F339746

General Info

Members Datasets Scaffolds Average Seq Length
227 178 186 306

Family's Representative Sequence

Representative Sequence 3300005842|Ga0068858_100018202|Ga0068858_1000182025
Length 346
Sequence MGSRADKDGVPANAAQERDFDEMAAAIVARRMADLLPPIRVTALYRFARFAGPAALREPLVQLCDANHIKGTLLLAREGINGTIAGTSDAIENVLAHIRALPGCADLEVKDSAAASMPFHRMKVRLKREIVTMGEPDIDPLQGLGHYVAPADWNALIEQPDTILIDTRNDYEVKIGSFTGAVDPHTHSFRDFPAWFRAHRDTLLEGAAQPKIAMFCTGGIRCEKATAFLKAEGLDEVYHLQGGILKYLEEVPPEQSRWEGECFVFDERVSVTHGLATGTHALCRGCRMPVSPEDRASPLYEEGVSCPACHATRDEAQRAGYAERHRQALLAQARGEDHVGATYSRD

Samples

Sample ID Description Type Environment
1 2599185352 Sinorhizobium sp. NFACC03 Isolate Rhizoplane
2 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
3 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
4 2643221550 Mesorhizobium sp. Root552 Isolate Unclassified
5 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
6 2643221584 Caulobacter sp. Root656 Isolate Unclassified
7 2643221618 Ensifer sp. Root231 Isolate Unclassified
8 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
9 2643221688 Rhizobium sp. Root482 Isolate Unclassified
10 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
11 2648501241 Vibrio splendidus UCD-SED7 Isolate Rhizosphere
12 2651869818 Vibrio splendidus UCD-SED10 Isolate Rhizosphere
13 2657244999 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
14 2713897090 Paracoccus sphaerophysae HAMBI 3106 Isolate Nodule
15 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
16 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
17 2791355091 Sinorhizobium sp. FG01 Isolate Nodule
18 2802429268 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
19 2834578030 Paracoccus thiocyanatus SST Isolate Unclassified
20 2840878972 Albibacillus kandeliae J95 Isolate Rhizosphere
21 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
22 2849560528 Caulobacter zeae 410 Isolate Unclassified
23 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
24 2851153111 Caulobacter radicis 736 Isolate Unclassified
25 2855020534 Paracoccus endophyticus SYSUP0003 Isolate Stem Tuber
26 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
27 2891373044 Shinella sp. AETb1-6 Isolate Rhizosphere
28 2896253425 Aurantiacibacter rhizosphaerae GH3-10 Isolate Rhizosphere
29 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
30 2898795034 Rhodobacter sp. SGA-6-6 Isolate Rhizosphere
31 2899259804 Paracoccus aeridis JC501 Isolate Rhizosphere
32 2919497567 Shewanella putrefaciens 3469 Isolate Unclassified
33 2919679072 Pseudotabrizicola sp. 4114 Isolate Unclassified
34 2928972540 Brevundimonas sp. 1080 Isolate Rhizosphere
35 2977240413 Brevundimonas vesicularis SORGH_AS 431 Isolate Unclassified
36 2989349275 Shinella kummerowiae CCBAU 25048 Isolate Unclassified
37 3000017691 Rhodobacteraceae bacterium GH2-2 Isolate Rhizosphere
38 3000405567 Rhodobacteraceae bacterium LNNU 3342 Isolate Rhizosphere
39 3003930520 Sinorhizobium sp. BG8 Isolate Unclassified
40 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
41 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
42 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
43 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
44 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
45 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
46 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
47 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
48 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
49 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
50 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
51 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
52 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
53 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
54 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
55 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
56 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
57 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
58 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
59 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
60 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
61 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
62 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
63 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
64 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
65 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
66 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
67 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
68 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
69 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
70 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
71 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
72 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
73 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
74 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
75 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
76 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
77 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
78 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
79 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
80 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
81 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
82 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
83 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
85 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
86 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
88 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
89 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
91 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
92 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
93 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
95 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
120 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
121 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
122 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
123 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
124 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
125 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
126 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
127 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
128 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
129 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
130 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
131 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
132 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
133 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
134 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
135 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
136 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
137 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
138 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
139 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
140 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
141 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
142 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
143 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
144 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
145 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
146 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
147 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
148 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
149 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
150 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
151 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
152 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
153 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
154 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
155 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
156 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
157 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
158 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
159 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
160 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
162 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
163 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
164 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
165 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
166 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
167 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
168 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
169 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
170 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
171 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
172 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
173 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
174 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
175 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
176 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
177 8054357960 Idiomarina rhizosphaerae M1R2S28 Isolate Rhizosphere
178 8057132660 Paracoccus rhizosphaerae LMG 21293 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 81.94
Metatranscriptomes 0
Isolates 18.06

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 26.87
Nodule 0.88
Rhizoplane 2.2
Rhizosphere 49.78
Stem 0
Stem Tuber 0.44
Unclassified 19.82

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1000589 3300001915 Bacteria 11003
2 JGI24740J21852_10004165 3300001979 Bacteria 6245
3 JGI24737J22298_10018734 3300001990 Bacteria 2219
4 JGI25406J46586_10015692 3300003203 Bacteria 3186
5 JGI25165J46597_1000021 3300003214 Bacteria 359288
6 rootH2_10017235 3300003320 Bacteria 1246
7 Ga0055542_1000102 3300003762 Bacteria 115614
8 Ga0055529_1000136 3300003763 Bacteria 104102
9 Ga0055537_1004786 3300003773 Bacteria 3787
10 Ga0055524_1007716 3300003775 Bacteria 4542
11 Ga0055536_1000475 3300003781 Bacteria 27982
12 Ga0055536_1000563 3300003781 Bacteria 25332
13 Ga0055536_1003292 3300003781 Bacteria 8740
14 Ga0055528_1006127 3300003790 Bacteria 5494
15 Ga0055530_10002091 3300003791 Bacteria 13351
16 Ga0055530_10011526 3300003791 Bacteria 3166
17 Ga0055531_10000555 3300003794 Bacteria 32865
18 Ga0055531_10001366 3300003794 Bacteria 18116
19 Ga0065714_10076116 3300005288 Bacteria 2816
20 Ga0070658_10002772 3300005327 Bacteria 14570
21 Ga0068869_100101269 3300005334 Bacteria 2179
22 Ga0068869_100115922 3300005334 Bacteria 2043
23 Ga0070660_100031939 3300005339 Bacteria 3959
24 Ga0070661_100006364 3300005344 Bacteria 8145
25 Ga0070659_100027446 3300005366 Bacteria 4387
26 Ga0070663_100016958 3300005455 Bacteria 4741
27 Ga0070684_100108768 3300005535 Bacteria 2484
28 Ga0070686_100163053 3300005544 Bacteria 1571
29 Ga0070665_100135804 3300005548 Bacteria 2462
30 Ga0068857_100069966 3300005577 Bacteria 3125
31 Ga0068854_100069445 3300005578 Bacteria 2572
32 Ga0068864_100261432 3300005618 Bacteria 1610
33 Ga0068851_10017947 3300005834 Bacteria 3406
34 Ga0068863_100117069 3300005841 Bacteria 2539
35 Ga0068858_100018202 3300005842 Bacteria 6578
36 Ga0068860_100000073 3300005843 Bacteria 173235
37 Ga0081539_10002305 3300005985 Bacteria 27551
38 Ga0075369_10028450 3300006186 Bacteria 2342
39 Ga0105245_10013291 3300009098 Bacteria 7172
40 Ga0105241_10005328 3300009174 Bacteria 9503
41 Ga0105237_10130285 3300009545 Bacteria 2510
42 Ga0105238_10072991 3300009551 Bacteria 3426
43 Ga0157373_10094245 3300013100 Bacteria 2108
44 Ga0157371_10000066 3300013102 Bacteria 168406
45 Ga0157369_10276273 3300013105 Bacteria 1750
46 Ga0157378_10260839 3300013297 Bacteria 1663
47 Ga0157372_10198401 3300013307 Bacteria 2324
48 Ga0163161_10063477 3300017792 Bacteria 2692
49 Ga0209148_1000159 3300025254 Bacteria 139560
50 Ga0209233_1000065 3300025261 Bacteria 387195
51 Ga0209565_1000298 3300025263 Bacteria 47155
52 Ga0209565_1000647 3300025263 Bacteria 22498
53 Ga0209455_1000045 3300025272 Bacteria 383329
54 Ga0209673_1001605 3300025273 Bacteria 19804
55 Ga0209673_1017244 3300025273 Bacteria 2667
56 Ga0209675_1010924 3300025291 Bacteria 3056
57 Ga0209676_1000067 3300025292 Bacteria 315576
58 Ga0209676_1000134 3300025292 Bacteria 183222
59 Ga0209676_1000928 3300025292 Bacteria 36206
60 Ga0209025_1000052 3300025294 Bacteria 324648
61 Ga0209564_1006748 3300025295 Bacteria 6090
62 Ga0209564_1007375 3300025295 Bacteria 5693
63 Ga0209758_1001348 3300025297 Bacteria 29636
64 Ga0209758_1015493 3300025297 Bacteria 3940
65 Ga0209050_1000348 3300025298 Bacteria 90399
66 Ga0209050_1001544 3300025298 Bacteria 24132
67 Ga0209050_1005259 3300025298 Bacteria 8245
68 Ga0209050_1010795 3300025298 Bacteria 4444
69 Ga0209256_1002927 3300025299 Bacteria 12826
70 Ga0209256_1009582 3300025299 Bacteria 4220
71 Ga0209256_1013411 3300025299 Bacteria 3042
72 Ga0209051_1008192 3300025303 Bacteria 5570
73 Ga0209257_1000184 3300025304 Bacteria 156438
74 Ga0209257_1000424 3300025304 Bacteria 81333
75 Ga0209257_1024939 3300025304 Bacteria 2056
76 Ga0207656_10001774 3300025321 Bacteria 7181
77 Ga0207647_10124474 3300025904 Bacteria 1518
78 Ga0207705_10000523 3300025909 Bacteria 32624
79 Ga0207695_10046091 3300025913 Bacteria 4623
80 Ga0207671_10006855 3300025914 Bacteria 10051
81 Ga0207657_10003196 3300025919 Bacteria 17532
82 Ga0207649_10000069 3300025920 Bacteria 91425
83 Ga0207694_10007081 3300025924 Bacteria 8518
84 Ga0207687_10050221 3300025927 Bacteria 2902
85 Ga0207690_10001725 3300025932 Bacteria 13437
86 Ga0207667_10000001 3300025949 Bacteria 1178522
87 Ga0207667_10004096 3300025949 Bacteria 17909
88 Ga0207640_10001746 3300025981 Bacteria 11663
89 Ga0207658_10000025 3300025986 Bacteria 182470
90 Ga0207703_10001458 3300026035 Bacteria 21570
91 Ga0207639_10000379 3300026041 Bacteria 30706
92 Ga0207639_10004775 3300026041 Bacteria 9136
93 Ga0207678_10001262 3300026067 Bacteria 23373
94 Ga0207702_10003423 3300026078 Bacteria 14506
95 Ga0207641_10009918 3300026088 Bacteria 7841
96 Ga0207648_10325449 3300026089 Bacteria 1382
97 Ga0207674_10005286 3300026116 Bacteria 15360
98 Ga0207698_10000220 3300026142 Bacteria 35458
99 Ga0268264_10000120 3300028381 Bacteria 191138
100 Ga0307515_10076908 3300028794 Bacteria 4416
101 Ga0265331_10085664 3300031250 Bacteria 1460
102 Ga0307508_10015601 3300031616 Bacteria 6921
103 Ga0307412_10029077 3300031911 Bacteria 3465
104 Ga0307510_10048395 3300033180 Bacteria 4537
105 Ga0395900_0106150 3300037418 Bacteria 2885
106 Ga0395901_0156805 3300038443 Bacteria 2391
107 Ga0400483_035235 3300039062 Bacteria 2886
108 Ga0400483_165117 3300039062 Bacteria 5968
109 Ga0400483_233359 3300039062 Bacteria 2676
110 Ga0400483_262228 3300039062 Bacteria 3035
111 Ga0451853_0669726 3300041512 Bacteria 1169
112 Ga0451576_0001111 3300045051 Bacteria 49021
113 Ga0495627_000711 3300046453 Bacteria 25361
114 Ga0495638_0000432 3300046460 Bacteria 50709
115 Ga0495638_0001566 3300046460 Bacteria 20510
116 Ga0495638_0003539 3300046460 Bacteria 12241
117 Ga0495638_0021037 3300046460 Bacteria 4303
118 Ga0495585_0184948 3300046492 Bacteria 1069
119 Ga0495585_0207061 3300046492 Bacteria 996
120 Ga0495596_0016617 3300046500 Bacteria 3054
121 Ga0495607_0032537 3300046501 Bacteria 3182
122 Ga0495606_0000379 3300046507 Bacteria 75426
123 Ga0495606_0016108 3300046507 Bacteria 5720
124 Ga0495616_0000379 3300046513 Bacteria 34712
125 Ga0495631_0019510 3300046518 Bacteria 3178
126 Ga0495632_0021467 3300046519 Bacteria 3478
127 Ga0495643_0001844 3300046522 Bacteria 18000
128 Ga0495648_0035012 3300046524 Bacteria 3260
129 Ga0495609_0019610 3300046538 Bacteria 3127
130 Ga0495597_0044653 3300046542 Bacteria 1970
131 Ga0495633_0000758 3300046558 Bacteria 29025
132 Ga0495633_0001553 3300046558 Bacteria 17605
133 Ga0495668_0000548 3300046616 Bacteria 46481
134 Ga0495668_0001033 3300046616 Bacteria 29504
135 Ga0495668_0004639 3300046616 Bacteria 9652
136 Ga0495668_0012872 3300046616 Bacteria 4953
137 Ga0495625_0001064 3300046660 Bacteria 35917
138 Ga0495625_0002008 3300046660 Bacteria 22948
139 Ga0495625_0002165 3300046660 Bacteria 21819
140 Ga0495625_0025036 3300046660 Bacteria 4531
141 Ga0495625_0072317 3300046660 Bacteria 2419
142 Ga0495670_0019719 3300046691 Bacteria 3323
143 Ga0495671_0149388 3300046692 Bacteria 1138
144 Ga0495673_0012686 3300047469 Bacteria 4453
145 Ga0495681_0039256 3300047470 Bacteria 2314
146 Ga0495686_0033466 3300047472 Bacteria 3318
147 Ga0496106_0058985 3300048909 Bacteria 2906
148 Ga0496107_0000062 3300048910 Bacteria 53036
149 Ga0496115_0261513 3300048918 Bacteria 1423
150 Ga0496116_0023794 3300048919 Bacteria 4552
151 Ga0496117_0004557 3300048920 Bacteria 15179
152 Ga0496121_0000552 3300048924 Bacteria 70734
153 Ga0496121_0033027 3300048924 Bacteria 4692
154 Ga0496122_0000024 3300048925 Bacteria 372400
155 Ga0496122_0005311 3300048925 Bacteria 15411
156 Ga0496123_0000086 3300048926 Bacteria 183266
157 Ga0496123_0005797 3300048926 Bacteria 12264
158 Ga0496125_0000833 3300048928 Bacteria 49770
159 Ga0496125_0001673 3300048928 Bacteria 31116
160 Ga0496125_0010222 3300048928 Bacteria 9513
161 Ga0496126_0000434 3300048929 Bacteria 83949
162 Ga0496126_0005874 3300048929 Bacteria 13845
163 Ga0496126_0057052 3300048929 Bacteria 3528
164 Ga0501034_0000161 3300049571 Bacteria 126011
165 Ga0501034_0395207 3300049571 Bacteria 1306
166 Ga0501067_0102739 3300049583 Bacteria 1588
167 nmdc:mga0sz30_19023_c2 3300050516 Bacteria 1724
168 Ga0500644_0031015 3300053088 Bacteria 1696
169 Ga0500647_0047097 3300053091 Bacteria 2072
170 Ga0500641_0003043 3300053096 Bacteria 5942
171 Ga0500641_0003147 3300053096 Bacteria 5845
172 Ga0500595_001175 3300053119 Bacteria 14475
173 Ga0500618_007560 3300053125 Bacteria 3089
174 Ga0500658_0024864 3300053134 Bacteria 2298
175 Ga0500559_0004751 3300053136 Bacteria 6373
176 Ga0500559_0009197 3300053136 Bacteria 4289
177 Ga0500559_0102258 3300053136 Bacteria 1321
178 Ga0500573_0000045 3300053140 Bacteria 98878
179 Ga0500573_0000510 3300053140 Bacteria 16815
180 Ga0500577_0001590 3300053142 Bacteria 5816
181 Ga0500604_0069891 3300053151 Bacteria 1118
182 Ga0500616_0006061 3300053153 Bacteria 8024
183 Ga0500616_0048097 3300053153 Bacteria 2262
184 Ga0500622_0044774 3300053156 Bacteria 2293
185 Ga0500611_002809 3300053727 Bacteria 2143
186 Ga0500609_000211 3300053731 Bacteria 8307

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300003773 Ga0055537_1004786 Ga0055537_10047861 242
2 3300025263 Ga0209565_1000298 Ga0209565_100029818 242
3 3300025273 Ga0209673_1017244 Ga0209673_10172442 242
4 3300025295 Ga0209564_1006748 Ga0209564_10067482 242
5 3300025295 Ga0209564_1007375 Ga0209564_10073756 242
6 3300025298 Ga0209050_1005259 Ga0209050_10052592 242
7 3300039062 Ga0400483_233359 Ga0400483_233359_25_1008 256
8 3300049583 Ga0501067_0102739 Ga0501067_0102739_250_1176 263
9 3300026089 Ga0207648_10325449 Ga0207648_103254492 264
10 3300039062 Ga0400483_035235 Ga0400483_035235_457_1365 265
11 3300039062 Ga0400483_165117 Ga0400483_165117_2148_3056 265
12 iso_pu_bacteria 8057132660 8057132810 265
13 3300048929 Ga0496126_0057052 Ga0496126_0057052_57_986 267
14 3300046492 Ga0495585_0207061 Ga0495585_0207061_12_890 268
15 3300053134 Ga0500658_0024864 Ga0500658_0024864_364_1347 268
16 3300025294 Ga0209025_1000052 Ga0209025_1000052197 269
17 3300048920 Ga0496117_0004557 Ga0496117_0004557_9187_10125 269
18 3300048925 Ga0496122_0000024 Ga0496122_0000024_163948_164886 269
19 3300048926 Ga0496123_0000086 Ga0496123_0000086_87547_88485 269
20 3300048928 Ga0496125_0000833 Ga0496125_0000833_4423_5370 269
21 3300048929 Ga0496126_0000434 Ga0496126_0000434_6247_7185 269
22 iso_pu_bacteria 2713897090 2715500573 269
23 iso_pu_bacteria 2899259804 2899263031 269
24 3300046524 Ga0495648_0035012 Ga0495648_0035012_1610_2521 270
25 3300048929 Ga0496126_0005874 Ga0496126_0005874_5816_6754 270
26 3300031250 Ga0265331_10085664 Ga0265331_100856643 271
27 3300049571 Ga0501034_0000161 Ga0501034_0000161_76211_77188 272
28 iso_pu_bacteria 2855020534 2855021997 273
29 iso_pu_bacteria 2840878972 2840881528 274
30 iso_pu_bacteria 2898795034 2898795406 274
31 3300046460 Ga0495638_0001566 Ga0495638_0001566_6329_7270 275
32 3300053140 Ga0500573_0000510 Ga0500573_0000510_7718_8713 275
33 3300037418 Ga0395900_0106150 Ga0395900_0106150_1844_2770 276
34 3300039062 Ga0400483_262228 Ga0400483_262228_37_942 276
35 3300003203 JGI25406J46586_10015692 JGI25406J46586_100156922 277
36 3300005985 Ga0081539_10002305 Ga0081539_100023057 277
37 3300045051 Ga0451576_0001111 Ga0451576_0001111_13564_14472 277
38 3300049571 Ga0501034_0395207 Ga0501034_0395207_260_1207 277
39 3300053136 Ga0500559_0004751 Ga0500559_0004751_4581_5645 277
40 iso_pu_bacteria 2643221550 2643774397 277
41 iso_pu_bacteria 2834578030 2834579856 277
42 3300005544 Ga0070686_100163053 Ga0070686_1001630531 278
43 3300053088 Ga0500644_0031015 Ga0500644_0031015_430_1437 278
44 iso_pu_bacteria 2599185352 2600194136 278
45 iso_pu_bacteria 2643221618 2644108432 278
46 iso_pu_bacteria 2643221688 2644496414 278
47 iso_pu_bacteria 2657244999 2657684459 278
48 iso_pu_bacteria 2791355091 2792624321 278
49 iso_pu_bacteria 2802429268 2804753362 278
50 iso_pu_bacteria 2891373044 2891377477 278
51 iso_pu_bacteria 2919679072 2919679113 278
52 iso_pu_bacteria 2989349275 2989354598 278
53 iso_pu_bacteria 3000017691 3000019952 278
54 iso_pu_bacteria 3000405567 3000408224 278
55 iso_pu_bacteria 3003930520 3003930554 278
56 iso_pu_bacteria 8054357960 8054358864 279
57 3300013105 Ga0157369_10276273 Ga0157369_102762732 281
58 3300046558 Ga0495633_0001553 Ga0495633_0001553_5357_6313 281
59 3300048925 Ga0496122_0005311 Ga0496122_0005311_13614_14570 281
60 3300048926 Ga0496123_0005797 Ga0496123_0005797_6152_7108 281
61 iso_pu_bacteria 2928972540 2928975023 281
62 iso_pu_bacteria 2977240413 2977241990 281
63 3300017792 Ga0163161_10063477 Ga0163161_100634772 282
64 3300048928 Ga0496125_0001673 Ga0496125_0001673_26643_27593 282
65 3300048919 Ga0496116_0023794 Ga0496116_0023794_3488_4441 283
66 3300003781 Ga0055536_1003292 Ga0055536_10032928 284
67 3300005618 Ga0068864_100261432 Ga0068864_1002614322 284
68 3300005842 Ga0068858_100018202 Ga0068858_1000182025 284
69 3300009098 Ga0105245_10013291 Ga0105245_100132913 284
70 3300013297 Ga0157378_10260839 Ga0157378_102608392 284
71 3300025292 Ga0209676_1000928 Ga0209676_100092816 284
72 3300025304 Ga0209257_1000184 Ga0209257_1000184108 284
73 3300025927 Ga0207687_10050221 Ga0207687_100502212 284
74 3300026035 Ga0207703_10001458 Ga0207703_1000145812 284
75 3300031911 Ga0307412_10029077 Ga0307412_100290772 284
76 iso_pu_bacteria 2643221552 2643783349 284
77 iso_pu_bacteria 2643221584 2643931831 284
78 3300003781 Ga0055536_1000475 Ga0055536_100047514 285
79 3300003781 Ga0055536_1000563 Ga0055536_100056315 285
80 3300003791 Ga0055530_10002091 Ga0055530_1000209113 285
81 3300003791 Ga0055530_10011526 Ga0055530_100115263 285
82 3300003794 Ga0055531_10000555 Ga0055531_1000055513 285
83 3300003794 Ga0055531_10001366 Ga0055531_100013663 285
84 3300005334 Ga0068869_100115922 Ga0068869_1001159222 285
85 3300025292 Ga0209676_1000067 Ga0209676_100006792 285
86 3300025292 Ga0209676_1000134 Ga0209676_1000134100 285
87 3300025298 Ga0209050_1000348 Ga0209050_100034869 285
88 3300025298 Ga0209050_1001544 Ga0209050_10015444 285
89 3300025303 Ga0209051_1008192 Ga0209051_10081922 285
90 3300025304 Ga0209257_1000424 Ga0209257_100042461 285
91 3300025304 Ga0209257_1024939 Ga0209257_10249392 285
92 3300028794 Ga0307515_10076908 Ga0307515_100769085 285
93 3300046616 Ga0495668_0001033 Ga0495668_0001033_21152_22102 285
94 3300046616 Ga0495668_0012872 Ga0495668_0012872_572_1525 285
95 3300048928 Ga0496125_0010222 Ga0496125_0010222_6417_7367 285
96 3300053119 Ga0500595_001175 Ga0500595_001175_2177_3145 285
97 iso_pu_bacteria 2599185354 2600204151 285
98 3300003320 rootH2_10017235 rootH2_100172352 286
99 3300003790 Ga0055528_1006127 Ga0055528_10061271 286
100 3300005288 Ga0065714_10076116 Ga0065714_100761162 286
101 3300025263 Ga0209565_1000647 Ga0209565_100064712 286
102 3300025273 Ga0209673_1001605 Ga0209673_100160512 286
103 3300025291 Ga0209675_1010924 Ga0209675_10109244 286
104 3300025297 Ga0209758_1001348 Ga0209758_100134812 286
105 3300025297 Ga0209758_1015493 Ga0209758_10154934 286
106 3300025298 Ga0209050_1010795 Ga0209050_10107955 286
107 3300025299 Ga0209256_1009582 Ga0209256_10095824 286
108 3300046501 Ga0495607_0032537 Ga0495607_0032537_2211_3149 286
109 3300046513 Ga0495616_0000379 Ga0495616_0000379_8663_9601 286
110 3300046616 Ga0495668_0004639 Ga0495668_0004639_6798_7736 286
111 3300046660 Ga0495625_0002165 Ga0495625_0002165_8395_9333 286
112 3300046660 Ga0495625_0072317 Ga0495625_0072317_720_1673 286
113 3300047469 Ga0495673_0012686 Ga0495673_0012686_2305_3243 286
114 3300048909 Ga0496106_0058985 Ga0496106_0058985_1888_2826 286
115 3300048910 Ga0496107_0000062 Ga0496107_0000062_34710_35648 286
116 3300048924 Ga0496121_0000552 Ga0496121_0000552_53376_54314 286
117 3300048924 Ga0496121_0033027 Ga0496121_0033027_514_1464 286
118 3300053091 Ga0500647_0047097 Ga0500647_0047097_160_1113 286
119 3300053125 Ga0500618_007560 Ga0500618_007560_34_987 286
120 3300053140 Ga0500573_0000045 Ga0500573_0000045_5741_6733 286
121 3300053151 Ga0500604_0069891 Ga0500604_0069891_34_987 286
122 iso_pu_bacteria 2643221545 2643749790 286
123 iso_pu_bacteria 2643221663 2644353567 286
124 iso_pu_bacteria 2643221691 2644508746 286
125 iso_pu_bacteria 2751185897 2753765475 286
126 3300005548 Ga0070665_100135804 Ga0070665_1001358043 287
127 3300046453 Ga0495627_000711 Ga0495627_000711_21744_22685 287
128 3300046460 Ga0495638_0003539 Ga0495638_0003539_6531_7472 287
129 3300046460 Ga0495638_0021037 Ga0495638_0021037_2098_3039 287
130 3300046519 Ga0495632_0021467 Ga0495632_0021467_93_1034 287
131 3300046538 Ga0495609_0019610 Ga0495609_0019610_76_1017 287
132 3300047472 Ga0495686_0033466 Ga0495686_0033466_1508_2467 287
133 3300053136 Ga0500559_0009197 Ga0500559_0009197_2162_3103 287
134 3300053727 Ga0500611_002809 Ga0500611_002809_235_1176 287
135 3300053731 Ga0500609_000211 Ga0500609_000211_3033_3974 287
136 iso_pu_bacteria 2648501241 2649119395 287
137 iso_pu_bacteria 2651869818 2652974740 287
138 iso_pu_bacteria 2857504554 2857504995 287
139 iso_pu_bacteria 2919497567 2919500246 287
140 3300003214 JGI25165J46597_1000021 JGI25165J46597_100002144 288
141 3300003775 Ga0055524_1007716 Ga0055524_10077161 288
142 3300025261 Ga0209233_1000065 Ga0209233_100006544 288
143 3300025299 Ga0209256_1002927 Ga0209256_10029274 288
144 3300046460 Ga0495638_0000432 Ga0495638_0000432_44744_45688 288
145 3300046660 Ga0495625_0002008 Ga0495625_0002008_15818_16768 288
146 3300048918 Ga0496115_0261513 Ga0496115_0261513_195_1154 288
147 3300053156 Ga0500622_0044774 Ga0500622_0044774_337_1281 288
148 iso_pu_bacteria 2896253425 2896255672 288
149 3300005334 Ga0068869_100101269 Ga0068869_1001012692 289
150 3300005841 Ga0068863_100117069 Ga0068863_1001170692 289
151 3300005843 Ga0068860_100000073 Ga0068860_100000073122 289
152 3300006186 Ga0075369_10028450 Ga0075369_100284502 289
153 3300025299 Ga0209256_1013411 Ga0209256_10134113 289
154 3300025986 Ga0207658_10000025 Ga0207658_1000002538 289
155 3300026088 Ga0207641_10009918 Ga0207641_100099184 289
156 3300028381 Ga0268264_10000120 Ga0268264_10000120137 289
157 3300031616 Ga0307508_10015601 Ga0307508_100156014 289
158 3300046660 Ga0495625_0001064 Ga0495625_0001064_13058_14005 289
159 3300050516 nmdc:mga0sz30_19023_c2 nmdc:mga0sz30_19023_c2_283_1221 289
160 3300053096 Ga0500641_0003043 Ga0500641_0003043_3137_4078 289
161 3300053096 Ga0500641_0003147 Ga0500641_0003147_2233_3198 289
162 3300053136 Ga0500559_0102258 Ga0500559_0102258_310_1272 289
163 3300053153 Ga0500616_0006061 Ga0500616_0006061_5560_6501 289
164 3300053153 Ga0500616_0048097 Ga0500616_0048097_55_1026 289
165 iso_pu_bacteria 2791355048 2792463146 289
166 iso_pu_bacteria 2843744320 2843744324 289
167 iso_pu_bacteria 2849560528 2849562554 289
168 iso_pu_bacteria 2849573788 2849575155 289
169 iso_pu_bacteria 2851153111 2851155803 289
170 iso_pu_bacteria 2898329390 2898332352 289
171 3300038443 Ga0395901_0156805 Ga0395901_0156805_438_1391 290
172 3300046507 Ga0495606_0016108 Ga0495606_0016108_1341_2291 290
173 3300053142 Ga0500577_0001590 Ga0500577_0001590_2259_3224 290
174 3300001915 JGI24741J21665_1000589 JGI24741J21665_10005894 291
175 3300001979 JGI24740J21852_10004165 JGI24740J21852_100041657 291
176 3300001990 JGI24737J22298_10018734 JGI24737J22298_100187342 291
177 3300003762 Ga0055542_1000102 Ga0055542_100010274 291
178 3300003763 Ga0055529_1000136 Ga0055529_100013662 291
179 3300005327 Ga0070658_10002772 Ga0070658_100027724 291
180 3300005339 Ga0070660_100031939 Ga0070660_1000319391 291
181 3300005344 Ga0070661_100006364 Ga0070661_1000063647 291
182 3300005366 Ga0070659_100027446 Ga0070659_1000274463 291
183 3300005455 Ga0070663_100016958 Ga0070663_1000169583 291
184 3300005535 Ga0070684_100108768 Ga0070684_1001087682 291
185 3300005577 Ga0068857_100069966 Ga0068857_1000699662 291
186 3300005578 Ga0068854_100069445 Ga0068854_1000694452 291
187 3300005834 Ga0068851_10017947 Ga0068851_100179472 291
188 3300009174 Ga0105241_10005328 Ga0105241_100053289 291
189 3300009545 Ga0105237_10130285 Ga0105237_101302853 291
190 3300009551 Ga0105238_10072991 Ga0105238_100729914 291
191 3300013100 Ga0157373_10094245 Ga0157373_100942452 291
192 3300013102 Ga0157371_10000066 Ga0157371_1000006662 291
193 3300013307 Ga0157372_10198401 Ga0157372_101984012 291
194 3300025254 Ga0209148_1000159 Ga0209148_100015996 291
195 3300025272 Ga0209455_1000045 Ga0209455_100004547 291
196 3300025321 Ga0207656_10001774 Ga0207656_100017743 291
197 3300025904 Ga0207647_10124474 Ga0207647_101244742 291
198 3300025909 Ga0207705_10000523 Ga0207705_1000052310 291
199 3300025913 Ga0207695_10046091 Ga0207695_100460913 291
200 3300025914 Ga0207671_10006855 Ga0207671_100068558 291
201 3300025919 Ga0207657_10003196 Ga0207657_100031965 291
202 3300025920 Ga0207649_10000069 Ga0207649_1000006943 291
203 3300025924 Ga0207694_10007081 Ga0207694_100070815 291
204 3300025932 Ga0207690_10001725 Ga0207690_100017255 291
205 3300025949 Ga0207667_10000001 Ga0207667_1000000195 291
206 3300025949 Ga0207667_10004096 Ga0207667_1000409615 291
207 3300025981 Ga0207640_10001746 Ga0207640_1000174611 291
208 3300026041 Ga0207639_10000379 Ga0207639_1000037928 291
209 3300026041 Ga0207639_10004775 Ga0207639_100047758 291
210 3300026067 Ga0207678_10001262 Ga0207678_1000126215 291
211 3300026078 Ga0207702_10003423 Ga0207702_1000342310 291
212 3300026116 Ga0207674_10005286 Ga0207674_100052869 291
213 3300026142 Ga0207698_10000220 Ga0207698_1000022010 291
214 3300033180 Ga0307510_10048395 Ga0307510_100483953 291
215 3300041512 Ga0451853_0669726 Ga0451853_0669726_13_951 291
216 3300046492 Ga0495585_0184948 Ga0495585_0184948_72_1010 291
217 3300046500 Ga0495596_0016617 Ga0495596_0016617_1656_2594 291
218 3300046507 Ga0495606_0000379 Ga0495606_0000379_36512_37450 291
219 3300046518 Ga0495631_0019510 Ga0495631_0019510_1274_2212 291
220 3300046522 Ga0495643_0001844 Ga0495643_0001844_9032_9970 291
221 3300046542 Ga0495597_0044653 Ga0495597_0044653_145_1083 291
222 3300046558 Ga0495633_0000758 Ga0495633_0000758_11086_12024 291
223 3300046616 Ga0495668_0000548 Ga0495668_0000548_23473_24411 291
224 3300046660 Ga0495625_0025036 Ga0495625_0025036_1731_2669 291
225 3300046691 Ga0495670_0019719 Ga0495670_0019719_2163_3101 291
226 3300046692 Ga0495671_0149388 Ga0495671_0149388_33_971 291
227 3300047470 Ga0495681_0039256 Ga0495681_0039256_727_1665 291

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17773

UPF0176_N

UPF0176 acylphosphatase like domain

39

130

0.99

PF00581

Rhodanese

Rhodanese-like domain

149

250

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
4f67-assembly1.cif.gz_A three dimensional structure of the double mutant of upf0176 protein lpg2838 from legionella pneumophila at the resolution 1.8a, northeast structural genomics consortium (nesg) target lgr82 0.872 3 228
3ntd-assembly1.cif.gz_A structure of the shewanella loihica pv-4 nadh-dependent persulfide reductase c531s mutant 0.8645 87 186
3nt6-assembly1.cif.gz_B structure of the shewanella loihica pv-4 nadh-dependent persulfide reductase c43s/c531s double mutant 0.8587 87 186
3icr-assembly1.cif.gz_A crystal structure of oxidized bacillus anthracis coadr-rhd 0.8488 83 186
1yt8-assembly1.cif.gz_A crystal structure of thiosulfate sulfurtransferase from pseudomonas aeruginosa 0.8398 87 199
ID Description Score Start End Superfamily
af_Q0DJ66_209_392_3.40.250.10 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.9454 76 230 3.40.250.10
af_Q2FUS7_100_247_3.40.250.10 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.9314 77 213 3.40.250.10
4f67A02 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.9243 76 228 3.40.250.10
af_Q94AC1_131_286_3.40.250.10 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.8884 83 218 3.40.250.10
af_Q2FY36_20_124_3.40.250.10 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.8642 82 185 3.40.250.10
ID Description Score Start End GO Terms
AF-A0A3C1T0F9-F1-model_v4 Rhodanese domain-containing protein 0.9808 104 234
AF-A0A3D3G3N6-F1-model_v4 Rhodanese-like domain-containing protein 0.9759 108 274
AF-A0A0F3MW96-F1-model_v4 Rhodanese-like domain protein 0.9758 86 217
AF-T2JUL6-F1-model_v4 Rhodanese domain-containing protein 0.9697 176 272
AF-A0A258QFN9-F1-model_v4 deleted 0.9647 80 285

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