F338490

General Info

Members Datasets Scaffolds Average Seq Length
226 151 452 231

Family's Representative Sequence

Representative Sequence 3300005329|Ga0070683_100007020|Ga0070683_1000070205
Length 253
Sequence MAISVTTHGQYLTQIEKSTILFPINCYLVREDDGLTLVDTNWTKTADAILAAAKQLGAPIRRIALTHVHGDHVGSLDPLHQALPDADVLVGVREARLLARDFSLDAEEAQTKPRGDYPVIATRPTGMLQPGDMVGSLRVIASPGHTPGHIAFLDTRDGTLIAGDALFTYTGIGVAGMFRLRFPFSSMATWDKATSLRTARALAELQPSRLAVGHGPVLEAPVAAMKQAIDSAAQRFPNEGVRDSSVMGNAGMA

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
39 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
40 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
57 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
58 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
59 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
60 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
61 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
82 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
83 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
84 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
85 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
86 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
87 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
88 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
89 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
90 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
91 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
92 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
93 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
94 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
95 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
96 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
97 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
98 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
99 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
100 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
101 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
102 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
103 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
104 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
105 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
106 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
107 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
108 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
109 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
110 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
111 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
112 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
113 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
114 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
115 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
116 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
117 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
118 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
119 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
120 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
121 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
122 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
123 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
124 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
125 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
126 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
127 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
128 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
138 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
139 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
140 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
141 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
142 3300049650 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_A_0_drought Metagenome Rhizosphere
143 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
144 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
145 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
146 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
147 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
148 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
149 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
150 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
151 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.56
Metatranscriptomes 0.44
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 12.39
Rhizosphere 84.07
Stem 0
Stem Tuber 0
Unclassified 7.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100007020 3300005329 Bacteria 9480
2 JGI25407J50210_10011023 3300003373 Bacteria 2307
3 Ga0070683_100160839 3300005329 Unclassified 2131
4 Ga0070682_100175154 3300005337 Bacteria 1494
5 Ga0068868_100592005 3300005338 Bacteria 982
6 Ga0070660_100369025 3300005339 Bacteria 1184
7 Ga0070691_10001746 3300005341 Bacteria 9439
8 Ga0070691_10229041 3300005341 Unclassified 988
9 Ga0070687_100097196 3300005343 Bacteria 1641
10 Ga0070703_10065741 3300005406 Bacteria 1198
11 Ga0070714_100003354 3300005435 Bacteria 11931
12 Ga0070714_100370662 3300005435 Bacteria 1348
13 Ga0070714_100598978 3300005435 Bacteria 1058
14 Ga0070713_100000594 3300005436 Bacteria 23010
15 Ga0070700_100218221 3300005441 Bacteria 1350
16 Ga0070708_100002895 3300005445 Bacteria 13327
17 Ga0070708_100086936 3300005445 Unclassified 2840
18 Ga0070708_100136722 3300005445 Bacteria 2271
19 Ga0070663_100036722 3300005455 Bacteria 3405
20 Ga0070663_100400697 3300005455 Unclassified 1121
21 Ga0068867_100469038 3300005459 Bacteria 1076
22 Ga0070685_10141755 3300005466 Bacteria 1514
23 Ga0070706_100001987 3300005467 Bacteria 21084
24 Ga0070706_100008607 3300005467 Bacteria 9512
25 Ga0070706_100103539 3300005467 Bacteria 2646
26 Ga0070706_100493454 3300005467 Bacteria 1139
27 Ga0070707_100002336 3300005468 Bacteria 18091
28 Ga0070707_100012897 3300005468 Bacteria 7806
29 Ga0070698_100006028 3300005471 Bacteria 13203
30 Ga0070698_100392466 3300005471 Unclassified 1321
31 Ga0070698_100445240 3300005471 Bacteria 1231
32 Ga0070699_100003523 3300005518 Bacteria 13840
33 Ga0070699_100018813 3300005518 Bacteria 5933
34 Ga0070699_100371253 3300005518 Bacteria 1291
35 Ga0070679_100019459 3300005530 Bacteria 6601
36 Ga0070679_100264250 3300005530 Bacteria 1676
37 Ga0070684_100001232 3300005535 Bacteria 18364
38 Ga0070684_100030189 3300005535 Bacteria 4603
39 Ga0070697_100001405 3300005536 Bacteria 18269
40 Ga0070697_100097777 3300005536 Bacteria 2436
41 Ga0068853_100814994 3300005539 Bacteria 894
42 Ga0070672_100435892 3300005543 Bacteria 1127
43 Ga0070672_100561230 3300005543 Bacteria 992
44 Ga0070695_100383333 3300005545 Bacteria 1061
45 Ga0070665_100001104 3300005548 Bacteria 33298
46 Ga0068855_100485058 3300005563 Bacteria 1345
47 Ga0070664_100061810 3300005564 Bacteria 3193
48 Ga0068857_100000089 3300005577 Bacteria 52738
49 Ga0068857_100024796 3300005577 Bacteria 5283
50 Ga0068857_101195582 3300005577 Bacteria 736
51 Ga0068854_100465205 3300005578 Bacteria 1059
52 Ga0068856_100000188 3300005614 Bacteria 64727
53 Ga0070702_100007122 3300005615 Bacteria 5341
54 Ga0068859_100160978 3300005617 Bacteria 2324
55 Ga0068864_100540847 3300005618 Bacteria 1125
56 Ga0068864_100695082 3300005618 Unclassified 993
57 Ga0068866_10536148 3300005718 Bacteria 780
58 Ga0068861_100057354 3300005719 Bacteria 2975
59 Ga0068860_100845499 3300005843 Bacteria 930
60 Ga0081538_10026080 3300005981 Bacteria 4099
61 Ga0070717_10008088 3300006028 Bacteria 7843
62 Ga0070717_10051421 3300006028 Bacteria 3391
63 Ga0070717_10185912 3300006028 Bacteria 1813
64 Ga0075436_100019106 3300006914 Bacteria 4695
65 Ga0097620_100160964 3300006931 Bacteria 2324
66 Ga0099794_10001650 3300007265 Bacteria 7879
67 Ga0099794_10035726 3300007265 Bacteria 2346
68 Ga0099794_10154211 3300007265 Unclassified 1167
69 Ga0105245_10028318 3300009098 Bacteria 4941
70 Ga0105241_10525869 3300009174 Bacteria 1058
71 Ga0105237_10117293 3300009545 Bacteria 2656
72 Ga0105239_10770402 3300010375 Bacteria 1102
73 Ga0157370_10267469 3300013104 Bacteria 1580
74 Ga0157369_10000715 3300013105 Bacteria 42688
75 Ga0157374_10458624 3300013296 Bacteria 1276
76 Ga0157378_10353539 3300013297 Bacteria 1436
77 Ga0157372_10116027 3300013307 Bacteria 3070
78 Ga0157375_10873813 3300013308 Bacteria 1044
79 Ga0157375_10999025 3300013308 Bacteria 976
80 Ga0163163_10171654 3300014325 Bacteria 2215
81 Ga0163163_11084734 3300014325 Bacteria 864
82 Ga0157377_10014502 3300014745 Bacteria 4011
83 Ga0157379_10001943 3300014968 Bacteria 17101
84 Ga0213873_10019579 3300021358 Bacteria 1571
85 Ga0213872_10001758 3300021361 Bacteria 13576
86 Ga0213872_10003203 3300021361 Bacteria 9167
87 Ga0213872_10009532 3300021361 Bacteria 4655
88 Ga0213876_10016905 3300021384 Bacteria 3854
89 Ga0213876_10288735 3300021384 Unclassified 872
90 Ga0213875_10031724 3300021388 Bacteria 2498
91 Ga0213871_10000150 3300021441 Bacteria 7291
92 Ga0224712_10116668 3300022467 Bacteria 1151
93 Ga0207653_10017974 3300025885 Bacteria 2227
94 Ga0207684_10003310 3300025910 Bacteria 15815
95 Ga0207684_10003563 3300025910 Bacteria 15147
96 Ga0207684_10028717 3300025910 Bacteria 4738
97 Ga0207684_10058174 3300025910 Bacteria 3280
98 Ga0207646_10003100 3300025922 Bacteria 19106
99 Ga0207646_10012967 3300025922 Bacteria 7989
100 Ga0207646_10033662 3300025922 Bacteria 4632
101 Ga0207700_10000598 3300025928 Bacteria 21075
102 Ga0207700_10521333 3300025928 Unclassified 1053
103 Ga0207664_10003263 3300025929 Bacteria 10777
104 Ga0207664_10423513 3300025929 Bacteria 1186
105 Ga0207690_10475654 3300025932 Bacteria 1008
106 Ga0207709_10052673 3300025935 Bacteria 2501
107 Ga0207709_10548503 3300025935 Bacteria 909
108 Ga0207661_10000075 3300025944 Bacteria 68028
109 Ga0207661_10094569 3300025944 Bacteria 2497
110 Ga0207661_10378524 3300025944 Bacteria 1281
111 Ga0207679_10168638 3300025945 Bacteria 1800
112 Ga0207679_10440503 3300025945 Bacteria 1154
113 Ga0207678_10041905 3300026067 Bacteria 3968
114 Ga0207678_10539586 3300026067 Bacteria 1019
115 Ga0207708_10016092 3300026075 Bacteria 5617
116 Ga0207702_10002788 3300026078 Bacteria 16380
117 Ga0207648_10252846 3300026089 Bacteria 1571
118 Ga0207676_10206188 3300026095 Bacteria 1741
119 Ga0207674_10000028 3300026116 Bacteria 149277
120 Ga0207674_10033795 3300026116 Bacteria 5351
121 Ga0207675_100011232 3300026118 Bacteria 8388
122 Ga0207683_10413886 3300026121 Bacteria 1241
123 Ga0209588_1005741 3300027671 Unclassified 3569
124 Ga0268265_10406103 3300028380 Bacteria 1261
125 Ga0265340_10146341 3300031247 Bacteria 1079
126 Ga0307416_100136571 3300032002 Bacteria 2219
127 Ga0373954_0032351 3300035118 Bacteria 2417
128 Ga0373956_0001112 3300035119 Bacteria 11081
129 Ga0373927_0000006 3300035695 Bacteria 208965
130 Ga0373933_0003948 3300035724 Bacteria 8189
131 Ga0373933_0034769 3300035724 Bacteria 2939
132 Ga0373933_0236696 3300035724 Bacteria 1174
133 Ga0373937_0060493 3300036401 Bacteria 3481
134 Ga0373937_0172426 3300036401 Bacteria 2030
135 Ga0373937_0540759 3300036401 Bacteria 1107
136 Ga0373937_0817054 3300036401 Bacteria 880
137 Ga0395900_0006708 3300037418 Bacteria 11955
138 Ga0395898_0002203 3300037466 Bacteria 23801
139 Ga0395898_0199431 3300037466 Bacteria 1911
140 Ga0395898_0236597 3300037466 Bacteria 1742
141 Ga0395898_0600887 3300037466 Bacteria 1043
142 Ga0436364_0675475 3300037853 Bacteria 968
143 Ga0436364_1121514 3300037853 Bacteria 1820
144 Ga0436365_0184712 3300039437 Bacteria 51527
145 Ga0436365_1818479 3300039437 Bacteria 1417
146 Ga0436360_0639377 3300039438 Bacteria 12376
147 Ga0436361_0311924 3300039447 Bacteria 7355
148 Ga0436361_0465153 3300039447 Bacteria 16350
149 Ga0436363_0846772 3300039450 Unclassified 1897
150 Ga0436362_1260799 3300039453 Bacteria 2617
151 Ga0466969_0019497 3300044656 Bacteria 3524
152 Ga0466969_0033585 3300044656 Bacteria 2604
153 Ga0466969_0090820 3300044656 Bacteria 1447
154 Ga0466965_0001521 3300044683 Bacteria 9409
155 Ga0466966_0003235 3300044684 Bacteria 10737
156 Ga0466961_0011477 3300044693 Bacteria 5666
157 Ga0466971_0040787 3300044719 Bacteria 2085
158 Ga0466968_0003603 3300044735 Bacteria 5734
159 Ga0466957_0021172 3300044842 Bacteria 3830
160 Ga0466960_0002022 3300044901 Bacteria 7527
161 Ga0466959_0003386 3300045049 Bacteria 10417
162 Ga0466959_0009931 3300045049 Bacteria 6787
163 Ga0466959_0297903 3300045049 Unclassified 1105
164 Ga0466958_0035700 3300045836 Bacteria 2970
165 Ga0495608_0495012 3300046511 Bacteria 741
166 Ga0495630_0447957 3300046517 Bacteria 989
167 Ga0495652_0509009 3300046529 Bacteria 834
168 Ga0495640_0122610 3300046533 Bacteria 1688
169 Ga0495658_0298480 3300046683 Bacteria 1019
170 Ga0495674_0013108 3300047319 Bacteria 7798
171 Ga0495674_0144352 3300047319 Bacteria 1999
172 Ga0495686_0088524 3300047472 Bacteria 1882
173 Ga0496100_0214186 3300048903 Bacteria 1411
174 Ga0496102_0503726 3300048905 Bacteria 1133
175 Ga0496103_0370293 3300048906 Unclassified 921
176 Ga0496104_0001397 3300048907 Bacteria 20891
177 Ga0496104_0023480 3300048907 Bacteria 5670
178 Ga0496104_0103701 3300048907 Unclassified 2725
179 Ga0496105_0034184 3300048908 Bacteria 4180
180 Ga0496105_0679129 3300048908 Bacteria 792
181 Ga0496106_0035827 3300048909 Bacteria 3711
182 Ga0496107_0061070 3300048910 Bacteria 2729
183 Ga0496108_0146804 3300048911 Bacteria 2034
184 Ga0496108_0185271 3300048911 Bacteria 1803
185 Ga0496108_0290301 3300048911 Bacteria 1424
186 Ga0496108_0509298 3300048911 Bacteria 1051
187 Ga0496109_0040726 3300048912 Bacteria 4208
188 Ga0496109_0066157 3300048912 Unclassified 3309
189 Ga0496109_0098823 3300048912 Bacteria 2706
190 Ga0496109_0271995 3300048912 Bacteria 1596
191 Ga0496110_0487095 3300048913 Bacteria 1123
192 Ga0496111_0172518 3300048914 Bacteria 1607
193 Ga0496112_0008393 3300048915 Bacteria 9253
194 Ga0496112_0011614 3300048915 Bacteria 8055
195 Ga0496112_0021781 3300048915 Bacteria 6098
196 Ga0496113_0022493 3300048916 Bacteria 4460
197 Ga0496113_0397150 3300048916 Bacteria 1107
198 Ga0496114_0416505 3300048917 Unclassified 1190
199 Ga0496115_0386747 3300048918 Unclassified 1137
200 Ga0496115_0586054 3300048918 Unclassified 888
201 Ga0501031_0210540 3300049568 Bacteria 1267
202 Ga0501032_0165835 3300049569 Bacteria 1449
203 Ga0501033_0145838 3300049570 Bacteria 1709
204 Ga0501036_0011166 3300049572 Bacteria 7430
205 Ga0501037_0255857 3300049573 Bacteria 1224
206 Ga0501038_0034095 3300049574 Bacteria 4477
207 Ga0501039_0199224 3300049575 Bacteria 1574
208 Ga0501042_0205001 3300049578 Bacteria 1422
209 Ga0501046_0056993 3300049580 Bacteria 3065
210 Ga0501067_0098118 3300049583 Bacteria 1627
211 Ga0501068_0156276 3300049584 Bacteria 1436
212 Ga0501070_0831477 3300049586 Bacteria 723
213 Ga0501071_0884518 3300049587 Bacteria 689
214 Ga0501073_0013020 3300049589 Bacteria 6065
215 Ga0501199_006657 3300049650 Bacteria 1181
216 Ga0501079_0078757 3300049741 Bacteria 2549
217 Ga0501035_0098037 3300049822 Bacteria 2573
218 nmdc:mga08y16_529401_c1 3300050511 Bacteria 1194
219 nmdc:mga08x19_15729_c1 3300050514 Bacteria 4603
220 Ga0495601_0082588 3300053077 Bacteria 2063
221 Ga0495619_0123292 3300053085 Bacteria 1777
222 Ga0501084_0039596 3300054114 Bacteria 3942
223 Ga0501082_0143889 3300060353 Bacteria 2069
224 Ga0466962_0016107 3300061719 Bacteria 3605
225 Ga0466962_0053687 3300061719 Bacteria 1926
226 Ga0466962_0090046 3300061719 Bacteria 1470
227 Ga0070683_100007020
228 JGI25407J50210_10011023
229 Ga0070683_100160839
230 Ga0070682_100175154
231 Ga0068868_100592005
232 Ga0070660_100369025
233 Ga0070691_10001746
234 Ga0070691_10229041
235 Ga0070687_100097196
236 Ga0070703_10065741
237 Ga0070714_100003354
238 Ga0070714_100370662
239 Ga0070714_100598978
240 Ga0070713_100000594
241 Ga0070700_100218221
242 Ga0070708_100002895
243 Ga0070708_100086936
244 Ga0070708_100136722
245 Ga0070663_100036722
246 Ga0070663_100400697
247 Ga0068867_100469038
248 Ga0070685_10141755
249 Ga0070706_100001987
250 Ga0070706_100008607
251 Ga0070706_100103539
252 Ga0070706_100493454
253 Ga0070707_100002336
254 Ga0070707_100012897
255 Ga0070698_100006028
256 Ga0070698_100392466
257 Ga0070698_100445240
258 Ga0070699_100003523
259 Ga0070699_100018813
260 Ga0070699_100371253
261 Ga0070679_100019459
262 Ga0070679_100264250
263 Ga0070684_100001232
264 Ga0070684_100030189
265 Ga0070697_100001405
266 Ga0070697_100097777
267 Ga0068853_100814994
268 Ga0070672_100435892
269 Ga0070672_100561230
270 Ga0070695_100383333
271 Ga0070665_100001104
272 Ga0068855_100485058
273 Ga0070664_100061810
274 Ga0068857_100000089
275 Ga0068857_100024796
276 Ga0068857_101195582
277 Ga0068854_100465205
278 Ga0068856_100000188
279 Ga0070702_100007122
280 Ga0068859_100160978
281 Ga0068864_100540847
282 Ga0068864_100695082
283 Ga0068866_10536148
284 Ga0068861_100057354
285 Ga0068860_100845499
286 Ga0081538_10026080
287 Ga0070717_10008088
288 Ga0070717_10051421
289 Ga0070717_10185912
290 Ga0075436_100019106
291 Ga0097620_100160964
292 Ga0099794_10001650
293 Ga0099794_10035726
294 Ga0099794_10154211
295 Ga0105245_10028318
296 Ga0105241_10525869
297 Ga0105237_10117293
298 Ga0105239_10770402
299 Ga0157370_10267469
300 Ga0157369_10000715
301 Ga0157374_10458624
302 Ga0157378_10353539
303 Ga0157372_10116027
304 Ga0157375_10873813
305 Ga0157375_10999025
306 Ga0163163_10171654
307 Ga0163163_11084734
308 Ga0157377_10014502
309 Ga0157379_10001943
310 Ga0213873_10019579
311 Ga0213872_10001758
312 Ga0213872_10003203
313 Ga0213872_10009532
314 Ga0213876_10016905
315 Ga0213876_10288735
316 Ga0213875_10031724
317 Ga0213871_10000150
318 Ga0224712_10116668
319 Ga0207653_10017974
320 Ga0207684_10003310
321 Ga0207684_10003563
322 Ga0207684_10028717
323 Ga0207684_10058174
324 Ga0207646_10003100
325 Ga0207646_10012967
326 Ga0207646_10033662
327 Ga0207700_10000598
328 Ga0207700_10521333
329 Ga0207664_10003263
330 Ga0207664_10423513
331 Ga0207690_10475654
332 Ga0207709_10052673
333 Ga0207709_10548503
334 Ga0207661_10000075
335 Ga0207661_10094569
336 Ga0207661_10378524
337 Ga0207679_10168638
338 Ga0207679_10440503
339 Ga0207678_10041905
340 Ga0207678_10539586
341 Ga0207708_10016092
342 Ga0207702_10002788
343 Ga0207648_10252846
344 Ga0207676_10206188
345 Ga0207674_10000028
346 Ga0207674_10033795
347 Ga0207675_100011232
348 Ga0207683_10413886
349 Ga0209588_1005741
350 Ga0268265_10406103
351 Ga0265340_10146341
352 Ga0307416_100136571
353 Ga0373954_0032351
354 Ga0373956_0001112
355 Ga0373927_0000006
356 Ga0373933_0003948
357 Ga0373933_0034769
358 Ga0373933_0236696
359 Ga0373937_0060493
360 Ga0373937_0172426
361 Ga0373937_0540759
362 Ga0373937_0817054
363 Ga0395900_0006708
364 Ga0395898_0002203
365 Ga0395898_0199431
366 Ga0395898_0236597
367 Ga0395898_0600887
368 Ga0436364_0675475
369 Ga0436364_1121514
370 Ga0436365_0184712
371 Ga0436365_1818479
372 Ga0436360_0639377
373 Ga0436361_0311924
374 Ga0436361_0465153
375 Ga0436363_0846772
376 Ga0436362_1260799
377 Ga0466969_0019497
378 Ga0466969_0033585
379 Ga0466969_0090820
380 Ga0466965_0001521
381 Ga0466966_0003235
382 Ga0466961_0011477
383 Ga0466971_0040787
384 Ga0466968_0003603
385 Ga0466957_0021172
386 Ga0466960_0002022
387 Ga0466959_0003386
388 Ga0466959_0009931
389 Ga0466959_0297903
390 Ga0466958_0035700
391 Ga0495608_0495012
392 Ga0495630_0447957
393 Ga0495652_0509009
394 Ga0495640_0122610
395 Ga0495658_0298480
396 Ga0495674_0013108
397 Ga0495674_0144352
398 Ga0495686_0088524
399 Ga0496100_0214186
400 Ga0496102_0503726
401 Ga0496103_0370293
402 Ga0496104_0001397
403 Ga0496104_0023480
404 Ga0496104_0103701
405 Ga0496105_0034184
406 Ga0496105_0679129
407 Ga0496106_0035827
408 Ga0496107_0061070
409 Ga0496108_0146804
410 Ga0496108_0185271
411 Ga0496108_0290301
412 Ga0496108_0509298
413 Ga0496109_0040726
414 Ga0496109_0066157
415 Ga0496109_0098823
416 Ga0496109_0271995
417 Ga0496110_0487095
418 Ga0496111_0172518
419 Ga0496112_0008393
420 Ga0496112_0011614
421 Ga0496112_0021781
422 Ga0496113_0022493
423 Ga0496113_0397150
424 Ga0496114_0416505
425 Ga0496115_0386747
426 Ga0496115_0586054
427 Ga0501031_0210540
428 Ga0501032_0165835
429 Ga0501033_0145838
430 Ga0501036_0011166
431 Ga0501037_0255857
432 Ga0501038_0034095
433 Ga0501039_0199224
434 Ga0501042_0205001
435 Ga0501046_0056993
436 Ga0501067_0098118
437 Ga0501068_0156276
438 Ga0501070_0831477
439 Ga0501071_0884518
440 Ga0501073_0013020
441 Ga0501199_006657
442 Ga0501079_0078757
443 Ga0501035_0098037
444 nmdc:mga08y16_529401_c1
445 nmdc:mga08x19_15729_c1
446 Ga0495601_0082588
447 Ga0495619_0123292
448 Ga0501084_0039596
449 Ga0501082_0143889
450 Ga0466962_0016107
451 Ga0466962_0053687
452 Ga0466962_0090046

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00753

Lactamase_B

Metallo-beta-lactamase superfamily

19

214

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ynu-assembly2.cif.gz_B apo gim-1 with 2mol. crystal structures of pseudomonas aeruginosa gim-1: active site plasticity in metallo-beta-lactamases 0.8237 13 220
6s0i-assembly1.cif.gz_A crystal structure of escherichia coli glyoxalase ii with l-tartrate in the active site 0.8096 3 202
7l0b-assembly4.cif.gz_D crystal structure of hydroxyacyl glutathione hydrolase (glob) from staphylococcus aureus, apoenzyme 0.8084 6 217
2ynt-assembly1.cif.gz_B-2 gim-1-3mol native. crystal structures of pseudomonas aeruginosa gim- 1: active site plasticity in metallo-beta-lactamases 0.8067 13 220
5acr-assembly1.cif.gz_B w228y-investigation of the impact from residues w228 and y233 in the metallo-beta-lactamase gim-1 0.8048 13 220
ID Description Score Start End Superfamily
2ynuB00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8237 13 220 3.60.15.10
af_I1MD49_73_326_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8105 3 202 3.60.15.10
5ev6B00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7974 13 220 3.60.15.10
3s0zB00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7812 13 219 3.60.15.10
af_Q58298_6_202_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7797 7 214 3.60.15.10
ID Description Score Start End GO Terms
AF-A0A6J4RR50-F1-model_v4 Uncharacterized protein YobT 0.9974 4 221
AF-A0A5J4KYL5-F1-model_v4 MBL fold metallo-hydrolase 0.9934 6 220 GO:0016787
AF-A0A402BCW0-F1-model_v4 MBL fold metallo-hydrolase 0.9931 6 220 GO:0016787
AF-A0A535RM88-F1-model_v4 MBL fold metallo-hydrolase 0.9917 6 220 GO:0016787
AF-A0A7X3GHS5-F1-model_v4 MBL fold metallo-hydrolase 0.9905 6 220 GO:0016787

Map