F338661

General Info

Members Datasets Scaffolds Average Seq Length
226 135 430 542

Family's Representative Sequence

Representative Sequence 3300005548|Ga0070665_100013526|Ga0070665_1000135262
Length 578
Sequence VYKKRGVFEEMIVTKVMSLCFVGALIALPGCSQKAATVSAAAPASTAPKIGIHPFGTGEPDFKPDYSKLPADLQKVFTYIDTNIDTHAENIQKWIKQPSISNSGEGIPESAEMVKGFYEKLGCQYARVYDTGLTEYGSQGNPVVFAKCDEGAPKTLAIYWQYDTMPVTQPDVWIAPPFEGKIVDGPTANVDGASRVIIGRGATNSKGPEMAVLNAITSMKAVMGKLPVNLIFIAEGDEERMDIGLRKFIGEHSDLFAEADALFVGGPSEGCVYVELTTSGKSWGRGPVQSDVHGVMKRTTDSPAWRHIQMLASLTSKDGNTPLIKGFFENMDPPTKAEVEQMKAQAARTDLATMARNAGVARFMSDDPFQVLKDGRFGVSFNLDGGWGGNMYAGGAGAILPNKFTTKHNFRYVPRMNGPDLVKKLRAQLDANGYKDVEVKLIGDVPWSRGSSPDTDIAHAHQKAGELMASIGLGGGRAGAPLLPTSARLTDPNALLSDTAADPAGGYWPAYLFADGETGQKIGSVSIPMGGAANEFYTIESVGKAGGLANAEKNAAAAIYQYAQLTTVPPKPKAAGGK

Samples

Sample ID Description Type Environment
1 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
43 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
44 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
57 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
83 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
86 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
87 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
88 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
89 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
90 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
91 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
92 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
93 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
94 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
95 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
96 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
97 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
98 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
99 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
100 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
101 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
102 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
103 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
104 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
105 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
106 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
107 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
108 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
109 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
110 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
111 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
112 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
113 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
114 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
115 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
116 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
117 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
118 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
119 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
120 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
121 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
122 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
123 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
124 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
125 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
126 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
127 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
128 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
129 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
130 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
131 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
132 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
133 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
134 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
135 3300053736 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.73
Nodule 0
Rhizoplane 1.77
Rhizosphere 84.07
Stem 0
Stem Tuber 0
Unclassified 1.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070665_100013526 3300005548 Bacteria 8209
2 rootH2_10149744 3300003320 Bacteria 1790
3 Ga0065715_10113972 3300005293 Bacteria 2468
4 Ga0065707_10088855 3300005295 Bacteria 4531
5 Ga0070658_10006203 3300005327 Bacteria 9692
6 Ga0070676_10000982 3300005328 Bacteria 14173
7 Ga0070690_100029630 3300005330 Unclassified 3397
8 Ga0068868_100094587 3300005338 Bacteria 2411
9 Ga0070660_100013305 3300005339 Bacteria 5897
10 Ga0070660_100044266 3300005339 Bacteria 3404
11 Ga0070669_100027887 3300005353 Bacteria 4065
12 Ga0070675_100001132 3300005354 Bacteria 19255
13 Ga0070671_100006002 3300005355 Bacteria 9681
14 Ga0070673_100138406 3300005364 Bacteria 2052
15 Ga0070667_100008097 3300005367 Bacteria 8717
16 Ga0070667_100130113 3300005367 Bacteria 2196
17 Ga0070714_100013549 3300005435 Bacteria 6535
18 Ga0070701_10012492 3300005438 Bacteria 3833
19 Ga0070705_100072311 3300005440 Bacteria 2089
20 Ga0070700_100018120 3300005441 Bacteria 4042
21 Ga0070694_100025652 3300005444 Bacteria 3813
22 Ga0070694_100063151 3300005444 Bacteria 2531
23 Ga0070678_100030003 3300005456 Bacteria 3731
24 Ga0070681_10071940 3300005458 Bacteria 3422
25 Ga0068867_100011256 3300005459 Bacteria 6308
26 Ga0070699_100004603 3300005518 Bacteria 12201
27 Ga0070699_100104053 3300005518 Bacteria 2490
28 Ga0070679_100040664 3300005530 Bacteria 4625
29 Ga0070679_100070838 3300005530 Bacteria 3478
30 Ga0070697_100080179 3300005536 Bacteria 2689
31 Ga0070686_100003186 3300005544 Bacteria 8984
32 Ga0070665_100002953 3300005548 Bacteria 18363
33 Ga0070665_100028597 3300005548 Bacteria 5614
34 Ga0070665_100061561 3300005548 Bacteria 3763
35 Ga0070704_100006891 3300005549 Bacteria 6729
36 Ga0068855_100002008 3300005563 Bacteria 25247
37 Ga0068855_100006730 3300005563 Bacteria 13945
38 Ga0068854_100013465 3300005578 Bacteria 5370
39 Ga0068854_100106004 3300005578 Bacteria 2114
40 Ga0070702_100026666 3300005615 Bacteria 3107
41 Ga0068864_100046057 3300005618 Bacteria 3742
42 Ga0068866_10029500 3300005718 Bacteria 2624
43 Ga0068863_100005299 3300005841 Bacteria 12730
44 Ga0068863_100062963 3300005841 Bacteria 3508
45 Ga0068858_100007431 3300005842 Bacteria 10598
46 Ga0068858_100007844 3300005842 Bacteria 10301
47 Ga0068858_100027936 3300005842 Bacteria 5243
48 Ga0068862_100010219 3300005844 Bacteria 7745
49 Ga0068862_100036182 3300005844 Bacteria 4184
50 Ga0081455_10027022 3300005937 Bacteria 5266
51 Ga0097621_100005578 3300006237 Bacteria 8871
52 Ga0068871_100067332 3300006358 Bacteria 2938
53 Ga0075428_100000005 3300006844 Bacteria 326130
54 Ga0075428_100111100 3300006844 Bacteria 2986
55 Ga0075434_100031734 3300006871 Bacteria 5209
56 Ga0075434_100112333 3300006871 Bacteria 2736
57 Ga0075429_100057508 3300006880 Bacteria 3386
58 Ga0068865_100000642 3300006881 Bacteria 19761
59 Ga0068865_100022054 3300006881 Bacteria 4147
60 Ga0075436_100024131 3300006914 Bacteria 4180
61 Ga0075435_100000072 3300007076 Bacteria 51797
62 Ga0075435_100001459 3300007076 Bacteria 15190
63 Ga0075435_100009377 3300007076 Bacteria 7082
64 Ga0075435_100134217 3300007076 Bacteria 2072
65 Ga0105240_10020941 3300009093 Bacteria 8706
66 Ga0105240_10027203 3300009093 Bacteria 7491
67 Ga0105240_10028707 3300009093 Bacteria 7258
68 Ga0111539_10000008 3300009094 Bacteria 382609
69 Ga0105245_10093794 3300009098 Bacteria 2766
70 Ga0105245_10136852 3300009098 Unclassified 2303
71 Ga0114129_10017214 3300009147 Bacteria 10295
72 Ga0114129_10033210 3300009147 Bacteria 7292
73 Ga0105241_10019561 3300009174 Bacteria 4994
74 Ga0105242_10002523 3300009176 Bacteria 14359
75 Ga0105242_10023275 3300009176 Bacteria 4883
76 Ga0105242_10025551 3300009176 Bacteria 4675
77 Ga0105248_10018700 3300009177 Bacteria 7660
78 Ga0105248_10050514 3300009177 Bacteria 4665
79 Ga0105248_10115375 3300009177 Bacteria 3029
80 Ga0105248_10216307 3300009177 Bacteria 2158
81 Ga0105238_10166986 3300009551 Bacteria 2177
82 Ga0157374_10038449 3300013296 Bacteria 4398
83 Ga0157374_10075471 3300013296 Bacteria 3185
84 Ga0157378_10155401 3300013297 Bacteria 2135
85 Ga0163162_10099600 3300013306 Bacteria 2997
86 Ga0157379_10010304 3300014968 Bacteria 8139
87 Ga0157379_10013287 3300014968 Bacteria 7211
88 Ga0209050_1024566 3300025298 Bacteria 2079
89 Ga0207647_10036871 3300025904 Bacteria 3104
90 Ga0207647_10041538 3300025904 Bacteria 2891
91 Ga0207645_10004932 3300025907 Bacteria 9784
92 Ga0207705_10083789 3300025909 Bacteria 2327
93 Ga0207707_10019226 3300025912 Bacteria 5962
94 Ga0207695_10060227 3300025913 Bacteria 3931
95 Ga0207695_10073519 3300025913 Bacteria 3483
96 Ga0207662_10011114 3300025918 Bacteria 4981
97 Ga0207657_10005651 3300025919 Bacteria 13051
98 Ga0207657_10005912 3300025919 Bacteria 12734
99 Ga0207646_10118678 3300025922 Bacteria 2376
100 Ga0207681_10017107 3300025923 Bacteria 4548
101 Ga0207694_10076979 3300025924 Bacteria 2613
102 Ga0207659_10004299 3300025926 Bacteria 8612
103 Ga0207644_10004557 3300025931 Bacteria 9007
104 Ga0207686_10003800 3300025934 Bacteria 8102
105 Ga0207686_10004588 3300025934 Bacteria 7405
106 Ga0207686_10039273 3300025934 Bacteria 2871
107 Ga0207709_10081542 3300025935 Bacteria 2086
108 Ga0207691_10078975 3300025940 Bacteria 2962
109 Ga0207711_10048634 3300025941 Bacteria 3628
110 Ga0207667_10084289 3300025949 Bacteria 3290
111 Ga0207640_10015970 3300025981 Bacteria 4357
112 Ga0207640_10017382 3300025981 Unclassified 4207
113 Ga0207658_10129131 3300025986 Bacteria 2028
114 Ga0207677_10032032 3300026023 Bacteria 3375
115 Ga0207703_10012877 3300026035 Bacteria 6522
116 Ga0207703_10029175 3300026035 Bacteria 4353
117 Ga0207703_10076797 3300026035 Bacteria 2771
118 Ga0207703_10079943 3300026035 Bacteria 2722
119 Ga0207641_10000800 3300026088 Bacteria 33612
120 Ga0207675_100011557 3300026118 Bacteria 8256
121 Ga0207675_100095800 3300026118 Bacteria 2793
122 Ga0207683_10204493 3300026121 Bacteria 1796
123 Ga0207428_10000019 3300027907 Bacteria 276945
124 Ga0207428_10048194 3300027907 Bacteria 3419
125 Ga0207428_10126366 3300027907 Bacteria 1958
126 Ga0268266_10001242 3300028379 Bacteria 31177
127 Ga0268266_10006146 3300028379 Bacteria 11050
128 Ga0268266_10011501 3300028379 Bacteria 7684
129 Ga0268265_10021302 3300028380 Bacteria 4538
130 Ga0307415_100079957 3300032126 Bacteria 2331
131 Ga0307510_10051158 3300033180 Bacteria 4373
132 Ga0307510_10120108 3300033180 Bacteria 2336
133 Ga0373950_0004369 3300034818 Bacteria 2069
134 Ga0373959_0004246 3300034820 Bacteria 2303
135 Ga0373938_0002151 3300034957 Bacteria 3166
136 Ga0373928_0000210 3300035084 Bacteria 11310
137 Ga0373928_0001968 3300035084 Bacteria 4003
138 Ga0373940_0000025 3300035088 Bacteria 16704
139 Ga0373940_0001030 3300035088 Bacteria 4795
140 Ga0373949_0000496 3300035090 Bacteria 13360
141 Ga0373949_0000979 3300035090 Bacteria 8841
142 Ga0373951_0000216 3300035091 Bacteria 20354
143 Ga0373951_0000295 3300035091 Bacteria 15879
144 Ga0373952_0003904 3300035092 Bacteria 2698
145 Ga0373932_0002084 3300035112 Bacteria 5207
146 Ga0373932_0003062 3300035112 Bacteria 4083
147 Ga0373939_0000154 3300035114 Bacteria 19358
148 Ga0373939_0006513 3300035114 Bacteria 2816
149 Ga0373941_0000917 3300035115 Bacteria 6070
150 Ga0373941_0003175 3300035115 Bacteria 3692
151 Ga0373960_0000085 3300035121 Bacteria 13957
152 Ga0373960_0000912 3300035121 Bacteria 6283
153 Ga0373955_0009938 3300035172 Bacteria 4479
154 Ga0373942_0000256 3300035207 Bacteria 14176
155 Ga0373961_0001524 3300035241 Bacteria 6728
156 Ga0373962_0000510 3300035242 Bacteria 8654
157 Ga0373962_0000844 3300035242 Bacteria 6994
158 Ga0373931_0008037 3300035691 Bacteria 4991
159 Ga0373931_0014168 3300035691 Bacteria 3893
160 Ga0451576_0007241 3300045051 Bacteria 13358
161 Ga0451576_0016633 3300045051 Bacteria 8113
162 Ga0451576_0134803 3300045051 Bacteria 2575
163 Ga0495650_0000029 3300046471 Bacteria 453466
164 Ga0495583_0007542 3300046506 Bacteria 6807
165 Ga0495628_0106602 3300046516 Bacteria 2158
166 Ga0495645_0002016 3300046543 Bacteria 13842
167 Ga0495625_0022199 3300046660 Bacteria 4870
168 Ga0495625_0030772 3300046660 Bacteria 4000
169 Ga0495658_0021907 3300046683 Bacteria 3374
170 Ga0495649_0044529 3300046694 Bacteria 2423
171 Ga0495649_0054328 3300046694 Bacteria 2166
172 Ga0495674_0190195 3300047319 Bacteria 1706
173 Ga0495672_0001297 3300047320 Bacteria 24941
174 Ga0495686_0000915 3300047472 Bacteria 37021
175 Ga0495686_0001220 3300047472 Bacteria 29446
176 Ga0495686_0001357 3300047472 Bacteria 27329
177 Ga0495686_0061374 3300047472 Bacteria 2334
178 Ga0495686_0067270 3300047472 Bacteria 2212
179 Ga0496112_0018363 3300048915 Bacteria 6583
180 Ga0496112_0136890 3300048915 Bacteria 2419
181 Ga0496112_0164840 3300048915 Bacteria 2182
182 Ga0496114_0079384 3300048917 Bacteria 2770
183 Ga0496122_0005631 3300048925 Bacteria 14804
184 Ga0496122_0007848 3300048925 Bacteria 11722
185 Ga0496123_0004859 3300048926 Bacteria 13837
186 Ga0496126_0000942 3300048929 Bacteria 50132
187 Ga0496126_0001407 3300048929 Bacteria 38059
188 Ga0495682_0004868 3300049460 Bacteria 5657
189 nmdc:mga05p37_20819_c1 3300050507 Bacteria 7938
190 nmdc:mga09592_59039_c1 3300050508 Bacteria 3243
191 nmdc:mga08y16_17_c1 3300050511 Bacteria 382598
192 nmdc:mga08y16_52300_c1 3300050511 Bacteria 4274
193 nmdc:mga08y16_86207_c1 3300050511 Bacteria 3273
194 nmdc:mga0n895_112745_c1 3300050512 Bacteria 2736
195 nmdc:mga0n895_163520_c1 3300050512 Bacteria 2257
196 nmdc:mga0rr50_11887_c1 3300050513 Bacteria 5595
197 nmdc:mga0rr50_25665_c1 3300050513 Bacteria 4100
198 nmdc:mga0rr50_60990_c1 3300050513 Bacteria 2840
199 nmdc:mga08x19_2569_c1 3300050514 Bacteria 11035
200 nmdc:mga08x19_30133_c1 3300050514 Bacteria 3407
201 nmdc:mga0a205_100760_c1 3300050515 Bacteria 2787
202 nmdc:mga0a205_13384_c1 3300050515 Bacteria 7637
203 Ga0500643_007384 3300053087 Bacteria 4442
204 Ga0500555_001718 3300053103 Bacteria 6579
205 Ga0500555_002730 3300053103 Bacteria 5075
206 Ga0500658_0000415 3300053134 Bacteria 18459
207 Ga0500559_0002815 3300053136 Bacteria 8791
208 Ga0500559_0008627 3300053136 Bacteria 4458
209 Ga0500568_0002830 3300053139 Bacteria 10013
210 Ga0500616_0000011 3300053153 Bacteria 732880
211 Ga0500616_0001085 3300053153 Bacteria 28371
212 Ga0500616_0002124 3300053153 Bacteria 17208
213 Ga0500616_0004451 3300053153 Bacteria 9983
214 Ga0500645_000085 3300053730 Bacteria 75142
215 Ga0500599_001031 3300053736 Bacteria 3138
216 Ga0070665_100013526
217 rootH2_10149744
218 Ga0065715_10113972
219 Ga0065707_10088855
220 Ga0070658_10006203
221 Ga0070676_10000982
222 Ga0070690_100029630
223 Ga0068868_100094587
224 Ga0070660_100013305
225 Ga0070660_100044266
226 Ga0070669_100027887
227 Ga0070675_100001132
228 Ga0070671_100006002
229 Ga0070673_100138406
230 Ga0070667_100008097
231 Ga0070667_100130113
232 Ga0070714_100013549
233 Ga0070701_10012492
234 Ga0070705_100072311
235 Ga0070700_100018120
236 Ga0070694_100025652
237 Ga0070694_100063151
238 Ga0070678_100030003
239 Ga0070681_10071940
240 Ga0068867_100011256
241 Ga0070699_100004603
242 Ga0070699_100104053
243 Ga0070679_100040664
244 Ga0070679_100070838
245 Ga0070697_100080179
246 Ga0070686_100003186
247 Ga0070665_100002953
248 Ga0070665_100028597
249 Ga0070665_100061561
250 Ga0070704_100006891
251 Ga0068855_100002008
252 Ga0068855_100006730
253 Ga0068854_100013465
254 Ga0068854_100106004
255 Ga0070702_100026666
256 Ga0068864_100046057
257 Ga0068866_10029500
258 Ga0068863_100005299
259 Ga0068863_100062963
260 Ga0068858_100007431
261 Ga0068858_100007844
262 Ga0068858_100027936
263 Ga0068862_100010219
264 Ga0068862_100036182
265 Ga0081455_10027022
266 Ga0097621_100005578
267 Ga0068871_100067332
268 Ga0075428_100000005
269 Ga0075428_100111100
270 Ga0075434_100031734
271 Ga0075434_100112333
272 Ga0075429_100057508
273 Ga0068865_100000642
274 Ga0068865_100022054
275 Ga0075436_100024131
276 Ga0075435_100000072
277 Ga0075435_100001459
278 Ga0075435_100009377
279 Ga0075435_100134217
280 Ga0105240_10020941
281 Ga0105240_10027203
282 Ga0105240_10028707
283 Ga0111539_10000008
284 Ga0105245_10093794
285 Ga0105245_10136852
286 Ga0114129_10017214
287 Ga0114129_10033210
288 Ga0105241_10019561
289 Ga0105242_10002523
290 Ga0105242_10023275
291 Ga0105242_10025551
292 Ga0105248_10018700
293 Ga0105248_10050514
294 Ga0105248_10115375
295 Ga0105248_10216307
296 Ga0105238_10166986
297 Ga0157374_10038449
298 Ga0157374_10075471
299 Ga0157378_10155401
300 Ga0163162_10099600
301 Ga0157379_10010304
302 Ga0157379_10013287
303 Ga0209050_1024566
304 Ga0207647_10036871
305 Ga0207647_10041538
306 Ga0207645_10004932
307 Ga0207705_10083789
308 Ga0207707_10019226
309 Ga0207695_10060227
310 Ga0207695_10073519
311 Ga0207662_10011114
312 Ga0207657_10005651
313 Ga0207657_10005912
314 Ga0207646_10118678
315 Ga0207681_10017107
316 Ga0207694_10076979
317 Ga0207659_10004299
318 Ga0207644_10004557
319 Ga0207686_10003800
320 Ga0207686_10004588
321 Ga0207686_10039273
322 Ga0207709_10081542
323 Ga0207691_10078975
324 Ga0207711_10048634
325 Ga0207667_10084289
326 Ga0207640_10015970
327 Ga0207640_10017382
328 Ga0207658_10129131
329 Ga0207677_10032032
330 Ga0207703_10012877
331 Ga0207703_10029175
332 Ga0207703_10076797
333 Ga0207703_10079943
334 Ga0207641_10000800
335 Ga0207675_100011557
336 Ga0207675_100095800
337 Ga0207683_10204493
338 Ga0207428_10000019
339 Ga0207428_10048194
340 Ga0207428_10126366
341 Ga0268266_10001242
342 Ga0268266_10006146
343 Ga0268266_10011501
344 Ga0268265_10021302
345 Ga0307415_100079957
346 Ga0307510_10051158
347 Ga0307510_10120108
348 Ga0373950_0004369
349 Ga0373959_0004246
350 Ga0373938_0002151
351 Ga0373928_0000210
352 Ga0373928_0001968
353 Ga0373940_0000025
354 Ga0373940_0001030
355 Ga0373949_0000496
356 Ga0373949_0000979
357 Ga0373951_0000216
358 Ga0373951_0000295
359 Ga0373952_0003904
360 Ga0373932_0002084
361 Ga0373932_0003062
362 Ga0373939_0000154
363 Ga0373939_0006513
364 Ga0373941_0000917
365 Ga0373941_0003175
366 Ga0373960_0000085
367 Ga0373960_0000912
368 Ga0373955_0009938
369 Ga0373942_0000256
370 Ga0373961_0001524
371 Ga0373962_0000510
372 Ga0373962_0000844
373 Ga0373931_0008037
374 Ga0373931_0014168
375 Ga0451576_0007241
376 Ga0451576_0016633
377 Ga0451576_0134803
378 Ga0495650_0000029
379 Ga0495583_0007542
380 Ga0495628_0106602
381 Ga0495645_0002016
382 Ga0495625_0022199
383 Ga0495625_0030772
384 Ga0495658_0021907
385 Ga0495649_0044529
386 Ga0495649_0054328
387 Ga0495674_0190195
388 Ga0495672_0001297
389 Ga0495686_0000915
390 Ga0495686_0001220
391 Ga0495686_0001357
392 Ga0495686_0061374
393 Ga0495686_0067270
394 Ga0496112_0018363
395 Ga0496112_0136890
396 Ga0496112_0164840
397 Ga0496114_0079384
398 Ga0496122_0005631
399 Ga0496122_0007848
400 Ga0496123_0004859
401 Ga0496126_0000942
402 Ga0496126_0001407
403 Ga0495682_0004868
404 nmdc:mga05p37_20819_c1
405 nmdc:mga09592_59039_c1
406 nmdc:mga08y16_17_c1
407 nmdc:mga08y16_52300_c1
408 nmdc:mga08y16_86207_c1
409 nmdc:mga0n895_112745_c1
410 nmdc:mga0n895_163520_c1
411 nmdc:mga0rr50_11887_c1
412 nmdc:mga0rr50_25665_c1
413 nmdc:mga0rr50_60990_c1
414 nmdc:mga08x19_2569_c1
415 nmdc:mga08x19_30133_c1
416 nmdc:mga0a205_100760_c1
417 nmdc:mga0a205_13384_c1
418 Ga0500643_007384
419 Ga0500555_001718
420 Ga0500555_002730
421 Ga0500658_0000415
422 Ga0500559_0002815
423 Ga0500559_0008627
424 Ga0500568_0002830
425 Ga0500616_0000011
426 Ga0500616_0001085
427 Ga0500616_0002124
428 Ga0500616_0004451
429 Ga0500645_000085
430 Ga0500599_001031

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01546

Peptidase_M20

Peptidase family M20/M25/M40

157

466

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
1q7l-assembly1.cif.gz_A zn-binding domain of the t347g mutant of human aminoacylase-i 0.8304 65 241
4ruh-assembly1.cif.gz_B crystal structure of human carnosinase-2 (cn2) in complex with inhibitor, bestatin at 2.25 a 0.8106 53 533
3dlj-assembly3.cif.gz_B crystal structure of human carnosine dipeptidase 1 0.8094 52 531
4ruh-assembly1.cif.gz_A crystal structure of human carnosinase-2 (cn2) in complex with inhibitor, bestatin at 2.25 a 0.808 53 533
4ruh-assembly1.cif.gz_B crystal structure of human carnosinase-2 (cn2) in complex with inhibitor, bestatin at 2.25 a 0.8073 53 533
ID Description Score Start End Superfamily
4mmoB02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8907 248 418 3.30.70.360
4mmoA01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8796 66 244 3.40.630.10
2pokB02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8676 248 424 3.30.70.360
4mmoB02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8561 248 418 3.30.70.360
2pokB02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8536 248 424 3.30.70.360
ID Description Score Start End GO Terms
AF-A0A2V8E1C2-F1-model_v4 Rhodanese domain-containing protein 0.9546 51 534 GO:0006508
GO:0008233
AF-A0A5B9EAF9-F1-model_v4 M20/M25/M40 family metallo-hydrolase 0.9523 10 534 GO:0006508
GO:0008233
AF-A0A2E4G5C5-F1-model_v4 Uncharacterized protein 0.9461 15 529 GO:0006508
GO:0008233
AF-A0A5B9EAF9-F1-model_v4 M20/M25/M40 family metallo-hydrolase 0.935 10 534 GO:0006508
GO:0008233
AF-A0A2E4G5C5-F1-model_v4 Uncharacterized protein 0.9335 15 529 GO:0006508
GO:0008233

Map