F339830

General Info

Members Datasets Scaffolds Average Seq Length
227 147 454 215

Family's Representative Sequence

Representative Sequence 3300007265|Ga0099794_10007334|Ga0099794_100073343
Length 245
Sequence VRERESSAESVEKVATIFMNKHEVRALIEEIGIVPVVRAASPQEARFAAEAVWQGGIPIVEITMTVPGALDLISELVKTMPKLLVGAGTVVNQDLALQCFDAGAQFLVTPGFSPQTVAAAHNLDLLIMAGALTPTEVMAAWDAGVAFVKIFPCGNLGGPSYIKALKGPLPQVPLVPTGGVNLETAADYIRAGAAALGVGGELILKHAIQERKPELISNLATRYAQLVKEARNPTAAKSERIAEAR

Samples

Sample ID Description Type Environment
1 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
2 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
21 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
22 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
25 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
26 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
29 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
30 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
31 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
36 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
37 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
38 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
39 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
50 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
51 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
52 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
53 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
75 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
76 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
77 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
78 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
79 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
80 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
81 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
82 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
83 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
84 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
85 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
86 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
87 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
88 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
89 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
90 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
91 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
92 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
93 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
94 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
95 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
96 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
97 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
98 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
99 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
100 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
101 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
102 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
103 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
104 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
105 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
106 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
107 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
108 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
109 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
110 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
111 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
112 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
113 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
114 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
115 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
116 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
117 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
118 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
119 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
120 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
121 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
122 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
123 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
124 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
125 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
126 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
127 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
128 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
129 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
130 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
131 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
132 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
133 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
134 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
135 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
136 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
137 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
138 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
139 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
140 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
141 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
142 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
143 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
144 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
145 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
146 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
147 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.24
Metatranscriptomes 1.76
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.96
Rhizosphere 95.15
Stem 0
Stem Tuber 0
Unclassified 18.94

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0099794_10007334 3300007265 Bacteria 4524
2 Ga0068869_100002368 3300005334 Bacteria 11339
3 Ga0070680_100065199 3300005336 Bacteria 2985
4 Ga0070680_100619693 3300005336 Bacteria 929
5 Ga0070703_10007569 3300005406 Bacteria 3051
6 Ga0070709_10057153 3300005434 Bacteria 2470
7 Ga0070709_10443630 3300005434 Bacteria 977
8 Ga0070714_100004032 3300005435 Bacteria 11040
9 Ga0070714_100041055 3300005435 Bacteria 3903
10 Ga0070714_100048126 3300005435 Bacteria 3625
11 Ga0070714_100446416 3300005435 Unclassified 1228
12 Ga0070714_100482608 3300005435 Unclassified 1180
13 Ga0070713_100005570 3300005436 Bacteria 8628
14 Ga0070713_100022014 3300005436 Bacteria 4917
15 Ga0070713_100032941 3300005436 Bacteria 4145
16 Ga0070713_100044763 3300005436 Unclassified 3623
17 Ga0070713_100151535 3300005436 Bacteria 2063
18 Ga0070711_100006221 3300005439 Bacteria 7186
19 Ga0070711_100011085 3300005439 Bacteria 5593
20 Ga0070711_100427178 3300005439 Unclassified 1081
21 Ga0070700_100000020 3300005441 Bacteria 135275
22 Ga0070694_100011792 3300005444 Bacteria 5419
23 Ga0070708_100001889 3300005445 Bacteria 16086
24 Ga0070708_100018222 3300005445 Bacteria 5875
25 Ga0070708_100127792 3300005445 Unclassified 2351
26 Ga0070681_10074949 3300005458 Bacteria 3344
27 Ga0070681_10348195 3300005458 Unclassified 1392
28 Ga0070706_100002783 3300005467 Bacteria 17484
29 Ga0070707_100381294 3300005468 Bacteria 1369
30 Ga0070698_100009293 3300005471 Bacteria 10548
31 Ga0070698_100027668 3300005471 Bacteria 5894
32 Ga0070698_100346858 3300005471 Bacteria 1416
33 Ga0070699_100111346 3300005518 Unclassified 2404
34 Ga0070699_100683650 3300005518 Bacteria 937
35 Ga0070679_100195234 3300005530 Bacteria 1992
36 Ga0070697_100000290 3300005536 Bacteria 40181
37 Ga0070697_100001570 3300005536 Bacteria 17415
38 Ga0070697_100022512 3300005536 Bacteria 5003
39 Ga0070697_100081686 3300005536 Bacteria 2663
40 Ga0070672_100096823 3300005543 Bacteria 2388
41 Ga0070695_100012678 3300005545 Bacteria 5060
42 Ga0070696_100038440 3300005546 Bacteria 3303
43 Ga0070696_100050429 3300005546 Bacteria 2893
44 Ga0070693_100000218 3300005547 Bacteria 26640
45 Ga0070704_100296821 3300005549 Unclassified 1345
46 Ga0068854_100467666 3300005578 Unclassified 1056
47 Ga0068870_10086415 3300005840 Bacteria 1745
48 Ga0081540_1081100 3300005983 Bacteria 1460
49 Ga0070717_10004601 3300006028 Bacteria 9990
50 Ga0070717_10005413 3300006028 Bacteria 9321
51 Ga0070717_10028503 3300006028 Bacteria 4471
52 Ga0070717_10056755 3300006028 Bacteria 3236
53 Ga0070717_10076422 3300006028 Bacteria 2803
54 Ga0070717_10856542 3300006028 Unclassified 827
55 Ga0070715_10399703 3300006163 Unclassified 763
56 Ga0070716_100100695 3300006173 Bacteria 1770
57 Ga0070716_100135726 3300006173 Bacteria 1562
58 Ga0070716_100184761 3300006173 Bacteria 1372
59 Ga0070716_100353806 3300006173 Bacteria 1040
60 Ga0070712_100008366 3300006175 Bacteria 6506
61 Ga0070712_100038226 3300006175 Bacteria 3279
62 Ga0097621_100346370 3300006237 Unclassified 1320
63 Ga0068871_100233555 3300006358 Unclassified 1597
64 Ga0075428_101098407 3300006844 Bacteria 840
65 Ga0075428_101108233 3300006844 Bacteria 836
66 Ga0075431_100025973 3300006847 Bacteria 6004
67 Ga0075434_100061713 3300006871 Bacteria 3730
68 Ga0075429_100669903 3300006880 Bacteria 909
69 Ga0075436_100001089 3300006914 Bacteria 18302
70 Ga0075436_100059346 3300006914 Bacteria 2643
71 Ga0075436_100060273 3300006914 Bacteria 2621
72 Ga0075436_100070343 3300006914 Bacteria 2419
73 Ga0075435_100003834 3300007076 Bacteria 10256
74 Ga0075435_100348225 3300007076 Bacteria 1270
75 Ga0099794_10006398 3300007265 Bacteria 4767
76 Ga0099794_10031550 3300007265 Unclassified 2482
77 Ga0099794_10067424 3300007265 Bacteria 1748
78 Ga0099794_10067625 3300007265 Bacteria 1745
79 Ga0099794_10294911 3300007265 Bacteria 839
80 Ga0099795_10034772 3300007788 Bacteria 1758
81 Ga0105240_10004021 3300009093 Bacteria 22639
82 Ga0105240_10117626 3300009093 Bacteria 3204
83 Ga0105240_10364235 3300009093 Bacteria 1636
84 Ga0105240_10385844 3300009093 Bacteria 1581
85 Ga0114129_10090718 3300009147 Bacteria 4235
86 Ga0105241_10011588 3300009174 Bacteria 6464
87 Ga0105237_10522526 3300009545 Unclassified 1193
88 Ga0157373_10053042 3300013100 Bacteria 2883
89 Ga0157370_10139299 3300013104 Bacteria 2261
90 Ga0157369_10021952 3300013105 Bacteria 7134
91 Ga0157369_10186803 3300013105 Bacteria 2179
92 Ga0157372_10012156 3300013307 Bacteria 9170
93 Ga0157372_10021878 3300013307 Bacteria 6912
94 Ga0157372_10032832 3300013307 Bacteria 5695
95 Ga0157372_10098314 3300013307 Bacteria 3339
96 Ga0157372_10291144 3300013307 Bacteria 1899
97 Ga0157372_11279820 3300013307 Unclassified 846
98 Ga0157375_10202408 3300013308 Bacteria 2142
99 Ga0157376_10001061 3300014969 Bacteria 17998
100 Ga0182005_1093320 3300015265 Unclassified 838
101 Ga0224572_1006585 3300024225 Unclassified 2104
102 Ga0224572_1015560 3300024225 Bacteria 1457
103 Ga0228598_1000638 3300024227 Bacteria 7369
104 Ga0228598_1012647 3300024227 Unclassified 1676
105 Ga0207653_10006317 3300025885 Bacteria 3695
106 Ga0207685_10065119 3300025905 Unclassified 1458
107 Ga0207699_10093550 3300025906 Bacteria 1892
108 Ga0207699_10306185 3300025906 Bacteria 1111
109 Ga0207699_10440313 3300025906 Bacteria 933
110 Ga0207643_10099793 3300025908 Bacteria 1702
111 Ga0207705_10072106 3300025909 Bacteria 2504
112 Ga0207684_10008002 3300025910 Bacteria 9441
113 Ga0207654_10011255 3300025911 Bacteria 4560
114 Ga0207695_10008025 3300025913 Bacteria 13287
115 Ga0207695_10013220 3300025913 Bacteria 9850
116 Ga0207693_10033660 3300025915 Bacteria 4043
117 Ga0207693_10060998 3300025915 Bacteria 2954
118 Ga0207693_10119351 3300025915 Bacteria 2071
119 Ga0207693_10144131 3300025915 Bacteria 1873
120 Ga0207663_10000431 3300025916 Bacteria 18254
121 Ga0207663_10349015 3300025916 Unclassified 1120
122 Ga0207663_10430762 3300025916 Unclassified 1014
123 Ga0207660_10078201 3300025917 Bacteria 2424
124 Ga0207652_10198210 3300025921 Unclassified 1807
125 Ga0207652_10895767 3300025921 Bacteria 784
126 Ga0207646_10006398 3300025922 Bacteria 12180
127 Ga0207700_10226288 3300025928 Bacteria 1588
128 Ga0207700_10242557 3300025928 Bacteria 1536
129 Ga0207664_10142042 3300025929 Bacteria 2032
130 Ga0207665_10053525 3300025939 Bacteria 2721
131 Ga0207665_10077611 3300025939 Bacteria 2280
132 Ga0207665_10205783 3300025939 Bacteria 1436
133 Ga0207689_10002712 3300025942 Bacteria 16379
134 Ga0207708_10000021 3300026075 Bacteria 186005
135 Ga0207702_10427829 3300026078 Bacteria 1281
136 Ga0207675_100284361 3300026118 Bacteria 1608
137 Ga0209588_1007127 3300027671 Bacteria 3279
138 Ga0209588_1031950 3300027671 Bacteria 1685
139 Ga0265354_1000024 3300028016 Bacteria 24424
140 Ga0265762_1012195 3300030760 Bacteria 1540
141 Ga0265770_1025303 3300030878 Bacteria 965
142 Ga0265760_10009246 3300031090 Unclassified 2816
143 Ga0265760_10024882 3300031090 Bacteria 1746
144 Ga0307509_10366318 3300031507 Bacteria 1159
145 Ga0307416_100006380 3300032002 Bacteria 7378
146 Ga0307415_100057898 3300032126 Bacteria 2665
147 Ga0307510_10172224 3300033180 Bacteria 1742
148 Ga0373926_0000117 3300035083 Bacteria 16140
149 Ga0373932_0067578 3300035112 Bacteria 1101
150 Ga0373941_0111296 3300035115 Unclassified 965
151 Ga0373945_0004735 3300035116 Bacteria 4334
152 Ga0373954_0094397 3300035118 Unclassified 1439
153 Ga0373956_0069396 3300035119 Unclassified 1606
154 Ga0373957_0123360 3300035120 Bacteria 1050
155 Ga0373943_0272308 3300035170 Bacteria 955
156 Ga0373942_0025879 3300035207 Bacteria 1516
157 Ga0373924_0000156 3300035410 Bacteria 20137
158 Ga0373935_0058540 3300035692 Bacteria 2461
159 Ga0373935_0177433 3300035692 Bacteria 1461
160 Ga0373933_0533729 3300035724 Unclassified 769
161 Ga0373947_0788541 3300035725 Bacteria 649
162 Ga0373937_0401603 3300036401 Unclassified 1300
163 Ga0373937_0654311 3300036401 Unclassified 996
164 Ga0373925_0088902 3300037068 Bacteria 2359
165 Ga0395901_1103022 3300038443 Bacteria 764
166 Ga0466963_0013873 3300044694 Bacteria 4961
167 Ga0466968_0045990 3300044735 Bacteria 1854
168 Ga0466957_0146295 3300044842 Bacteria 1526
169 Ga0466967_0023505 3300045976 Bacteria 5052
170 Ga0495603_0040408 3300046455 Bacteria 2792
171 Ga0495629_0056914 3300046459 Bacteria 2734
172 Ga0495651_0392322 3300046462 Unclassified 908
173 Ga0495580_0080754 3300046472 Bacteria 2266
174 Ga0495580_0099011 3300046472 Unclassified 2028
175 Ga0495580_0136701 3300046472 Bacteria 1699
176 Ga0495580_0179683 3300046472 Bacteria 1461
177 Ga0495580_0435285 3300046472 Unclassified 881
178 Ga0495582_0070432 3300046473 Bacteria 1934
179 Ga0495582_0108130 3300046473 Bacteria 1561
180 Ga0495639_0012425 3300046475 Bacteria 3672
181 Ga0495594_0043470 3300046499 Bacteria 2463
182 Ga0495628_0073958 3300046516 Bacteria 2655
183 Ga0495630_0191830 3300046517 Unclassified 1559
184 Ga0495666_0160362 3300046526 Unclassified 1043
185 Ga0495642_0095669 3300046528 Bacteria 1260
186 Ga0495665_0032671 3300046531 Bacteria 2784
187 Ga0495640_0143036 3300046533 Unclassified 1541
188 Ga0495622_0038492 3300046557 Bacteria 2227
189 Ga0495588_0052976 3300046674 Bacteria 2092
190 Ga0495623_0194590 3300046679 Unclassified 1169
191 Ga0495623_0364407 3300046679 Bacteria 785
192 Ga0495646_0100905 3300046680 Unclassified 1655
193 Ga0495647_0006129 3300046681 Bacteria 3965
194 Ga0495658_0050957 3300046683 Bacteria 2343
195 Ga0495624_0049639 3300046690 Bacteria 2661
196 Ga0495624_0390095 3300046690 Unclassified 836
197 Ga0495581_0047950 3300047315 Bacteria 2468
198 Ga0495604_0037819 3300047317 Unclassified 3799
199 Ga0495674_0063384 3300047319 Bacteria 3216
200 Ga0495676_0004735 3300047321 Bacteria 12459
201 Ga0495680_0151592 3300047322 Unclassified 1689
202 Ga0495602_0209821 3300048088 Unclassified 1479
203 Ga0495614_0025713 3300048089 Bacteria 2539
204 Ga0496100_0048782 3300048903 Bacteria 2735
205 Ga0496101_0138294 3300048904 Bacteria 1855
206 Ga0496104_0103351 3300048907 Bacteria 2729
207 Ga0496110_0009373 3300048913 Bacteria 7924
208 Ga0496111_0008907 3300048914 Bacteria 6672
209 Ga0496112_0056371 3300048915 Bacteria 3867
210 Ga0496112_0070621 3300048915 Bacteria 3451
211 Ga0496113_0010546 3300048916 Bacteria 6112
212 Ga0496115_0144002 3300048918 Bacteria 1966
213 Ga0501217_003149 3300049661 Bacteria 3310
214 Ga0501227_042007 3300049665 Bacteria 1132
215 Ga0501259_097246 3300049688 Bacteria 670
216 Ga0501225_0002565 3300049705 Bacteria 5594
217 Ga0501245_085505 3300049708 Unclassified 616
218 nmdc:mga05p37_93249_c1 3300050507 Bacteria 3710
219 nmdc:mga06r32_5101_c2 3300050510 Bacteria 4722
220 nmdc:mga0n895_58918_c1 3300050512 Bacteria 3788
221 nmdc:mga0rr50_11483_c1 3300050513 Bacteria 5674
222 nmdc:mga08x19_114179_c1 3300050514 Bacteria 1804
223 nmdc:mga08x19_2616_c1 3300050514 Bacteria 10923
224 nmdc:mga08x19_387105_c1 3300050514 Bacteria 980
225 nmdc:mga08x19_437006_c1 3300050514 Bacteria 920
226 nmdc:mga08x19_5720_c1 3300050514 Bacteria 7349
227 Ga0495619_0106352 3300053085 Bacteria 1913
228 Ga0099794_10007334
229 Ga0068869_100002368
230 Ga0070680_100065199
231 Ga0070680_100619693
232 Ga0070703_10007569
233 Ga0070709_10057153
234 Ga0070709_10443630
235 Ga0070714_100004032
236 Ga0070714_100041055
237 Ga0070714_100048126
238 Ga0070714_100446416
239 Ga0070714_100482608
240 Ga0070713_100005570
241 Ga0070713_100022014
242 Ga0070713_100032941
243 Ga0070713_100044763
244 Ga0070713_100151535
245 Ga0070711_100006221
246 Ga0070711_100011085
247 Ga0070711_100427178
248 Ga0070700_100000020
249 Ga0070694_100011792
250 Ga0070708_100001889
251 Ga0070708_100018222
252 Ga0070708_100127792
253 Ga0070681_10074949
254 Ga0070681_10348195
255 Ga0070706_100002783
256 Ga0070707_100381294
257 Ga0070698_100009293
258 Ga0070698_100027668
259 Ga0070698_100346858
260 Ga0070699_100111346
261 Ga0070699_100683650
262 Ga0070679_100195234
263 Ga0070697_100000290
264 Ga0070697_100001570
265 Ga0070697_100022512
266 Ga0070697_100081686
267 Ga0070672_100096823
268 Ga0070695_100012678
269 Ga0070696_100038440
270 Ga0070696_100050429
271 Ga0070693_100000218
272 Ga0070704_100296821
273 Ga0068854_100467666
274 Ga0068870_10086415
275 Ga0081540_1081100
276 Ga0070717_10004601
277 Ga0070717_10005413
278 Ga0070717_10028503
279 Ga0070717_10056755
280 Ga0070717_10076422
281 Ga0070717_10856542
282 Ga0070715_10399703
283 Ga0070716_100100695
284 Ga0070716_100135726
285 Ga0070716_100184761
286 Ga0070716_100353806
287 Ga0070712_100008366
288 Ga0070712_100038226
289 Ga0097621_100346370
290 Ga0068871_100233555
291 Ga0075428_101098407
292 Ga0075428_101108233
293 Ga0075431_100025973
294 Ga0075434_100061713
295 Ga0075429_100669903
296 Ga0075436_100001089
297 Ga0075436_100059346
298 Ga0075436_100060273
299 Ga0075436_100070343
300 Ga0075435_100003834
301 Ga0075435_100348225
302 Ga0099794_10006398
303 Ga0099794_10031550
304 Ga0099794_10067424
305 Ga0099794_10067625
306 Ga0099794_10294911
307 Ga0099795_10034772
308 Ga0105240_10004021
309 Ga0105240_10117626
310 Ga0105240_10364235
311 Ga0105240_10385844
312 Ga0114129_10090718
313 Ga0105241_10011588
314 Ga0105237_10522526
315 Ga0157373_10053042
316 Ga0157370_10139299
317 Ga0157369_10021952
318 Ga0157369_10186803
319 Ga0157372_10012156
320 Ga0157372_10021878
321 Ga0157372_10032832
322 Ga0157372_10098314
323 Ga0157372_10291144
324 Ga0157372_11279820
325 Ga0157375_10202408
326 Ga0157376_10001061
327 Ga0182005_1093320
328 Ga0224572_1006585
329 Ga0224572_1015560
330 Ga0228598_1000638
331 Ga0228598_1012647
332 Ga0207653_10006317
333 Ga0207685_10065119
334 Ga0207699_10093550
335 Ga0207699_10306185
336 Ga0207699_10440313
337 Ga0207643_10099793
338 Ga0207705_10072106
339 Ga0207684_10008002
340 Ga0207654_10011255
341 Ga0207695_10008025
342 Ga0207695_10013220
343 Ga0207693_10033660
344 Ga0207693_10060998
345 Ga0207693_10119351
346 Ga0207693_10144131
347 Ga0207663_10000431
348 Ga0207663_10349015
349 Ga0207663_10430762
350 Ga0207660_10078201
351 Ga0207652_10198210
352 Ga0207652_10895767
353 Ga0207646_10006398
354 Ga0207700_10226288
355 Ga0207700_10242557
356 Ga0207664_10142042
357 Ga0207665_10053525
358 Ga0207665_10077611
359 Ga0207665_10205783
360 Ga0207689_10002712
361 Ga0207708_10000021
362 Ga0207702_10427829
363 Ga0207675_100284361
364 Ga0209588_1007127
365 Ga0209588_1031950
366 Ga0265354_1000024
367 Ga0265762_1012195
368 Ga0265770_1025303
369 Ga0265760_10009246
370 Ga0265760_10024882
371 Ga0307509_10366318
372 Ga0307416_100006380
373 Ga0307415_100057898
374 Ga0307510_10172224
375 Ga0373926_0000117
376 Ga0373932_0067578
377 Ga0373941_0111296
378 Ga0373945_0004735
379 Ga0373954_0094397
380 Ga0373956_0069396
381 Ga0373957_0123360
382 Ga0373943_0272308
383 Ga0373942_0025879
384 Ga0373924_0000156
385 Ga0373935_0058540
386 Ga0373935_0177433
387 Ga0373933_0533729
388 Ga0373947_0788541
389 Ga0373937_0401603
390 Ga0373937_0654311
391 Ga0373925_0088902
392 Ga0395901_1103022
393 Ga0466963_0013873
394 Ga0466968_0045990
395 Ga0466957_0146295
396 Ga0466967_0023505
397 Ga0495603_0040408
398 Ga0495629_0056914
399 Ga0495651_0392322
400 Ga0495580_0080754
401 Ga0495580_0099011
402 Ga0495580_0136701
403 Ga0495580_0179683
404 Ga0495580_0435285
405 Ga0495582_0070432
406 Ga0495582_0108130
407 Ga0495639_0012425
408 Ga0495594_0043470
409 Ga0495628_0073958
410 Ga0495630_0191830
411 Ga0495666_0160362
412 Ga0495642_0095669
413 Ga0495665_0032671
414 Ga0495640_0143036
415 Ga0495622_0038492
416 Ga0495588_0052976
417 Ga0495623_0194590
418 Ga0495623_0364407
419 Ga0495646_0100905
420 Ga0495647_0006129
421 Ga0495658_0050957
422 Ga0495624_0049639
423 Ga0495624_0390095
424 Ga0495581_0047950
425 Ga0495604_0037819
426 Ga0495674_0063384
427 Ga0495676_0004735
428 Ga0495680_0151592
429 Ga0495602_0209821
430 Ga0495614_0025713
431 Ga0496100_0048782
432 Ga0496101_0138294
433 Ga0496104_0103351
434 Ga0496110_0009373
435 Ga0496111_0008907
436 Ga0496112_0056371
437 Ga0496112_0070621
438 Ga0496113_0010546
439 Ga0496115_0144002
440 Ga0501217_003149
441 Ga0501227_042007
442 Ga0501259_097246
443 Ga0501225_0002565
444 Ga0501245_085505
445 nmdc:mga05p37_93249_c1
446 nmdc:mga06r32_5101_c2
447 nmdc:mga0n895_58918_c1
448 nmdc:mga0rr50_11483_c1
449 nmdc:mga08x19_114179_c1
450 nmdc:mga08x19_2616_c1
451 nmdc:mga08x19_387105_c1
452 nmdc:mga08x19_437006_c1
453 nmdc:mga08x19_5720_c1
454 Ga0495619_0106352

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01081

Aldolase

KDPG and KHG aldolase

24

219

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
8di1-assembly1.cif.gz_A bfo2294: tannerella forsythia 2-keto-3-deoxy-6-phosphogluconate aldolase (kdpg) and 4-hydroxy-2-oxoglutarate aldolase (khg) 0.9097 4 189
2yw3-assembly2.cif.gz_E crystal structure analysis of the 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase from tthb1 0.8836 4 185
8di1-assembly1.cif.gz_A bfo2294: tannerella forsythia 2-keto-3-deoxy-6-phosphogluconate aldolase (kdpg) and 4-hydroxy-2-oxoglutarate aldolase (khg) 0.882 4 189
8e01-assembly1.cif.gz_A structure of engineered nano-cage fusion protein 0.8784 5 191
6ovi-assembly1.cif.gz_B crystal structure of kdpg aldolase from legionella pneumophila with pyruvate captured at low ph as a covalent carbinolamine intermediate 0.8753 4 178
ID Description Score Start End Superfamily
af_A0A1D6HW21_144_318_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9377 16 184 3.20.20.70
af_A0A1D6HW21_144_318_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.892 16 184 3.20.20.70
2yw3A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8885 4 184 3.20.20.70
1vlwB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8832 4 188 3.20.20.70
af_K7LFS0_36_255_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8709 4 191 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A4Y9R8I1-F1-model_v4 Bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14, EC 4.1.3.16) 0.9923 17 159 GO:0008675
GO:0008700
AF-A0A2V8EP46-F1-model_v4 2-dehydro-3-deoxyphosphogluconate aldolase 0.9923 16 130 GO:0016829
AF-A0A419EM39-F1-model_v4 Bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14, EC 4.1.3.16) 0.9814 18 190 GO:0008675
GO:0008700
AF-A0A7W0NXY9-F1-model_v4 Bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.9809 14 144 GO:0016829
AF-A0A6P0XPT2-F1-model_v4 Bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14, EC 4.1.3.16) 0.9802 43 185 GO:0008675
GO:0008700

Map