3300025940 Ga0207691_10010596 Ga0207691_100105964 415
135 3300025944 Ga0207661_10003081 Ga0207661_1000308110 415
136 3300026088 Ga0207641_10081076 Ga0207641_100810762 415
137 3300026089 Ga0207648_10010289 Ga0207648_100102895 415
138 3300026116 Ga0207674_10081627 Ga0207674_100816273 415
139 3300026121 Ga0207683_10016868 Ga0207683_100168682 415
140 3300046460 Ga0495638_0028687 Ga0495638_0028687_1394_2662 415
141 3300048907 Ga0496104_0000045 Ga0496104_0000045_75369_76625 415
142 3300048908 Ga0496105_0000024 Ga0496105_0000024_150910_152166 415
143 3300050510 nmdc:mga06r32_27418_c1 nmdc:mga06r32_27418_c1_1683_2945 415
144 3300050511 nmdc:mga08y16_12756_c1 nmdc:mga08y16_12756_c1_2298_3560 415
145 3300050511 nmdc:mga08y16_132171_c1 nmdc:mga08y16_132171_c1_331_1593 415
146 iso_pu_bacteria 2738543024 2739307841 415
147 3300005336 Ga0070680_100112591 Ga0070680_1001125912 416
148 3300005439 Ga0070711_100169245 Ga0070711_1001692451 416
149 3300005455 Ga0070663_100045642 Ga0070663_1000456424 416
150 3300005844 Ga0068862_100075551 Ga0068862_1000755513 416
151 3300006175 Ga0070712_100009069 Ga0070712_1000090693 416
152 3300006358 Ga0068871_100234587 Ga0068871_1002345872 416
153 3300013307 Ga0157372_10240481 Ga0157372_102404812 416
154 3300014969 Ga0157376_10026352 Ga0157376_100263522 416
155 3300025915 Ga0207693_10011601 Ga0207693_100116012 416
156 3300025920 Ga0207649_10053288 Ga0207649_100532883 416
157 3300026041 Ga0207639_10008674 Ga0207639_100086745 416
158 3300026067 Ga0207678_10040344 Ga0207678_100403442 416
159 3300028380 Ga0268265_10071580 Ga0268265_100715803 416
160 3300035089 Ga0373944_0003543 Ga0373944_0003543_1693_3000 416
161 3300036401 Ga0373937_0005504 Ga0373937_0005504_5228_6535 416
162 3300046455 Ga0495603_0046603 Ga0495603_0046603_383_1690 416
163 3300046459 Ga0495629_0051064 Ga0495629_0051064_207_1514 416
164 3300046472 Ga0495580_0001866 Ga0495580_0001866_10990_12255 416
165 3300046472 Ga0495580_0095882 Ga0495580_0095882_61_1368 416
166 3300046473 Ga0495582_0001408 Ga0495582_0001408_5052_6317 416
167 3300046473 Ga0495582_0005212 Ga0495582_0005212_3120_4427 416
168 3300046531 Ga0495665_0025162 Ga0495665_0025162_645_1952 416
169 3300046535 Ga0495586_0072406 Ga0495586_0072406_494_1801 416
170 3300046683 Ga0495658_0019322 Ga0495658_0019322_473_1780 416
171 3300047315 Ga0495581_0041628 Ga0495581_0041628_632_1939 416
172 3300047319 Ga0495674_0041511 Ga0495674_0041511_1794_3101 416
173 3300048907 Ga0496104_0001487 Ga0496104_0001487_18042_19292 416
174 3300049579 Ga0501043_0058708 Ga0501043_0058708_551_1828 416
175 3300049580 Ga0501046_0018909 Ga0501046_0018909_2704_3981 416
176 3300049741 Ga0501079_0037238 Ga0501079_0037238_213_1490 416
177 3300049742 Ga0501080_0162645 Ga0501080_0162645_327_1604 416
178 3300053139 Ga0500568_0000366 Ga0500568_0000366_32371_33702 416
179 3300060353 Ga0501082_0018919 Ga0501082_0018919_2214_3491 416
180 iso_pu_bacteria 2585428062 2587758059 416
181 3300005458 Ga0070681_10048191 Ga0070681_100481912 417
182 3300005539 Ga0068853_100027349 Ga0068853_1000273494 417
183 3300005841 Ga0068863_100128247 Ga0068863_1001282473 417
184 3300017792 Ga0163161_10014232 Ga0163161_100142324 417
185 3300026041 Ga0207639_10043562 Ga0207639_100435623 417
186 3300026116 Ga0207674_10037232 Ga0207674_100372322 417
187 3300005290 Ga0065712_10068902 Ga0065712_100689021 418
188 3300005841 Ga0068863_100055006 Ga0068863_1000550063 418
189 3300006358 Ga0068871_100004609 Ga0068871_1000046092 418
190 3300009094 Ga0111539_10279294 Ga0111539_102792942 418
191 3300013306 Ga0163162_10033721 Ga0163162_100337216 418
192 3300013306 Ga0163162_10233357 Ga0163162_102333572 418
193 3300013308 Ga0157375_10222053 Ga0157375_102220532 418
194 3300014968 Ga0157379_10014621 Ga0157379_100146214 418
195 3300025913 Ga0207695_10005640 Ga0207695_100056406 418
196 3300025914 Ga0207671_10003770 Ga0207671_100037709 418
197 3300025924 Ga0207694_10006143 Ga0207694_100061434 418
198 3300025941 Ga0207711_10210337 Ga0207711_102103372 418
199 3300026088 Ga0207641_10169173 Ga0207641_101691732 418
200 3300046459 Ga0495629_0004906 Ga0495629_0004906_5907_7184 418
201 3300046460 Ga0495638_0087170 Ga0495638_0087170_305_1561 418
202 3300046491 Ga0495584_0054770 Ga0495584_0054770_543_1799 418
203 3300046499 Ga0495594_0012979 Ga0495594_0012979_729_2006 418
204 3300046531 Ga0495665_0008570 Ga0495665_0008570_2369_3646 418
205 3300046689 Ga0495613_0009819 Ga0495613_0009819_844_2121 418
206 3300047321 Ga0495676_0031671 Ga0495676_0031671_2689_3966 418
207 3300047471 Ga0495684_0057751 Ga0495684_0057751_1223_2500 418
208 3300061734 Ga0530510_0116524 Ga0530510_0116524_362_1618 418
209 3300005471 Ga0070698_100175881 Ga0070698_1001758813 419
210 3300007788 Ga0099795_10002442 Ga0099795_100024423 419
211 3300009093 Ga0105240_10020238 Ga0105240_100202385 419
212 3300009545 Ga0105237_10013320 Ga0105237_100133202 419
213 3300009551 Ga0105238_10001728 Ga0105238_100017283 419
214 3300010159 Ga0099796_10031048 Ga0099796_100310482 419
215 3300010375 Ga0105239_10020937 Ga0105239_100209377 419
216 3300013105 Ga0157369_10000057 Ga0157369_10000057113 419
217 3300002077 JGI24744J21845_10000631 JGI24744J21845_100006317 420
218 3300005445 Ga0070708_100257082 Ga0070708_1002570821 420
219 3300005937 Ga0081455_10011390 Ga0081455_100113904 420
220 3300006038 Ga0075365_10046664 Ga0075365_100466643 420
221 3300006178 Ga0075367_10009456 Ga0075367_100094565 420
222 3300006195 Ga0075366_10111863 Ga0075366_101118632 420
223 3300013105 Ga0157369_10070265 Ga0157369_100702652 420
224 3300014969 Ga0157376_10005493 Ga0157376_100054937 420
225 3300048918 Ga0496115_0017028 Ga0496115_0017028_973_2313 420
226 3300048929 Ga0496126_0004663 Ga0496126_0004663_8165_9472 420
227 3300049593 Ga0501077_0084171 Ga0501077_0084171_60_1322 420

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF20239

DUF6596

Family of unknown function (DUF6596)

195

300

0.94

PF04542

Sigma70_r2

Sigma-70 region 2

26

94

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
2lsu-assembly1.cif.gz_A the nmr high resolution structure of yeast tah1 in a free form 0.8143 336 420
2kcv-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.8141 330 417
4j8e-assembly1.cif.gz_A middle domain of hsc70-interacting protein, crystal form i 0.8119 293 397
2xgm-assembly1.cif.gz_A substrate and product analogues as human o-glcnac transferase inhibitors. 0.8112 332 415
1na3-assembly2.cif.gz_B design of stable alpha-helical arrays from an idealized tpr motif 0.8066 336 419
ID Description Score Start End Superfamily
af_P0AGM5_187_259_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8664 339 411 1.25.40.10
af_A0A0R4IV14_22_108_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8443 336 415 1.25.40.10
af_A0A0R4IV14_290_391_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.842 333 417 1.25.40.10
af_A0A0P0W207_334_462_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8355 292 416 1.25.40.10
af_P0AGM5_187_259_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.835 339 411 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A441UZE5-F1-model_v4 RNA polymerase subunit sigma-70 0.9955 251 416
AF-A0A3S2CG37-F1-model_v4 RNA polymerase subunit sigma-70 0.9938 270 415
AF-A0A434RA23-F1-model_v4 RNA polymerase subunit sigma-70 0.992 253 417
AF-A0A3S1MXC8-F1-model_v4 RNA polymerase subunit sigma-70 0.987 219 417
AF-A0A434RA23-F1-model_v4 RNA polymerase subunit sigma-70 0.986 253 417

Feature Viewer

pLDDT pTM Quality
89.05 0.87 High
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Predicted Structure (AlphaFold2)

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