F339900

General Info

Members Datasets Scaffolds Average Seq Length
227 179 454 189

Family's Representative Sequence

Representative Sequence 3300010159|Ga0099796_10050217|Ga0099796_100502171
Length 222
Sequence MTKVKESIRTHRPARRRKPSKGQQVGYLRVSSLDQNEVRQLEGLALNKTFTDKASGKDVKRPQLEAMQSFVREGDTVFCHSMDRLARNLDDLRRIVLGLTERGVHIVFVKENLTFTGEDSPMSNLLLSVMGAFAQFERELIRERQREGIAIARREGKYTGRKPSLTPTRAAELRRRVADGDSEVALAREFGISRDTLYRYVPVKKRRAGSLQNESYAGNRRR

Samples

Sample ID Description Type Environment
1 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
2 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
5 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
6 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
7 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
8 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
15 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
16 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
17 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
22 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
23 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
26 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
30 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
42 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
47 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
48 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
70 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
71 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
72 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
73 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
74 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300030879 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
113 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
114 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
115 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
116 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
117 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
118 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
119 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
120 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
121 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
122 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
123 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
124 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
125 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
126 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
127 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
128 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
129 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
130 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
131 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
132 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
133 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
134 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
135 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
136 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
137 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
138 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
139 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
140 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
141 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
142 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
143 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
144 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
145 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
146 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
147 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
148 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
149 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
150 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
151 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
152 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
153 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
154 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
155 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
156 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
157 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
158 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
159 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
160 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
161 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
162 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
163 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
164 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
171 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
172 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
173 2527291627 Frankia casuarinae Thr Isolate Nodule
174 2576861822 Frankia sp. CeD Isolate Nodule
175 2710264753 Frankia sp. KB5 Isolate Nodule
176 2885383462 Bradyrhizobium sp. Leo170 Isolate Unclassified
177 2891088606 Methylosinus sp. 3S-1 Isolate Rhizosphere
178 637000116 Frankia casuarinae CcI3 Isolate Nodule
179 8055301274 Paraburkholderia kirstenboschensis LMG 28727 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 96.04
Metatranscriptomes 0.88
Isolates 3.08

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.32
Nodule 2.2
Rhizoplane 4.85
Rhizosphere 88.55
Stem 0
Stem Tuber 0
Unclassified 3.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0099796_10050217 3300010159 Bacteria 1445
2 MRS1b_contig_3155663 2162886011 Bacteria 1236
3 rootH2_10077556 3300003320 Bacteria 9237
4 Ga0055529_1000060 3300003763 Bacteria 191230
5 JGI25405J52794_10002006 3300003911 Bacteria 3450
6 Ga0058863_10785865 3300004799 Bacteria 813
7 Ga0065712_10121019 3300005290 Bacteria 1670
8 Ga0065715_10286051 3300005293 Bacteria 1074
9 Ga0070658_10009842 3300005327 Bacteria 7680
10 Ga0070658_10020862 3300005327 Unclassified 5249
11 Ga0070658_10027767 3300005327 Bacteria 4542
12 Ga0070676_10012855 3300005328 Bacteria 4582
13 Ga0070683_100445963 3300005329 Bacteria 1235
14 Ga0070690_100016491 3300005330 Bacteria 4427
15 Ga0070670_100052413 3300005331 Bacteria 3504
16 Ga0070666_10004243 3300005335 Bacteria 8710
17 Ga0070660_100185272 3300005339 Bacteria 1685
18 Ga0070660_100756391 3300005339 Bacteria 816
19 Ga0070689_100003602 3300005340 Bacteria 10323
20 Ga0070687_100634219 3300005343 Bacteria 738
21 Ga0070661_100066600 3300005344 Bacteria 2646
22 Ga0070668_100038337 3300005347 Bacteria 3662
23 Ga0070669_100202454 3300005353 Bacteria 1563
24 Ga0070675_100002362 3300005354 Bacteria 14043
25 Ga0070671_100016307 3300005355 Bacteria 6009
26 Ga0070688_100043187 3300005365 Bacteria 2776
27 Ga0070667_100007651 3300005367 Bacteria 8957
28 Ga0070710_10358068 3300005437 Bacteria 968
29 Ga0070663_100002274 3300005455 Bacteria 10756
30 Ga0070681_10130540 3300005458 Bacteria 2445
31 Ga0068867_100051278 3300005459 Bacteria 3042
32 Ga0070685_10007814 3300005466 Bacteria 5473
33 Ga0070698_100578996 3300005471 Bacteria 1062
34 Ga0070684_100479031 3300005535 Bacteria 1152
35 Ga0070672_100090307 3300005543 Bacteria 2470
36 Ga0068855_100011518 3300005563 Bacteria 10688
37 Ga0070664_100007075 3300005564 Bacteria 9053
38 Ga0068857_100080658 3300005577 Bacteria 2905
39 Ga0068854_100712299 3300005578 Bacteria 867
40 Ga0068852_100003099 3300005616 Bacteria 11574
41 Ga0068852_100015385 3300005616 Bacteria 5932
42 Ga0068859_100005239 3300005617 Bacteria 13175
43 Ga0068864_100001117 3300005618 Bacteria 22439
44 Ga0068861_100143671 3300005719 Bacteria 1950
45 Ga0068851_10095573 3300005834 Bacteria 1570
46 Ga0068870_10013974 3300005840 Bacteria 3784
47 Ga0068863_100013495 3300005841 Bacteria 7881
48 Ga0068858_100023624 3300005842 Bacteria 5728
49 Ga0068862_100634550 3300005844 Bacteria 1029
50 Ga0081455_10017229 3300005937 Bacteria 6936
51 Ga0081538_10037126 3300005981 Bacteria 3168
52 Ga0097621_100005780 3300006237 Bacteria 8734
53 Ga0068871_100043186 3300006358 Bacteria 3621
54 Ga0068865_100099112 3300006881 Bacteria 2130
55 Ga0097620_100005239 3300006931 Bacteria 13175
56 Ga0105240_10040942 3300009093 Bacteria 5919
57 Ga0105240_10107083 3300009093 Bacteria 3390
58 Ga0105240_11121812 3300009093 Bacteria 836
59 Ga0114129_10188062 3300009147 Bacteria 2806
60 Ga0105241_10173439 3300009174 Bacteria 1783
61 Ga0105248_10071993 3300009177 Bacteria 3885
62 Ga0105237_10018411 3300009545 Bacteria 7227
63 Ga0105237_10292860 3300009545 Bacteria 1630
64 Ga0105238_10728847 3300009551 Bacteria 1004
65 Ga0105238_10966925 3300009551 Bacteria 872
66 Ga0105239_10086701 3300010375 Bacteria 3451
67 Ga0157370_10005035 3300013104 Bacteria 14928
68 Ga0157369_10001504 3300013105 Bacteria 28605
69 Ga0157369_10980009 3300013105 Bacteria 866
70 Ga0157374_10003493 3300013296 Bacteria 13207
71 Ga0157374_10004112 3300013296 Bacteria 12213
72 Ga0157374_10006484 3300013296 Bacteria 9934
73 Ga0157374_10017541 3300013296 Bacteria 6306
74 Ga0157374_10228777 3300013296 Unclassified 1826
75 Ga0157378_10033740 3300013297 Bacteria 4526
76 Ga0163162_10029885 3300013306 Bacteria 5395
77 Ga0163162_10552929 3300013306 Bacteria 1279
78 Ga0163162_11225726 3300013306 Unclassified 852
79 Ga0157372_10605430 3300013307 Bacteria 1277
80 Ga0157372_11122168 3300013307 Bacteria 909
81 Ga0157375_10056163 3300013308 Bacteria 3885
82 Ga0157375_10990496 3300013308 Bacteria 981
83 Ga0163163_10000768 3300014325 Bacteria 27220
84 Ga0182008_10046724 3300014497 Bacteria 2152
85 Ga0157379_10046631 3300014968 Bacteria 3866
86 Ga0157376_10020112 3300014969 Bacteria 5158
87 Ga0157376_10045760 3300014969 Bacteria 3605
88 Ga0157376_10235259 3300014969 Unclassified 1704
89 Ga0157376_10326480 3300014969 Bacteria 1460
90 Ga0182007_10007638 3300015262 Bacteria 4511
91 Ga0163161_10019287 3300017792 Bacteria 4783
92 Ga0213875_10020988 3300021388 Bacteria 3131
93 Ga0213875_10257892 3300021388 Bacteria 823
94 Ga0213871_10004153 3300021441 Bacteria 2871
95 Ga0213871_10017969 3300021441 Bacteria 1724
96 Ga0209455_1000026 3300025272 Bacteria 653778
97 Ga0207697_10005384 3300025315 Bacteria 5950
98 Ga0207682_10031733 3300025893 Bacteria 2122
99 Ga0207680_10003062 3300025903 Bacteria 7847
100 Ga0207645_10083346 3300025907 Bacteria 2051
101 Ga0207643_10171381 3300025908 Bacteria 1310
102 Ga0207705_10005273 3300025909 Bacteria 9678
103 Ga0207705_10066332 3300025909 Bacteria 2610
104 Ga0207705_10115664 3300025909 Bacteria 1985
105 Ga0207684_10953593 3300025910 Bacteria 719
106 Ga0207707_10212299 3300025912 Bacteria 1686
107 Ga0207695_10022294 3300025913 Bacteria 7197
108 Ga0207695_10186840 3300025913 Bacteria 1991
109 Ga0207671_10100804 3300025914 Bacteria 2187
110 Ga0207671_10427474 3300025914 Bacteria 1054
111 Ga0207657_10605901 3300025919 Bacteria 854
112 Ga0207649_10045899 3300025920 Bacteria 2681
113 Ga0207681_10472109 3300025923 Bacteria 1023
114 Ga0207694_10412520 3300025924 Bacteria 1124
115 Ga0207694_10638685 3300025924 Bacteria 897
116 Ga0207650_10000323 3300025925 Bacteria 46579
117 Ga0207650_10022978 3300025925 Bacteria 4418
118 Ga0207650_10978034 3300025925 Bacteria 720
119 Ga0207659_10002975 3300025926 Bacteria 10094
120 Ga0207700_10804604 3300025928 Bacteria 841
121 Ga0207644_10006339 3300025931 Bacteria 7703
122 Ga0207670_10037213 3300025936 Bacteria 3170
123 Ga0207665_10539685 3300025939 Bacteria 905
124 Ga0207691_10099079 3300025940 Bacteria 2603
125 Ga0207711_10035257 3300025941 Bacteria 4240
126 Ga0207679_10096908 3300025945 Bacteria 2296
127 Ga0207667_10007803 3300025949 Bacteria 12791
128 Ga0207651_10037172 3300025960 Bacteria 3187
129 Ga0207668_10044605 3300025972 Bacteria 3018
130 Ga0207640_10745711 3300025981 Bacteria 844
131 Ga0207658_10020481 3300025986 Bacteria 4579
132 Ga0207703_10017390 3300026035 Bacteria 5613
133 Ga0207678_10004521 3300026067 Bacteria 12508
134 Ga0207641_10096893 3300026088 Bacteria 2591
135 Ga0207648_10082395 3300026089 Bacteria 2806
136 Ga0207676_10004086 3300026095 Bacteria 10292
137 Ga0207674_10139806 3300026116 Bacteria 2381
138 Ga0207675_100178416 3300026118 Bacteria 2033
139 Ga0207683_10017993 3300026121 Bacteria 6026
140 Ga0207698_10047655 3300026142 Bacteria 3248
141 Ga0265765_1011952 3300030879 Bacteria 980
142 Ga0373925_1058929 3300037068 Bacteria 668
143 Ga0400484_15785 3300038725 Bacteria 7244
144 Ga0436360_0272651 3300039438 Bacteria 1937
145 Ga0436361_0510054 3300039447 Bacteria 18385
146 Ga0436363_0381857 3300039450 Bacteria 1589
147 Ga0436362_0748607 3300039453 Bacteria 1143
148 Ga0453683_0000041 3300044673 Bacteria 219754
149 Ga0453683_0000375 3300044673 Bacteria 53450
150 Ga0453683_0208351 3300044673 Bacteria 1242
151 Ga0453684_0025816 3300044712 Bacteria 8514
152 Ga0453684_0415210 3300044712 Bacteria 1504
153 Ga0495629_0000034 3300046459 Bacteria 118709
154 Ga0495629_0018693 3300046459 Unclassified 4954
155 Ga0495638_0389702 3300046460 Bacteria 725
156 Ga0495653_0002022 3300046463 Bacteria 15964
157 Ga0495653_0004205 3300046463 Bacteria 11654
158 Ga0495653_0143170 3300046463 Unclassified 1679
159 Ga0495580_0000633 3300046472 Bacteria 29782
160 Ga0495582_0045646 3300046473 Unclassified 2413
161 Ga0495582_0057124 3300046473 Bacteria 2151
162 Ga0495664_0001709 3300046477 Bacteria 11654
163 Ga0495608_0003394 3300046511 Bacteria 11403
164 Ga0495608_0071637 3300046511 Bacteria 2261
165 Ga0495628_0004996 3300046516 Bacteria 11654
166 Ga0495630_0003028 3300046517 Bacteria 11654
167 Ga0495630_0261301 3300046517 Bacteria 1323
168 Ga0495652_0005706 3300046529 Bacteria 11654
169 Ga0495665_0001764 3300046531 Bacteria 11654
170 Ga0495665_0491519 3300046531 Bacteria 618
171 Ga0495586_0001813 3300046535 Bacteria 11654
172 Ga0495587_0008061 3300046536 Bacteria 6793
173 Ga0495645_0002891 3300046543 Bacteria 11654
174 Ga0495645_0145799 3300046543 Bacteria 1649
175 Ga0495667_0467321 3300046559 Bacteria 792
176 Ga0495634_0004029 3300046642 Bacteria 11654
177 Ga0495657_0459964 3300046675 Bacteria 744
178 Ga0495599_0002060 3300046678 Bacteria 11654
179 Ga0495623_0002732 3300046679 Bacteria 11654
180 Ga0495646_0002390 3300046680 Bacteria 11510
181 Ga0495646_0346418 3300046680 Bacteria 779
182 Ga0495624_0000373 3300046690 Bacteria 35676
183 Ga0495624_0003581 3300046690 Bacteria 11501
184 Ga0495600_0001925 3300046809 Bacteria 11654
185 Ga0495581_0001925 3300047315 Bacteria 11646
186 Ga0495604_0004045 3300047317 Bacteria 11654
187 Ga0495674_0000866 3300047319 Bacteria 28915
188 Ga0495674_0006012 3300047319 Bacteria 11654
189 Ga0495674_0949527 3300047319 Bacteria 661
190 Ga0495676_0028088 3300047321 Bacteria 4813
191 Ga0495680_0005705 3300047322 Bacteria 11654
192 Ga0495680_0305350 3300047322 Bacteria 1116
193 Ga0495683_0000808 3300047323 Bacteria 22275
194 Ga0495675_0002187 3300047444 Bacteria 11654
195 Ga0495684_0003876 3300047471 Bacteria 11654
196 Ga0495686_0043069 3300047472 Bacteria 2865
197 Ga0495593_0002209 3300047673 Bacteria 11654
198 Ga0495593_0004795 3300047673 Bacteria 8027
199 Ga0495602_0007205 3300048088 Bacteria 11654
200 Ga0496100_0471954 3300048903 Bacteria 964
201 Ga0496101_0323177 3300048904 Bacteria 1211
202 Ga0496101_0543647 3300048904 Bacteria 918
203 Ga0496102_0114700 3300048905 Bacteria 2514
204 Ga0496104_0187595 3300048907 Bacteria 1978
205 Ga0496105_0145265 3300048908 Bacteria 1951
206 Ga0496107_0399616 3300048910 Bacteria 1022
207 Ga0496107_0431223 3300048910 Bacteria 980
208 Ga0496108_0048361 3300048911 Bacteria 3556
209 Ga0496109_0006409 3300048912 Bacteria 9908
210 Ga0496115_0450594 3300048918 Bacteria 1039
211 Ga0496124_0000197 3300048927 Bacteria 119302
212 Ga0501032_0512016 3300049569 Bacteria 766
213 Ga0501033_0654786 3300049570 Bacteria 717
214 Ga0501034_0253300 3300049571 Bacteria 1704
215 Ga0501038_0512357 3300049574 Bacteria 916
216 Ga0501043_0536742 3300049579 Bacteria 870
217 Ga0501046_0654542 3300049580 Bacteria 742
218 Ga0501048_0437488 3300049582 Bacteria 936
219 Ga0501044_0020713 3300049823 Bacteria 7019
220 Ga0500559_0003916 3300053136 Bacteria 7189
221 2528205391 2527291627 Bacteria 5309833
222 2579750135 2576861822 Bacteria 5004595
223 2710603741 2710264753 Bacteria 5455564
224 2885388562 2885383462 Bacteria 9473874
225 2891092691 2891088606 Bacteria 4762464
226 637879595 637000116 Bacteria 5433628
227 8055304264 8055301274 Bacteria 8587385
228 Ga0099796_10050217
229 MRS1b_contig_3155663
230 rootH2_10077556
231 Ga0055529_1000060
232 JGI25405J52794_10002006
233 Ga0058863_10785865
234 Ga0065712_10121019
235 Ga0065715_10286051
236 Ga0070658_10009842
237 Ga0070658_10020862
238 Ga0070658_10027767
239 Ga0070676_10012855
240 Ga0070683_100445963
241 Ga0070690_100016491
242 Ga0070670_100052413
243 Ga0070666_10004243
244 Ga0070660_100185272
245 Ga0070660_100756391
246 Ga0070689_100003602
247 Ga0070687_100634219
248 Ga0070661_100066600
249 Ga0070668_100038337
250 Ga0070669_100202454
251 Ga0070675_100002362
252 Ga0070671_100016307
253 Ga0070688_100043187
254 Ga0070667_100007651
255 Ga0070710_10358068
256 Ga0070663_100002274
257 Ga0070681_10130540
258 Ga0068867_100051278
259 Ga0070685_10007814
260 Ga0070698_100578996
261 Ga0070684_100479031
262 Ga0070672_100090307
263 Ga0068855_100011518
264 Ga0070664_100007075
265 Ga0068857_100080658
266 Ga0068854_100712299
267 Ga0068852_100003099
268 Ga0068852_100015385
269 Ga0068859_100005239
270 Ga0068864_100001117
271 Ga0068861_100143671
272 Ga0068851_10095573
273 Ga0068870_10013974
274 Ga0068863_100013495
275 Ga0068858_100023624
276 Ga0068862_100634550
277 Ga0081455_10017229
278 Ga0081538_10037126
279 Ga0097621_100005780
280 Ga0068871_100043186
281 Ga0068865_100099112
282 Ga0097620_100005239
283 Ga0105240_10040942
284 Ga0105240_10107083
285 Ga0105240_11121812
286 Ga0114129_10188062
287 Ga0105241_10173439
288 Ga0105248_10071993
289 Ga0105237_10018411
290 Ga0105237_10292860
291 Ga0105238_10728847
292 Ga0105238_10966925
293 Ga0105239_10086701
294 Ga0157370_10005035
295 Ga0157369_10001504
296 Ga0157369_10980009
297 Ga0157374_10003493
298 Ga0157374_10004112
299 Ga0157374_10006484
300 Ga0157374_10017541
301 Ga0157374_10228777
302 Ga0157378_10033740
303 Ga0163162_10029885
304 Ga0163162_10552929
305 Ga0163162_11225726
306 Ga0157372_10605430
307 Ga0157372_11122168
308 Ga0157375_10056163
309 Ga0157375_10990496
310 Ga0163163_10000768
311 Ga0182008_10046724
312 Ga0157379_10046631
313 Ga0157376_10020112
314 Ga0157376_10045760
315 Ga0157376_10235259
316 Ga0157376_10326480
317 Ga0182007_10007638
318 Ga0163161_10019287
319 Ga0213875_10020988
320 Ga0213875_10257892
321 Ga0213871_10004153
322 Ga0213871_10017969
323 Ga0209455_1000026
324 Ga0207697_10005384
325 Ga0207682_10031733
326 Ga0207680_10003062
327 Ga0207645_10083346
328 Ga0207643_10171381
329 Ga0207705_10005273
330 Ga0207705_10066332
331 Ga0207705_10115664
332 Ga0207684_10953593
333 Ga0207707_10212299
334 Ga0207695_10022294
335 Ga0207695_10186840
336 Ga0207671_10100804
337 Ga0207671_10427474
338 Ga0207657_10605901
339 Ga0207649_10045899
340 Ga0207681_10472109
341 Ga0207694_10412520
342 Ga0207694_10638685
343 Ga0207650_10000323
344 Ga0207650_10022978
345 Ga0207650_10978034
346 Ga0207659_10002975
347 Ga0207700_10804604
348 Ga0207644_10006339
349 Ga0207670_10037213
350 Ga0207665_10539685
351 Ga0207691_10099079
352 Ga0207711_10035257
353 Ga0207679_10096908
354 Ga0207667_10007803
355 Ga0207651_10037172
356 Ga0207668_10044605
357 Ga0207640_10745711
358 Ga0207658_10020481
359 Ga0207703_10017390
360 Ga0207678_10004521
361 Ga0207641_10096893
362 Ga0207648_10082395
363 Ga0207676_10004086
364 Ga0207674_10139806
365 Ga0207675_100178416
366 Ga0207683_10017993
367 Ga0207698_10047655
368 Ga0265765_1011952
369 Ga0373925_1058929
370 Ga0400484_15785
371 Ga0436360_0272651
372 Ga0436361_0510054
373 Ga0436363_0381857
374 Ga0436362_0748607
375 Ga0453683_0000041
376 Ga0453683_0000375
377 Ga0453683_0208351
378 Ga0453684_0025816
379 Ga0453684_0415210
380 Ga0495629_0000034
381 Ga0495629_0018693
382 Ga0495638_0389702
383 Ga0495653_0002022
384 Ga0495653_0004205
385 Ga0495653_0143170
386 Ga0495580_0000633
387 Ga0495582_0045646
388 Ga0495582_0057124
389 Ga0495664_0001709
390 Ga0495608_0003394
391 Ga0495608_0071637
392 Ga0495628_0004996
393 Ga0495630_0003028
394 Ga0495630_0261301
395 Ga0495652_0005706
396 Ga0495665_0001764
397 Ga0495665_0491519
398 Ga0495586_0001813
399 Ga0495587_0008061
400 Ga0495645_0002891
401 Ga0495645_0145799
402 Ga0495667_0467321
403 Ga0495634_0004029
404 Ga0495657_0459964
405 Ga0495599_0002060
406 Ga0495623_0002732
407 Ga0495646_0002390
408 Ga0495646_0346418
409 Ga0495624_0000373
410 Ga0495624_0003581
411 Ga0495600_0001925
412 Ga0495581_0001925
413 Ga0495604_0004045
414 Ga0495674_0000866
415 Ga0495674_0006012
416 Ga0495674_0949527
417 Ga0495676_0028088
418 Ga0495680_0005705
419 Ga0495680_0305350
420 Ga0495683_0000808
421 Ga0495675_0002187
422 Ga0495684_0003876
423 Ga0495686_0043069
424 Ga0495593_0002209
425 Ga0495593_0004795
426 Ga0495602_0007205
427 Ga0496100_0471954
428 Ga0496101_0323177
429 Ga0496101_0543647
430 Ga0496102_0114700
431 Ga0496104_0187595
432 Ga0496105_0145265
433 Ga0496107_0399616
434 Ga0496107_0431223
435 Ga0496108_0048361
436 Ga0496109_0006409
437 Ga0496115_0450594
438 Ga0496124_0000197
439 Ga0501032_0512016
440 Ga0501033_0654786
441 Ga0501034_0253300
442 Ga0501038_0512357
443 Ga0501043_0536742
444 Ga0501046_0654542
445 Ga0501048_0437488
446 Ga0501044_0020713
447 Ga0500559_0003916
448 2528205391
449 2579750135
450 2710603741
451 2885388562
452 2891092691
453 637879595
454 8055304264

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02796

HTH_7

Helix-turn-helix domain of resolvase

160

204

0.97

PF00239

Resolvase

Resolvase, N terminal domain

24

158

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
5af3-assembly1.cif.gz_B x-ray crystal structure of rv2018 from mycobacterium tuberculosis 0.9087 166 197
5af3-assembly1.cif.gz_A x-ray crystal structure of rv2018 from mycobacterium tuberculosis 0.9075 166 197
8b4h-assembly1.cif.gz_B ista transposase cleaved donor complex 0.8942 161 197
1hcr-assembly1.cif.gz_A hin recombinase bound to dna: the origin of specificity in major and minor groove interactions 0.8859 156 196
8b4h-assembly1.cif.gz_D ista transposase cleaved donor complex 0.8819 161 199
ID Description Score Start End Superfamily
1jkpC00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9038 156 196 1.10.10.60
1hcrA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8859 156 196 1.10.10.60
1jkqC00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8736 157 200 1.10.10.60
1jj8C00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8683 156 200 1.10.10.60
1u78A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8371 161 198 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A8A5TKS4-F1-model_v4 Recombinase family protein 0.9602 17 112 GO:0000150
GO:0003677
GO:0015074
AF-A0A740Q9B8-F1-model_v4 Recombinase family protein 0.9527 17 148 GO:0000150
GO:0003677
GO:0015074
AF-A0A705X987-F1-model_v4 Recombinase family protein 0.9513 17 106 GO:0000150
GO:0003677
GO:0015074
AF-A0A3R8Z6W7-F1-model_v4 deleted 0.9444 17 129
AF-A0A2R7RCR8-F1-model_v4 Transposase 0.9414 18 119 GO:0000150
GO:0003677
GO:0015074

Map