F337566

General Info

Members Datasets Scaffolds Average Seq Length
225 165 213 501

Family's Representative Sequence

Representative Sequence 3300005546|Ga0070696_100015239|Ga0070696_1000152392
Length 549
Sequence VNAGGPVLEMRGVRKAFPGVVALDGVDLTLHAGDVHMLLGENGAGKSTLMKILSGAYRKDAGEIRIDGQVVDIGSPRDALALGIRVIYQELNLVPHLSVAENIFLGAMPTRWAGVVDWRSLYERASHVLGDLGLDASTLHARTPVSRLGMAQRQMVEIAKALAASAPTTLFELRRGLAVALRAKADEASARQALKVLVMDEPTSSLTSREVTQLFSLIERLTARGVAIVYITHRLDEVFRIGRRVTVLRDGRHVTTRLLSDVSVPELVRLMANRDLSEHFPKSRAARGPELLRVEHVSRGGALSDISLSLHAGEVLGIAGLVGAGRTELARVIAGADRCDNGRLFVDGGEVRLRGPADAIRRGIGLLPEDRKAQGLVPGLTVARNVALPHGRRLARLGVLTRRCEAALAAPIADELRVKATETQTVRLLSGGNQQKVVLGKWLAGDVRIFIFDEPTRGIDVGAKVEIYNLMNRLTARGAGIIMISSELPELLGMSDRILVMHRGRIQAEIDAAGATEERVLRAALGLERPALSDAAGAGGGXXXXGAEG

Samples

Sample ID Description Type Environment
1 2513237090 Mesorhizobium sp. WSM3224 Isolate Nodule
2 2513237305 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
3 2721755686 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
4 2756170246 Mesorhizobium loti DSM 2626 Isolate Nodule
5 2844002411 Mesorhizobium sp. M7D.F.Ca.US.005.01.1.1 Isolate Nodule
6 2857349434 Mesorhizobium sp. M2E.F.Ca.ET.166.01.1.1 Isolate Nodule
7 2968117919 Mesorhizobium atlanticum CNPSo 3140 Isolate Unclassified
8 2977864932 Mesorhizobium tamadayense DSM 28320 Isolate Nodule
9 2977942078 Mesorhizobium sp. M2E.F.Ca.ET.209.01.1.1 Isolate Nodule
10 2987636660 Mesorhizobium sp. M2E.F.Ca.ET.154.01.1.1 Isolate Nodule
11 3004203850 Mesorhizobium sp. M2E.F.Ca.ET.219.01.1.1 Isolate Nodule
12 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
13 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
14 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
17 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
18 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
19 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
34 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
37 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
38 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
47 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
48 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
49 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
50 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
54 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
57 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
60 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
61 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
63 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
64 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
65 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
66 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
70 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
71 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
74 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
75 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
102 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
103 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
104 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
105 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
106 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
107 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
108 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
109 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
110 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
111 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
112 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
113 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
114 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
115 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
116 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
117 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
118 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
119 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
120 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
121 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
122 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
123 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
124 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
125 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
126 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
127 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
128 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
129 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
130 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
131 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
132 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
133 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
134 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
135 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
136 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
137 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
138 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
139 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
140 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
141 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
142 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
143 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
147 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
148 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
149 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
150 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
151 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
152 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
153 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
154 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
155 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
156 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
157 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
158 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
159 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
160 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
161 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
162 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
163 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
164 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
165 637000159 Mesorhizobium japonicum MAFF 303099 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.67
Metatranscriptomes 0
Isolates 5.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.22
Nodule 4.44
Rhizoplane 3.11
Rhizosphere 85.78
Stem 0
Stem Tuber 0
Unclassified 4.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065712_10070207 3300005290 Bacteria 6222
2 Ga0065715_10089209 3300005293 Bacteria 12526
3 Ga0070666_10004226 3300005335 Bacteria 8721
4 Ga0070689_100023682 3300005340 Bacteria 4599
5 Ga0070691_10004879 3300005341 Bacteria 6105
6 Ga0070687_100012172 3300005343 Bacteria 3789
7 Ga0070668_100037080 3300005347 Bacteria 3722
8 Ga0070669_100007106 3300005353 Bacteria 8045
9 Ga0070671_100014199 3300005355 Bacteria 6431
10 Ga0070674_100062954 3300005356 Bacteria 2594
11 Ga0070667_100129282 3300005367 Bacteria 2203
12 Ga0070701_10074064 3300005438 Bacteria 1828
13 Ga0070700_100004208 3300005441 Bacteria 7507
14 Ga0070700_100041334 3300005441 Bacteria 2826
15 Ga0070694_100002624 3300005444 Bacteria 10629
16 Ga0070694_100045085 3300005444 Bacteria 2954
17 Ga0070662_100098579 3300005457 Bacteria 2208
18 Ga0070706_100011014 3300005467 Bacteria 8397
19 Ga0070698_100033522 3300005471 Bacteria 5318
20 Ga0070698_100053303 3300005471 Bacteria 4111
21 Ga0070699_100151013 3300005518 Bacteria 2055
22 Ga0070697_100019424 3300005536 Bacteria 5368
23 Ga0068853_100061474 3300005539 Bacteria 3249
24 Ga0070686_100001055 3300005544 Bacteria 15887
25 Ga0070686_100020601 3300005544 Bacteria 3904
26 Ga0070695_100010017 3300005545 Bacteria 5652
27 Ga0070695_100017688 3300005545 Bacteria 4325
28 Ga0070696_100010069 3300005546 Bacteria 6327
29 Ga0070696_100015239 3300005546 Bacteria 5162
30 Ga0070665_100006132 3300005548 Bacteria 12289
31 Ga0070665_100272772 3300005548 Bacteria 1693
32 Ga0070704_100007898 3300005549 Bacteria 6349
33 Ga0070704_100017767 3300005549 Bacteria 4533
34 Ga0070704_100086654 3300005549 Bacteria 2322
35 Ga0068854_100003523 3300005578 Bacteria 9779
36 Ga0070702_100001140 3300005615 Bacteria 10666
37 Ga0068859_100007044 3300005617 Bacteria 11419
38 Ga0068859_100040198 3300005617 Bacteria 4695
39 Ga0068859_100155628 3300005617 Bacteria 2363
40 Ga0068864_100032456 3300005618 Bacteria 4437
41 Ga0068861_100002681 3300005719 Bacteria 11660
42 Ga0068861_100018502 3300005719 Bacteria 4963
43 Ga0068863_100026766 3300005841 Bacteria 5499
44 Ga0068863_100123873 3300005841 Bacteria 2466
45 Ga0068858_100130804 3300005842 Bacteria 2353
46 Ga0068860_100117563 3300005843 Bacteria 2544
47 Ga0068862_100022710 3300005844 Bacteria 5249
48 Ga0075370_10017308 3300006353 Bacteria 3894
49 Ga0068871_100012053 3300006358 Bacteria 6361
50 Ga0075428_100017137 3300006844 Bacteria 8003
51 Ga0075428_100022216 3300006844 Bacteria 7024
52 Ga0075428_100054498 3300006844 Bacteria 4382
53 Ga0075430_100000474 3300006846 Bacteria 30061
54 Ga0075430_100144122 3300006846 Bacteria 1984
55 Ga0075433_10022359 3300006852 Bacteria 5307
56 Ga0075434_100000743 3300006871 Bacteria 25604
57 Ga0075434_100027587 3300006871 Bacteria 5576
58 Ga0075429_100107673 3300006880 Bacteria 2436
59 Ga0075429_100195893 3300006880 Bacteria 1770
60 Ga0068865_100027723 3300006881 Bacteria 3744
61 Ga0075436_100002508 3300006914 Bacteria 12626
62 Ga0075436_100043787 3300006914 Bacteria 3086
63 Ga0097620_100007044 3300006931 Bacteria 11419
64 Ga0097620_100040198 3300006931 Bacteria 4695
65 Ga0097620_100155628 3300006931 Bacteria 2363
66 Ga0075435_100000039 3300007076 Bacteria 67464
67 Ga0075435_100001357 3300007076 Bacteria 15774
68 Ga0075435_100070066 3300007076 Bacteria 2861
69 Ga0105244_10002583 3300009036 Bacteria 13595
70 Ga0111539_10030008 3300009094 Bacteria 6615
71 Ga0111539_10114119 3300009094 Bacteria 3168
72 Ga0111539_10182892 3300009094 Bacteria 2448
73 Ga0111539_10299894 3300009094 Bacteria 1870
74 Ga0105245_10015790 3300009098 Bacteria 6584
75 Ga0105245_10057052 3300009098 Bacteria 3512
76 Ga0105247_10002620 3300009101 Bacteria 12148
77 Ga0114129_10008365 3300009147 Bacteria 14743
78 Ga0114129_10015372 3300009147 Bacteria 10891
79 Ga0114129_10015799 3300009147 Bacteria 10733
80 Ga0114129_10131016 3300009147 Bacteria 3444
81 Ga0114129_10131392 3300009147 Bacteria 3438
82 Ga0105243_10006914 3300009148 Bacteria 8743
83 Ga0105243_10017202 3300009148 Bacteria 5468
84 Ga0105242_10189199 3300009176 Bacteria 1821
85 Ga0105248_10001661 3300009177 Bacteria 24746
86 Ga0105248_10005119 3300009177 Bacteria 14465
87 Ga0105238_10007142 3300009551 Bacteria 11168
88 Ga0105239_10166051 3300010375 Bacteria 2468
89 Ga0163162_10012147 3300013306 Bacteria 8406
90 Ga0157372_10152929 3300013307 Bacteria 2664
91 Ga0163163_10034146 3300014325 Bacteria 4924
92 Ga0157380_10003173 3300014326 Bacteria 11217
93 Ga0157380_10013307 3300014326 Bacteria 5994
94 Ga0157380_10015731 3300014326 Bacteria 5563
95 Ga0157379_10125841 3300014968 Bacteria 2306
96 Ga0157376_10025159 3300014969 Bacteria 4685
97 Ga0157376_10134716 3300014969 Bacteria 2209
98 Ga0213872_10006349 3300021361 Bacteria 5949
99 Ga0213876_10080154 3300021384 Bacteria 1726
100 Ga0209051_1004419 3300025303 Bacteria 8675
101 Ga0207655_1000420 3300025728 Bacteria 57789
102 Ga0207653_10032491 3300025885 Bacteria 1688
103 Ga0207645_10000738 3300025907 Bacteria 27256
104 Ga0207671_10035301 3300025914 Bacteria 3712
105 Ga0207662_10006889 3300025918 Bacteria 6159
106 Ga0207646_10029526 3300025922 Bacteria 4981
107 Ga0207681_10028196 3300025923 Bacteria 3636
108 Ga0207694_10043143 3300025924 Bacteria 3481
109 Ga0207687_10044390 3300025927 Bacteria 3067
110 Ga0207686_10119195 3300025934 Bacteria 1793
111 Ga0207704_10011147 3300025938 Bacteria 4414
112 Ga0207691_10055671 3300025940 Bacteria 3604
113 Ga0207711_10020407 3300025941 Bacteria 5524
114 Ga0207711_10109357 3300025941 Bacteria 2456
115 Ga0207667_10219863 3300025949 Bacteria 1946
116 Ga0207640_10048136 3300025981 Bacteria 2754
117 Ga0207703_10039710 3300026035 Bacteria 3762
118 Ga0207639_10041173 3300026041 Bacteria 3454
119 Ga0207708_10009097 3300026075 Bacteria 7350
120 Ga0207641_10000531 3300026088 Bacteria 42739
121 Ga0207641_10033635 3300026088 Bacteria 4259
122 Ga0207641_10038064 3300026088 Bacteria 4021
123 Ga0207648_10003769 3300026089 Bacteria 15839
124 Ga0207676_10119878 3300026095 Bacteria 2216
125 Ga0207674_10145082 3300026116 Bacteria 2332
126 Ga0207675_100001643 3300026118 Bacteria 22401
127 Ga0207675_100058511 3300026118 Bacteria 3597
128 Ga0268266_10073389 3300028379 Bacteria 2969
129 Ga0268265_10005341 3300028380 Bacteria 8803
130 Ga0268265_10064865 3300028380 Bacteria 2815
131 Ga0268265_10074983 3300028380 Bacteria 2648
132 Ga0265314_10025282 3300031711 Bacteria 4484
133 Ga0307413_10085459 3300031824 Bacteria 2037
134 Ga0307416_100086035 3300032002 Bacteria 2678
135 Ga0373930_0001704 3300034816 Bacteria 3334
136 Ga0373928_0003271 3300035084 Bacteria 3102
137 Ga0373929_0000397 3300035085 Bacteria 8176
138 Ga0373940_0002824 3300035088 Bacteria 3449
139 Ga0373949_0011416 3300035090 Bacteria 1957
140 Ga0373951_0008377 3300035091 Bacteria 2337
141 Ga0373952_0000736 3300035092 Bacteria 5859
142 Ga0373939_0001216 3300035114 Bacteria 6288
143 Ga0373941_0002468 3300035115 Bacteria 4077
144 Ga0373961_0001283 3300035241 Bacteria 7654
145 Ga0373931_0029455 3300035691 Bacteria 2818
146 Ga0373927_0000417 3300035695 Bacteria 32693
147 Ga0436365_1581026 3300039437 Bacteria 2579
148 Ga0436365_1883960 3300039437 Bacteria 2369
149 Ga0436361_0021023 3300039447 Bacteria 16456
150 Ga0436361_0026508 3300039447 Bacteria 3212
151 Ga0436361_0895728 3300039447 Bacteria 3144
152 Ga0436363_1712676 3300039450 Bacteria 10851
153 Ga0450896_003073 3300042133 Bacteria 2196
154 Ga0439464_0016643 3300042439 Bacteria 1990
155 Ga0451576_0014393 3300045051 Bacteria 8808
156 Ga0495638_0007842 3300046460 Bacteria 7619
157 Ga0495651_0005284 3300046462 Bacteria 9844
158 Ga0495628_0160501 3300046516 Bacteria 1708
159 Ga0495640_0032476 3300046533 Bacteria 3718
160 Ga0495587_0038525 3300046536 Bacteria 2865
161 Ga0495623_0039065 3300046679 Bacteria 3034
162 Ga0495604_0006486 3300047317 Bacteria 9273
163 Ga0495674_0008991 3300047319 Bacteria 9492
164 Ga0495680_0105623 3300047322 Bacteria 2094
165 Ga0495686_0017919 3300047472 Bacteria 4762
166 Ga0495686_0019677 3300047472 Bacteria 4508
167 Ga0495602_0026695 3300048088 Bacteria 5565
168 Ga0496104_0009906 3300048907 Bacteria 8509
169 Ga0496106_0142965 3300048909 Bacteria 1883
170 Ga0496108_0015587 3300048911 Bacteria 6200
171 Ga0496109_0086196 3300048912 Bacteria 2900
172 Ga0496112_0001337 3300048915 Bacteria 18749
173 Ga0496112_0084757 3300048915 Bacteria 3135
174 Ga0496114_0051413 3300048917 Bacteria 3431
175 Ga0496116_0001309 3300048919 Bacteria 28372
176 Ga0496119_0006643 3300048922 Bacteria 10640
177 Ga0496120_0000414 3300048923 Bacteria 68051
178 Ga0496126_0002843 3300048929 Bacteria 22649
179 Ga0501036_0094194 3300049572 Bacteria 2531
180 Ga0501042_0017341 3300049578 Bacteria 4965
181 Ga0501048_0022755 3300049582 Bacteria 4582
182 Ga0501071_0013494 3300049587 Bacteria 5569
183 Ga0501074_0069304 3300049590 Bacteria 2536
184 Ga0501075_0008729 3300049591 Bacteria 7066
185 Ga0501079_0012431 3300049741 Bacteria 6496
186 nmdc:mga03n38_2310_c1 3300050490 Bacteria 5853
187 nmdc:mga07m45_6905_c1 3300050496 Bacteria 5774
188 nmdc:mga05p37_27946_c1 3300050507 Bacteria 6872
189 nmdc:mga05p37_47428_c1 3300050507 Bacteria 5283
190 nmdc:mga05p37_54567_c1 3300050507 Bacteria 4916
191 nmdc:mga05p37_83840_c1 3300050507 Bacteria 3927
192 nmdc:mga05p37_92670_c1 3300050507 Bacteria 3723
193 nmdc:mga0qj67_150169_c1 3300050509 Bacteria 1890
194 nmdc:mga0qj67_29624_c1 3300050509 Bacteria 4252
195 nmdc:mga08y16_21622_c1 3300050511 Bacteria 6793
196 nmdc:mga08y16_34015_c1 3300050511 Bacteria 5354
197 nmdc:mga08y16_51304_c1 3300050511 Bacteria 4316
198 nmdc:mga08y16_6701_c1 3300050511 Bacteria 12080
199 nmdc:mga0n895_33611_c1 3300050512 Bacteria 4930
200 nmdc:mga0n895_550_c1 3300050512 Bacteria 25645
201 nmdc:mga0rr50_1_c1 3300050513 Bacteria 558123
202 nmdc:mga0rr50_6063_c1 3300050513 Bacteria 7303
203 nmdc:mga08x19_10703_c1 3300050514 Bacteria 5512
204 nmdc:mga08x19_581_c1 3300050514 Bacteria 23762
205 nmdc:mga0a205_73646_c1 3300050515 Bacteria 3299
206 Ga0495601_0013481 3300053077 Bacteria 4916
207 Ga0495601_0019239 3300053077 Bacteria 4164
208 Ga0495595_0001944 3300053084 Bacteria 8026
209 Ga0500645_002596 3300053730 Bacteria 7941
210 Ga0590071_000026 3300059421 Bacteria 37861
211 Ga0590075_000272 3300059424 Bacteria 14656
212 Ga0590077_000292 3300059426 Bacteria 14196
213 Ga0590077_014029 3300059426 Bacteria 1667

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300039447 Ga0436361_0895728 Ga0436361_0895728_25_1317 421
2 3300013307 Ga0157372_10152929 Ga0157372_101529292 454
3 3300006852 Ga0075433_10022359 Ga0075433_100223592 459
4 3300007076 Ga0075435_100070066 Ga0075435_1000700663 459
5 3300050507 nmdc:mga05p37_27946_c1 nmdc:mga05p37_27946_c1_4690_6237 459
6 3300050515 nmdc:mga0a205_73646_c1 nmdc:mga0a205_73646_c1_1471_3018 459
7 3300005518 Ga0070699_100151013 Ga0070699_1001510132 460
8 3300042133 Ga0450896_003073 Ga0450896_003073_59_1555 461
9 3300050511 nmdc:mga08y16_51304_c1 nmdc:mga08y16_51304_c1_2894_4300 462
10 3300005539 Ga0068853_100061474 Ga0068853_1000614742 468
11 3300009551 Ga0105238_10007142 Ga0105238_100071423 468
12 3300010375 Ga0105239_10166051 Ga0105239_101660512 468
13 3300025914 Ga0207671_10035301 Ga0207671_100353012 468
14 3300025924 Ga0207694_10043143 Ga0207694_100431433 468
15 3300026041 Ga0207639_10041173 Ga0207639_100411732 468
16 3300005356 Ga0070674_100062954 Ga0070674_1000629542 469
17 3300014326 Ga0157380_10013307 Ga0157380_100133073 469
18 3300031824 Ga0307413_10085459 Ga0307413_100854592 469
19 3300050511 nmdc:mga08y16_21622_c1 nmdc:mga08y16_21622_c1_3930_5501 472
20 3300005457 Ga0070662_100098579 Ga0070662_1000985792 473
21 3300005844 Ga0068862_100022710 Ga0068862_1000227102 473
22 3300028380 Ga0268265_10005341 Ga0268265_100053413 473
23 3300035695 Ga0373927_0000417 Ga0373927_0000417_6320_7816 473
24 3300006353 Ga0075370_10017308 Ga0075370_100173081 477
25 3300006871 Ga0075434_100000743 Ga0075434_10000074320 477
26 3300006914 Ga0075436_100002508 Ga0075436_1000025085 477
27 3300007076 Ga0075435_100000039 Ga0075435_10000003919 477
28 3300050490 nmdc:mga03n38_2310_c1 nmdc:mga03n38_2310_c1_2261_3754 477
29 3300050496 nmdc:mga07m45_6905_c1 nmdc:mga07m45_6905_c1_923_2416 477
30 3300050512 nmdc:mga0n895_550_c1 nmdc:mga0n895_550_c1_4754_6310 477
31 3300050513 nmdc:mga0rr50_1_c1 nmdc:mga0rr50_1_c1_380975_382531 477
32 3300050514 nmdc:mga08x19_581_c1 nmdc:mga08x19_581_c1_16948_18504 477
33 3300014325 Ga0163163_10034146 Ga0163163_100341465 478
34 3300047472 Ga0495686_0017919 Ga0495686_0017919_1084_2577 478
35 iso_pu_bacteria 2857349434 2857357621 480
36 3300005341 Ga0070691_10004879 Ga0070691_100048795 482
37 3300005441 Ga0070700_100004208 Ga0070700_1000042085 482
38 3300005545 Ga0070695_100010017 Ga0070695_1000100173 482
39 3300005546 Ga0070696_100010069 Ga0070696_1000100692 482
40 3300005615 Ga0070702_100001140 Ga0070702_1000011405 482
41 3300005719 Ga0068861_100002681 Ga0068861_1000026817 482
42 3300006846 Ga0075430_100144122 Ga0075430_1001441222 482
43 3300009147 Ga0114129_10008365 Ga0114129_100083656 482
44 3300009148 Ga0105243_10006914 Ga0105243_100069144 482
45 3300025907 Ga0207645_10000738 Ga0207645_1000073814 482
46 3300026075 Ga0207708_10009097 Ga0207708_100090974 482
47 3300026089 Ga0207648_10003769 Ga0207648_1000376911 482
48 3300026118 Ga0207675_100001643 Ga0207675_1000016435 482
49 3300050507 nmdc:mga05p37_47428_c1 nmdc:mga05p37_47428_c1_1072_2616 482
50 3300050509 nmdc:mga0qj67_150169_c1 nmdc:mga0qj67_150169_c1_154_1722 482
51 3300048917 Ga0496114_0051413 Ga0496114_0051413_874_2379 483
52 3300005548 Ga0070665_100272772 Ga0070665_1002727721 484
53 3300005617 Ga0068859_100155628 Ga0068859_1001556283 484
54 3300005842 Ga0068858_100130804 Ga0068858_1001308041 484
55 3300006931 Ga0097620_100155628 Ga0097620_1001556283 484
56 3300009098 Ga0105245_10057052 Ga0105245_100570523 485
57 3300014969 Ga0157376_10134716 Ga0157376_101347162 485
58 3300021361 Ga0213872_10006349 Ga0213872_100063494 485
59 3300021384 Ga0213876_10080154 Ga0213876_100801542 485
60 3300039437 Ga0436365_1883960 Ga0436365_1883960_236_1762 485
61 3300039447 Ga0436361_0026508 Ga0436361_0026508_1397_2923 485
62 3300006871 Ga0075434_100027587 Ga0075434_1000275874 486
63 3300007076 Ga0075435_100001357 Ga0075435_1000013575 486
64 3300025303 Ga0209051_1004419 Ga0209051_10044196 486
65 3300034816 Ga0373930_0001704 Ga0373930_0001704_246_1835 486
66 3300035084 Ga0373928_0003271 Ga0373928_0003271_505_2094 486
67 3300035085 Ga0373929_0000397 Ga0373929_0000397_3394_4983 486
68 3300035091 Ga0373951_0008377 Ga0373951_0008377_505_2094 486
69 3300035092 Ga0373952_0000736 Ga0373952_0000736_3154_4743 486
70 3300035114 Ga0373939_0001216 Ga0373939_0001216_3760_5349 486
71 3300035115 Ga0373941_0002468 Ga0373941_0002468_2047_3636 486
72 3300035241 Ga0373961_0001283 Ga0373961_0001283_5790_7379 486
73 3300035691 Ga0373931_0029455 Ga0373931_0029455_443_2032 486
74 3300039437 Ga0436365_1581026 Ga0436365_1581026_736_2292 486
75 3300039450 Ga0436363_1712676 Ga0436363_1712676_5409_6965 486
76 3300050513 nmdc:mga0rr50_6063_c1 nmdc:mga0rr50_6063_c1_1628_3217 486
77 3300005347 Ga0070668_100037080 Ga0070668_1000370802 487
78 3300005353 Ga0070669_100007106 Ga0070669_1000071063 487
79 3300005444 Ga0070694_100002624 Ga0070694_1000026247 487
80 3300005471 Ga0070698_100053303 Ga0070698_1000533034 487
81 3300005544 Ga0070686_100020601 Ga0070686_1000206012 487
82 3300005549 Ga0070704_100007898 Ga0070704_1000078986 487
83 3300005617 Ga0068859_100040198 Ga0068859_1000401982 487
84 3300006880 Ga0075429_100195893 Ga0075429_1001958931 487
85 3300006914 Ga0075436_100043787 Ga0075436_1000437872 487
86 3300006931 Ga0097620_100040198 Ga0097620_1000401982 487
87 3300009036 Ga0105244_10002583 Ga0105244_100025836 487
88 3300009094 Ga0111539_10299894 Ga0111539_102998942 487
89 3300025728 Ga0207655_1000420 Ga0207655_100042043 487
90 3300048919 Ga0496116_0001309 Ga0496116_0001309_424_1908 487
91 3300048922 Ga0496119_0006643 Ga0496119_0006643_3295_4779 487
92 3300048923 Ga0496120_0000414 Ga0496120_0000414_9925_11409 487
93 3300050514 nmdc:mga08x19_10703_c1 nmdc:mga08x19_10703_c1_529_2079 487
94 iso_pu_bacteria 2513237090 2513611631 487
95 iso_pu_bacteria 2513237305 2514422219 487
96 iso_pu_bacteria 2721755686 2723574885 487
97 iso_pu_bacteria 2756170246 2756676207 487
98 iso_pu_bacteria 2844002411 2844004875 487
99 iso_pu_bacteria 2968117919 2968118943 487
100 iso_pu_bacteria 2977864932 2977871271 487
101 iso_pu_bacteria 2977942078 2977946266 487
102 iso_pu_bacteria 2987636660 2987645123 487
103 iso_pu_bacteria 3004203850 3004206639 487
104 iso_pu_bacteria 637000159 637074137 487
105 3300006844 Ga0075428_100022216 Ga0075428_1000222164 488
106 3300006844 Ga0075428_100054498 Ga0075428_1000544984 488
107 3300006880 Ga0075429_100107673 Ga0075429_1001076732 488
108 3300009147 Ga0114129_10131392 Ga0114129_101313922 488
109 3300026116 Ga0207674_10145082 Ga0207674_101450821 488
110 3300049572 Ga0501036_0094194 Ga0501036_0094194_427_1899 488
111 3300049578 Ga0501042_0017341 Ga0501042_0017341_232_1704 488
112 3300049582 Ga0501048_0022755 Ga0501048_0022755_1358_2830 488
113 3300049587 Ga0501071_0013494 Ga0501071_0013494_3997_5469 488
114 3300059421 Ga0590071_000026 Ga0590071_000026_4864_6441 488
115 3300059424 Ga0590075_000272 Ga0590075_000272_11992_13569 488
116 3300059426 Ga0590077_000292 Ga0590077_000292_263_1840 488
117 3300005467 Ga0070706_100011014 Ga0070706_1000110144 489
118 3300005471 Ga0070698_100033522 Ga0070698_1000335225 489
119 3300005536 Ga0070697_100019424 Ga0070697_1000194242 489
120 3300005549 Ga0070704_100017767 Ga0070704_1000177672 489
121 3300046462 Ga0495651_0005284 Ga0495651_0005284_3340_4890 489
122 3300046536 Ga0495587_0038525 Ga0495587_0038525_991_2541 489
123 3300047472 Ga0495686_0019677 Ga0495686_0019677_1759_3258 489
124 3300048088 Ga0495602_0026695 Ga0495602_0026695_3046_4596 489
125 3300053077 Ga0495601_0019239 Ga0495601_0019239_1183_2733 489
126 3300039447 Ga0436361_0021023 Ga0436361_0021023_13384_14892 490
127 3300048929 Ga0496126_0002843 Ga0496126_0002843_6119_7645 490
128 3300005340 Ga0070689_100023682 Ga0070689_1000236822 491
129 3300005355 Ga0070671_100014199 Ga0070671_1000141993 491
130 3300005367 Ga0070667_100129282 Ga0070667_1001292822 491
131 3300031711 Ga0265314_10025282 Ga0265314_100252823 491
132 3300048909 Ga0496106_0142965 Ga0496106_0142965_98_1666 491
133 3300005441 Ga0070700_100041334 Ga0070700_1000413342 492
134 3300009094 Ga0111539_10182892 Ga0111539_101828922 492
135 3300009101 Ga0105247_10002620 Ga0105247_100026209 492
136 3300009177 Ga0105248_10005119 Ga0105248_100051194 492
137 3300025923 Ga0207681_10028196 Ga0207681_100281963 492
138 3300025949 Ga0207667_10219863 Ga0207667_102198632 492
139 3300026088 Ga0207641_10033635 Ga0207641_100336352 492
140 3300028380 Ga0268265_10064865 Ga0268265_100648652 492
141 3300046516 Ga0495628_0160501 Ga0495628_0160501_70_1659 492
142 3300046533 Ga0495640_0032476 Ga0495640_0032476_188_1777 492
143 3300046679 Ga0495623_0039065 Ga0495623_0039065_353_1942 492
144 3300047317 Ga0495604_0006486 Ga0495604_0006486_6635_8224 492
145 3300047319 Ga0495674_0008991 Ga0495674_0008991_1571_3160 492
146 3300047322 Ga0495680_0105623 Ga0495680_0105623_150_1739 492
147 3300048907 Ga0496104_0009906 Ga0496104_0009906_6020_7552 492
148 3300048911 Ga0496108_0015587 Ga0496108_0015587_3571_5103 492
149 3300048912 Ga0496109_0086196 Ga0496109_0086196_958_2490 492
150 3300048915 Ga0496112_0001337 Ga0496112_0001337_15858_17390 492
151 3300053077 Ga0495601_0013481 Ga0495601_0013481_949_2538 492
152 3300053084 Ga0495595_0001944 Ga0495595_0001944_5900_7489 492
153 3300053730 Ga0500645_002596 Ga0500645_002596_5897_7396 492
154 3300005438 Ga0070701_10074064 Ga0070701_100740641 493
155 3300005444 Ga0070694_100045085 Ga0070694_1000450852 493
156 3300005549 Ga0070704_100086654 Ga0070704_1000866542 493
157 3300009094 Ga0111539_10030008 Ga0111539_100300083 493
158 3300009147 Ga0114129_10131016 Ga0114129_101310162 493
159 3300014326 Ga0157380_10003173 Ga0157380_100031732 493
160 3300025885 Ga0207653_10032491 Ga0207653_100324911 493
161 3300050507 nmdc:mga05p37_54567_c1 nmdc:mga05p37_54567_c1_1217_2731 493
162 3300050511 nmdc:mga08y16_34015_c1 nmdc:mga08y16_34015_c1_2474_4003 493
163 3300005293 Ga0065715_10089209 Ga0065715_100892096 494
164 3300005545 Ga0070695_100017688 Ga0070695_1000176884 494
165 3300005546 Ga0070696_100015239 Ga0070696_1000152392 494
166 3300005617 Ga0068859_100007044 Ga0068859_1000070446 494
167 3300005719 Ga0068861_100018502 Ga0068861_1000185022 494
168 3300006358 Ga0068871_100012053 Ga0068871_1000120533 494
169 3300006844 Ga0075428_100017137 Ga0075428_1000171375 494
170 3300006846 Ga0075430_100000474 Ga0075430_10000047418 494
171 3300006881 Ga0068865_100027723 Ga0068865_1000277232 494
172 3300006931 Ga0097620_100007044 Ga0097620_1000070446 494
173 3300009094 Ga0111539_10114119 Ga0111539_101141192 494
174 3300009148 Ga0105243_10017202 Ga0105243_100172024 494
175 3300009176 Ga0105242_10189199 Ga0105242_101891991 494
176 3300014326 Ga0157380_10015731 Ga0157380_100157314 494
177 3300014968 Ga0157379_10125841 Ga0157379_101258412 494
178 3300014969 Ga0157376_10025159 Ga0157376_100251592 494
179 3300025922 Ga0207646_10029526 Ga0207646_100295263 494
180 3300025934 Ga0207686_10119195 Ga0207686_101191952 494
181 3300025938 Ga0207704_10011147 Ga0207704_100111472 494
182 3300026118 Ga0207675_100058511 Ga0207675_1000585113 494
183 3300028380 Ga0268265_10074983 Ga0268265_100749832 494
184 3300032002 Ga0307416_100086035 Ga0307416_1000860352 494
185 3300042439 Ga0439464_0016643 Ga0439464_0016643_310_1815 494
186 3300046460 Ga0495638_0007842 Ga0495638_0007842_1903_3549 494
187 3300048915 Ga0496112_0084757 Ga0496112_0084757_1174_2715 494
188 3300049590 Ga0501074_0069304 Ga0501074_0069304_434_1933 494
189 3300049591 Ga0501075_0008729 Ga0501075_0008729_4603_6102 494
190 3300049741 Ga0501079_0012431 Ga0501079_0012431_620_2119 494
191 3300050509 nmdc:mga0qj67_29624_c1 nmdc:mga0qj67_29624_c1_1935_3440 494
192 3300050511 nmdc:mga08y16_6701_c1 nmdc:mga08y16_6701_c1_112_1626 494
193 3300005335 Ga0070666_10004226 Ga0070666_100042262 495
194 3300005343 Ga0070687_100012172 Ga0070687_1000121723 495
195 3300005544 Ga0070686_100001055 Ga0070686_1000010557 495
196 3300005578 Ga0068854_100003523 Ga0068854_1000035232 495
197 3300005843 Ga0068860_100117563 Ga0068860_1001175632 495
198 3300025918 Ga0207662_10006889 Ga0207662_100068894 495
199 3300025981 Ga0207640_10048136 Ga0207640_100481362 495
200 3300035088 Ga0373940_0002824 Ga0373940_0002824_1335_2924 495
201 3300045051 Ga0451576_0014393 Ga0451576_0014393_5043_6632 495
202 3300005841 Ga0068863_100026766 Ga0068863_1000267665 496
203 3300005841 Ga0068863_100123873 Ga0068863_1001238732 496
204 3300009147 Ga0114129_10015372 Ga0114129_100153727 496
205 3300009147 Ga0114129_10015799 Ga0114129_100157993 496
206 3300009177 Ga0105248_10001661 Ga0105248_1000166110 496
207 3300013306 Ga0163162_10012147 Ga0163162_100121473 496
208 3300025940 Ga0207691_10055671 Ga0207691_100556712 496
209 3300025941 Ga0207711_10020407 Ga0207711_100204074 496
210 3300026088 Ga0207641_10000531 Ga0207641_1000053129 496
211 3300026088 Ga0207641_10038064 Ga0207641_100380642 496
212 3300035090 Ga0373949_0011416 Ga0373949_0011416_305_1861 496
213 3300050507 nmdc:mga05p37_83840_c1 nmdc:mga05p37_83840_c1_1250_2794 496
214 3300050507 nmdc:mga05p37_92670_c1 nmdc:mga05p37_92670_c1_1024_2544 496
215 3300050512 nmdc:mga0n895_33611_c1 nmdc:mga0n895_33611_c1_3186_4709 496
216 3300005290 Ga0065712_10070207 Ga0065712_100702072 497
217 3300005548 Ga0070665_100006132 Ga0070665_1000061329 497
218 3300005618 Ga0068864_100032456 Ga0068864_1000324564 497
219 3300009098 Ga0105245_10015790 Ga0105245_100157904 497
220 3300025927 Ga0207687_10044390 Ga0207687_100443902 497
221 3300025941 Ga0207711_10109357 Ga0207711_101093572 497
222 3300026035 Ga0207703_10039710 Ga0207703_100397103 497
223 3300026095 Ga0207676_10119878 Ga0207676_101198782 497
224 3300028379 Ga0268266_10073389 Ga0268266_100733892 497
225 3300059426 Ga0590077_014029 Ga0590077_014029_54_1613 497

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

23

171

0.9

PF00005

ABC_tran

ABC transporter

303

457

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
6b89-assembly1.cif.gz_A e. coli lptb in complex with adp and novobiocin 0.8943 4 229
6z67-assembly3.cif.gz_E ftse structure of streptococcus pneumoniae in complex with amppnp at 2.4 a resolution 0.8844 1 226
5x41-assembly2.cif.gz_D 3.5a resolution structure of a cobalt energy-coupling factor transporter using lcp method-cbimqo 0.8719 1 229
7efo-assembly1.cif.gz_A lptb2fg-lps from klebsiella pneumoniae in nanodiscs 0.8678 4 237
2pcj-assembly1.cif.gz_B crystal structure of abc transporter (aq_297) from aquifex aeolicus vf5 0.8668 1 226
ID Description Score Start End Superfamily
af_P0AAG8_265_500_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9753 259 488 3.40.50.300
af_P04983_256_497_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.97 259 495 3.40.50.300
af_P0AAF3_266_503_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9695 266 492 3.40.50.300
af_Q6BEX0_1_254_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9682 1 247 3.40.50.300
af_Q6BEX0_265_495_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9597 261 488 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A2U2S9Q4-F1-model_v4 ABC transporter ATP-binding protein 0.9746 1 241 GO:0005524
GO:0016887
AF-A0A353RC70-F1-model_v4 Ribose/galactose/methyl galactoside import ATP-binding protein (EC 7.5.2.11) 0.9733 2 239 GO:0005524
GO:0005886
GO:0016887
GO:0043211
AF-A0A540W282-F1-model_v4 Sugar ABC transporter ATP-binding protein 0.9723 2 241 GO:0005524
GO:0016887
AF-A0A1W2CIV3-F1-model_v4 Monosaccharide ABC transporter ATP-binding protein, CUT2 family 0.972 2 239 GO:0005524
GO:0016887
AF-A0A257SHU1-F1-model_v4 ABC transporter domain-containing protein 0.9705 274 494 GO:0005524
GO:0016887

Feature Viewer

pLDDT pTM Quality
88.75 0.59 Medium
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Predicted Structure (AlphaFold2)

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