F338027

General Info

Members Datasets Scaffolds Average Seq Length
225 173 450 246

Family's Representative Sequence

Representative Sequence 3300041406|Ga0439439_0073937|Ga0439439_0073937_62_901
Length 279
Sequence LPGEIYLESADVCSAEGRSGRSGTLHVVVASENVSYLAALGGGVVSFLSPCVLPIVPAYLSVITGLDVAEVKEGDRRHLPRIAWHTGLFIAGFSLVFVLLGLAATSLGRTLLRNQAAITRWSGVLIVAMALYMLGSLVLRAPGLYKEKRWHPNLARFGPFAAPVAGIAFGFGWTPCIGPVLSAVLGKAATEGEATQGALLLLFYSAGLGIPFMAAGLAFGRLAGALDWVKRHSTAITATSALALGFFGVLLTLNKFTWLTVKLQGGLDAVGLDRLITLG

Samples

Sample ID Description Type Environment
1 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
41 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
42 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
43 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
44 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
45 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
46 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
47 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
48 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
49 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
50 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
51 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
58 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
60 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
61 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
62 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
63 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
64 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
65 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
96 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
97 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
101 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
102 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
103 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
104 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
105 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
106 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
107 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
108 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
109 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
110 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
111 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
112 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
113 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
114 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
115 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
116 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
117 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
118 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
119 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
120 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
121 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
122 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
123 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
124 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
125 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
126 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
127 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
128 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
129 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
130 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
131 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
132 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
133 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
134 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
135 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
136 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
137 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
138 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
139 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
140 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
141 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
142 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
143 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
144 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
145 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
151 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
152 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
153 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
154 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
155 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
156 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
157 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
158 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
159 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
160 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
161 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
162 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
163 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
164 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
165 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
166 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
167 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
168 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
169 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
170 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
171 2690316117 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
172 2847417321 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
173 2960617483 Sinorhizobium meliloti USDA1719 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 98.22
Metatranscriptomes 0.44
Isolates 1.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.44
Nodule 0.44
Rhizoplane 5.33
Rhizosphere 83.11
Stem 0
Stem Tuber 0
Unclassified 4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0439439_0073937 3300041406 Bacteria 915
2 Ga0065704_10109773 3300005289 Bacteria 1996
3 Ga0070690_100013484 3300005330 Bacteria 4831
4 Ga0068869_100044860 3300005334 Bacteria 3180
5 Ga0070666_10100397 3300005335 Bacteria 1994
6 Ga0068868_100056220 3300005338 Bacteria 3107
7 Ga0070660_100456668 3300005339 Bacteria 1060
8 Ga0070689_100030968 3300005340 Bacteria 4063
9 Ga0070689_100209279 3300005340 Bacteria 1595
10 Ga0070687_100001658 3300005343 Bacteria 7972
11 Ga0070687_100135003 3300005343 Bacteria 1429
12 Ga0070668_100249985 3300005347 Bacteria 1471
13 Ga0070669_100035223 3300005353 Bacteria 3626
14 Ga0070675_100010949 3300005354 Bacteria 7097
15 Ga0070674_100010275 3300005356 Bacteria 5650
16 Ga0070703_10075817 3300005406 Bacteria 1134
17 Ga0070703_10151223 3300005406 Bacteria 872
18 Ga0070711_100450899 3300005439 Bacteria 1053
19 Ga0070705_100130386 3300005440 Bacteria 1639
20 Ga0070678_100346217 3300005456 Bacteria 1276
21 Ga0070662_100018757 3300005457 Bacteria 4684
22 Ga0070681_10023732 3300005458 Bacteria 6173
23 Ga0070681_10037238 3300005458 Bacteria 4883
24 Ga0070685_10023376 3300005466 Bacteria 3384
25 Ga0070706_100011208 3300005467 Bacteria 8325
26 Ga0070706_100072550 3300005467 Bacteria 3186
27 Ga0070706_100090624 3300005467 Bacteria 2836
28 Ga0070706_100147270 3300005467 Bacteria 2199
29 Ga0070706_100242595 3300005467 Bacteria 1682
30 Ga0070698_100029590 3300005471 Bacteria 5687
31 Ga0070698_100076397 3300005471 Bacteria 3351
32 Ga0070698_100081855 3300005471 Bacteria 3221
33 Ga0070698_100112356 3300005471 Bacteria 2689
34 Ga0070699_100074938 3300005518 Bacteria 2945
35 Ga0070697_100668864 3300005536 Bacteria 915
36 Ga0070686_100047823 3300005544 Bacteria 2707
37 Ga0070695_100018909 3300005545 Bacteria 4189
38 Ga0070696_100061487 3300005546 Bacteria 2627
39 Ga0070696_100464622 3300005546 Bacteria 1001
40 Ga0070665_100046279 3300005548 Bacteria 4371
41 Ga0070704_100032415 3300005549 Bacteria 3524
42 Ga0068855_100076448 3300005563 Bacteria 3886
43 Ga0068857_100128736 3300005577 Bacteria 2282
44 Ga0068859_100017133 3300005617 Bacteria 7276
45 Ga0068864_100071710 3300005618 Bacteria 3017
46 Ga0068866_10045978 3300005718 Bacteria 2193
47 Ga0068861_100021696 3300005719 Bacteria 4617
48 Ga0068863_100036281 3300005841 Bacteria 4697
49 Ga0068858_100004044 3300005842 Bacteria 14461
50 Ga0068860_100040091 3300005843 Bacteria 4478
51 Ga0068862_100352187 3300005844 Bacteria 1366
52 Ga0075365_10015588 3300006038 Bacteria 4601
53 Ga0075368_10014146 3300006042 Bacteria 2943
54 Ga0075363_100101607 3300006048 Bacteria 1592
55 Ga0075364_10077388 3300006051 Bacteria 2196
56 Ga0075362_10132079 3300006177 Bacteria 1188
57 Ga0075367_10016164 3300006178 Bacteria 4072
58 Ga0075367_10024866 3300006178 Bacteria 3380
59 Ga0075366_10004338 3300006195 Bacteria 7603
60 Ga0075366_10012773 3300006195 Bacteria 4772
61 Ga0075370_10037260 3300006353 Bacteria 2734
62 Ga0075370_10049825 3300006353 Bacteria 2375
63 Ga0075428_100018071 3300006844 Bacteria 7792
64 Ga0075430_100000389 3300006846 Bacteria 32344
65 Ga0075430_100284603 3300006846 Bacteria 1368
66 Ga0075431_100018075 3300006847 Bacteria 7171
67 Ga0075431_100022922 3300006847 Bacteria 6382
68 Ga0075431_100042437 3300006847 Bacteria 4692
69 Ga0075431_100077260 3300006847 Bacteria 3437
70 Ga0075433_10016569 3300006852 Bacteria 6080
71 Ga0075429_100036794 3300006880 Bacteria 4259
72 Ga0068865_100001551 3300006881 Bacteria 13413
73 Ga0097620_100017133 3300006931 Bacteria 7276
74 Ga0105240_10126470 3300009093 Bacteria 3071
75 Ga0111539_10000234 3300009094 Bacteria 66163
76 Ga0111539_10046200 3300009094 Bacteria 5209
77 Ga0105245_10005278 3300009098 Bacteria 11349
78 Ga0105245_10090780 3300009098 Bacteria 2810
79 Ga0114129_10012763 3300009147 Bacteria 11958
80 Ga0114129_10195042 3300009147 Bacteria 2747
81 Ga0114129_11136649 3300009147 Unclassified 976
82 Ga0105243_10012441 3300009148 Bacteria 6433
83 Ga0105243_10306248 3300009148 Bacteria 1442
84 Ga0105242_10022587 3300009176 Bacteria 4950
85 Ga0105248_10048868 3300009177 Bacteria 4745
86 Ga0105249_10086086 3300009553 Bacteria 2930
87 Ga0157370_10676942 3300013104 Bacteria 942
88 Ga0157378_10095149 3300013297 Bacteria 2712
89 Ga0163162_11050950 3300013306 Bacteria 922
90 Ga0157375_10041721 3300013308 Bacteria 4433
91 Ga0207642_10029211 3300025899 Bacteria 2281
92 Ga0207680_10059831 3300025903 Bacteria 2316
93 Ga0207643_10172731 3300025908 Bacteria 1305
94 Ga0207684_10004931 3300025910 Bacteria 12451
95 Ga0207684_10060906 3300025910 Bacteria 3206
96 Ga0207684_10228280 3300025910 Bacteria 1606
97 Ga0207684_10271937 3300025910 Bacteria 1462
98 Ga0207707_10037843 3300025912 Bacteria 4215
99 Ga0207707_10070023 3300025912 Bacteria 3057
100 Ga0207707_10222737 3300025912 Bacteria 1642
101 Ga0207663_10228674 3300025916 Bacteria 1358
102 Ga0207662_10001018 3300025918 Bacteria 13129
103 Ga0207646_10153079 3300025922 Bacteria 2080
104 Ga0207681_10129017 3300025923 Bacteria 1867
105 Ga0207659_10032308 3300025926 Bacteria 3591
106 Ga0207687_10052476 3300025927 Bacteria 2846
107 Ga0207687_10066303 3300025927 Bacteria 2566
108 Ga0207664_10178021 3300025929 Bacteria 1824
109 Ga0207706_10043507 3300025933 Bacteria 3979
110 Ga0207686_10062500 3300025934 Bacteria 2365
111 Ga0207709_10019177 3300025935 Bacteria 3841
112 Ga0207669_10198437 3300025937 Bacteria 1454
113 Ga0207704_10018478 3300025938 Bacteria 3640
114 Ga0207689_10007753 3300025942 Bacteria 9396
115 Ga0207661_10400051 3300025944 Bacteria 1245
116 Ga0207667_10066045 3300025949 Bacteria 3772
117 Ga0207712_10034652 3300025961 Bacteria 3422
118 Ga0207668_10048649 3300025972 Bacteria 2911
119 Ga0207677_10055362 3300026023 Bacteria 2712
120 Ga0207703_10010359 3300026035 Bacteria 7295
121 Ga0207678_10004248 3300026067 Bacteria 12850
122 Ga0207641_10026125 3300026088 Bacteria 4818
123 Ga0207648_10013945 3300026089 Bacteria 7450
124 Ga0207683_10054877 3300026121 Bacteria 3494
125 Ga0209813_10014384 3300027866 Bacteria 2130
126 Ga0207428_10000079 3300027907 Bacteria 136472
127 Ga0268266_10068333 3300028379 Bacteria 3077
128 Ga0268265_10102248 3300028380 Bacteria 2317
129 Ga0268265_10122159 3300028380 Bacteria 2147
130 Ga0268264_10017194 3300028381 Bacteria 5923
131 Ga0265318_10083332 3300028577 Bacteria 1180
132 Ga0316575_10093093 3300031665 Bacteria 1222
133 Ga0316576_10033611 3300031727 Bacteria 3652
134 Ga0316577_10126652 3300031733 Bacteria 1436
135 Ga0307409_100166732 3300031995 Bacteria 1934
136 Ga0307416_100517441 3300032002 Bacteria 1261
137 Ga0316585_10008942 3300032137 Bacteria 2910
138 Ga0316596_1010489 3300033541 Bacteria 2243
139 Ga0373954_0005432 3300035118 Bacteria 5513
140 Ga0373933_0017138 3300035724 Bacteria 4061
141 Ga0373937_0422589 3300036401 Bacteria 1265
142 Ga0316582_0031119 3300036647 Bacteria 3258
143 Ga0316584_0010667 3300036712 Bacteria 6432
144 Ga0395901_0023564 3300038443 Bacteria 6312
145 Ga0400491_23878 3300038727 Bacteria 18536
146 Ga0400485_06186 3300038735 Bacteria 14251
147 Ga0400488_55056 3300038741 Bacteria 5012
148 Ga0400486_02662 3300038742 Bacteria 74467
149 Ga0439466_0067671 3300041411 Bacteria 1142
150 Ga0439431_0013059 3300041997 Bacteria 1914
151 Ga0439452_028213 3300042010 Bacteria 1403
152 Ga0439434_0035257 3300042435 Bacteria 1529
153 Ga0466957_0238068 3300044842 Bacteria 1207
154 Ga0466959_0215791 3300045049 Bacteria 1332
155 Ga0466959_0442248 3300045049 Bacteria 882
156 Ga0451576_0377736 3300045051 Bacteria 1485
157 Ga0495638_0000931 3300046460 Bacteria 29693
158 Ga0495580_0300682 3300046472 Bacteria 1093
159 Ga0495584_0096402 3300046491 Bacteria 1494
160 Ga0495628_0060503 3300046516 Bacteria 2972
161 Ga0495628_0063112 3300046516 Bacteria 2903
162 Ga0495630_0002418 3300046517 Bacteria 12944
163 Ga0495630_0050919 3300046517 Bacteria 3099
164 Ga0495640_0007465 3300046533 Bacteria 8589
165 Ga0495586_0000260 3300046535 Bacteria 34560
166 Ga0495645_0194688 3300046543 Bacteria 1379
167 Ga0495656_0052315 3300046615 Bacteria 1751
168 Ga0495600_0006489 3300046809 Bacteria 7120
169 Ga0495674_0042511 3300047319 Bacteria 4053
170 Ga0495680_0018682 3300047322 Bacteria 5875
171 Ga0495684_0013345 3300047471 Bacteria 6326
172 Ga0496104_0124696 3300048907 Bacteria 2473
173 Ga0496106_0320977 3300048909 Unclassified 1243
174 Ga0496109_0020368 3300048912 Bacteria 5858
175 Ga0496109_0431784 3300048912 Bacteria 1244
176 Ga0496109_0586132 3300048912 Unclassified 1051
177 Ga0496111_0088928 3300048914 Unclassified 2262
178 Ga0496112_0005471 3300048915 Bacteria 10994
179 Ga0496112_0007202 3300048915 Bacteria 9855
180 Ga0496112_0105696 3300048915 Bacteria 2785
181 Ga0496112_0453703 3300048915 Bacteria 1220
182 Ga0496113_0134860 3300048916 Unclassified 1939
183 Ga0496115_0289751 3300048918 Unclassified 1343
184 Ga0501032_0070616 3300049569 Bacteria 2329
185 Ga0501034_0060473 3300049571 Bacteria 3805
186 Ga0501036_0686962 3300049572 Bacteria 846
187 Ga0501039_0302637 3300049575 Bacteria 1257
188 Ga0501047_0049001 3300049581 Bacteria 4079
189 Ga0501068_0111164 3300049584 Bacteria 1704
190 Ga0501071_0086664 3300049587 Bacteria 2297
191 Ga0501073_0193709 3300049589 Bacteria 1406
192 Ga0501075_0169494 3300049591 Bacteria 1666
193 Ga0501075_0428878 3300049591 Bacteria 1008
194 Ga0501077_0202818 3300049593 Bacteria 1260
195 Ga0501080_0098406 3300049742 Bacteria 2715
196 Ga0501081_0426654 3300049743 Bacteria 983
197 nmdc:mga00v17_212260_c1 3300050491 Bacteria 1253
198 nmdc:mga0yw44_200804_c1 3300050492 Bacteria 1317
199 nmdc:mga0k408_11706_c1 3300050493 Bacteria 4783
200 nmdc:mga0k408_8733_c1 3300050493 Bacteria 5451
201 nmdc:mga06z11_8434_c1 3300050494 Bacteria 4296
202 nmdc:mga07m45_71588_c1 3300050496 Bacteria 1972
203 nmdc:mga07m45_78766_c1 3300050496 Unclassified 1880
204 nmdc:mga05p37_169380_c1 3300050507 Bacteria 2664
205 nmdc:mga05p37_45032_c1 3300050507 Bacteria 5428
206 nmdc:mga05p37_754109_c1 3300050507 Bacteria 1072
207 nmdc:mga05p37_870253_c1 3300050507 Unclassified 976
208 nmdc:mga05p37_93735_c1 3300050507 Bacteria 3700
209 nmdc:mga0qj67_16771_c1 3300050509 Bacteria 5563
210 nmdc:mga0qj67_419801_c1 3300050509 Bacteria 1078
211 nmdc:mga06r32_170795_c1 3300050510 Bacteria 2158
212 nmdc:mga06r32_44801_c1 3300050510 Bacteria 4215
213 nmdc:mga06r32_5621_c1 3300050510 Bacteria 11275
214 nmdc:mga08y16_61158_c1 3300050511 Bacteria 3933
215 nmdc:mga08y16_71575_c1 3300050511 Bacteria 3613
216 nmdc:mga0n895_229042_c1 3300050512 Bacteria 1886
217 nmdc:mga0rr50_132114_c1 3300050513 Bacteria 2000
218 nmdc:mga0a205_120557_c1 3300050515 Bacteria 2522
219 nmdc:mga0a205_80282_c1 3300050515 Unclassified 3152
220 Ga0501084_0077029 3300054114 Bacteria 2796
221 Ga0501084_0261556 3300054114 Bacteria 1461
222 Ga0530510_0382538 3300061734 Bacteria 1059
223 2692314684 2690316117 Bacteria 6800650
224 2847420263 2847417321 Bacteria 6913799
225 2960621316 2960617483 Bacteria 6727748
226 Ga0439439_0073937
227 Ga0065704_10109773
228 Ga0070690_100013484
229 Ga0068869_100044860
230 Ga0070666_10100397
231 Ga0068868_100056220
232 Ga0070660_100456668
233 Ga0070689_100030968
234 Ga0070689_100209279
235 Ga0070687_100001658
236 Ga0070687_100135003
237 Ga0070668_100249985
238 Ga0070669_100035223
239 Ga0070675_100010949
240 Ga0070674_100010275
241 Ga0070703_10075817
242 Ga0070703_10151223
243 Ga0070711_100450899
244 Ga0070705_100130386
245 Ga0070678_100346217
246 Ga0070662_100018757
247 Ga0070681_10023732
248 Ga0070681_10037238
249 Ga0070685_10023376
250 Ga0070706_100011208
251 Ga0070706_100072550
252 Ga0070706_100090624
253 Ga0070706_100147270
254 Ga0070706_100242595
255 Ga0070698_100029590
256 Ga0070698_100076397
257 Ga0070698_100081855
258 Ga0070698_100112356
259 Ga0070699_100074938
260 Ga0070697_100668864
261 Ga0070686_100047823
262 Ga0070695_100018909
263 Ga0070696_100061487
264 Ga0070696_100464622
265 Ga0070665_100046279
266 Ga0070704_100032415
267 Ga0068855_100076448
268 Ga0068857_100128736
269 Ga0068859_100017133
270 Ga0068864_100071710
271 Ga0068866_10045978
272 Ga0068861_100021696
273 Ga0068863_100036281
274 Ga0068858_100004044
275 Ga0068860_100040091
276 Ga0068862_100352187
277 Ga0075365_10015588
278 Ga0075368_10014146
279 Ga0075363_100101607
280 Ga0075364_10077388
281 Ga0075362_10132079
282 Ga0075367_10016164
283 Ga0075367_10024866
284 Ga0075366_10004338
285 Ga0075366_10012773
286 Ga0075370_10037260
287 Ga0075370_10049825
288 Ga0075428_100018071
289 Ga0075430_100000389
290 Ga0075430_100284603
291 Ga0075431_100018075
292 Ga0075431_100022922
293 Ga0075431_100042437
294 Ga0075431_100077260
295 Ga0075433_10016569
296 Ga0075429_100036794
297 Ga0068865_100001551
298 Ga0097620_100017133
299 Ga0105240_10126470
300 Ga0111539_10000234
301 Ga0111539_10046200
302 Ga0105245_10005278
303 Ga0105245_10090780
304 Ga0114129_10012763
305 Ga0114129_10195042
306 Ga0114129_11136649
307 Ga0105243_10012441
308 Ga0105243_10306248
309 Ga0105242_10022587
310 Ga0105248_10048868
311 Ga0105249_10086086
312 Ga0157370_10676942
313 Ga0157378_10095149
314 Ga0163162_11050950
315 Ga0157375_10041721
316 Ga0207642_10029211
317 Ga0207680_10059831
318 Ga0207643_10172731
319 Ga0207684_10004931
320 Ga0207684_10060906
321 Ga0207684_10228280
322 Ga0207684_10271937
323 Ga0207707_10037843
324 Ga0207707_10070023
325 Ga0207707_10222737
326 Ga0207663_10228674
327 Ga0207662_10001018
328 Ga0207646_10153079
329 Ga0207681_10129017
330 Ga0207659_10032308
331 Ga0207687_10052476
332 Ga0207687_10066303
333 Ga0207664_10178021
334 Ga0207706_10043507
335 Ga0207686_10062500
336 Ga0207709_10019177
337 Ga0207669_10198437
338 Ga0207704_10018478
339 Ga0207689_10007753
340 Ga0207661_10400051
341 Ga0207667_10066045
342 Ga0207712_10034652
343 Ga0207668_10048649
344 Ga0207677_10055362
345 Ga0207703_10010359
346 Ga0207678_10004248
347 Ga0207641_10026125
348 Ga0207648_10013945
349 Ga0207683_10054877
350 Ga0209813_10014384
351 Ga0207428_10000079
352 Ga0268266_10068333
353 Ga0268265_10102248
354 Ga0268265_10122159
355 Ga0268264_10017194
356 Ga0265318_10083332
357 Ga0316575_10093093
358 Ga0316576_10033611
359 Ga0316577_10126652
360 Ga0307409_100166732
361 Ga0307416_100517441
362 Ga0316585_10008942
363 Ga0316596_1010489
364 Ga0373954_0005432
365 Ga0373933_0017138
366 Ga0373937_0422589
367 Ga0316582_0031119
368 Ga0316584_0010667
369 Ga0395901_0023564
370 Ga0400491_23878
371 Ga0400485_06186
372 Ga0400488_55056
373 Ga0400486_02662
374 Ga0439466_0067671
375 Ga0439431_0013059
376 Ga0439452_028213
377 Ga0439434_0035257
378 Ga0466957_0238068
379 Ga0466959_0215791
380 Ga0466959_0442248
381 Ga0451576_0377736
382 Ga0495638_0000931
383 Ga0495580_0300682
384 Ga0495584_0096402
385 Ga0495628_0060503
386 Ga0495628_0063112
387 Ga0495630_0002418
388 Ga0495630_0050919
389 Ga0495640_0007465
390 Ga0495586_0000260
391 Ga0495645_0194688
392 Ga0495656_0052315
393 Ga0495600_0006489
394 Ga0495674_0042511
395 Ga0495680_0018682
396 Ga0495684_0013345
397 Ga0496104_0124696
398 Ga0496106_0320977
399 Ga0496109_0020368
400 Ga0496109_0431784
401 Ga0496109_0586132
402 Ga0496111_0088928
403 Ga0496112_0005471
404 Ga0496112_0007202
405 Ga0496112_0105696
406 Ga0496112_0453703
407 Ga0496113_0134860
408 Ga0496115_0289751
409 Ga0501032_0070616
410 Ga0501034_0060473
411 Ga0501036_0686962
412 Ga0501039_0302637
413 Ga0501047_0049001
414 Ga0501068_0111164
415 Ga0501071_0086664
416 Ga0501073_0193709
417 Ga0501075_0169494
418 Ga0501075_0428878
419 Ga0501077_0202818
420 Ga0501080_0098406
421 Ga0501081_0426654
422 nmdc:mga00v17_212260_c1
423 nmdc:mga0yw44_200804_c1
424 nmdc:mga0k408_11706_c1
425 nmdc:mga0k408_8733_c1
426 nmdc:mga06z11_8434_c1
427 nmdc:mga07m45_71588_c1
428 nmdc:mga07m45_78766_c1
429 nmdc:mga05p37_169380_c1
430 nmdc:mga05p37_45032_c1
431 nmdc:mga05p37_754109_c1
432 nmdc:mga05p37_870253_c1
433 nmdc:mga05p37_93735_c1
434 nmdc:mga0qj67_16771_c1
435 nmdc:mga0qj67_419801_c1
436 nmdc:mga06r32_170795_c1
437 nmdc:mga06r32_44801_c1
438 nmdc:mga06r32_5621_c1
439 nmdc:mga08y16_61158_c1
440 nmdc:mga08y16_71575_c1
441 nmdc:mga0n895_229042_c1
442 nmdc:mga0rr50_132114_c1
443 nmdc:mga0a205_120557_c1
444 nmdc:mga0a205_80282_c1
445 Ga0501084_0077029
446 Ga0501084_0261556
447 Ga0530510_0382538
448 2692314684
449 2847420263
450 2960621316

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02683

DsbD

Cytochrome C biogenesis protein transmembrane region

39

253

0.95

PF13386

DsbD_2

Cytochrome C biogenesis protein transmembrane region

43

250

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
5vkv-assembly1.cif.gz_A solution nmr structure of the membrane electron transporter ccda 0.5363 3 216
5vkv-assembly1.cif.gz_A solution nmr structure of the membrane electron transporter ccda 0.4718 3 216
7zc6-assembly1.cif.gz_E na+ - translocating ferredoxin: nad+ reductase (rnf) of c. tetanomorphum 0.4351 7 192
8ahx-assembly1.cif.gz_A cryo-em structure of the nitrogen-fixation associated nadh:ferredoxin oxidoreductase rnf from azotobacter vinelandii 0.4079 55 200
7zc6-assembly1.cif.gz_E na+ - translocating ferredoxin: nad+ reductase (rnf) of c. tetanomorphum 0.36 7 192
ID Description Score Start End Superfamily
af_C6TIG3_1_228_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4098 1 216 1.20.1250.20
af_P67127_16_204_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3856 7 215 1.20.1250.20
af_C6TIG3_1_228_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.37 1 216 1.20.1250.20
af_P67127_16_204_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.368 7 215 1.20.1250.20
af_Q5AEB7_1_155_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.367 54 193 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A0R2P964-F1-model_v4 Thioredoxin domain-containing protein 0.8902 7 188 GO:0005886
GO:0016209
GO:0016491
GO:0017004
AF-A0A7W0XQN4-F1-model_v4 Cytochrome c biogenesis protein CcdA 0.8366 23 188 GO:0016020
GO:0017004
AF-A0A3P1S653-F1-model_v4 Multifunctional fusion protein [Includes: Peptide methionine sulfoxide reductase MsrA (Protein-methionine-S-oxide reductase) (EC 1.8.4.11) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase); Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) (Peptide-methionine (R)-S-oxide reductase)] 0.7489 3 217 GO:0005737
GO:0005886
GO:0008113
GO:0017004
GO:0033743
GO:0034599
GO:0036211
GO:0036456
AF-A0A813AHE4-F1-model_v4 CtpF protein 0.7442 1 225 GO:0005524
GO:0005886
GO:0009166
GO:0016887
GO:0017004
AF-A0A1G3PIU9-F1-model_v4 Thioredoxin domain-containing protein 0.7382 2 216 GO:0005886
GO:0016209
GO:0016491
GO:0017004

Map