F337442

General Info

Members Datasets Scaffolds Average Seq Length
225 155 193 603

Family's Representative Sequence

Representative Sequence 3300005335|Ga0070666_10023097|Ga0070666_100230972
Length 654
Sequence MLLAPDKSKRESIDVRIIDLVIFYVKIIPVSIVLFGKTRQNRILCERLTIMVCHKKLSILLIFLLGYCMSFAQTAQLPTPWTNTAIQAAVPLPEYPRPQMERDEWMCLNGKWDYRGGKEAPDALQPLKPASFEGVTGKILVPYCPESFLSGVRRKQEINMWYRRTIEIPASWKNKQVVLHFGAVDHDATVFLNGEKVGSHAGGYDAFEFNITPFLKKGANTLIVAAHDPNDGTTPSGKNGPRGDYAFSSGIWQTVWMEPVSVNYIKSIRVLPDVEGRRLKILINGGANGKVTAVALANGKTISQVAAGTGAAFYLPIENPVLWSPDSPFLYDLKLTLYNADGSFADVVKSYFGMRDIRLGKLNGVIRPFINGKFIMQLGLLDQGYWPDGVLTAPTDEALKFDMLYTKKAGYNLIRKHMKTEPQRFYYWADKLGLFIWQDMPAIWYQHDDTARNRSTFRKELKAIIDDHYNSPSIITWVPFNENWGAFDVREITDWVRQYDPSRLVNGNSGFNNNPDYQKPYGDPGNGDYVDTHIYIGPYGASVPDDHRAASLGEFGGVGLFTRGHMWPVENNAYAYEPTGTALTDRYVLLLQQVEQLMKYQGLSVAIYTQTTDVEHEVNGILTYDRVTEKMQLNRIWKANDAVIRDGEKMNDRH

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2508501039 Frankia saprophytica CN3 Isolate Nodule
3 2517572101 Frankia sp. DC12 Isolate Nodule
4 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
5 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
6 2687453737 Frankia sp. BMG5.36 Isolate Nodule
7 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
8 2738541302 Pedobacter sp. CF074 Isolate Unclassified
9 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
10 2818991437 Pedobacter terrae 518 Isolate Unclassified
11 2818991440 Luteibacter yeojuensis 583 Isolate Unclassified
12 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
13 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
14 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
15 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
16 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
17 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
18 2904463128 Luteibacter yeojuensis 3191 Isolate Unclassified
19 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
20 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
21 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
22 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
23 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
24 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
25 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
26 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
27 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
28 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
29 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
30 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
31 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
32 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
33 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
34 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
35 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
36 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
37 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
38 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
39 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
40 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
41 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
42 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
43 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
44 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
45 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
46 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
47 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
48 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
49 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
50 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
51 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
52 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
53 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
54 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
55 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
56 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
57 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
58 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
59 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
60 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
61 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
62 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
63 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
64 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
65 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
66 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
67 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
68 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
69 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
70 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
71 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
72 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
73 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
74 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
75 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
76 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
77 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
78 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
79 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
80 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
81 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
82 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
83 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
85 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
86 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
88 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
89 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
91 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
92 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
94 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
107 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
108 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
109 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
110 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
111 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
112 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
113 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
114 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
115 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
116 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
117 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
118 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
119 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
120 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
121 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
122 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
123 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
124 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
125 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
126 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
127 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
128 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
129 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
130 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
131 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
132 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
133 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
134 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
135 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
136 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
137 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
138 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
139 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
140 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
141 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
142 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
143 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
144 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
145 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
146 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
147 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
148 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
149 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
150 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
151 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
152 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
153 8002775197 Frankia nepalensis CN7 Isolate Nodule
154 8002784119 Frankia sp. AgB1.9 Isolate Nodule
155 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 85.78
Metatranscriptomes 0
Isolates 14.22

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.44
Nodule 3.11
Rhizoplane 0.89
Rhizosphere 55.11
Stem 0
Stem Tuber 0
Unclassified 20.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1178953 2162886007 Bacteria 7199
2 JGI24740J21852_10000520 3300001979 Bacteria 16552
3 JGI24735J21928_10000016 3300002067 Bacteria 157028
4 JGI25162J39368_1000056 3300002737 Bacteria 146755
5 JGI25162J39368_1001137 3300002737 Bacteria 16000
6 JGI25157J39369_1002845 3300002741 Bacteria 3907
7 JGI25165J46597_1000669 3300003214 Bacteria 27650
8 JGI25153J46596_10008689 3300003215 Bacteria 4824
9 rootH1_10009206 3300003316 Bacteria 8141
10 rootH2_10003831 3300003320 Bacteria 43674
11 rootH2_10011870 3300003320 Bacteria 37797
12 rootH2_10018581 3300003320 Bacteria 12410
13 rootH2_10057371 3300003320 Bacteria 7483
14 rootH2_10229935 3300003320 Bacteria 4945
15 rootL2_10013689 3300003322 Bacteria 3671
16 rootL2_10036829 3300003322 Bacteria 5426
17 rootL2_10042845 3300003322 Bacteria 10085
18 rootL2_10072237 3300003322 Bacteria 6385
19 rootH1_10002072 3300003323 Bacteria 48496
20 rootH1_10005159 3300003323 Bacteria 13842
21 JGI25160J50197_1000800 3300003354 Bacteria 16955
22 JGI25160J50197_1004107 3300003354 Bacteria 6344
23 Ga0055542_1001954 3300003762 Bacteria 8019
24 Ga0055526_1008571 3300003771 Bacteria 5070
25 Ga0055536_1000009 3300003781 Bacteria 311572
26 Ga0055528_1001292 3300003790 Bacteria 15732
27 Ga0055530_10007155 3300003791 Bacteria 4776
28 Ga0055531_10000141 3300003794 Bacteria 82592
29 Ga0065165_1000493 3300005262 Bacteria 60949
30 Ga0065165_1008650 3300005262 Bacteria 4717
31 Ga0065714_10002216 3300005288 Bacteria 50392
32 Ga0065714_10008237 3300005288 Bacteria 7979
33 Ga0065704_10000356 3300005289 Bacteria 57976
34 Ga0070666_10023097 3300005335 Unclassified 4045
35 Ga0070659_100018809 3300005366 Bacteria 5216
36 Ga0068853_100011032 3300005539 Bacteria 7328
37 Ga0070665_100000041 3300005548 Bacteria 297849
38 Ga0068855_100061042 3300005563 Bacteria 4405
39 Ga0068857_100124534 3300005577 Bacteria 2322
40 Ga0068856_100075603 3300005614 Bacteria 3336
41 Ga0068860_100000137 3300005843 Bacteria 119626
42 Ga0075366_10007195 3300006195 Bacteria 6132
43 Ga0105240_10000044 3300009093 Bacteria 250257
44 Ga0105240_10000054 3300009093 Bacteria 225529
45 Ga0105240_10000424 3300009093 Bacteria 78228
46 Ga0105240_10009778 3300009093 Bacteria 13539
47 Ga0105240_10015558 3300009093 Bacteria 10340
48 Ga0105240_10049392 3300009093 Bacteria 5310
49 Ga0105243_10000074 3300009148 Bacteria 112549
50 Ga0105241_10006411 3300009174 Bacteria 8674
51 Ga0105241_10098883 3300009174 Bacteria 2316
52 Ga0105248_10000085 3300009177 Bacteria 108204
53 Ga0105237_10000059 3300009545 Bacteria 146569
54 Ga0105237_10000065 3300009545 Bacteria 139423
55 Ga0105237_10001742 3300009545 Bacteria 28101
56 Ga0105237_10003233 3300009545 Bacteria 19486
57 Ga0105237_10012099 3300009545 Bacteria 9109
58 Ga0105238_10022176 3300009551 Bacteria 6476
59 Ga0105238_10047283 3300009551 Bacteria 4340
60 Ga0105239_10000049 3300010375 Bacteria 177578
61 Ga0105239_10000146 3300010375 Bacteria 101177
62 Ga0105239_10000355 3300010375 Bacteria 67024
63 Ga0105239_10008549 3300010375 Bacteria 11624
64 Ga0105239_10055436 3300010375 Bacteria 4347
65 Ga0157373_10000312 3300013100 Bacteria 39303
66 Ga0157373_10004838 3300013100 Bacteria 10132
67 Ga0157373_10016110 3300013100 Bacteria 5456
68 Ga0157371_10000051 3300013102 Bacteria 180272
69 Ga0157371_10002647 3300013102 Bacteria 16981
70 Ga0157371_10003746 3300013102 Bacteria 13612
71 Ga0157370_10018671 3300013104 Bacteria 6972
72 Ga0157370_10035928 3300013104 Bacteria 4812
73 Ga0157370_10144881 3300013104 Bacteria 2212
74 Ga0157369_10000002 3300013105 Bacteria 524510
75 Ga0157374_10000004 3300013296 Bacteria 759774
76 Ga0157378_10038171 3300013297 Bacteria 4256
77 Ga0163162_10006018 3300013306 Bacteria 11743
78 Ga0163162_10022463 3300013306 Bacteria 6215
79 Ga0157372_10001731 3300013307 Bacteria 23669
80 Ga0157372_10005184 3300013307 Bacteria 13859
81 Ga0182008_10000012 3300014497 Bacteria 297475
82 Ga0182008_10000491 3300014497 Bacteria 29764
83 Ga0157376_10000690 3300014969 Bacteria 21813
84 Ga0157376_10004888 3300014969 Bacteria 9338
85 Ga0182006_1000159 3300015261 Bacteria 72265
86 Ga0182007_10000001 3300015262 Bacteria 1127301
87 Ga0182005_1001901 3300015265 Bacteria 7913
88 Ga0163161_10002105 3300017792 Bacteria 14405
89 Ga0163161_10044754 3300017792 Bacteria 3189
90 Ga0163161_10072101 3300017792 Bacteria 2529
91 Ga0207427_100060 3300025231 Bacteria 186274
92 Ga0209437_100021 3300025233 Bacteria 646400
93 Ga0209437_100124 3300025233 Bacteria 199789
94 Ga0209258_100303 3300025242 Bacteria 79506
95 Ga0209646_1000005 3300025246 Bacteria 717627
96 Ga0209026_1000371 3300025250 Bacteria 41375
97 Ga0209148_1000329 3300025254 Bacteria 65492
98 Ga0209233_1000035 3300025261 Bacteria 568478
99 Ga0209233_1002317 3300025261 Bacteria 7097
100 Ga0209673_1000517 3300025273 Bacteria 63164
101 Ga0209676_1000001 3300025292 Bacteria 1852142
102 Ga0209564_1001840 3300025295 Bacteria 19415
103 Ga0209758_1002123 3300025297 Bacteria 20929
104 Ga0209758_1008288 3300025297 Bacteria 6791
105 Ga0209050_1000018 3300025298 Bacteria 723263
106 Ga0209050_1001531 3300025298 Bacteria 24311
107 Ga0207426_1000002 3300025302 Bacteria 1249660
108 Ga0207426_1000150 3300025302 Bacteria 186352
109 Ga0207426_1007371 3300025302 Bacteria 4614
110 Ga0209257_1000064 3300025304 Bacteria 356803
111 Ga0209257_1002201 3300025304 Bacteria 20163
112 Ga0209257_1015200 3300025304 Bacteria 3226
113 Ga0207680_10018299 3300025903 Unclassified 3721
114 Ga0207647_10000249 3300025904 Bacteria 44055
115 Ga0207654_10012424 3300025911 Bacteria 4364
116 Ga0207654_10064154 3300025911 Bacteria 2158
117 Ga0207695_10000013 3300025913 Bacteria 821265
118 Ga0207695_10000043 3300025913 Bacteria 444585
119 Ga0207695_10000394 3300025913 Bacteria 98403
120 Ga0207695_10000546 3300025913 Bacteria 78237
121 Ga0207671_10000064 3300025914 Bacteria 169693
122 Ga0207671_10000378 3300025914 Bacteria 63134
123 Ga0207671_10006998 3300025914 Bacteria 9893
124 Ga0207671_10010960 3300025914 Bacteria 7427
125 Ga0207671_10012951 3300025914 Bacteria 6675
126 Ga0207709_10000033 3300025935 Bacteria 320483
127 Ga0207711_10000563 3300025941 Bacteria 37793
128 Ga0207667_10026512 3300025949 Bacteria 6330
129 Ga0207702_10049111 3300026078 Bacteria 3560
130 Ga0268266_10000014 3300028379 Bacteria 644033
131 Ga0268264_10000189 3300028381 Bacteria 128203
132 Ga0307517_10007805 3300028786 Bacteria 15517
133 Ga0307515_10001172 3300028794 Bacteria 59936
134 Ga0307515_10002462 3300028794 Bacteria 40261
135 Ga0316183_1212383 3300030742 Bacteria 20019
136 Ga0316181_1002348 3300030744 Bacteria 17767
137 Ga0307405_10000003 3300031731 Bacteria 569064
138 Ga0307407_10000008 3300031903 Bacteria 191228
139 Ga0307412_10000049 3300031911 Bacteria 151588
140 Ga0307416_100000009 3300032002 Bacteria 374271
141 Ga0307414_10002659 3300032004 Bacteria 9399
142 Ga0307414_10003841 3300032004 Bacteria 8081
143 Ga0307510_10007695 3300033180 Bacteria 12846
144 Ga0451807_0194039 3300041486 Bacteria 1592
145 Ga0466972_0000027 3300044658 Bacteria 174082
146 Ga0466972_0003236 3300044658 Bacteria 8075
147 Ga0466970_0000097 3300044765 Bacteria 37675
148 Ga0451576_0000043 3300045051 Bacteria 335666
149 Ga0495650_0000277 3300046471 Bacteria 98027
150 Ga0495585_0000088 3300046492 Bacteria 96490
151 Ga0495585_0004492 3300046492 Bacteria 9035
152 Ga0495606_0000033 3300046507 Bacteria 247739
153 Ga0495606_0005248 3300046507 Bacteria 12494
154 Ga0495606_0021445 3300046507 Bacteria 4732
155 Ga0495610_0003991 3300046512 Bacteria 11143
156 Ga0495616_0004096 3300046513 Bacteria 9246
157 Ga0495648_0002896 3300046524 Bacteria 15432
158 Ga0495633_0005822 3300046558 Bacteria 7430
159 Ga0495668_0000643 3300046616 Bacteria 42003
160 Ga0495611_0000595 3300046648 Bacteria 20863
161 Ga0495625_0000048 3300046660 Bacteria 198976
162 Ga0495625_0001376 3300046660 Bacteria 29917
163 Ga0495625_0008419 3300046660 Bacteria 8807
164 Ga0495661_0006014 3300046665 Bacteria 8563
165 Ga0495661_0018833 3300046665 Bacteria 4533
166 Ga0495649_0000059 3300046694 Bacteria 98956
167 Ga0495660_0012319 3300046810 Bacteria 4961
168 Ga0495687_001023 3300047443 Bacteria 27860
169 Ga0495686_0000402 3300047472 Bacteria 68501
170 Ga0496116_0001239 3300048919 Bacteria 29627
171 Ga0496116_0017319 3300048919 Bacteria 5595
172 Ga0496117_0002226 3300048920 Bacteria 25072
173 Ga0496117_0012833 3300048920 Bacteria 7348
174 Ga0496118_0010445 3300048921 Bacteria 9196
175 Ga0496118_0011872 3300048921 Bacteria 8440
176 Ga0496119_0018295 3300048922 Bacteria 5227
177 Ga0496121_0000028 3300048924 Bacteria 439193
178 Ga0496124_0141284 3300048927 Bacteria 1900
179 Ga0496125_0000029 3300048928 Bacteria 382675
180 Ga0496126_0039977 3300048929 Bacteria 4349
181 Ga0496126_0152498 3300048929 Bacteria 1980
182 Ga0495678_004209 3300049459 Bacteria 8456
183 nmdc:mga0k408_439_c1 3300050493 Bacteria 12343
184 Ga0500562_010583 3300053108 Bacteria 2340
185 Ga0500608_000586 3300053122 Bacteria 13374
186 Ga0500618_000023 3300053125 Bacteria 152444
187 Ga0500658_0008376 3300053134 Bacteria 3822
188 Ga0500577_0000863 3300053142 Bacteria 7834
189 Ga0500604_0021425 3300053151 Bacteria 1827
190 Ga0500616_0005489 3300053153 Bacteria 8604
191 Ga0500622_0000409 3300053156 Bacteria 40793
192 Ga0500622_0000731 3300053156 Bacteria 28694
193 Ga0500622_0008401 3300053156 Bacteria 5778

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300041486 Ga0451807_0194039 Ga0451807_0194039_75_1565 491
2 3300048921 Ga0496118_0011872 Ga0496118_0011872_5648_7516 520
3 3300025941 Ga0207711_10000563 Ga0207711_1000056313 525
4 3300009177 Ga0105248_10000085 Ga0105248_100000859 531
5 iso_pu_bacteria 2675902999 2676201822 531
6 iso_pu_bacteria 2773857921 2774846398 531
7 3300048919 Ga0496116_0001239 Ga0496116_0001239_26617_28449 541
8 3300048920 Ga0496117_0012833 Ga0496117_0012833_943_2775 541
9 3300048921 Ga0496118_0010445 Ga0496118_0010445_1241_3073 541
10 3300048922 Ga0496119_0018295 Ga0496119_0018295_2610_4442 541
11 3300045051 Ga0451576_0000043 Ga0451576_0000043_47478_49277 545
12 3300044658 Ga0466972_0000027 Ga0466972_0000027_25630_27294 551
13 3300044765 Ga0466970_0000097 Ga0466970_0000097_12545_14209 551
14 3300048927 Ga0496124_0141284 Ga0496124_0141284_56_1714 551
15 3300048929 Ga0496126_0152498 Ga0496126_0152498_270_1946 551
16 iso_pu_bacteria 2517572101 2517759525 551
17 iso_pu_bacteria 8002784119 8002789425 553
18 iso_pu_bacteria 8002775197 8002777240 555
19 3300003320 rootH2_10003831 rootH2_100038319 559
20 3300053151 Ga0500604_0021425 Ga0500604_0021425_56_1738 559
21 iso_pu_bacteria 2508501039 2508676840 559
22 iso_pu_bacteria 2687453737 2689960762 564
23 3300013296 Ga0157374_10000004 Ga0157374_10000004544 565
24 3300014969 Ga0157376_10000690 Ga0157376_1000069014 565
25 3300053108 Ga0500562_010583 Ga0500562_010583_17_1738 565
26 3300009148 Ga0105243_10000074 Ga0105243_1000007471 575
27 3300009545 Ga0105237_10001742 Ga0105237_100017428 576
28 3300025914 Ga0207671_10006998 Ga0207671_100069985 576
29 3300053156 Ga0500622_0008401 Ga0500622_0008401_3031_4785 581
30 3300003320 rootH2_10229935 rootH2_102299354 583
31 3300025935 Ga0207709_10000033 Ga0207709_1000003325 583
32 3300053156 Ga0500622_0000731 Ga0500622_0000731_23160_24989 583
33 3300048928 Ga0496125_0000029 Ga0496125_0000029_174029_175897 584
34 3300014497 Ga0182008_10000491 Ga0182008_1000049115 588
35 3300013297 Ga0157378_10038171 Ga0157378_100381711 589
36 3300003323 rootH1_10002072 rootH1_100020726 591
37 iso_pu_bacteria 2818991440 2819562798 591
38 iso_pu_bacteria 2904463128 2904463408 591
39 3300031731 Ga0307405_10000003 Ga0307405_1000000334 592
40 3300003322 rootL2_10042845 rootL2_100428458 593
41 3300009545 Ga0105237_10012099 Ga0105237_100120994 593
42 3300013100 Ga0157373_10004838 Ga0157373_100048386 593
43 3300013104 Ga0157370_10035928 Ga0157370_100359283 593
44 3300013105 Ga0157369_10000002 Ga0157369_10000002298 593
45 3300015262 Ga0182007_10000001 Ga0182007_10000001473 593
46 3300025304 Ga0209257_1015200 Ga0209257_10152002 593
47 3300013102 Ga0157371_10000051 Ga0157371_1000005168 594
48 3300017792 Ga0163161_10002105 Ga0163161_100021056 594
49 3300031911 Ga0307412_10000049 Ga0307412_10000049157 594
50 3300032004 Ga0307414_10002659 Ga0307414_100026598 594
51 3300046665 Ga0495661_0006014 Ga0495661_0006014_6637_8427 594
52 3300003320 rootH2_10018581 rootH2_100185817 596
53 3300003354 JGI25160J50197_1000800 JGI25160J50197_10008002 596
54 3300025302 Ga0207426_1000002 Ga0207426_1000002465 596
55 3300053153 Ga0500616_0005489 Ga0500616_0005489_1075_2952 596
56 iso_pu_bacteria 2821136567 2821139679 596
57 iso_pu_bacteria 2842903701 2842903779 596
58 iso_pu_bacteria 2904467357 2904473569 596
59 iso_pu_bacteria 2929921140 2929927789 596
60 3300009093 Ga0105240_10000424 Ga0105240_1000042446 597
61 3300009545 Ga0105237_10000059 Ga0105237_1000005923 597
62 3300014969 Ga0157376_10004888 Ga0157376_100048883 597
63 3300025913 Ga0207695_10000546 Ga0207695_1000054646 597
64 3300025914 Ga0207671_10000064 Ga0207671_1000006410 597
65 iso_pu_bacteria 2599185184 2599478948 597
66 iso_pu_bacteria 2721755487 2722729958 597
67 iso_pu_bacteria 2904780799 2904783042 597
68 iso_pu_bacteria 2911138879 2911141997 597
69 iso_pu_bacteria 2919177583 2919179784 597
70 iso_pu_bacteria 2928078545 2928082735 597
71 iso_pu_bacteria 2928147474 2928153042 597
72 iso_pu_bacteria 2932082852 2932086102 597
73 3300002737 JGI25162J39368_1001137 JGI25162J39368_100113713 598
74 3300003214 JGI25165J46597_1000669 JGI25165J46597_10006692 598
75 3300003323 rootH1_10005159 rootH1_100051595 598
76 3300025231 Ga0207427_100060 Ga0207427_10006092 598
77 3300025233 Ga0209437_100021 Ga0209437_100021488 598
78 3300025261 Ga0209233_1000035 Ga0209233_1000035150 598
79 iso_pu_bacteria 2842722452 2842724987 598
80 iso_pu_bacteria 2842909656 2842914151 598
81 iso_pu_bacteria 2954016120 2954016820 598
82 iso_pu_bacteria 8003151029 8003151647 598
83 3300001979 JGI24740J21852_10000520 JGI24740J21852_100005204 599
84 3300003320 rootH2_10011870 rootH2_100118703 599
85 3300009093 Ga0105240_10015558 Ga0105240_100155582 599
86 iso_pu_bacteria 2818991437 2819546140 599
87 iso_pu_bacteria 2818991442 2819577406 599
88 iso_pu_bacteria 2929239360 2929245599 599
89 iso_pu_bacteria 2945997725 2945999822 599
90 3300002737 JGI25162J39368_1000056 JGI25162J39368_100005624 600
91 3300002741 JGI25157J39369_1002845 JGI25157J39369_10028452 600
92 3300003215 JGI25153J46596_10008689 JGI25153J46596_100086895 600
93 3300003771 Ga0055526_1008571 Ga0055526_10085715 600
94 3300003790 Ga0055528_1001292 Ga0055528_100129215 600
95 3300003791 Ga0055530_10007155 Ga0055530_100071552 600
96 3300005262 Ga0065165_1000493 Ga0065165_100049342 600
97 3300005366 Ga0070659_100018809 Ga0070659_1000188093 600
98 3300005843 Ga0068860_100000137 Ga0068860_10000013773 600
99 3300009093 Ga0105240_10000044 Ga0105240_10000044104 600
100 3300009093 Ga0105240_10009778 Ga0105240_100097788 600
101 3300009093 Ga0105240_10049392 Ga0105240_100493923 600
102 3300009174 Ga0105241_10006411 Ga0105241_1000641110 600
103 3300009545 Ga0105237_10000065 Ga0105237_1000006528 600
104 3300009551 Ga0105238_10022176 Ga0105238_100221767 600
105 3300009551 Ga0105238_10047283 Ga0105238_100472832 600
106 3300010375 Ga0105239_10000355 Ga0105239_1000035522 600
107 3300013102 Ga0157371_10002647 Ga0157371_1000264711 600
108 3300013306 Ga0163162_10006018 Ga0163162_100060184 600
109 3300013307 Ga0157372_10005184 Ga0157372_1000518411 600
110 3300025233 Ga0209437_100124 Ga0209437_10012427 600
111 3300025246 Ga0209646_1000005 Ga0209646_1000005389 600
112 3300025250 Ga0209026_1000371 Ga0209026_10003717 600
113 3300025261 Ga0209233_1002317 Ga0209233_10023173 600
114 3300025273 Ga0209673_1000517 Ga0209673_10005175 600
115 3300025295 Ga0209564_1001840 Ga0209564_100184014 600
116 3300025297 Ga0209758_1002123 Ga0209758_100212311 600
117 3300025297 Ga0209758_1008288 Ga0209758_10082887 600
118 3300025298 Ga0209050_1001531 Ga0209050_10015318 600
119 3300025304 Ga0209257_1002201 Ga0209257_100220111 600
120 3300025904 Ga0207647_10000249 Ga0207647_100002495 600
121 3300025911 Ga0207654_10012424 Ga0207654_100124244 600
122 3300025913 Ga0207695_10000013 Ga0207695_10000013578 600
123 3300025913 Ga0207695_10000394 Ga0207695_1000039419 600
124 3300025914 Ga0207671_10000378 Ga0207671_1000037826 600
125 3300028381 Ga0268264_10000189 Ga0268264_1000018915 600
126 3300030742 Ga0316183_1212383 Ga0316183_121238319 600
127 3300030744 Ga0316181_1002348 Ga0316181_100234812 600
128 3300044658 Ga0466972_0003236 Ga0466972_0003236_5304_7115 600
129 3300048924 Ga0496121_0000028 Ga0496121_0000028_225255_227069 600
130 iso_pu_bacteria 2904445276 2904446423 600
131 3300002067 JGI24735J21928_10000016 JGI24735J21928_1000001670 601
132 3300003316 rootH1_10009206 rootH1_100092063 601
133 3300005563 Ga0068855_100061042 Ga0068855_1000610423 601
134 3300005577 Ga0068857_100124534 Ga0068857_1001245342 601
135 3300005614 Ga0068856_100075603 Ga0068856_1000756032 601
136 3300013306 Ga0163162_10022463 Ga0163162_100224632 601
137 3300025302 Ga0207426_1007371 Ga0207426_10073713 601
138 3300025949 Ga0207667_10026512 Ga0207667_100265123 601
139 3300026078 Ga0207702_10049111 Ga0207702_100491112 601
140 3300046471 Ga0495650_0000277 Ga0495650_0000277_25804_27615 601
141 3300046492 Ga0495585_0000088 Ga0495585_0000088_89415_91226 601
142 3300046507 Ga0495606_0000033 Ga0495606_0000033_96803_98614 601
143 3300046507 Ga0495606_0021445 Ga0495606_0021445_905_2716 601
144 3300046512 Ga0495610_0003991 Ga0495610_0003991_7228_9039 601
145 3300046513 Ga0495616_0004096 Ga0495616_0004096_3392_5203 601
146 3300046660 Ga0495625_0000048 Ga0495625_0000048_26721_28532 601
147 3300046665 Ga0495661_0018833 Ga0495661_0018833_1739_3550 601
148 3300046694 Ga0495649_0000059 Ga0495649_0000059_70435_72246 601
149 3300046810 Ga0495660_0012319 Ga0495660_0012319_2825_4636 601
150 3300047443 Ga0495687_001023 Ga0495687_001023_3580_5391 601
151 3300048919 Ga0496116_0017319 Ga0496116_0017319_3574_5382 601
152 3300048920 Ga0496117_0002226 Ga0496117_0002226_7012_8820 601
153 3300053156 Ga0500622_0000409 Ga0500622_0000409_4453_6282 601
154 iso_pu_bacteria 2919437846 2919443150 601
155 3300003320 rootH2_10057371 rootH2_100573712 602
156 3300005288 Ga0065714_10002216 Ga0065714_1000221623 602
157 3300005548 Ga0070665_100000041 Ga0070665_10000004112 602
158 3300009093 Ga0105240_10000054 Ga0105240_1000005471 602
159 3300009174 Ga0105241_10098883 Ga0105241_100988831 602
160 3300009545 Ga0105237_10003233 Ga0105237_100032332 602
161 3300010375 Ga0105239_10000049 Ga0105239_10000049119 602
162 3300010375 Ga0105239_10000146 Ga0105239_1000014641 602
163 3300013100 Ga0157373_10016110 Ga0157373_100161102 602
164 3300013307 Ga0157372_10001731 Ga0157372_1000173122 602
165 3300015261 Ga0182006_1000159 Ga0182006_100015930 602
166 3300025911 Ga0207654_10064154 Ga0207654_100641542 602
167 3300025913 Ga0207695_10000043 Ga0207695_10000043228 602
168 3300025914 Ga0207671_10010960 Ga0207671_100109605 602
169 3300025914 Ga0207671_10012951 Ga0207671_100129514 602
170 3300028379 Ga0268266_10000014 Ga0268266_10000014183 602
171 3300031903 Ga0307407_10000008 Ga0307407_10000008131 602
172 3300032002 Ga0307416_100000009 Ga0307416_10000000964 602
173 3300032004 Ga0307414_10003841 Ga0307414_100038417 602
174 3300033180 Ga0307510_10007695 Ga0307510_100076956 602
175 3300047472 Ga0495686_0000402 Ga0495686_0000402_45446_47260 602
176 3300003322 rootL2_10013689 rootL2_100136892 603
177 3300003781 Ga0055536_1000009 Ga0055536_10000095 603
178 3300006195 Ga0075366_10007195 Ga0075366_100071952 603
179 3300010375 Ga0105239_10055436 Ga0105239_100554363 603
180 3300013104 Ga0157370_10144881 Ga0157370_101448811 603
181 3300015265 Ga0182005_1001901 Ga0182005_10019014 603
182 3300017792 Ga0163161_10044754 Ga0163161_100447542 603
183 3300017792 Ga0163161_10072101 Ga0163161_100721012 603
184 3300025292 Ga0209676_1000001 Ga0209676_10000011339 603
185 3300025298 Ga0209050_1000018 Ga0209050_1000018244 603
186 3300028786 Ga0307517_10007805 Ga0307517_1000780512 603
187 3300028794 Ga0307515_10001172 Ga0307515_1000117210 603
188 3300046492 Ga0495585_0004492 Ga0495585_0004492_251_2068 603
189 3300046524 Ga0495648_0002896 Ga0495648_0002896_280_2097 603
190 3300046558 Ga0495633_0005822 Ga0495633_0005822_3278_5095 603
191 3300046616 Ga0495668_0000643 Ga0495668_0000643_264_2081 603
192 3300046660 Ga0495625_0001376 Ga0495625_0001376_5441_7264 603
193 3300046660 Ga0495625_0008419 Ga0495625_0008419_229_2046 603
194 3300048929 Ga0496126_0039977 Ga0496126_0039977_1880_3706 603
195 3300050493 nmdc:mga0k408_439_c1 nmdc:mga0k408_439_c1_1642_3465 603
196 3300053125 Ga0500618_000023 Ga0500618_000023_12016_13833 603
197 3300053134 Ga0500658_0008376 Ga0500658_0008376_1332_3149 603
198 3300053142 Ga0500577_0000863 Ga0500577_0000863_369_2186 603
199 3300003322 rootL2_10036829 rootL2_100368293 604
200 3300003322 rootL2_10072237 rootL2_100722372 604
201 3300003794 Ga0055531_10000141 Ga0055531_1000014149 604
202 3300005288 Ga0065714_10008237 Ga0065714_100082373 604
203 3300005289 Ga0065704_10000356 Ga0065704_1000035618 604
204 3300025304 Ga0209257_1000064 Ga0209257_1000064243 604
205 3300046507 Ga0495606_0005248 Ga0495606_0005248_8571_10391 604
206 3300046648 Ga0495611_0000595 Ga0495611_0000595_14553_16373 604
207 3300049459 Ga0495678_004209 Ga0495678_004209_184_2004 604
208 3300005539 Ga0068853_100011032 Ga0068853_1000110323 605
209 3300014497 Ga0182008_10000012 Ga0182008_10000012134 605
210 3300003354 JGI25160J50197_1004107 JGI25160J50197_10041075 606
211 3300005262 Ga0065165_1008650 Ga0065165_10086502 606
212 3300010375 Ga0105239_10008549 Ga0105239_100085495 606
213 3300025302 Ga0207426_1000150 Ga0207426_100015092 606
214 3300053122 Ga0500608_000586 Ga0500608_000586_8331_10283 606
215 iso_pu_bacteria 2738541302 2738856686 606
216 3300003762 Ga0055542_1001954 Ga0055542_10019548 607
217 3300005335 Ga0070666_10023097 Ga0070666_100230972 607
218 3300025242 Ga0209258_100303 Ga0209258_10030331 607
219 3300025254 Ga0209148_1000329 Ga0209148_100032918 607
220 3300025903 Ga0207680_10018299 Ga0207680_100182992 607
221 3300028794 Ga0307515_10002462 Ga0307515_100024629 607
222 2162886007 SwRhRL2b_contig_1178953 SwRhRL2b_0843.00001650 608
223 3300013100 Ga0157373_10000312 Ga0157373_1000031219 608
224 3300013102 Ga0157371_10003746 Ga0157371_100037465 608
225 3300013104 Ga0157370_10018671 Ga0157370_100186715 608

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02837

Glyco_hydro_2_N

Glycosyl hydrolases family 2, sugar binding domain

141

259

0.9

PF22666

Glyco_hydro_2_N2

Glycosyl hydrolase 2 galactose-binding domain-like

137

254

0.88

PF02836

Glyco_hydro_2_C

Glycosyl hydrolases family 2, TIM barrel domain

388

521

0.81

PF00703

Glyco_hydro_2

Glycosyl hydrolases family 2

267

355

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
7sf2-assembly2.cif.gz_C crystal structure of beta-galactosidase from bacteroides cellulosilyticus 0.8824 26 602
7sf2-assembly2.cif.gz_C crystal structure of beta-galactosidase from bacteroides cellulosilyticus 0.8692 26 602
7xyr-assembly1.cif.gz_A cystal structure of beta-glucuronidase from bacteroides thetaiotaomicron 0.8362 48 599
7xyr-assembly1.cif.gz_A cystal structure of beta-glucuronidase from bacteroides thetaiotaomicron 0.8261 48 599
6jz4-assembly1.cif.gz_B b-glucuronidase from ruminococcus gnavus in complex with d-glucaro-d-lactam 0.7985 57 595
ID Description Score Start End Superfamily
3t0dA02 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8434 220 312 2.60.40.10
af_A1ZBG9_237_349_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8357 220 312 2.60.40.10
af_A0A1D6NGI9_1_90_2.60.120.260 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.8319 117 186 2.60.120.260
3ob8A02 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8312 220 312 2.60.40.10
5uj6B01 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.8121 62 218 2.60.120.260
ID Description Score Start End GO Terms
AF-A0A0J8SMP3-F1-model_v4 beta-galactosidase (EC 3.2.1.23) 0.9872 117 185 GO:0004565
GO:0005990
GO:0009341
AF-A0A191TPU3-F1-model_v4 Beta-glycosidase 0.9639 158 605 GO:0004553
GO:0005975
AF-A0A561HJ37-F1-model_v4 deleted 0.955 24 602
AF-A0A191TPU3-F1-model_v4 Beta-glycosidase 0.9473 158 605 GO:0004553
GO:0005975
AF-A0A7Y6M049-F1-model_v4 deleted 0.9365 475 602

Feature Viewer

pLDDT pTM Quality
87.21 0.88 High
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Predicted Structure (AlphaFold2)

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