F338628

General Info

Members Datasets Scaffolds Average Seq Length
226 129 452 147

Family's Representative Sequence

Representative Sequence 3300005458|Ga0070681_10492675|Ga0070681_104926752
Length 152
Sequence MADRVQFELVTPERLVLSAEVEMVVVPGTEGNFGVLPGHSPLISTIRPGMIEIYETRPTVSERIFVVSGIAEVTPERCTVLAEEAVAPSALNRGETEAELQTIEGNLPSLREQVGRATGADRDRLVGELRLLEQQQAVARAKLQALAADTAH

Samples

Sample ID Description Type Environment
1 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
30 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
33 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
34 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
42 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
43 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
44 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
45 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
46 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
47 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
48 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
49 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
50 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
71 3300029285 Sorghum rhizosphere microbial communities from UC West Side Research & Extension Center, Five Points, CA, USA - TP3.B3.stno.R1 Metatranscriptome Rhizosphere
72 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
73 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
74 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
75 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
76 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
77 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
78 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
79 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
80 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
81 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
82 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
83 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
84 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
85 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
86 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
87 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
88 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
89 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
90 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
91 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
92 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
93 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
94 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
95 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
96 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
97 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
98 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
99 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
100 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
101 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
102 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
103 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
104 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
105 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
106 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
107 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
108 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
109 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
110 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
111 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
112 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
113 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
114 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
115 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
116 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
117 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
118 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
120 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
121 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
122 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
123 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
124 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
125 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
126 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
127 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
128 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
129 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.56
Metatranscriptomes 0.44
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.88
Nodule 0
Rhizoplane 2.21
Rhizosphere 83.19
Stem 0
Stem Tuber 0
Unclassified 1.77

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070681_10492675 3300005458 Bacteria 1139
2 Ga0065712_10608582 3300005290 Bacteria 587
3 Ga0070690_100240370 3300005330 Bacteria 1277
4 Ga0070666_10193339 3300005335 Bacteria 1430
5 Ga0070689_101069902 3300005340 Bacteria 720
6 Ga0070689_101223131 3300005340 Unclassified 675
7 Ga0070671_100771808 3300005355 Bacteria 836
8 Ga0070673_100882509 3300005364 Bacteria 829
9 Ga0070709_10016468 3300005434 Bacteria 4221
10 Ga0070709_10312024 3300005434 Bacteria 1151
11 Ga0070709_10804988 3300005434 Bacteria 738
12 Ga0070714_100166586 3300005435 Bacteria 1997
13 Ga0070714_100171592 3300005435 Bacteria 1968
14 Ga0070714_100568748 3300005435 Bacteria 1086
15 Ga0070713_100065505 3300005436 Bacteria 3052
16 Ga0070713_100168504 3300005436 Bacteria 1960
17 Ga0070713_100329402 3300005436 Bacteria 1412
18 Ga0070713_100422729 3300005436 Bacteria 1248
19 Ga0070710_10003679 3300005437 Bacteria 7252
20 Ga0070710_10245452 3300005437 Bacteria 1149
21 Ga0070711_100010621 3300005439 Bacteria 5704
22 Ga0070711_100213898 3300005439 Bacteria 1494
23 Ga0070711_100793556 3300005439 Bacteria 803
24 Ga0070711_101461684 3300005439 Bacteria 596
25 Ga0070705_100244836 3300005440 Bacteria 1255
26 Ga0070708_100049455 3300005445 Bacteria 3719
27 Ga0070708_100614334 3300005445 Bacteria 1025
28 Ga0070681_10982920 3300005458 Bacteria 764
29 Ga0068867_101169779 3300005459 Bacteria 705
30 Ga0070685_10697824 3300005466 Bacteria 740
31 Ga0070706_100045374 3300005467 Bacteria 4060
32 Ga0070706_100050771 3300005467 Bacteria 3827
33 Ga0070706_100339751 3300005467 Bacteria 1400
34 Ga0070707_100002926 3300005468 Bacteria 16198
35 Ga0070707_101272794 3300005468 Bacteria 702
36 Ga0070698_100007539 3300005471 Bacteria 11767
37 Ga0070698_100069695 3300005471 Bacteria 3529
38 Ga0070698_100711344 3300005471 Bacteria 947
39 Ga0070699_100058972 3300005518 Bacteria 3325
40 Ga0070699_100976098 3300005518 Bacteria 777
41 Ga0070697_100294674 3300005536 Bacteria 1394
42 Ga0070697_100625778 3300005536 Bacteria 947
43 Ga0070697_100747959 3300005536 Bacteria 864
44 Ga0068855_100414327 3300005563 Bacteria 1475
45 Ga0070664_100368051 3300005564 Bacteria 1310
46 Ga0068856_100038422 3300005614 Bacteria 4699
47 Ga0068856_100788782 3300005614 Bacteria 970
48 Ga0068864_101518438 3300005618 Bacteria 673
49 Ga0068858_100665525 3300005842 Bacteria 1012
50 Ga0068858_101254814 3300005842 Bacteria 729
51 Ga0081540_1023797 3300005983 Bacteria 3570
52 Ga0070717_10001149 3300006028 Bacteria 17878
53 Ga0070717_10081893 3300006028 Bacteria 2711
54 Ga0070717_10105386 3300006028 Bacteria 2400
55 Ga0070717_10558825 3300006028 Bacteria 1037
56 Ga0070716_100266327 3300006173 Bacteria 1175
57 Ga0070712_100035076 3300006175 Bacteria 3403
58 Ga0070712_100156677 3300006175 Bacteria 1755
59 Ga0070712_100256487 3300006175 Bacteria 1400
60 Ga0070712_100382074 3300006175 Bacteria 1159
61 Ga0070712_100558992 3300006175 Bacteria 965
62 Ga0075433_10784162 3300006852 Bacteria 833
63 Ga0075436_100167603 3300006914 Bacteria 1550
64 Ga0075436_100666255 3300006914 Bacteria 769
65 Ga0075435_101983484 3300007076 Bacteria 511
66 Ga0099795_10075048 3300007788 Bacteria 1283
67 Ga0105240_10589452 3300009093 Bacteria 1225
68 Ga0111539_10419755 3300009094 Bacteria 1558
69 Ga0105241_12304463 3300009174 Bacteria 536
70 Ga0105248_10517347 3300009177 Bacteria 1346
71 Ga0099796_10002107 3300010159 Bacteria 4269
72 Ga0105239_10717708 3300010375 Bacteria 1143
73 Ga0163162_10881549 3300013306 Bacteria 1009
74 Ga0182008_10182530 3300014497 Bacteria 1062
75 Ga0157379_10650367 3300014968 Bacteria 987
76 Ga0157379_10848840 3300014968 Bacteria 864
77 Ga0182007_10150028 3300015262 Bacteria 792
78 Ga0213873_10024053 3300021358 Bacteria 1458
79 Ga0213872_10056031 3300021361 Bacteria 1786
80 Ga0213872_10060416 3300021361 Bacteria 1714
81 Ga0213872_10062891 3300021361 Bacteria 1677
82 Ga0213872_10237999 3300021361 Bacteria 770
83 Ga0213874_10026118 3300021377 Bacteria 1652
84 Ga0213874_10297361 3300021377 Bacteria 607
85 Ga0213876_10126611 3300021384 Bacteria 1357
86 Ga0213876_10219580 3300021384 Bacteria 1010
87 Ga0213875_10000098 3300021388 Bacteria 98684
88 Ga0213875_10001111 3300021388 Bacteria 18660
89 Ga0213875_10023627 3300021388 Bacteria 2935
90 Ga0213875_10160003 3300021388 Bacteria 1056
91 Ga0207692_10017476 3300025898 Bacteria 3200
92 Ga0207692_10035178 3300025898 Bacteria 2432
93 Ga0207699_10175672 3300025906 Bacteria 1436
94 Ga0207684_10017959 3300025910 Bacteria 6062
95 Ga0207684_10029748 3300025910 Bacteria 4650
96 Ga0207684_10186877 3300025910 Bacteria 1787
97 Ga0207707_10229556 3300025912 Bacteria 1615
98 Ga0207693_10001097 3300025915 Bacteria 24341
99 Ga0207693_10011618 3300025915 Bacteria 7125
100 Ga0207693_10037034 3300025915 Bacteria 3845
101 Ga0207693_10577944 3300025915 Bacteria 875
102 Ga0207663_10021465 3300025916 Bacteria 3677
103 Ga0207663_10537043 3300025916 Bacteria 913
104 Ga0207663_10686160 3300025916 Bacteria 810
105 Ga0207663_10839567 3300025916 Bacteria 733
106 Ga0207646_10145907 3300025922 Bacteria 2132
107 Ga0207700_10006327 3300025928 Bacteria 7140
108 Ga0207700_10206353 3300025928 Bacteria 1659
109 Ga0207700_10412685 3300025928 Bacteria 1185
110 Ga0207700_10490884 3300025928 Bacteria 1086
111 Ga0207700_10624963 3300025928 Bacteria 959
112 Ga0207664_10017345 3300025929 Bacteria 5276
113 Ga0207664_10019175 3300025929 Bacteria 5051
114 Ga0207664_10123812 3300025929 Bacteria 2168
115 Ga0207644_10200439 3300025931 Bacteria 1574
116 Ga0207665_10221084 3300025939 Bacteria 1388
117 Ga0207691_10658004 3300025940 Bacteria 885
118 Ga0207711_10629571 3300025941 Bacteria 1001
119 Ga0207679_10300713 3300025945 Bacteria 1383
120 Ga0207667_10357491 3300025949 Bacteria 1489
121 Ga0207651_10838771 3300025960 Bacteria 816
122 Ga0207703_10440328 3300026035 Bacteria 1216
123 Ga0207703_11117502 3300026035 Bacteria 757
124 Ga0207702_10292636 3300026078 Bacteria 1543
125 Ga0207676_11069632 3300026095 Bacteria 797
126 Ga0268265_11579096 3300028380 Unclassified 661
127 Ga0265338_10873055 3300028800 Bacteria 614
128 Ga0310981_1037987 3300029285 Bacteria 1224
129 Ga0265330_10308305 3300031235 Bacteria 667
130 Ga0265327_10004295 3300031251 Bacteria 12727
131 Ga0373940_0047298 3300035088 Bacteria 1199
132 Ga0373949_0038228 3300035090 Bacteria 1170
133 Ga0373923_0141947 3300035111 Bacteria 1086
134 Ga0373939_0068392 3300035114 Bacteria 1150
135 Ga0373945_0311639 3300035116 Unclassified 676
136 Ga0373953_0005597 3300035117 Bacteria 4089
137 Ga0373954_0011679 3300035118 Bacteria 3896
138 Ga0373956_0020510 3300035119 Bacteria 2813
139 Ga0373957_0003287 3300035120 Bacteria 4760
140 Ga0373957_0371453 3300035120 Bacteria 613
141 Ga0373960_0075606 3300035121 Bacteria 1050
142 Ga0373943_0195627 3300035170 Bacteria 1117
143 Ga0373955_0260631 3300035172 Bacteria 1041
144 Ga0373961_0120710 3300035241 Bacteria 868
145 Ga0373924_0024883 3300035410 Bacteria 2363
146 Ga0373931_0285165 3300035691 Bacteria 1015
147 Ga0373935_0284401 3300035692 Bacteria 1165
148 Ga0373933_0133820 3300035724 Bacteria 1560
149 Ga0373933_0488324 3300035724 Bacteria 807
150 Ga0373937_0005198 3300036401 Bacteria 11109
151 Ga0373937_0006823 3300036401 Bacteria 9852
152 Ga0373937_0122073 3300036401 Bacteria 2428
153 Ga0373925_0480305 3300037068 Bacteria 1019
154 Ga0373925_0590420 3300037068 Bacteria 914
155 Ga0436364_0194315 3300037853 Bacteria 17361
156 Ga0436364_0271578 3300037853 Bacteria 2742
157 Ga0436364_0455724 3300037853 Bacteria 2446
158 Ga0436364_0485256 3300037853 Bacteria 44626
159 Ga0436364_1196213 3300037853 Bacteria 1023
160 Ga0436364_1390920 3300037853 Bacteria 113944
161 Ga0436364_1442611 3300037853 Bacteria 853
162 Ga0436365_0049778 3300039437 Bacteria 589
163 Ga0436365_0073052 3300039437 Bacteria 836
164 Ga0436365_0403012 3300039437 Bacteria 1015
165 Ga0436365_0412104 3300039437 Bacteria 2049
166 Ga0436365_0481674 3300039437 Unclassified 929
167 Ga0436365_1264542 3300039437 Bacteria 1334
168 Ga0436365_1266641 3300039437 Bacteria 1017
169 Ga0436365_1736100 3300039437 Bacteria 2058
170 Ga0436365_1771643 3300039437 Bacteria 919
171 Ga0436365_1868409 3300039437 Bacteria 750
172 Ga0436360_0637005 3300039438 Bacteria 1621
173 Ga0436360_0880516 3300039438 Bacteria 1311
174 Ga0436360_1060360 3300039438 Bacteria 1994
175 Ga0436360_1279209 3300039438 Bacteria 1436
176 Ga0436360_1319395 3300039438 Bacteria 1702
177 Ga0436361_0193200 3300039447 Bacteria 798
178 Ga0436361_0209046 3300039447 Bacteria 1603
179 Ga0436361_0367470 3300039447 Bacteria 1566
180 Ga0436361_0397264 3300039447 Bacteria 794
181 Ga0436361_0545145 3300039447 Bacteria 2069
182 Ga0436361_1174261 3300039447 Bacteria 4609
183 Ga0436361_1187064 3300039447 Bacteria 1043
184 Ga0436363_0077850 3300039450 Bacteria 3480
185 Ga0436363_1241344 3300039450 Bacteria 989
186 Ga0436363_1351794 3300039450 Bacteria 2242
187 Ga0436363_1603072 3300039450 Bacteria 548
188 Ga0436363_1678372 3300039450 Bacteria 1558
189 Ga0436362_0547881 3300039453 Bacteria 711
190 Ga0436362_0573569 3300039453 Bacteria 1948
191 Ga0436362_0740663 3300039453 Bacteria 3429
192 Ga0436362_0934980 3300039453 Bacteria 916
193 Ga0436362_1123400 3300039453 Bacteria 5439
194 Ga0466971_0598867 3300044719 Bacteria 549
195 Ga0466967_0401434 3300045976 Bacteria 1334
196 Ga0495592_0160775 3300046454 Bacteria 1546
197 Ga0495629_0149062 3300046459 Bacteria 1626
198 Ga0495580_0177680 3300046472 Bacteria 1470
199 Ga0495639_0145657 3300046475 Bacteria 1141
200 Ga0495594_0522723 3300046499 Bacteria 674
201 Ga0495586_0180994 3300046535 Bacteria 1192
202 Ga0495667_0027721 3300046559 Bacteria 3814
203 Ga0495635_0055876 3300046663 Bacteria 2719
204 Ga0495657_0204370 3300046675 Bacteria 1203
205 Ga0495599_0061388 3300046678 Bacteria 2349
206 Ga0495680_0112284 3300047322 Bacteria 2019
207 Ga0495680_0235571 3300047322 Bacteria 1302
208 Ga0496104_0450794 3300048907 Bacteria 1198
209 Ga0496108_0389452 3300048911 Bacteria 1217
210 Ga0496109_0211418 3300048912 Bacteria 1824
211 Ga0496111_0416701 3300048914 Bacteria 992
212 Ga0496112_0359726 3300048915 Bacteria 1397
213 Ga0496120_0131627 3300048923 Bacteria 1280
214 Ga0501047_1262745 3300049581 Bacteria 552
215 Ga0501035_0534663 3300049822 Bacteria 962
216 nmdc:mga08y16_290286_c1 3300050511 Bacteria 1686
217 nmdc:mga0rr50_327222_c1 3300050513 Bacteria 1286
218 nmdc:mga08x19_72618_c1 3300050514 Bacteria 2245
219 nmdc:mga0a205_836903_c1 3300050515 Bacteria 767
220 Ga0495601_0103474 3300053077 Bacteria 1840
221 Ga0495612_0304397 3300053078 Bacteria 715
222 Ga0495595_0074075 3300053084 Bacteria 1613
223 Ga0495619_0006933 3300053085 Bacteria 7165
224 Ga0495619_0086591 3300053085 Bacteria 2118
225 Ga0500572_153565 3300053111 Bacteria 752
226 Ga0500601_002822 3300053737 Bacteria 1872
227 Ga0070681_10492675
228 Ga0065712_10608582
229 Ga0070690_100240370
230 Ga0070666_10193339
231 Ga0070689_101069902
232 Ga0070689_101223131
233 Ga0070671_100771808
234 Ga0070673_100882509
235 Ga0070709_10016468
236 Ga0070709_10312024
237 Ga0070709_10804988
238 Ga0070714_100166586
239 Ga0070714_100171592
240 Ga0070714_100568748
241 Ga0070713_100065505
242 Ga0070713_100168504
243 Ga0070713_100329402
244 Ga0070713_100422729
245 Ga0070710_10003679
246 Ga0070710_10245452
247 Ga0070711_100010621
248 Ga0070711_100213898
249 Ga0070711_100793556
250 Ga0070711_101461684
251 Ga0070705_100244836
252 Ga0070708_100049455
253 Ga0070708_100614334
254 Ga0070681_10982920
255 Ga0068867_101169779
256 Ga0070685_10697824
257 Ga0070706_100045374
258 Ga0070706_100050771
259 Ga0070706_100339751
260 Ga0070707_100002926
261 Ga0070707_101272794
262 Ga0070698_100007539
263 Ga0070698_100069695
264 Ga0070698_100711344
265 Ga0070699_100058972
266 Ga0070699_100976098
267 Ga0070697_100294674
268 Ga0070697_100625778
269 Ga0070697_100747959
270 Ga0068855_100414327
271 Ga0070664_100368051
272 Ga0068856_100038422
273 Ga0068856_100788782
274 Ga0068864_101518438
275 Ga0068858_100665525
276 Ga0068858_101254814
277 Ga0081540_1023797
278 Ga0070717_10001149
279 Ga0070717_10081893
280 Ga0070717_10105386
281 Ga0070717_10558825
282 Ga0070716_100266327
283 Ga0070712_100035076
284 Ga0070712_100156677
285 Ga0070712_100256487
286 Ga0070712_100382074
287 Ga0070712_100558992
288 Ga0075433_10784162
289 Ga0075436_100167603
290 Ga0075436_100666255
291 Ga0075435_101983484
292 Ga0099795_10075048
293 Ga0105240_10589452
294 Ga0111539_10419755
295 Ga0105241_12304463
296 Ga0105248_10517347
297 Ga0099796_10002107
298 Ga0105239_10717708
299 Ga0163162_10881549
300 Ga0182008_10182530
301 Ga0157379_10650367
302 Ga0157379_10848840
303 Ga0182007_10150028
304 Ga0213873_10024053
305 Ga0213872_10056031
306 Ga0213872_10060416
307 Ga0213872_10062891
308 Ga0213872_10237999
309 Ga0213874_10026118
310 Ga0213874_10297361
311 Ga0213876_10126611
312 Ga0213876_10219580
313 Ga0213875_10000098
314 Ga0213875_10001111
315 Ga0213875_10023627
316 Ga0213875_10160003
317 Ga0207692_10017476
318 Ga0207692_10035178
319 Ga0207699_10175672
320 Ga0207684_10017959
321 Ga0207684_10029748
322 Ga0207684_10186877
323 Ga0207707_10229556
324 Ga0207693_10001097
325 Ga0207693_10011618
326 Ga0207693_10037034
327 Ga0207693_10577944
328 Ga0207663_10021465
329 Ga0207663_10537043
330 Ga0207663_10686160
331 Ga0207663_10839567
332 Ga0207646_10145907
333 Ga0207700_10006327
334 Ga0207700_10206353
335 Ga0207700_10412685
336 Ga0207700_10490884
337 Ga0207700_10624963
338 Ga0207664_10017345
339 Ga0207664_10019175
340 Ga0207664_10123812
341 Ga0207644_10200439
342 Ga0207665_10221084
343 Ga0207691_10658004
344 Ga0207711_10629571
345 Ga0207679_10300713
346 Ga0207667_10357491
347 Ga0207651_10838771
348 Ga0207703_10440328
349 Ga0207703_11117502
350 Ga0207702_10292636
351 Ga0207676_11069632
352 Ga0268265_11579096
353 Ga0265338_10873055
354 Ga0310981_1037987
355 Ga0265330_10308305
356 Ga0265327_10004295
357 Ga0373940_0047298
358 Ga0373949_0038228
359 Ga0373923_0141947
360 Ga0373939_0068392
361 Ga0373945_0311639
362 Ga0373953_0005597
363 Ga0373954_0011679
364 Ga0373956_0020510
365 Ga0373957_0003287
366 Ga0373957_0371453
367 Ga0373960_0075606
368 Ga0373943_0195627
369 Ga0373955_0260631
370 Ga0373961_0120710
371 Ga0373924_0024883
372 Ga0373931_0285165
373 Ga0373935_0284401
374 Ga0373933_0133820
375 Ga0373933_0488324
376 Ga0373937_0005198
377 Ga0373937_0006823
378 Ga0373937_0122073
379 Ga0373925_0480305
380 Ga0373925_0590420
381 Ga0436364_0194315
382 Ga0436364_0271578
383 Ga0436364_0455724
384 Ga0436364_0485256
385 Ga0436364_1196213
386 Ga0436364_1390920
387 Ga0436364_1442611
388 Ga0436365_0049778
389 Ga0436365_0073052
390 Ga0436365_0403012
391 Ga0436365_0412104
392 Ga0436365_0481674
393 Ga0436365_1264542
394 Ga0436365_1266641
395 Ga0436365_1736100
396 Ga0436365_1771643
397 Ga0436365_1868409
398 Ga0436360_0637005
399 Ga0436360_0880516
400 Ga0436360_1060360
401 Ga0436360_1279209
402 Ga0436360_1319395
403 Ga0436361_0193200
404 Ga0436361_0209046
405 Ga0436361_0367470
406 Ga0436361_0397264
407 Ga0436361_0545145
408 Ga0436361_1174261
409 Ga0436361_1187064
410 Ga0436363_0077850
411 Ga0436363_1241344
412 Ga0436363_1351794
413 Ga0436363_1603072
414 Ga0436363_1678372
415 Ga0436362_0547881
416 Ga0436362_0573569
417 Ga0436362_0740663
418 Ga0436362_0934980
419 Ga0436362_1123400
420 Ga0466971_0598867
421 Ga0466967_0401434
422 Ga0495592_0160775
423 Ga0495629_0149062
424 Ga0495580_0177680
425 Ga0495639_0145657
426 Ga0495594_0522723
427 Ga0495586_0180994
428 Ga0495667_0027721
429 Ga0495635_0055876
430 Ga0495657_0204370
431 Ga0495599_0061388
432 Ga0495680_0112284
433 Ga0495680_0235571
434 Ga0496104_0450794
435 Ga0496108_0389452
436 Ga0496109_0211418
437 Ga0496111_0416701
438 Ga0496112_0359726
439 Ga0496120_0131627
440 Ga0501047_1262745
441 Ga0501035_0534663
442 nmdc:mga08y16_290286_c1
443 nmdc:mga0rr50_327222_c1
444 nmdc:mga08x19_72618_c1
445 nmdc:mga0a205_836903_c1
446 Ga0495601_0103474
447 Ga0495612_0304397
448 Ga0495595_0074075
449 Ga0495619_0006933
450 Ga0495619_0086591
451 Ga0500572_153565
452 Ga0500601_002822

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02823

ATP-synt_DE_N

ATP synthase, Delta/Epsilon chain, beta-sandwich domain

5

85

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5dn6-assembly1.cif.gz_I atp synthase from paracoccus denitrificans 0.9108 8 79
1h8e-assembly1.cif.gz_H (adp.alf4)2(adp.so4) bovine f1-atpase (all three catalytic sites occupied) 0.9061 3 88
4pju-assembly1.cif.gz_A crystal structure of human stromal antigen 2 (sa2) in complex with sister chromatid cohesion protein 1 (scc1) 0.903 92 145
6ree-assembly1.cif.gz_R cryo-em structure of polytomella f-atp synthase, rotary substate 3b, composite map 0.9022 4 139
7nk9-assembly1.cif.gz_H mycobacterium smegmatis atp synthase fo domain state 1 0.8874 19 77
ID Description Score Start End Superfamily
af_A0A0R0H8M3_1_64_2.60.15.10 Mainly Beta;Sandwich;ATP Synthase; domain 1;F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.9506 1 51 2.60.15.10
2e5yB01 Mainly Beta;Sandwich;ATP Synthase; domain 1;F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.9413 2 88 2.60.15.10
af_P00835_1_88_2.60.15.10 Mainly Beta;Sandwich;ATP Synthase; domain 1;F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.9308 1 88 2.60.15.10
af_I1JML1_57_153_2.60.15.10 Mainly Beta;Sandwich;ATP Synthase; domain 1;F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.9298 2 88 2.60.15.10
af_A4I651_36_136_2.60.15.10 Mainly Beta;Sandwich;ATP Synthase; domain 1;F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.9245 2 88 2.60.15.10
ID Description Score Start End GO Terms
AF-A0A537UZD4-F1-model_v4 ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit) 0.9807 2 148 GO:0005524
GO:0005886
GO:0012505
GO:0045261
GO:0046933
AF-A0A077AQW8-F1-model_v4 ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit) 0.9749 2 83 GO:0005524
GO:0005886
GO:0012505
GO:0016787
GO:0045261
GO:0046933
AF-A0A258IJR8-F1-model_v4 ATP synthase F1 complex delta/epsilon subunit N-terminal domain-containing protein 0.974 3 84 GO:0012505
GO:0045261
GO:0046933
AF-A0A7W0NUT7-F1-model_v4 ATP synthase F1 subunit epsilon 0.9709 3 80 GO:0012505
GO:0045261
GO:0046933
AF-A0A4P5SIZ8-F1-model_v4 ATP synthase F1 complex delta/epsilon subunit N-terminal domain-containing protein 0.9691 1 79 GO:0012505
GO:0045261
GO:0046933

Map