F337239

General Info

Members Datasets Scaffolds Average Seq Length
224 145 448 675

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2510917020|2511122959
Length 704
Sequence LCLFMSKSFRLALAAGATLCVLPAFSPAFAGVDDDPRTALDSVLVTARPNPEDAPIVAQARKRLSETPGAVAVISSEAYANRYAIGLVDALRDVPGVFAQKKFGEDARLSIRGSGIGNSSHNRGTMLAQDGVPLNEADGYGDYQLIDPLLARYTEVYKGGNALRFGGALLGGAINFVTPTGRTAGADNLLRVEGGSFGTARVHGELARTFGDDDVFVGATLLNADGWRQQSNSSAARLSVNLGHSFGEDREVRLYLSGADLRQQIAGALTLNDALNNPTKAANYAPVNNLSNNYGRNMRNARASLQTTWRLSDSTVFQGGVYGAWRDLDHPIFQVVDQESRNFGAFGRLDWTGQLGGMDADLFAGLSWRVGDLDSRNWINLRGSHGAPTAFSRQNAQAADVFAEGRLFVTPRLALVAGGTYGTASRDYQSYKLPTGGFNLTENRDYDWFAPRLGVLFQADQDSQVFANLTRSVEPPNFGSYSPDATHPFTDLVPQTAWTGEVGARGRRGAFAWDVALYRAQLKHELLSYVVDPARPAIAFNADQTIHQGLEAGLDWRIAPRLRLRQTYAWSDFKFDGDAQYKDNRLPVVPEHLYRAELRYEHPAGWFVAPSVEWSPRGVLVDYRNKVRAPDYAIASLSAGYTRDRITVFLDARNLTDERYVSTVNPSVAATTVSTAAPGAPDNSTAAFWPGDGRGVFVGLTGKF

Samples

Sample ID Description Type Environment
1 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
4 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
5 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
6 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
7 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
13 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
14 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
15 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
16 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
17 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
18 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
19 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
20 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
22 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
23 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
24 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
25 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
26 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
27 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
28 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
29 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
30 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
31 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
32 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
34 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
35 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
37 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
52 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
53 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
54 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
55 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
56 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
57 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
58 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
59 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
60 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
61 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
62 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
63 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
64 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
65 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
66 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
67 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
68 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
69 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
70 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
71 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
72 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
73 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
74 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
75 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
76 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
77 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
78 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
79 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
80 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
81 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
82 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
83 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
84 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
85 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
86 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
90 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
91 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
92 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
93 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
94 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
95 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
96 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
97 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
98 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
99 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
100 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
101 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
102 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
103 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
104 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
105 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
106 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
107 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
108 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
109 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
110 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
111 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
112 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
113 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
114 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
115 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
116 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
117 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
118 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
119 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
120 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
121 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
122 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
123 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
124 2643221583 Caulobacter sp. Root655 Isolate Unclassified
125 2643221584 Caulobacter sp. Root656 Isolate Unclassified
126 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
127 2643221640 Caulobacter sp. Root342 Isolate Unclassified
128 2643221642 Caulobacter sp. Root343 Isolate Unclassified
129 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
130 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
131 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
132 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
133 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
134 2818991435 Caulobacter henricii 536 Isolate Unclassified
135 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
136 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
137 2849560528 Caulobacter zeae 410 Isolate Unclassified
138 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
139 2851153111 Caulobacter radicis 736 Isolate Unclassified
140 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
141 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
142 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
143 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
144 2928972540 Brevundimonas sp. 1080 Isolate Rhizosphere
145 2977240413 Brevundimonas vesicularis SORGH_AS 431 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 87.05
Metatranscriptomes 0
Isolates 12.95

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 28.12
Nodule 0
Rhizoplane 1.79
Rhizosphere 57.59
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10008745 3300003215 Bacteria 4797
2 rootL2_10014326 3300003322 Bacteria 20514
3 Ga0055537_1001491 3300003773 Bacteria 9014
4 Ga0055536_1002400 3300003781 Bacteria 10545
5 Ga0055530_10001742 3300003791 Bacteria 15258
6 Ga0055530_10002857 3300003791 Bacteria 10547
7 Ga0055531_10004854 3300003794 Bacteria 8011
8 Ga0055531_10007359 3300003794 Bacteria 6031
9 Ga0065165_1001151 3300005262 Bacteria 30932
10 Ga0065165_1001899 3300005262 Bacteria 20051
11 Ga0070670_100000007 3300005331 Bacteria 318672
12 Ga0070670_100001906 3300005331 Bacteria 17068
13 Ga0070670_100020769 3300005331 Bacteria 5646
14 Ga0070668_100000306 3300005347 Bacteria 32248
15 Ga0070668_100000566 3300005347 Bacteria 24747
16 Ga0070668_100000965 3300005347 Bacteria 20121
17 Ga0070668_100002015 3300005347 Bacteria 14857
18 Ga0070668_100020893 3300005347 Bacteria 4945
19 Ga0070667_100000611 3300005367 Bacteria 34865
20 Ga0070667_100004349 3300005367 Bacteria 11952
21 Ga0070667_100008329 3300005367 Bacteria 8592
22 Ga0070665_100000761 3300005548 Bacteria 42642
23 Ga0070665_100012672 3300005548 Bacteria 8489
24 Ga0068859_100000523 3300005617 Bacteria 38137
25 Ga0068859_100014492 3300005617 Bacteria 7915
26 Ga0068859_100041769 3300005617 Bacteria 4606
27 Ga0068864_100000128 3300005618 Bacteria 73813
28 Ga0068864_100061603 3300005618 Bacteria 3250
29 Ga0068861_100041060 3300005719 Bacteria 3464
30 Ga0068863_100000295 3300005841 Bacteria 51532
31 Ga0068863_100001844 3300005841 Bacteria 21053
32 Ga0068858_100003442 3300005842 Bacteria 15716
33 Ga0068860_100000047 3300005843 Bacteria 213287
34 Ga0068860_100004355 3300005843 Bacteria 14467
35 Ga0068860_100009333 3300005843 Bacteria 9746
36 Ga0068862_100000777 3300005844 Bacteria 31708
37 Ga0068862_100000858 3300005844 Bacteria 29795
38 Ga0068862_100018929 3300005844 Bacteria 5738
39 Ga0068862_100028046 3300005844 Bacteria 4742
40 Ga0068862_100032581 3300005844 Bacteria 4404
41 Ga0075366_10043807 3300006195 Bacteria 2652
42 Ga0097620_100000523 3300006931 Bacteria 38137
43 Ga0097620_100014493 3300006931 Bacteria 7915
44 Ga0097620_100041767 3300006931 Bacteria 4606
45 Ga0105248_10003232 3300009177 Bacteria 18071
46 Ga0105248_10015456 3300009177 Bacteria 8413
47 Ga0105248_10044193 3300009177 Bacteria 4996
48 Ga0105249_10045537 3300009553 Bacteria 3991
49 Ga0157371_10018860 3300013102 Bacteria 5096
50 Ga0157370_10010821 3300013104 Bacteria 9586
51 Ga0157369_10021583 3300013105 Bacteria 7201
52 Ga0163162_10151287 3300013306 Bacteria 2439
53 Ga0157379_10001426 3300014968 Bacteria 19628
54 Ga0157379_10009320 3300014968 Bacteria 8548
55 Ga0209026_1002175 3300025250 Bacteria 7611
56 Ga0209565_1001573 3300025263 Bacteria 9761
57 Ga0209673_1006032 3300025273 Bacteria 5956
58 Ga0209675_1008559 3300025291 Bacteria 3739
59 Ga0209676_1000169 3300025292 Bacteria 155600
60 Ga0209676_1008174 3300025292 Bacteria 4724
61 Ga0209564_1001706 3300025295 Bacteria 20761
62 Ga0209758_1002290 3300025297 Bacteria 19808
63 Ga0209758_1002829 3300025297 Bacteria 16867
64 Ga0209758_1004165 3300025297 Bacteria 12307
65 Ga0209050_1001323 3300025298 Bacteria 27642
66 Ga0209050_1001912 3300025298 Bacteria 19919
67 Ga0209256_1003936 3300025299 Bacteria 9776
68 Ga0209256_1010753 3300025299 Bacteria 3776
69 Ga0209051_1002098 3300025303 Bacteria 14987
70 Ga0209257_1000408 3300025304 Bacteria 83362
71 Ga0209257_1002066 3300025304 Bacteria 21198
72 Ga0209257_1002336 3300025304 Bacteria 19095
73 Ga0209257_1004721 3300025304 Bacteria 10201
74 Ga0207650_10000030 3300025925 Bacteria 235824
75 Ga0207650_10034772 3300025925 Bacteria 3656
76 Ga0207644_10009565 3300025931 Bacteria 6367
77 Ga0207711_10002874 3300025941 Bacteria 15093
78 Ga0207668_10000042 3300025972 Bacteria 103877
79 Ga0207668_10000230 3300025972 Bacteria 37555
80 Ga0207668_10000611 3300025972 Bacteria 22226
81 Ga0207668_10000717 3300025972 Bacteria 20280
82 Ga0207668_10014771 3300025972 Bacteria 4840
83 Ga0207658_10000417 3300025986 Bacteria 40403
84 Ga0207658_10000979 3300025986 Bacteria 23565
85 Ga0207658_10005591 3300025986 Bacteria 8597
86 Ga0207703_10001137 3300026035 Bacteria 25123
87 Ga0207703_10012975 3300026035 Bacteria 6493
88 Ga0207641_10002969 3300026088 Bacteria 15346
89 Ga0207641_10005558 3300026088 Bacteria 10744
90 Ga0207676_10044809 3300026095 Bacteria 3415
91 Ga0207675_100019846 3300026118 Bacteria 6272
92 Ga0268266_10001835 3300028379 Bacteria 24024
93 Ga0268266_10009828 3300028379 Bacteria 8409
94 Ga0268265_10000744 3300028380 Bacteria 31783
95 Ga0268265_10003013 3300028380 Bacteria 12298
96 Ga0268265_10007885 3300028380 Bacteria 7185
97 Ga0268264_10000002 3300028381 Bacteria 1153045
98 Ga0268264_10007547 3300028381 Bacteria 9075
99 Ga0307515_10008786 3300028794 Bacteria 19626
100 Ga0307515_10023938 3300028794 Bacteria 10670
101 Ga0307513_10000203 3300031456 Bacteria 85712
102 Ga0307516_10000035 3300031730 Bacteria 152658
103 Ga0307406_10000676 3300031901 Bacteria 19274
104 Ga0495627_004317 3300046453 Bacteria 5973
105 Ga0495638_0001807 3300046460 Bacteria 18608
106 Ga0495638_0002590 3300046460 Bacteria 14599
107 Ga0495638_0003390 3300046460 Bacteria 12559
108 Ga0495638_0008863 3300046460 Bacteria 7100
109 Ga0495638_0009708 3300046460 Bacteria 6727
110 Ga0495650_0000024 3300046471 Bacteria 496674
111 Ga0495585_0047357 3300046492 Bacteria 2395
112 Ga0495583_0000037 3300046506 Bacteria 244437
113 Ga0495606_0008595 3300046507 Bacteria 8832
114 Ga0495610_0000154 3300046512 Bacteria 76596
115 Ga0495610_0000983 3300046512 Bacteria 26313
116 Ga0495610_0018284 3300046512 Bacteria 3964
117 Ga0495616_0000243 3300046513 Bacteria 44198
118 Ga0495632_0003974 3300046519 Bacteria 10252
119 Ga0495637_0023318 3300046520 Bacteria 2815
120 Ga0495643_0002591 3300046522 Bacteria 14096
121 Ga0495648_0000204 3300046524 Bacteria 68918
122 Ga0495654_0000153 3300046530 Bacteria 70297
123 Ga0495597_0005233 3300046542 Bacteria 6898
124 Ga0495668_0000040 3300046616 Bacteria 230681
125 Ga0495668_0004992 3300046616 Bacteria 9172
126 Ga0495625_0000043 3300046660 Bacteria 205715
127 Ga0495625_0010733 3300046660 Bacteria 7540
128 Ga0495625_0016163 3300046660 Bacteria 5878
129 Ga0495625_0039079 3300046660 Bacteria 3467
130 Ga0495625_0046102 3300046660 Bacteria 3146
131 Ga0495669_0000012 3300046684 Bacteria 157373
132 Ga0495649_0003052 3300046694 Bacteria 11479
133 Ga0495660_0005588 3300046810 Bacteria 7525
134 Ga0495672_0005135 3300047320 Bacteria 10447
135 Ga0495679_002076 3300047446 Bacteria 10577
136 Ga0495673_0000102 3300047469 Bacteria 173343
137 Ga0495673_0001459 3300047469 Bacteria 18782
138 Ga0495673_0001481 3300047469 Bacteria 18586
139 Ga0495686_0001010 3300047472 Bacteria 34135
140 Ga0495686_0006439 3300047472 Bacteria 8991
141 Ga0495686_0007596 3300047472 Bacteria 8100
142 Ga0495686_0008146 3300047472 Bacteria 7743
143 Ga0495686_0020973 3300047472 Bacteria 4350
144 Ga0496102_0183692 3300048905 Bacteria 1970
145 Ga0496106_0011435 3300048909 Bacteria 6567
146 Ga0496107_0000029 3300048910 Bacteria 102345
147 Ga0496115_0024684 3300048918 Bacteria 4675
148 Ga0496121_0000053 3300048924 Bacteria 312611
149 Ga0496121_0005375 3300048924 Bacteria 16457
150 Ga0496124_0012321 3300048927 Bacteria 8445
151 Ga0496125_0085944 3300048928 Bacteria 2381
152 Ga0495678_000680 3300049459 Bacteria 31270
153 Ga0501032_0003465 3300049569 Bacteria 12085
154 Ga0501043_0015179 3300049579 Bacteria 6031
155 Ga0501047_0012319 3300049581 Bacteria 8094
156 Ga0501067_0005010 3300049583 Bacteria 7357
157 Ga0501073_0000013 3300049589 Bacteria 160591
158 Ga0501077_0000423 3300049593 Bacteria 25601
159 Ga0501080_0013803 3300049742 Bacteria 7435
160 Ga0501044_0019548 3300049823 Bacteria 7243
161 Ga0500635_0000085 3300053080 Bacteria 59878
162 Ga0500578_0000166 3300053086 Bacteria 78688
163 Ga0500643_001627 3300053087 Bacteria 12551
164 Ga0500643_002277 3300053087 Bacteria 10072
165 Ga0500644_0000409 3300053088 Bacteria 20278
166 Ga0500644_0001050 3300053088 Bacteria 8232
167 Ga0500566_0033859 3300053094 Bacteria 2975
168 Ga0500641_0000498 3300053096 Bacteria 14187
169 Ga0500641_0000575 3300053096 Bacteria 13249
170 Ga0500555_000712 3300053103 Bacteria 12570
171 Ga0500556_0000846 3300053104 Bacteria 17483
172 Ga0500556_0010585 3300053104 Bacteria 2711
173 Ga0500562_000630 3300053108 Bacteria 8503
174 Ga0500562_000755 3300053108 Bacteria 7866
175 Ga0500562_001352 3300053108 Bacteria 6044
176 Ga0500594_0000127 3300053118 Bacteria 21433
177 Ga0500595_004844 3300053119 Bacteria 5953
178 Ga0500608_000213 3300053122 Bacteria 23181
179 Ga0500608_002700 3300053122 Bacteria 6512
180 Ga0500618_001024 3300053125 Bacteria 14003
181 Ga0500559_0000098 3300053136 Bacteria 69305
182 Ga0500559_0009638 3300053136 Bacteria 4170
183 Ga0500564_000061 3300053138 Bacteria 29201
184 Ga0500573_0025222 3300053140 Bacteria 3418
185 Ga0500616_0008689 3300053153 Bacteria 6271
186 Ga0500616_0033439 3300053153 Bacteria 2806
187 Ga0500622_0000784 3300053156 Bacteria 27604
188 Ga0500622_0027919 3300053156 Bacteria 2973
189 Ga0500622_0037981 3300053156 Bacteria 2514
190 Ga0500627_0001741 3300053158 Bacteria 6181
191 Ga0500636_0003967 3300053177 Bacteria 8341
192 Ga0500637_0003539 3300053178 Bacteria 7239
193 Ga0500645_001848 3300053730 Bacteria 10143
194 Ga0500645_011089 3300053730 Bacteria 2955
195 Ga0500609_001211 3300053731 Bacteria 3832
196 2511122959 2510917020 Bacteria 5657507
197 2585148198 2582581279 Bacteria 4980720
198 2585155312 2582581280 Bacteria 5994497
199 2585196582 2582581293 Bacteria 5907401
200 2587917121 2585428106 Bacteria 5179711
201 2643747391 2643221545 Bacteria 5083237
202 2643778122 2643221552 Bacteria 5708754
203 2643924598 2643221583 Bacteria 5218014
204 2643928493 2643221584 Bacteria 5511711
205 2644087971 2643221614 Bacteria 4260023
206 2644223675 2643221640 Bacteria 5258820
207 2644236237 2643221642 Bacteria 5357871
208 2644344142 2643221661 Bacteria 4267604
209 2644367328 2643221666 Bacteria 4265935
210 2644507410 2643221691 Bacteria 5093099
211 2644552344 2643221699 Bacteria 5731501
212 2792459864 2791355048 Bacteria 5832535
213 2819537838 2818991435 Bacteria 5433759
214 2819648620 2818991454 Bacteria 5563326
215 2843744544 2843744320 Bacteria 5659202
216 2849565132 2849560528 Bacteria 5393480
217 2849575626 2849573788 Bacteria 5421256
218 2851156025 2851153111 Bacteria 5542585
219 2857506063 2857504554 Bacteria 5369913
220 2884963499 2884960567 Bacteria 5437054
221 2898331689 2898329390 Bacteria 5168154
222 2928532153 2928531327 Bacteria 5101314
223 2928972718 2928972540 Bacteria 3058286
224 2977242499 2977240413 Bacteria 3191065
225 JGI25153J46596_10008745
226 rootL2_10014326
227 Ga0055537_1001491
228 Ga0055536_1002400
229 Ga0055530_10001742
230 Ga0055530_10002857
231 Ga0055531_10004854
232 Ga0055531_10007359
233 Ga0065165_1001151
234 Ga0065165_1001899
235 Ga0070670_100000007
236 Ga0070670_100001906
237 Ga0070670_100020769
238 Ga0070668_100000306
239 Ga0070668_100000566
240 Ga0070668_100000965
241 Ga0070668_100002015
242 Ga0070668_100020893
243 Ga0070667_100000611
244 Ga0070667_100004349
245 Ga0070667_100008329
246 Ga0070665_100000761
247 Ga0070665_100012672
248 Ga0068859_100000523
249 Ga0068859_100014492
250 Ga0068859_100041769
251 Ga0068864_100000128
252 Ga0068864_100061603
253 Ga0068861_100041060
254 Ga0068863_100000295
255 Ga0068863_100001844
256 Ga0068858_100003442
257 Ga0068860_100000047
258 Ga0068860_100004355
259 Ga0068860_100009333
260 Ga0068862_100000777
261 Ga0068862_100000858
262 Ga0068862_100018929
263 Ga0068862_100028046
264 Ga0068862_100032581
265 Ga0075366_10043807
266 Ga0097620_100000523
267 Ga0097620_100014493
268 Ga0097620_100041767
269 Ga0105248_10003232
270 Ga0105248_10015456
271 Ga0105248_10044193
272 Ga0105249_10045537
273 Ga0157371_10018860
274 Ga0157370_10010821
275 Ga0157369_10021583
276 Ga0163162_10151287
277 Ga0157379_10001426
278 Ga0157379_10009320
279 Ga0209026_1002175
280 Ga0209565_1001573
281 Ga0209673_1006032
282 Ga0209675_1008559
283 Ga0209676_1000169
284 Ga0209676_1008174
285 Ga0209564_1001706
286 Ga0209758_1002290
287 Ga0209758_1002829
288 Ga0209758_1004165
289 Ga0209050_1001323
290 Ga0209050_1001912
291 Ga0209256_1003936
292 Ga0209256_1010753
293 Ga0209051_1002098
294 Ga0209257_1000408
295 Ga0209257_1002066
296 Ga0209257_1002336
297 Ga0209257_1004721
298 Ga0207650_10000030
299 Ga0207650_10034772
300 Ga0207644_10009565
301 Ga0207711_10002874
302 Ga0207668_10000042
303 Ga0207668_10000230
304 Ga0207668_10000611
305 Ga0207668_10000717
306 Ga0207668_10014771
307 Ga0207658_10000417
308 Ga0207658_10000979
309 Ga0207658_10005591
310 Ga0207703_10001137
311 Ga0207703_10012975
312 Ga0207641_10002969
313 Ga0207641_10005558
314 Ga0207676_10044809
315 Ga0207675_100019846
316 Ga0268266_10001835
317 Ga0268266_10009828
318 Ga0268265_10000744
319 Ga0268265_10003013
320 Ga0268265_10007885
321 Ga0268264_10000002
322 Ga0268264_10007547
323 Ga0307515_10008786
324 Ga0307515_10023938
325 Ga0307513_10000203
326 Ga0307516_10000035
327 Ga0307406_10000676
328 Ga0495627_004317
329 Ga0495638_0001807
330 Ga0495638_0002590
331 Ga0495638_0003390
332 Ga0495638_0008863
333 Ga0495638_0009708
334 Ga0495650_0000024
335 Ga0495585_0047357
336 Ga0495583_0000037
337 Ga0495606_0008595
338 Ga0495610_0000154
339 Ga0495610_0000983
340 Ga0495610_0018284
341 Ga0495616_0000243
342 Ga0495632_0003974
343 Ga0495637_0023318
344 Ga0495643_0002591
345 Ga0495648_0000204
346 Ga0495654_0000153
347 Ga0495597_0005233
348 Ga0495668_0000040
349 Ga0495668_0004992
350 Ga0495625_0000043
351 Ga0495625_0010733
352 Ga0495625_0016163
353 Ga0495625_0039079
354 Ga0495625_0046102
355 Ga0495669_0000012
356 Ga0495649_0003052
357 Ga0495660_0005588
358 Ga0495672_0005135
359 Ga0495679_002076
360 Ga0495673_0000102
361 Ga0495673_0001459
362 Ga0495673_0001481
363 Ga0495686_0001010
364 Ga0495686_0006439
365 Ga0495686_0007596
366 Ga0495686_0008146
367 Ga0495686_0020973
368 Ga0496102_0183692
369 Ga0496106_0011435
370 Ga0496107_0000029
371 Ga0496115_0024684
372 Ga0496121_0000053
373 Ga0496121_0005375
374 Ga0496124_0012321
375 Ga0496125_0085944
376 Ga0495678_000680
377 Ga0501032_0003465
378 Ga0501043_0015179
379 Ga0501047_0012319
380 Ga0501067_0005010
381 Ga0501073_0000013
382 Ga0501077_0000423
383 Ga0501080_0013803
384 Ga0501044_0019548
385 Ga0500635_0000085
386 Ga0500578_0000166
387 Ga0500643_001627
388 Ga0500643_002277
389 Ga0500644_0000409
390 Ga0500644_0001050
391 Ga0500566_0033859
392 Ga0500641_0000498
393 Ga0500641_0000575
394 Ga0500555_000712
395 Ga0500556_0000846
396 Ga0500556_0010585
397 Ga0500562_000630
398 Ga0500562_000755
399 Ga0500562_001352
400 Ga0500594_0000127
401 Ga0500595_004844
402 Ga0500608_000213
403 Ga0500608_002700
404 Ga0500618_001024
405 Ga0500559_0000098
406 Ga0500559_0009638
407 Ga0500564_000061
408 Ga0500573_0025222
409 Ga0500616_0008689
410 Ga0500616_0033439
411 Ga0500622_0000784
412 Ga0500622_0027919
413 Ga0500622_0037981
414 Ga0500627_0001741
415 Ga0500636_0003967
416 Ga0500637_0003539
417 Ga0500645_001848
418 Ga0500645_011089
419 Ga0500609_001211
420 2511122959
421 2585148198
422 2585155312
423 2585196582
424 2587917121
425 2643747391
426 2643778122
427 2643924598
428 2643928493
429 2644087971
430 2644223675
431 2644236237
432 2644344142
433 2644367328
434 2644507410
435 2644552344
436 2792459864
437 2819537838
438 2819648620
439 2843744544
440 2849565132
441 2849575626
442 2851156025
443 2857506063
444 2884963499
445 2898331689
446 2928532153
447 2928972718
448 2977242499

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07715

Plug

TonB-dependent Receptor Plug Domain

63

173

0.95

PF00593

TonB_dep_Rec_b-barrel

TonB dependent receptor-like, beta-barrel

241

655

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
6v81-assembly1.cif.gz_A the crystal structure of the outer-membrane transporter yncd 0.8423 23 624
6v81-assembly1.cif.gz_A the crystal structure of the outer-membrane transporter yncd 0.8132 23 624
1kmp-assembly1.cif.gz_A crystal structure of the outer membrane transporter feca complexed with ferric citrate 0.7999 24 624
4cu4-assembly1.cif.gz_A fhua from e. coli in complex with the lasso peptide microcin j25 (mccj25) 0.7794 52 624
1kmp-assembly1.cif.gz_A crystal structure of the outer membrane transporter feca complexed with ferric citrate 0.7713 24 624
ID Description Score Start End Superfamily
af_P76115_176_696_2.40.170.20 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8522 158 622 2.40.170.20
1fi1A02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.7653 145 624 2.40.170.20
af_P76115_176_696_2.40.170.20 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.7644 158 622 2.40.170.20
1kmpA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.7599 145 624 2.40.170.20
1xkwA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.7594 143 624 2.40.170.20
ID Description Score Start End GO Terms
AF-A0A1E4NQX7-F1-model_v4 TonB-dependent receptor 0.881 24 624 GO:0009279
AF-A0A2V7GV02-F1-model_v4 TonB-dependent receptor 0.874 103 622 GO:0009279
AF-A0A257LXL5-F1-model_v4 Uncharacterized protein 0.8685 13 493 GO:0009279
GO:0015344
AF-A0A4Q5S2I9-F1-model_v4 TonB-dependent receptor 0.8681 24 624 GO:0009279
GO:0015344
AF-A0A1Z4BPA9-F1-model_v4 TonB-dependent receptor 0.8634 13 624 GO:0009279
GO:0015344

Map