F338417

General Info

Members Datasets Scaffolds Average Seq Length
226 140 212 387

Family's Representative Sequence

Representative Sequence 3300003320|rootH2_10160056|rootH2_101600563
Length 450
Sequence MQGKAMSATRNYGSSCPVSAGRGMDAPRSGRIQGNRARRHRIPNLRRTAVLSYCFCCRVEIVKAFDSELKRRLDALREQDLLRELHRVDSPQSVRIRIGGKTLLNFSSNDYLGLANDPALKAAAILAVERFGAGAGASRLVCGSIAPFHELEEALADFKGTEAALTFSTGYAAAVGTITALMGRDDIIILDKLVHACIVDGAKLSGAKLRVFAHNDLDSLEDKLQWARRVLDSPGTSRTAPRTLIVTESIFSMDGDRAPLKEIVTLKEKYGAWLMVDEAHATGVCGRKGRGIADELGISRRIEVQMGTLGKALGSSGGYICGSRKLIDYLVNRARSFVFSTAPLVFQHSAAGDARRNTLWERVHQLGRQLSFKILPTSAIIPVTVGKEADALSTASQIQKRGLFVPAIRYPTVARGTARLRVTLTANHSRDDVQTLTEALRILHQASPTT

Samples

Sample ID Description Type Environment
1 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
2 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
3 2738541281 Methylobacterium sp. GV094 Isolate Unclassified
4 2738543032 Methylobacterium sp. GV104 Isolate Unclassified
5 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified
6 2829745981 Methylorubrum rhodinum DSM 2163 Isolate Rhizosphere
7 2842698319 Methylobacterium sp. R-72139 Isolate Unclassified
8 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
9 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
10 2902330777 Methylobacterium sp. 2A Isolate Unclassified
11 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
12 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
13 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
14 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
15 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
16 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
17 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
18 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
19 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
20 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
42 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
45 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
46 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
58 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
59 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
60 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
61 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
62 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
63 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
64 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
65 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
66 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
67 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
68 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
69 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
70 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
71 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
72 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
73 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
74 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
75 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
76 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
77 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
78 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
79 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
80 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
81 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
82 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
83 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
84 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
85 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
86 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
87 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
88 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
89 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
90 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
91 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
92 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
93 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
94 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
95 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
96 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
97 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
98 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
99 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
100 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
101 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
102 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
103 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
104 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
105 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
106 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
107 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
108 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
109 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
110 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
111 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
112 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
113 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
114 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
115 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
116 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
117 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
118 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
119 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
120 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
121 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
122 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
123 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
124 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
125 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
132 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
133 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
135 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
136 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
137 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
138 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
139 641522639 Methylobacterium sp. 4-46 Isolate Nodule
140 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 93.81
Metatranscriptomes 0
Isolates 6.19

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.77
Nodule 1.33
Rhizoplane 3.98
Rhizosphere 86.73
Stem 0
Stem Tuber 0
Unclassified 6.19

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10160056 3300003320 Bacteria 2591
2 rootH1_10366524 3300003323 Bacteria 2776
3 Ga0070658_10094029 3300005327 Bacteria 2473
4 Ga0070658_10261182 3300005327 Unclassified 1471
5 Ga0070680_100008642 3300005336 Bacteria 7807
6 Ga0070689_100010944 3300005340 Bacteria 6484
7 Ga0070687_100070957 3300005343 Bacteria 1870
8 Ga0070674_100018941 3300005356 Bacteria 4364
9 Ga0070711_100161071 3300005439 Bacteria 1701
10 Ga0070708_100024434 3300005445 Bacteria 5156
11 Ga0070708_100119053 3300005445 Bacteria 2434
12 Ga0070681_10005737 3300005458 Bacteria 12001
13 Ga0070706_100121210 3300005467 Bacteria 2438
14 Ga0070707_100130656 3300005468 Bacteria 2442
15 Ga0070698_100001419 3300005471 Bacteria 26523
16 Ga0070698_100013299 3300005471 Bacteria 8710
17 Ga0070698_100064348 3300005471 Bacteria 3695
18 Ga0070699_100009943 3300005518 Bacteria 8241
19 Ga0070679_100214750 3300005530 Bacteria 1886
20 Ga0070697_100006787 3300005536 Bacteria 8881
21 Ga0070697_100017252 3300005536 Bacteria 5676
22 Ga0068855_100048192 3300005563 Bacteria 5030
23 Ga0068855_100128331 3300005563 Unclassified 2898
24 Ga0068855_100147414 3300005563 Bacteria 2678
25 Ga0068856_100003498 3300005614 Bacteria 15861
26 Ga0068856_100209481 3300005614 Bacteria 1964
27 Ga0068859_100030586 3300005617 Bacteria 5404
28 Ga0068859_100033244 3300005617 Bacteria 5180
29 Ga0068858_100162923 3300005842 Bacteria 2100
30 Ga0081455_10002915 3300005937 Bacteria 20075
31 Ga0070717_10097692 3300006028 Bacteria 2488
32 Ga0075428_100005929 3300006844 Bacteria 13581
33 Ga0075428_100261364 3300006844 Unclassified 1864
34 Ga0097620_100030586 3300006931 Bacteria 5404
35 Ga0097620_100033244 3300006931 Bacteria 5180
36 Ga0099794_10011143 3300007265 Bacteria 3843
37 Ga0105240_10038130 3300009093 Bacteria 6168
38 Ga0105240_10041193 3300009093 Bacteria 5898
39 Ga0105240_10261029 3300009093 Unclassified 1998
40 Ga0105238_10014422 3300009551 Bacteria 7989
41 Ga0157369_10030626 3300013105 Bacteria 5933
42 Ga0157374_10021929 3300013296 Bacteria 5691
43 Ga0157378_10168738 3300013297 Eukaryota 2051
44 Ga0157372_10252497 3300013307 Bacteria 2047
45 Ga0213872_10004190 3300021361 Bacteria 7753
46 Ga0213872_10053952 3300021361 Bacteria 1823
47 Ga0213876_10002665 3300021384 Bacteria 10423
48 Ga0207653_10023285 3300025885 Bacteria 1972
49 Ga0207705_10112257 3300025909 Bacteria 2015
50 Ga0207707_10168233 3300025912 Bacteria 1915
51 Ga0207695_10071854 3300025913 Bacteria 3533
52 Ga0207660_10058100 3300025917 Bacteria 2772
53 Ga0207662_10089476 3300025918 Bacteria 1891
54 Ga0207646_10090503 3300025922 Bacteria 2739
55 Ga0207646_10191813 3300025922 Bacteria 1846
56 Ga0207664_10006091 3300025929 Bacteria 8258
57 Ga0207665_10110957 3300025939 Unclassified 1927
58 Ga0207702_10030207 3300026078 Bacteria 4515
59 Ga0207702_10072602 3300026078 Bacteria 2966
60 Ga0207641_10263803 3300026088 Unclassified 1614
61 Ga0265337_1000454 3300028556 Bacteria 21728
62 Ga0265337_1004520 3300028556 Bacteria 5755
63 Ga0265319_1000013 3300028563 Bacteria 180699
64 Ga0265319_1006945 3300028563 Bacteria 5162
65 Ga0265319_1008312 3300028563 Bacteria 4564
66 Ga0265319_1015274 3300028563 Bacteria 2983
67 Ga0265318_10011048 3300028577 Bacteria 3905
68 Ga0265318_10038755 3300028577 Bacteria 1821
69 Ga0265323_10000869 3300028653 Bacteria 16030
70 Ga0265323_10010127 3300028653 Bacteria 3827
71 Ga0265323_10011440 3300028653 Unclassified 3581
72 Ga0265322_10001887 3300028654 Bacteria 6645
73 Ga0265338_10000808 3300028800 Bacteria 52850
74 Ga0265338_10000831 3300028800 Bacteria 52074
75 Ga0265338_10002033 3300028800 Bacteria 31299
76 Ga0265338_10003998 3300028800 Bacteria 20271
77 Ga0265338_10004516 3300028800 Bacteria 18765
78 Ga0265338_10009464 3300028800 Bacteria 11611
79 Ga0265338_10010141 3300028800 Bacteria 11112
80 Ga0265338_10034728 3300028800 Bacteria 4866
81 Ga0265338_10038322 3300028800 Bacteria 4544
82 Ga0265338_10038906 3300028800 Bacteria 4497
83 Ga0265338_10041166 3300028800 Bacteria 4325
84 Ga0265338_10061431 3300028800 Bacteria 3293
85 Ga0265338_10073940 3300028800 Bacteria 2902
86 Ga0265338_10111604 3300028800 Unclassified 2200
87 Ga0265324_10004843 3300029957 Bacteria 5940
88 Ga0265324_10009244 3300029957 Bacteria 3856
89 Ga0265324_10020502 3300029957 Unclassified 2375
90 Ga0265324_10047933 3300029957 Bacteria 1469
91 Ga0265332_10016761 3300031238 Bacteria 3233
92 Ga0265332_10082074 3300031238 Unclassified 1367
93 Ga0265328_10057323 3300031239 Unclassified 1430
94 Ga0265320_10000580 3300031240 Bacteria 28151
95 Ga0265320_10003169 3300031240 Bacteria 11154
96 Ga0265320_10004916 3300031240 Bacteria 8669
97 Ga0265320_10010411 3300031240 Bacteria 5542
98 Ga0265325_10006560 3300031241 Bacteria 7055
99 Ga0265325_10025357 3300031241 Bacteria 3219
100 Ga0265329_10002074 3300031242 Bacteria 9329
101 Ga0265340_10013671 3300031247 Bacteria 4258
102 Ga0265340_10016405 3300031247 Bacteria 3836
103 Ga0265340_10038006 3300031247 Bacteria 2382
104 Ga0265339_10018137 3300031249 Unclassified 4154
105 Ga0265331_10016240 3300031250 Bacteria 3913
106 Ga0265327_10002086 3300031251 Bacteria 22280
107 Ga0265327_10054942 3300031251 Unclassified 2059
108 Ga0265316_10012209 3300031344 Bacteria 7709
109 Ga0265316_10080040 3300031344 Bacteria 2506
110 Ga0265316_10182521 3300031344 Unclassified 1562
111 Ga0265313_10001441 3300031595 Bacteria 22204
112 Ga0265313_10001577 3300031595 Bacteria 21137
113 Ga0265314_10000020 3300031711 Bacteria 307052
114 Ga0265314_10011374 3300031711 Bacteria 7354
115 Ga0265314_10032651 3300031711 Bacteria 3827
116 Ga0265342_10006042 3300031712 Bacteria 9086
117 Ga0265342_10038772 3300031712 Bacteria 2900
118 Ga0373926_0056624 3300035083 Bacteria 1423
119 Ga0373953_0030506 3300035117 Bacteria 2091
120 Ga0373954_0002445 3300035118 Bacteria 7784
121 Ga0373954_0073461 3300035118 Bacteria 1627
122 Ga0373956_0008384 3300035119 Bacteria 4182
123 Ga0373927_0122221 3300035695 Bacteria 1699
124 Ga0373937_0046667 3300036401 Bacteria 3962
125 Ga0373937_0125658 3300036401 Bacteria 2392
126 Ga0373925_0002241 3300037068 Bacteria 15664
127 Ga0436364_1115742 3300037853 Bacteria 2233
128 Ga0436364_1271699 3300037853 Bacteria 2068
129 Ga0436365_0474097 3300039437 Bacteria 24311
130 Ga0436360_1033351 3300039438 Unclassified 1980
131 Ga0436361_0199921 3300039447 Bacteria 29936
132 Ga0436361_0281970 3300039447 Unclassified 2059
133 Ga0436361_0979626 3300039447 Bacteria 6951
134 Ga0436362_0620736 3300039453 Bacteria 1210
135 Ga0436362_0808811 3300039453 Bacteria 6279
136 Ga0451798_0823686 3300041458 Bacteria 1405
137 Ga0439460_0011305 3300042461 Bacteria 2300
138 Ga0451577_0001408 3300042876 Bacteria 32132
139 Ga0451577_0014709 3300042876 Bacteria 7290
140 Ga0451577_0015995 3300042876 Bacteria 6961
141 Ga0451577_0101058 3300042876 Unclassified 2576
142 Ga0451577_0223815 3300042876 Bacteria 1701
143 Ga0466963_0087858 3300044694 Bacteria 2114
144 Ga0453684_0001072 3300044712 Bacteria 87117
145 Ga0453684_0038176 3300044712 Bacteria 6572
146 Ga0453684_0079893 3300044712 Bacteria 4087
147 Ga0453684_0365374 3300044712 Bacteria 1624
148 Ga0466957_0101810 3300044842 Bacteria 1811
149 Ga0451576_0011618 3300045051 Bacteria 9977
150 Ga0451576_0034572 3300045051 Bacteria 5367
151 Ga0451576_0059219 3300045051 Bacteria 3999
152 Ga0451576_0256754 3300045051 Bacteria 1827
153 Ga0451576_0311574 3300045051 Bacteria 1646
154 Ga0466967_0099046 3300045976 Bacteria 2662
155 Ga0495592_0046473 3300046454 Unclassified 3236
156 Ga0495629_0022439 3300046459 Bacteria 4501
157 Ga0495639_0103763 3300046475 Bacteria 1344
158 Ga0495618_0010068 3300046514 Bacteria 5716
159 Ga0495630_0000023 3300046517 Bacteria 172207
160 Ga0495630_0001837 3300046517 Bacteria 14818
161 Ga0495630_0024575 3300046517 Bacteria 4453
162 Ga0495666_0004242 3300046526 Bacteria 7231
163 Ga0495666_0019894 3300046526 Bacteria 3330
164 Ga0495652_0185055 3300046529 Bacteria 1595
165 Ga0495640_0066593 3300046533 Bacteria 2429
166 Ga0495640_0070732 3300046533 Bacteria 2343
167 Ga0495586_0000004 3300046535 Bacteria 180620
168 Ga0495586_0002210 3300046535 Bacteria 10568
169 Ga0495586_0037982 3300046535 Unclassified 2585
170 Ga0495587_0147366 3300046536 Bacteria 1342
171 Ga0495645_0051759 3300046543 Unclassified 2988
172 Ga0495622_0016551 3300046557 Unclassified 3435
173 Ga0495667_0032888 3300046559 Unclassified 3472
174 Ga0495634_0004121 3300046642 Bacteria 11511
175 Ga0495634_0056070 3300046642 Bacteria 2634
176 Ga0495647_0089987 3300046681 Bacteria 1257
177 Ga0495613_0015068 3300046689 Bacteria 5740
178 Ga0495613_0035567 3300046689 Bacteria 3696
179 Ga0495581_0108986 3300047315 Bacteria 1610
180 Ga0495674_0000508 3300047319 Bacteria 35681
181 Ga0495674_0288227 3300047319 Bacteria 1343
182 Ga0495676_0001340 3300047321 Bacteria 21150
183 Ga0495680_0003796 3300047322 Bacteria 14672
184 Ga0495680_0007298 3300047322 Bacteria 10171
185 Ga0495684_0047493 3300047471 Bacteria 3283
186 Ga0496100_0301168 3300048903 Bacteria 1200
187 Ga0496102_0368008 3300048905 Bacteria 1353
188 Ga0496104_0092416 3300048907 Bacteria 2893
189 Ga0496108_0319797 3300048911 Bacteria 1353
190 Ga0496112_0049604 3300048915 Bacteria 4115
191 Ga0496112_0260514 3300048915 Bacteria 1683
192 Ga0496113_0149778 3300048916 Bacteria 1840
193 Ga0496115_0079169 3300048918 Unclassified 2675
194 Ga0501031_0000127 3300049568 Bacteria 42244
195 Ga0501032_0007725 3300049569 Bacteria 7838
196 Ga0501033_0003955 3300049570 Bacteria 12015
197 Ga0501034_0278933 3300049571 Bacteria 1611
198 Ga0501036_0096544 3300049572 Bacteria 2499
199 Ga0501037_0051517 3300049573 Bacteria 3011
200 Ga0501227_021960 3300049665 Bacteria 1474
201 Ga0501080_0026651 3300049742 Bacteria 5370
202 Ga0501080_0030802 3300049742 Bacteria 4998
203 Ga0501080_0037557 3300049742 Bacteria 4524
204 Ga0501080_0132028 3300049742 Archaea 2312
205 Ga0501035_0007703 3300049822 Bacteria 10060
206 Ga0501044_0000116 3300049823 Bacteria 96626
207 Ga0501044_0000679 3300049823 Bacteria 41172
208 Ga0495619_0073582 3300053085 Bacteria 2290
209 Ga0500650_0037381 3300053098 Bacteria 2231
210 Ga0500568_0008206 3300053139 Bacteria 5058
211 Ga0500616_0003904 3300053153 Bacteria 10966
212 Ga0500616_0014136 3300053153 Bacteria 4599

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049571 Ga0501034_0278933 Ga0501034_0278933_51_1007 305
2 3300048903 Ga0496100_0301168 Ga0496100_0301168_74_1168 331
3 3300025913 Ga0207695_10071854 Ga0207695_100718542 345
4 3300046681 Ga0495647_0089987 Ga0495647_0089987_29_1171 345
5 3300047315 Ga0495581_0108986 Ga0495581_0108986_76_1218 345
6 3300005842 Ga0068858_100162923 Ga0068858_1001629232 346
7 3300005356 Ga0070674_100018941 Ga0070674_1000189412 349
8 3300005530 Ga0070679_100214750 Ga0070679_1002147502 349
9 3300013105 Ga0157369_10030626 Ga0157369_100306265 349
10 3300028800 Ga0265338_10003998 Ga0265338_1000399819 350
11 3300028800 Ga0265338_10034728 Ga0265338_100347284 350
12 3300028800 Ga0265338_10038906 Ga0265338_100389062 350
13 3300035083 Ga0373926_0056624 Ga0373926_0056624_11_1309 350
14 3300037068 Ga0373925_0002241 Ga0373925_0002241_5525_6823 350
15 3300046517 Ga0495630_0001837 Ga0495630_0001837_10623_11921 350
16 3300046526 Ga0495666_0019894 Ga0495666_0019894_982_2280 350
17 3300005617 Ga0068859_100030586 Ga0068859_1000305862 351
18 3300006931 Ga0097620_100030586 Ga0097620_1000305862 351
19 3300042461 Ga0439460_0011305 Ga0439460_0011305_341_1456 353
20 3300049568 Ga0501031_0000127 Ga0501031_0000127_23109_24293 353
21 3300049569 Ga0501032_0007725 Ga0501032_0007725_2348_3532 353
22 3300049570 Ga0501033_0003955 Ga0501033_0003955_5332_6516 353
23 3300049573 Ga0501037_0051517 Ga0501037_0051517_1590_2774 353
24 3300049822 Ga0501035_0007703 Ga0501035_0007703_1634_2818 353
25 3300049823 Ga0501044_0000679 Ga0501044_0000679_9145_10329 353
26 3300029957 Ga0265324_10004843 Ga0265324_100048435 354
27 3300005563 Ga0068855_100048192 Ga0068855_1000481925 355
28 3300005614 Ga0068856_100003498 Ga0068856_10000349812 355
29 3300026078 Ga0207702_10030207 Ga0207702_100302072 355
30 3300046535 Ga0495586_0037982 Ga0495586_0037982_376_1557 357
31 3300049742 Ga0501080_0037557 Ga0501080_0037557_2319_3431 357
32 iso_pu_bacteria 2902330777 2902336439 357
33 3300005563 Ga0068855_100147414 Ga0068855_1001474142 358
34 3300031247 Ga0265340_10013671 Ga0265340_100136712 358
35 3300049665 Ga0501227_021960 Ga0501227_021960_162_1334 358
36 iso_pu_bacteria 2595698237 2596373539 358
37 iso_pu_bacteria 2902405164 2902411664 358
38 iso_pu_bacteria 2928125067 2928128569 358
39 3300007265 Ga0099794_10011143 Ga0099794_100111432 359
40 3300025885 Ga0207653_10023285 Ga0207653_100232852 359
41 3300025922 Ga0207646_10090503 Ga0207646_100905032 359
42 iso_pu_bacteria 2829745981 2829748467 359
43 iso_pu_bacteria 2889306138 2889311484 359
44 3300028556 Ga0265337_1004520 Ga0265337_10045202 360
45 3300028800 Ga0265338_10004516 Ga0265338_100045167 362
46 iso_pu_bacteria 2545555834 2545674974 362
47 iso_pu_bacteria 641522639 641645302 362
48 iso_pu_bacteria 643348564 643603944 362
49 3300005327 Ga0070658_10094029 Ga0070658_100940293 363
50 3300005336 Ga0070680_100008642 Ga0070680_1000086427 363
51 3300006844 Ga0075428_100005929 Ga0075428_1000059292 363
52 3300021361 Ga0213872_10053952 Ga0213872_100539522 363
53 3300025917 Ga0207660_10058100 Ga0207660_100581003 363
54 3300031247 Ga0265340_10016405 Ga0265340_100164054 363
55 3300039447 Ga0436361_0979626 Ga0436361_0979626_425_1549 363
56 3300044694 Ga0466963_0087858 Ga0466963_0087858_565_1695 363
57 3300044842 Ga0466957_0101810 Ga0466957_0101810_237_1367 363
58 3300049823 Ga0501044_0000116 Ga0501044_0000116_73899_75029 363
59 3300005468 Ga0070707_100130656 Ga0070707_1001306562 364
60 3300009093 Ga0105240_10038130 Ga0105240_100381303 364
61 3300025922 Ga0207646_10191813 Ga0207646_101918132 364
62 3300037853 Ga0436364_1271699 Ga0436364_1271699_809_1963 364
63 3300046543 Ga0495645_0051759 Ga0495645_0051759_192_1400 364
64 3300047322 Ga0495680_0007298 Ga0495680_0007298_419_1546 364
65 3300049572 Ga0501036_0096544 Ga0501036_0096544_809_1984 364
66 3300005937 Ga0081455_10002915 Ga0081455_100029154 365
67 3300044712 Ga0453684_0365374 Ga0453684_0365374_209_1369 365
68 3300045051 Ga0451576_0256754 Ga0451576_0256754_22_1233 365
69 3300046454 Ga0495592_0046473 Ga0495592_0046473_1251_2462 365
70 3300046529 Ga0495652_0185055 Ga0495652_0185055_287_1498 365
71 3300046536 Ga0495587_0147366 Ga0495587_0147366_25_1236 365
72 3300047319 Ga0495674_0288227 Ga0495674_0288227_87_1298 365
73 3300003323 rootH1_10366524 rootH1_103665241 366
74 3300005439 Ga0070711_100161071 Ga0070711_1001610711 366
75 3300005445 Ga0070708_100024434 Ga0070708_1000244342 366
76 3300005458 Ga0070681_10005737 Ga0070681_100057372 366
77 3300005471 Ga0070698_100064348 Ga0070698_1000643482 366
78 3300005617 Ga0068859_100033244 Ga0068859_1000332444 366
79 3300006931 Ga0097620_100033244 Ga0097620_1000332444 366
80 3300031344 Ga0265316_10182521 Ga0265316_101825212 366
81 3300035118 Ga0373954_0073461 Ga0373954_0073461_284_1495 366
82 3300009093 Ga0105240_10041193 Ga0105240_100411935 367
83 3300031250 Ga0265331_10016240 Ga0265331_100162404 367
84 3300041458 Ga0451798_0823686 Ga0451798_0823686_117_1295 367
85 3300045051 Ga0451576_0059219 Ga0451576_0059219_850_2199 367
86 3300045976 Ga0466967_0099046 Ga0466967_0099046_965_2161 367
87 3300046517 Ga0495630_0024575 Ga0495630_0024575_34_1206 367
88 iso_pu_bacteria 2861691609 2861696289 367
89 3300013296 Ga0157374_10021929 Ga0157374_100219296 368
90 3300021361 Ga0213872_10004190 Ga0213872_100041904 368
91 3300025912 Ga0207707_10168233 Ga0207707_101682332 368
92 3300028800 Ga0265338_10061431 Ga0265338_100614312 368
93 3300029957 Ga0265324_10047933 Ga0265324_100479332 368
94 3300039438 Ga0436360_1033351 Ga0436360_1033351_216_1382 368
95 3300048905 Ga0496102_0368008 Ga0496102_0368008_70_1275 368
96 3300048907 Ga0496104_0092416 Ga0496104_0092416_1418_2623 368
97 3300048911 Ga0496108_0319797 Ga0496108_0319797_53_1258 368
98 3300048915 Ga0496112_0049604 Ga0496112_0049604_2490_3695 368
99 3300048915 Ga0496112_0260514 Ga0496112_0260514_54_1259 368
100 3300048916 Ga0496113_0149778 Ga0496113_0149778_582_1787 368
101 iso_pu_bacteria 2842698319 2842699813 368
102 3300005563 Ga0068855_100128331 Ga0068855_1001283312 369
103 3300006844 Ga0075428_100261364 Ga0075428_1002613641 369
104 3300009093 Ga0105240_10261029 Ga0105240_102610292 369
105 3300009551 Ga0105238_10014422 Ga0105238_100144227 369
106 3300013297 Ga0157378_10168738 Ga0157378_101687382 369
107 3300028800 Ga0265338_10041166 Ga0265338_100411663 369
108 3300029957 Ga0265324_10020502 Ga0265324_100205022 369
109 3300035117 Ga0373953_0030506 Ga0373953_0030506_777_1940 369
110 3300039447 Ga0436361_0199921 Ga0436361_0199921_20913_22082 369
111 3300039447 Ga0436361_0281970 Ga0436361_0281970_270_1439 369
112 3300039453 Ga0436362_0620736 Ga0436362_0620736_21_1190 369
113 3300039453 Ga0436362_0808811 Ga0436362_0808811_4569_5738 369
114 3300042876 Ga0451577_0001408 Ga0451577_0001408_11481_12656 369
115 3300046559 Ga0495667_0032888 Ga0495667_0032888_1012_2193 369
116 3300025909 Ga0207705_10112257 Ga0207705_101122572 370
117 3300028653 Ga0265323_10000869 Ga0265323_100008694 370
118 3300028654 Ga0265322_10001887 Ga0265322_100018877 370
119 3300045051 Ga0451576_0011618 Ga0451576_0011618_4643_5830 370
120 3300053098 Ga0500650_0037381 Ga0500650_0037381_359_1549 370
121 iso_pu_bacteria 2786546548 2787509759 370
122 3300005340 Ga0070689_100010944 Ga0070689_1000109445 371
123 3300005471 Ga0070698_100001419 Ga0070698_10000141914 371
124 3300025929 Ga0207664_10006091 Ga0207664_100060914 371
125 3300028563 Ga0265319_1008312 Ga0265319_10083122 371
126 3300028577 Ga0265318_10038755 Ga0265318_100387552 371
127 3300028653 Ga0265323_10010127 Ga0265323_100101272 371
128 3300028653 Ga0265323_10011440 Ga0265323_100114402 371
129 3300028800 Ga0265338_10000831 Ga0265338_100008314 371
130 3300028800 Ga0265338_10009464 Ga0265338_1000946413 371
131 3300028800 Ga0265338_10111604 Ga0265338_101116042 371
132 3300029957 Ga0265324_10009244 Ga0265324_100092443 371
133 3300031238 Ga0265332_10082074 Ga0265332_100820741 371
134 3300031241 Ga0265325_10006560 Ga0265325_100065603 371
135 3300031241 Ga0265325_10025357 Ga0265325_100253572 371
136 3300031249 Ga0265339_10018137 Ga0265339_100181372 371
137 3300031344 Ga0265316_10012209 Ga0265316_100122092 371
138 3300031595 Ga0265313_10001577 Ga0265313_100015779 371
139 3300031711 Ga0265314_10011374 Ga0265314_100113745 371
140 3300031712 Ga0265342_10006042 Ga0265342_100060429 371
141 3300042876 Ga0451577_0014709 Ga0451577_0014709_3499_4683 371
142 3300005614 Ga0068856_100209481 Ga0068856_1002094812 372
143 3300013307 Ga0157372_10252497 Ga0157372_102524972 372
144 3300026078 Ga0207702_10072602 Ga0207702_100726022 372
145 3300028800 Ga0265338_10000808 Ga0265338_1000080814 372
146 3300028800 Ga0265338_10002033 Ga0265338_100020339 372
147 3300028800 Ga0265338_10038322 Ga0265338_100383222 372
148 3300005536 Ga0070697_100006787 Ga0070697_1000067872 373
149 3300028563 Ga0265319_1000013 Ga0265319_1000013150 373
150 3300028563 Ga0265319_1015274 Ga0265319_10152742 373
151 3300028577 Ga0265318_10011048 Ga0265318_100110485 373
152 3300028800 Ga0265338_10073940 Ga0265338_100739402 373
153 3300031240 Ga0265320_10010411 Ga0265320_100104112 373
154 3300031247 Ga0265340_10038006 Ga0265340_100380062 373
155 3300031595 Ga0265313_10001441 Ga0265313_1000144111 373
156 3300036401 Ga0373937_0046667 Ga0373937_0046667_684_1844 373
157 3300046557 Ga0495622_0016551 Ga0495622_0016551_631_1818 373
158 3300049742 Ga0501080_0132028 Ga0501080_0132028_939_2144 373
159 3300053085 Ga0495619_0073582 Ga0495619_0073582_613_1773 373
160 3300031239 Ga0265328_10057323 Ga0265328_100573231 374
161 3300031242 Ga0265329_10002074 Ga0265329_100020743 374
162 3300031344 Ga0265316_10080040 Ga0265316_100800402 374
163 3300031711 Ga0265314_10000020 Ga0265314_1000002059 374
164 3300048918 Ga0496115_0079169 Ga0496115_0079169_877_2064 374
165 3300053153 Ga0500616_0014136 Ga0500616_0014136_1185_2369 374
166 3300031240 Ga0265320_10004916 Ga0265320_100049162 375
167 3300031238 Ga0265332_10016761 Ga0265332_100167612 376
168 3300031240 Ga0265320_10000580 Ga0265320_1000058019 376
169 3300031711 Ga0265314_10032651 Ga0265314_100326514 376
170 3300031712 Ga0265342_10038772 Ga0265342_100387722 376
171 3300035118 Ga0373954_0002445 Ga0373954_0002445_4170_5411 376
172 3300035119 Ga0373956_0008384 Ga0373956_0008384_2201_3442 376
173 3300036401 Ga0373937_0125658 Ga0373937_0125658_590_1831 376
174 3300046459 Ga0495629_0022439 Ga0495629_0022439_1130_2371 376
175 3300046514 Ga0495618_0010068 Ga0495618_0010068_3885_5126 376
176 3300046533 Ga0495640_0066593 Ga0495640_0066593_570_1805 376
177 3300046533 Ga0495640_0070732 Ga0495640_0070732_552_1793 376
178 3300046535 Ga0495586_0002210 Ga0495586_0002210_2064_3305 376
179 3300046642 Ga0495634_0004121 Ga0495634_0004121_5742_6983 376
180 3300046642 Ga0495634_0056070 Ga0495634_0056070_266_1501 376
181 3300046689 Ga0495613_0015068 Ga0495613_0015068_547_1788 376
182 3300047322 Ga0495680_0003796 Ga0495680_0003796_11994_13235 376
183 3300047471 Ga0495684_0047493 Ga0495684_0047493_640_1881 376
184 iso_pu_bacteria 2738541281 2738744973 376
185 iso_pu_bacteria 2738543032 2739354203 376
186 3300042876 Ga0451577_0101058 Ga0451577_0101058_871_2076 377
187 3300044712 Ga0453684_0038176 Ga0453684_0038176_3139_4356 377
188 3300044712 Ga0453684_0079893 Ga0453684_0079893_2797_4002 377
189 3300049742 Ga0501080_0026651 Ga0501080_0026651_500_1684 377
190 3300028556 Ga0265337_1000454 Ga0265337_100045414 378
191 3300035695 Ga0373927_0122221 Ga0373927_0122221_155_1357 378
192 3300005445 Ga0070708_100119053 Ga0070708_1001190533 379
193 3300005467 Ga0070706_100121210 Ga0070706_1001212102 379
194 3300005471 Ga0070698_100013299 Ga0070698_1000132994 379
195 3300005518 Ga0070699_100009943 Ga0070699_1000099437 379
196 3300005536 Ga0070697_100017252 Ga0070697_1000172521 379
197 3300006028 Ga0070717_10097692 Ga0070717_100976922 379
198 3300042876 Ga0451577_0223815 Ga0451577_0223815_11_1219 379
199 3300005327 Ga0070658_10261182 Ga0070658_102611821 380
200 3300021384 Ga0213876_10002665 Ga0213876_100026651 380
201 3300039437 Ga0436365_0474097 Ga0436365_0474097_15278_16498 380
202 3300005343 Ga0070687_100070957 Ga0070687_1000709572 381
203 3300025918 Ga0207662_10089476 Ga0207662_100894762 381
204 3300026088 Ga0207641_10263803 Ga0207641_102638031 382
205 3300028563 Ga0265319_1006945 Ga0265319_10069452 382
206 3300028800 Ga0265338_10010141 Ga0265338_100101412 382
207 3300031240 Ga0265320_10003169 Ga0265320_100031695 382
208 3300031251 Ga0265327_10002086 Ga0265327_1000208614 382
209 3300031251 Ga0265327_10054942 Ga0265327_100549422 382
210 3300046475 Ga0495639_0103763 Ga0495639_0103763_59_1312 382
211 3300046517 Ga0495630_0000023 Ga0495630_0000023_94426_95679 382
212 3300046526 Ga0495666_0004242 Ga0495666_0004242_417_1670 382
213 3300046535 Ga0495586_0000004 Ga0495586_0000004_84940_86193 382
214 3300046689 Ga0495613_0035567 Ga0495613_0035567_2019_3272 382
215 3300047319 Ga0495674_0000508 Ga0495674_0000508_19293_20546 382
216 3300047321 Ga0495676_0001340 Ga0495676_0001340_10291_11544 382
217 3300049742 Ga0501080_0030802 Ga0501080_0030802_1823_3049 382
218 3300053153 Ga0500616_0003904 Ga0500616_0003904_2450_3685 382
219 3300025939 Ga0207665_10110957 Ga0207665_101109572 383
220 3300053139 Ga0500568_0008206 Ga0500568_0008206_2789_4018 384
221 3300037853 Ga0436364_1115742 Ga0436364_1115742_120_1361 385
222 3300045051 Ga0451576_0034572 Ga0451576_0034572_2570_3856 396
223 3300042876 Ga0451577_0015995 Ga0451577_0015995_1167_2483 403
224 3300044712 Ga0453684_0001072 Ga0453684_0001072_83089_84405 403
225 3300045051 Ga0451576_0311574 Ga0451576_0311574_287_1585 404
226 3300003320 rootH2_10160056 rootH2_101600563 450

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00155

Aminotran_1_2

Aminotransferase class I and II

101

440

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
7v5i-assembly1.cif.gz_B structural insights into the substrate selectivity of acyl-coa transferase 0.6783 61 446
1fc4-assembly1.cif.gz_B 2-amino-3-ketobutyrate coa ligase 0.6768 61 446
7k0m-assembly1.cif.gz_A human serine palmitoyltransferase complex sptlc1/spltc2/ssspta/ormdl3, class 1 0.6757 84 446
7bxp-assembly1.cif.gz_B 2-amino-3-ketobutyrate coa ligase from cupriavidus necator 0.6704 62 446
6m4n-assembly1.cif.gz_E cryo-em structure of the dimeric spt-ormdl3 complex 0.6695 84 446
ID Description Score Start End Superfamily
af_I1JW06_395_456_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9777 378 438 3.90.1150.10
af_Q8ILT9_206_445_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.974 111 334 3.40.640.10
af_Q8GW43_379_454_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9629 363 438 3.90.1150.10
3a2bA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9567 117 340 3.40.640.10
af_Q2G0M8_60_294_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9482 121 341 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A383ER01-F1-model_v4 Aminotransferase class I/classII large domain-containing protein 0.9758 65 299 GO:0008710
GO:0009102
GO:0030170
AF-A0A7Z2QE39-F1-model_v4 deleted 0.9707 69 289
AF-A0A2M7C2M5-F1-model_v4 8-amino-7-oxononanoate synthase 0.9656 67 280 GO:0008710
GO:0009102
GO:0030170
AF-X1PAA2-F1-model_v4 Aminotransferase class I/classII large domain-containing protein 0.9651 89 292 GO:0009058
GO:0030170
AF-U3U121-F1-model_v4 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) 0.9647 136 295 GO:0005829
GO:0008890
GO:0009058
GO:0016874
GO:0030170

Feature Viewer

pLDDT pTM Quality
80.04 0.72 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map