F337137
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 224 | 133 | 224 | 445 |
Family's Representative Sequence
| Representative Sequence | 3300048917|Ga0496114_0140469|Ga0496114_0140469_106_1620 |
| Length | 504 |
| Sequence | MAMAGVSAARKAAFSILLAVERGAGHSDDLLRGNAVSALSPADRHLATALVLGVLRWQIQLDLSLRKFLSRPNAKLETEVLIALRLGAFQLLHLDRIPARAAVDESVELTRQAGHHYASRMVNAVLRKLAQGSRDQSVDPGLKGADSRPIIPAPANKGSLRVTEGLALKGHDFSRADPGAKSTRALAPEGNCLPAIAAHPQWMVERWAAFFGTDTVRAICIHNQEQPCMTIRVAAPEVESDLANSGILLEAGALLTAARTVVSGDITATDAFREARIRIQDEGSQLVAEIAALASRGSARTERILDACAAPGGKTLILAERNPQARIVACEANPKRLESLRERLAPFGDRIDCRLADATALSFDSEFDVVLADVPCSGTGTLSRNPEIRHRLRSEDLPRQAERQRAILSSALRAVRPGGRVVYSTCSLEPEENEHVVAAVLAQTEGAAIVSAGAALDALRERGILAGEAPERLRTCLTPEGFLRLVPGAFPTDGFFIAIIETKH |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 2 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 3 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 5 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 7 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 8 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 9 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 18 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 19 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 20 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 21 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 22 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 25 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 26 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 27 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 28 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 29 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 30 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 31 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 32 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 33 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 34 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 35 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 36 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 37 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 39 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 40 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 41 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 90 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 93 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 94 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 95 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 96 | 3300030878 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 97 | 3300031235 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG | Metagenome | Rhizosphere |
| 98 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 99 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 100 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 101 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 102 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 103 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 104 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 105 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 106 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 107 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 108 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 109 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 110 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 111 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 112 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 122 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 123 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 124 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 125 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 126 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 127 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 128 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 129 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 130 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 131 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 133 | 3300055283 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 99.55 |
| Metatranscriptomes | 0.45 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.34 |
| Nodule | 0 |
| Rhizoplane | 1.79 |
| Rhizosphere | 95.09 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 1.79 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | rootH2_10202240 | 3300003320 | Bacteria | 3071 |
| 2 | rootH2_10326065 | 3300003320 | Unclassified | 1540 |
| 3 | Ga0065707_10001067 | 3300005295 | Bacteria | 13664 |
| 4 | Ga0070658_10046458 | 3300005327 | Bacteria | 3513 |
| 5 | Ga0070683_100001167 | 3300005329 | Bacteria | 19904 |
| 6 | Ga0070683_100002912 | 3300005329 | Bacteria | 13711 |
| 7 | Ga0070683_100020419 | 3300005329 | Bacteria | 5895 |
| 8 | Ga0070670_100010791 | 3300005331 | Bacteria | 7803 |
| 9 | Ga0068869_100000942 | 3300005334 | Bacteria | 16836 |
| 10 | Ga0070680_100063811 | 3300005336 | Bacteria | 3018 |
| 11 | Ga0068868_100013761 | 3300005338 | Bacteria | 5944 |
| 12 | Ga0070660_100003927 | 3300005339 | Bacteria | 10276 |
| 13 | Ga0070661_100033565 | 3300005344 | Bacteria | 3718 |
| 14 | Ga0070661_100113905 | 3300005344 | Bacteria | 2021 |
| 15 | Ga0070668_100192743 | 3300005347 | Bacteria | 1670 |
| 16 | Ga0070671_100048754 | 3300005355 | Bacteria | 3523 |
| 17 | Ga0070673_100018718 | 3300005364 | Bacteria | 4956 |
| 18 | Ga0070659_100015961 | 3300005366 | Bacteria | 5632 |
| 19 | Ga0070667_100004496 | 3300005367 | Bacteria | 11766 |
| 20 | Ga0070714_100033743 | 3300005435 | Bacteria | 4281 |
| 21 | Ga0070713_100013030 | 3300005436 | Bacteria | 6124 |
| 22 | Ga0070713_100125733 | 3300005436 | Bacteria | 2255 |
| 23 | Ga0070681_10009602 | 3300005458 | Bacteria | 9513 |
| 24 | Ga0070681_10029260 | 3300005458 | Bacteria | 5530 |
| 25 | Ga0070679_100000717 | 3300005530 | Bacteria | 28561 |
| 26 | Ga0070679_100010623 | 3300005530 | Bacteria | 8737 |
| 27 | Ga0070684_100005071 | 3300005535 | Bacteria | 10060 |
| 28 | Ga0070684_100007752 | 3300005535 | Bacteria | 8369 |
| 29 | Ga0070684_100049290 | 3300005535 | Bacteria | 3655 |
| 30 | Ga0068853_100000512 | 3300005539 | Bacteria | 26297 |
| 31 | Ga0070672_100009395 | 3300005543 | Bacteria | 6740 |
| 32 | Ga0070665_100086316 | 3300005548 | Bacteria | 3143 |
| 33 | Ga0068855_100016829 | 3300005563 | Bacteria | 8794 |
| 34 | Ga0068857_100021936 | 3300005577 | Bacteria | 5621 |
| 35 | Ga0068854_100027907 | 3300005578 | Bacteria | 3894 |
| 36 | Ga0068856_100005713 | 3300005614 | Bacteria | 12251 |
| 37 | Ga0068856_100014367 | 3300005614 | Bacteria | 7654 |
| 38 | Ga0068856_100076241 | 3300005614 | Bacteria | 3322 |
| 39 | Ga0068856_100131103 | 3300005614 | Bacteria | 2511 |
| 40 | Ga0068856_100132210 | 3300005614 | Bacteria | 2500 |
| 41 | Ga0068852_100000095 | 3300005616 | Bacteria | 59631 |
| 42 | Ga0068852_100028947 | 3300005616 | Unclassified | 4542 |
| 43 | Ga0068852_100072304 | 3300005616 | Unclassified | 3031 |
| 44 | Ga0068852_100095807 | 3300005616 | Bacteria | 2666 |
| 45 | Ga0068859_100010731 | 3300005617 | Bacteria | 9219 |
| 46 | Ga0068851_10007873 | 3300005834 | Bacteria | 4905 |
| 47 | Ga0068851_10080270 | 3300005834 | Bacteria | 1702 |
| 48 | Ga0068863_100002734 | 3300005841 | Bacteria | 17441 |
| 49 | Ga0068858_100000841 | 3300005842 | Bacteria | 31803 |
| 50 | Ga0068860_100001780 | 3300005843 | Bacteria | 22937 |
| 51 | Ga0068862_100021633 | 3300005844 | Bacteria | 5377 |
| 52 | Ga0081540_1003532 | 3300005983 | Bacteria | 12320 |
| 53 | Ga0070717_10002283 | 3300006028 | Bacteria | 13442 |
| 54 | Ga0097621_100003470 | 3300006237 | Bacteria | 10869 |
| 55 | Ga0068871_100005207 | 3300006358 | Bacteria | 9092 |
| 56 | Ga0068871_100102882 | 3300006358 | Bacteria | 2394 |
| 57 | Ga0075428_100000010 | 3300006844 | Bacteria | 213631 |
| 58 | Ga0075431_100067943 | 3300006847 | Bacteria | 3679 |
| 59 | Ga0097620_100010731 | 3300006931 | Bacteria | 9219 |
| 60 | Ga0105240_10001167 | 3300009093 | Bacteria | 46058 |
| 61 | Ga0105240_10004689 | 3300009093 | Bacteria | 20669 |
| 62 | Ga0105240_10007154 | 3300009093 | Bacteria | 16258 |
| 63 | Ga0105240_10114530 | 3300009093 | Bacteria | 3257 |
| 64 | Ga0111539_10000001 | 3300009094 | Bacteria | 1035431 |
| 65 | Ga0105245_10009911 | 3300009098 | Bacteria | 8298 |
| 66 | Ga0105245_10013450 | 3300009098 | Bacteria | 7128 |
| 67 | Ga0105247_10009974 | 3300009101 | Bacteria | 5752 |
| 68 | Ga0105241_10000014 | 3300009174 | Bacteria | 171306 |
| 69 | Ga0105241_10002060 | 3300009174 | Bacteria | 15191 |
| 70 | Ga0105241_10009235 | 3300009174 | Bacteria | 7252 |
| 71 | Ga0105241_10073252 | 3300009174 | Bacteria | 2664 |
| 72 | Ga0105241_10135827 | 3300009174 | Bacteria | 1997 |
| 73 | Ga0105248_10044927 | 3300009177 | Bacteria | 4954 |
| 74 | Ga0105248_10076652 | 3300009177 | Bacteria | 3758 |
| 75 | Ga0105237_10084168 | 3300009545 | Bacteria | 3171 |
| 76 | Ga0105238_10000658 | 3300009551 | Bacteria | 36203 |
| 77 | Ga0105238_10009529 | 3300009551 | Bacteria | 9720 |
| 78 | Ga0105238_10131944 | 3300009551 | Unclassified | 2476 |
| 79 | Ga0105238_10194038 | 3300009551 | Bacteria | 2006 |
| 80 | Ga0105239_10002219 | 3300010375 | Bacteria | 24922 |
| 81 | Ga0105239_10013129 | 3300010375 | Bacteria | 9204 |
| 82 | Ga0105246_10001710 | 3300011119 | Bacteria | 13105 |
| 83 | Ga0157369_10018391 | 3300013105 | Bacteria | 7835 |
| 84 | Ga0157369_10030376 | 3300013105 | Bacteria | 5959 |
| 85 | Ga0157374_10002719 | 3300013296 | Bacteria | 14857 |
| 86 | Ga0157374_10134197 | 3300013296 | Bacteria | 2398 |
| 87 | Ga0157378_10129860 | 3300013297 | Unclassified | 2331 |
| 88 | Ga0163162_10004608 | 3300013306 | Bacteria | 13286 |
| 89 | Ga0157372_10002651 | 3300013307 | Bacteria | 19391 |
| 90 | Ga0157372_10009747 | 3300013307 | Bacteria | 10216 |
| 91 | Ga0157372_10037650 | 3300013307 | Bacteria | 5337 |
| 92 | Ga0157375_10009399 | 3300013308 | Bacteria | 8583 |
| 93 | Ga0157375_10019853 | 3300013308 | Bacteria | 6126 |
| 94 | Ga0163163_10001566 | 3300014325 | Bacteria | 19297 |
| 95 | Ga0163163_10107255 | 3300014325 | Bacteria | 2819 |
| 96 | Ga0157380_10022314 | 3300014326 | Bacteria | 4763 |
| 97 | Ga0157376_10040555 | 3300014969 | Bacteria | 3806 |
| 98 | Ga0157376_10044590 | 3300014969 | Bacteria | 3646 |
| 99 | Ga0157376_10050439 | 3300014969 | Unclassified | 3453 |
| 100 | Ga0157376_10051183 | 3300014969 | Bacteria | 3430 |
| 101 | Ga0207710_10001958 | 3300025900 | Bacteria | 9844 |
| 102 | Ga0207647_10010949 | 3300025904 | Bacteria | 6379 |
| 103 | Ga0207654_10000018 | 3300025911 | Bacteria | 173245 |
| 104 | Ga0207654_10000559 | 3300025911 | Bacteria | 21075 |
| 105 | Ga0207707_10037199 | 3300025912 | Unclassified | 4252 |
| 106 | Ga0207695_10000539 | 3300025913 | Bacteria | 78884 |
| 107 | Ga0207695_10000825 | 3300025913 | Bacteria | 57395 |
| 108 | Ga0207695_10000942 | 3300025913 | Bacteria | 51840 |
| 109 | Ga0207695_10011694 | 3300025913 | Bacteria | 10605 |
| 110 | Ga0207671_10000207 | 3300025914 | Bacteria | 88886 |
| 111 | Ga0207671_10000211 | 3300025914 | Bacteria | 88074 |
| 112 | Ga0207671_10028122 | 3300025914 | Bacteria | 4203 |
| 113 | Ga0207660_10115280 | 3300025917 | Unclassified | 2028 |
| 114 | Ga0207649_10022436 | 3300025920 | Bacteria | 3647 |
| 115 | Ga0207652_10007237 | 3300025921 | Bacteria | 8942 |
| 116 | Ga0207652_10026204 | 3300025921 | Bacteria | 4854 |
| 117 | Ga0207694_10000118 | 3300025924 | Bacteria | 83927 |
| 118 | Ga0207694_10000823 | 3300025924 | Bacteria | 27668 |
| 119 | Ga0207687_10059575 | 3300025927 | Bacteria | 2690 |
| 120 | Ga0207700_10032817 | 3300025928 | Bacteria | 3708 |
| 121 | Ga0207664_10037869 | 3300025929 | Bacteria | 3735 |
| 122 | Ga0207691_10014464 | 3300025940 | Bacteria | 7523 |
| 123 | Ga0207711_10147086 | 3300025941 | Bacteria | 2123 |
| 124 | Ga0207689_10000639 | 3300025942 | Bacteria | 33456 |
| 125 | Ga0207661_10020722 | 3300025944 | Bacteria | 4919 |
| 126 | Ga0207679_10013863 | 3300025945 | Bacteria | 5285 |
| 127 | Ga0207667_10002340 | 3300025949 | Bacteria | 23738 |
| 128 | Ga0207667_10003842 | 3300025949 | Bacteria | 18465 |
| 129 | Ga0207667_10022457 | 3300025949 | Bacteria | 6970 |
| 130 | Ga0207640_10117222 | 3300025981 | Bacteria | 1900 |
| 131 | Ga0207677_10003199 | 3300026023 | Bacteria | 8638 |
| 132 | Ga0207639_10000063 | 3300026041 | Bacteria | 100309 |
| 133 | Ga0207639_10001850 | 3300026041 | Bacteria | 14229 |
| 134 | Ga0207678_10001656 | 3300026067 | Bacteria | 20421 |
| 135 | Ga0207702_10003431 | 3300026078 | Bacteria | 14477 |
| 136 | Ga0207702_10004553 | 3300026078 | Bacteria | 12288 |
| 137 | Ga0207702_10065098 | 3300026078 | Bacteria | 3121 |
| 138 | Ga0207702_10269942 | 3300026078 | Bacteria | 1604 |
| 139 | Ga0207641_10003572 | 3300026088 | Bacteria | 13744 |
| 140 | Ga0207674_10004642 | 3300026116 | Bacteria | 16498 |
| 141 | Ga0207683_10001872 | 3300026121 | Bacteria | 18606 |
| 142 | Ga0207698_10000093 | 3300026142 | Bacteria | 57865 |
| 143 | Ga0207698_10056799 | 3300026142 | Bacteria | 3023 |
| 144 | Ga0207698_10072824 | 3300026142 | Bacteria | 2733 |
| 145 | Ga0207428_10000002 | 3300027907 | Bacteria | 854851 |
| 146 | Ga0268265_10009643 | 3300028380 | Bacteria | 6519 |
| 147 | Ga0268265_10014315 | 3300028380 | Bacteria | 5402 |
| 148 | Ga0268264_10018806 | 3300028381 | Bacteria | 5649 |
| 149 | Ga0265334_10012223 | 3300028573 | Bacteria | 3608 |
| 150 | Ga0265318_10007462 | 3300028577 | Bacteria | 4943 |
| 151 | Ga0265323_10045875 | 3300028653 | Bacteria | 1569 |
| 152 | Ga0265338_10001423 | 3300028800 | Bacteria | 38881 |
| 153 | Ga0265338_10011838 | 3300028800 | Bacteria | 10024 |
| 154 | Ga0265338_10032424 | 3300028800 | Bacteria | 5096 |
| 155 | Ga0265770_1002201 | 3300030878 | Bacteria | 2653 |
| 156 | Ga0265330_10000087 | 3300031235 | Bacteria | 78938 |
| 157 | Ga0265330_10000262 | 3300031235 | Bacteria | 38790 |
| 158 | Ga0265330_10015911 | 3300031235 | Bacteria | 3476 |
| 159 | Ga0265332_10010448 | 3300031238 | Bacteria | 4131 |
| 160 | Ga0265328_10000958 | 3300031239 | Bacteria | 13239 |
| 161 | Ga0265328_10001785 | 3300031239 | Bacteria | 9809 |
| 162 | Ga0265328_10007232 | 3300031239 | Bacteria | 4641 |
| 163 | Ga0265320_10005314 | 3300031240 | Bacteria | 8288 |
| 164 | Ga0265325_10000064 | 3300031241 | Bacteria | 73859 |
| 165 | Ga0265325_10000211 | 3300031241 | Bacteria | 41520 |
| 166 | Ga0265325_10049046 | 3300031241 | Unclassified | 2181 |
| 167 | Ga0265340_10000225 | 3300031247 | Bacteria | 28840 |
| 168 | Ga0265340_10024153 | 3300031247 | Bacteria | 3089 |
| 169 | Ga0265339_10000031 | 3300031249 | Bacteria | 133838 |
| 170 | Ga0265339_10000268 | 3300031249 | Bacteria | 42009 |
| 171 | Ga0265339_10003292 | 3300031249 | Bacteria | 11308 |
| 172 | Ga0265339_10009425 | 3300031249 | Bacteria | 6140 |
| 173 | Ga0265339_10012259 | 3300031249 | Bacteria | 5241 |
| 174 | Ga0265339_10030117 | 3300031249 | Unclassified | 3075 |
| 175 | Ga0265316_10000355 | 3300031344 | Bacteria | 51585 |
| 176 | Ga0265316_10001405 | 3300031344 | Bacteria | 25891 |
| 177 | Ga0265316_10002301 | 3300031344 | Bacteria | 19963 |
| 178 | Ga0265316_10007823 | 3300031344 | Bacteria | 10006 |
| 179 | Ga0265316_10009803 | 3300031344 | Bacteria | 8794 |
| 180 | Ga0265316_10048400 | 3300031344 | Unclassified | 3356 |
| 181 | Ga0265316_10105659 | 3300031344 | Bacteria | 2136 |
| 182 | Ga0265316_10110853 | 3300031344 | Bacteria | 2078 |
| 183 | Ga0265313_10000834 | 3300031595 | Bacteria | 31104 |
| 184 | Ga0265313_10003790 | 3300031595 | Bacteria | 11990 |
| 185 | Ga0265314_10000067 | 3300031711 | Bacteria | 156225 |
| 186 | Ga0265314_10001292 | 3300031711 | Bacteria | 28401 |
| 187 | Ga0265314_10012255 | 3300031711 | Bacteria | 7014 |
| 188 | Ga0265314_10053229 | 3300031711 | Unclassified | 2808 |
| 189 | Ga0265342_10000067 | 3300031712 | Bacteria | 111040 |
| 190 | Ga0265342_10002534 | 3300031712 | Bacteria | 15718 |
| 191 | Ga0265342_10002750 | 3300031712 | Bacteria | 14948 |
| 192 | Ga0265342_10003163 | 3300031712 | Bacteria | 13714 |
| 193 | Ga0265342_10039143 | 3300031712 | Bacteria | 2882 |
| 194 | Ga0307409_100130406 | 3300031995 | Unclassified | 2147 |
| 195 | Ga0307510_10093310 | 3300033180 | Bacteria | 2842 |
| 196 | Ga0466963_0003591 | 3300044694 | Bacteria | 8916 |
| 197 | Ga0466967_0010770 | 3300045976 | Bacteria | 6876 |
| 198 | Ga0495629_0021039 | 3300046459 | Bacteria | 4655 |
| 199 | Ga0495629_0030240 | 3300046459 | Unclassified | 3841 |
| 200 | Ga0495650_0000022 | 3300046471 | Bacteria | 530747 |
| 201 | Ga0495580_0054393 | 3300046472 | Unclassified | 2824 |
| 202 | Ga0495645_0014305 | 3300046543 | Bacteria | 5627 |
| 203 | Ga0495625_0000852 | 3300046660 | Bacteria | 41618 |
| 204 | Ga0495625_0017254 | 3300046660 | Bacteria | 5653 |
| 205 | Ga0495613_0038368 | 3300046689 | Unclassified | 3551 |
| 206 | Ga0495613_0066266 | 3300046689 | Bacteria | 2638 |
| 207 | Ga0495672_0000953 | 3300047320 | Bacteria | 30158 |
| 208 | Ga0495686_0000833 | 3300047472 | Bacteria | 39658 |
| 209 | Ga0495602_0127649 | 3300048088 | Bacteria | 2034 |
| 210 | Ga0496105_0007132 | 3300048908 | Bacteria | 8621 |
| 211 | Ga0496107_0053996 | 3300048910 | Bacteria | 2899 |
| 212 | Ga0496114_0013414 | 3300048917 | Bacteria | 6571 |
| 213 | Ga0496114_0140469 | 3300048917 | Unclassified | 2091 |
| 214 | Ga0496126_0000020 | 3300048929 | Bacteria | 490805 |
| 215 | Ga0501036_0115399 | 3300049572 | Bacteria | 2269 |
| 216 | Ga0501041_0080547 | 3300049577 | Bacteria | 2005 |
| 217 | Ga0501074_0105763 | 3300049590 | Bacteria | 2014 |
| 218 | Ga0501076_0123844 | 3300049592 | Bacteria | 2094 |
| 219 | nmdc:mga06r32_46173_c1 | 3300050510 | Bacteria | 4156 |
| 220 | nmdc:mga08y16_3_c1 | 3300050511 | Bacteria | 936907 |
| 221 | Ga0495601_0105855 | 3300053077 | Bacteria | 1819 |
| 222 | Ga0500595_000004 | 3300053119 | Bacteria | 410922 |
| 223 | Ga0500595_013708 | 3300053119 | Bacteria | 3100 |
| 224 | Ga0500661_000729 | 3300055283 | Bacteria | 6153 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300055283 | Ga0500661_000729 | Ga0500661_000729_4169_5263 | 345 |
| 2 | 3300047320 | Ga0495672_0000953 | Ga0495672_0000953_23558_24802 | 385 |
| 3 | 3300047472 | Ga0495686_0000833 | Ga0495686_0000833_22157_23398 | 391 |
| 4 | 3300033180 | Ga0307510_10093310 | Ga0307510_100933102 | 393 |
| 5 | 3300005436 | Ga0070713_100125733 | Ga0070713_1001257332 | 394 |
| 6 | 3300046471 | Ga0495650_0000022 | Ga0495650_0000022_148864_150129 | 394 |
| 7 | 3300053119 | Ga0500595_013708 | Ga0500595_013708_493_1749 | 394 |
| 8 | 3300005366 | Ga0070659_100015961 | Ga0070659_1000159615 | 395 |
| 9 | 3300003320 | rootH2_10326065 | rootH2_103260651 | 396 |
| 10 | 3300005530 | Ga0070679_100000717 | Ga0070679_1000007178 | 396 |
| 11 | 3300025921 | Ga0207652_10026204 | Ga0207652_100262042 | 396 |
| 12 | 3300046660 | Ga0495625_0000852 | Ga0495625_0000852_22848_24122 | 396 |
| 13 | 3300053119 | Ga0500595_000004 | Ga0500595_000004_304417_305688 | 396 |
| 14 | 3300005327 | Ga0070658_10046458 | Ga0070658_100464583 | 397 |
| 15 | 3300009093 | Ga0105240_10114530 | Ga0105240_101145303 | 397 |
| 16 | 3300026067 | Ga0207678_10001656 | Ga0207678_1000165617 | 397 |
| 17 | 3300046660 | Ga0495625_0017254 | Ga0495625_0017254_3714_5000 | 397 |
| 18 | 3300048929 | Ga0496126_0000020 | Ga0496126_0000020_330573_331937 | 398 |
| 19 | 3300025949 | Ga0207667_10022457 | Ga0207667_100224573 | 405 |
| 20 | 3300005436 | Ga0070713_100013030 | Ga0070713_1000130304 | 408 |
| 21 | 3300025928 | Ga0207700_10032817 | Ga0207700_100328172 | 408 |
| 22 | 3300009093 | Ga0105240_10004689 | Ga0105240_1000468919 | 409 |
| 23 | 3300049590 | Ga0501074_0105763 | Ga0501074_0105763_271_1596 | 410 |
| 24 | 3300025920 | Ga0207649_10022436 | Ga0207649_100224364 | 412 |
| 25 | 3300025929 | Ga0207664_10037869 | Ga0207664_100378692 | 414 |
| 26 | 3300005331 | Ga0070670_100010791 | Ga0070670_1000107918 | 418 |
| 27 | 3300025945 | Ga0207679_10013863 | Ga0207679_100138635 | 418 |
| 28 | 3300014969 | Ga0157376_10044590 | Ga0157376_100445903 | 419 |
| 29 | 3300031995 | Ga0307409_100130406 | Ga0307409_1001304062 | 419 |
| 30 | 3300046459 | Ga0495629_0021039 | Ga0495629_0021039_668_2008 | 419 |
| 31 | 3300048908 | Ga0496105_0007132 | Ga0496105_0007132_5742_7082 | 419 |
| 32 | 3300048910 | Ga0496107_0053996 | Ga0496107_0053996_1387_2727 | 419 |
| 33 | 3300049572 | Ga0501036_0115399 | Ga0501036_0115399_36_1388 | 419 |
| 34 | 3300049577 | Ga0501041_0080547 | Ga0501041_0080547_638_1990 | 419 |
| 35 | 3300049592 | Ga0501076_0123844 | Ga0501076_0123844_459_1811 | 419 |
| 36 | 3300005295 | Ga0065707_10001067 | Ga0065707_100010676 | 420 |
| 37 | 3300006844 | Ga0075428_100000010 | Ga0075428_10000001028 | 420 |
| 38 | 3300006847 | Ga0075431_100067943 | Ga0075431_1000679432 | 420 |
| 39 | 3300009094 | Ga0111539_10000001 | Ga0111539_10000001173 | 420 |
| 40 | 3300014326 | Ga0157380_10022314 | Ga0157380_100223142 | 420 |
| 41 | 3300027907 | Ga0207428_10000002 | Ga0207428_10000002185 | 420 |
| 42 | 3300028380 | Ga0268265_10009643 | Ga0268265_100096435 | 420 |
| 43 | 3300031239 | Ga0265328_10001785 | Ga0265328_1000178510 | 420 |
| 44 | 3300031249 | Ga0265339_10000031 | Ga0265339_1000003173 | 420 |
| 45 | 3300031344 | Ga0265316_10110853 | Ga0265316_101108532 | 420 |
| 46 | 3300031712 | Ga0265342_10003163 | Ga0265342_100031637 | 420 |
| 47 | 3300050510 | nmdc:mga06r32_46173_c1 | nmdc:mga06r32_46173_c1_520_1875 | 420 |
| 48 | 3300050511 | nmdc:mga08y16_3_c1 | nmdc:mga08y16_3_c1_201489_202844 | 420 |
| 49 | 3300005614 | Ga0068856_100132210 | Ga0068856_1001322103 | 421 |
| 50 | 3300005616 | Ga0068852_100095807 | Ga0068852_1000958073 | 421 |
| 51 | 3300026142 | Ga0207698_10072824 | Ga0207698_100728243 | 421 |
| 52 | 3300013296 | Ga0157374_10002719 | Ga0157374_100027196 | 422 |
| 53 | 3300013296 | Ga0157374_10134197 | Ga0157374_101341973 | 426 |
| 54 | 3300005344 | Ga0070661_100113905 | Ga0070661_1001139052 | 427 |
| 55 | 3300005347 | Ga0070668_100192743 | Ga0070668_1001927432 | 427 |
| 56 | 3300005364 | Ga0070673_100018718 | Ga0070673_1000187184 | 427 |
| 57 | 3300005535 | Ga0070684_100049290 | Ga0070684_1000492903 | 427 |
| 58 | 3300005543 | Ga0070672_100009395 | Ga0070672_1000093953 | 427 |
| 59 | 3300005548 | Ga0070665_100086316 | Ga0070665_1000863162 | 427 |
| 60 | 3300006358 | Ga0068871_100102882 | Ga0068871_1001028822 | 427 |
| 61 | 3300009098 | Ga0105245_10013450 | Ga0105245_100134506 | 427 |
| 62 | 3300009545 | Ga0105237_10084168 | Ga0105237_100841682 | 427 |
| 63 | 3300014325 | Ga0163163_10107255 | Ga0163163_101072553 | 427 |
| 64 | 3300014969 | Ga0157376_10040555 | Ga0157376_100405554 | 427 |
| 65 | 3300025904 | Ga0207647_10010949 | Ga0207647_100109496 | 427 |
| 66 | 3300025940 | Ga0207691_10014464 | Ga0207691_100144647 | 427 |
| 67 | 3300025941 | Ga0207711_10147086 | Ga0207711_101470862 | 427 |
| 68 | 3300025981 | Ga0207640_10117222 | Ga0207640_101172222 | 427 |
| 69 | 3300026121 | Ga0207683_10001872 | Ga0207683_1000187212 | 427 |
| 70 | 3300046459 | Ga0495629_0030240 | Ga0495629_0030240_1990_3309 | 427 |
| 71 | 3300046472 | Ga0495580_0054393 | Ga0495580_0054393_805_2124 | 427 |
| 72 | 3300046543 | Ga0495645_0014305 | Ga0495645_0014305_615_1934 | 427 |
| 73 | 3300046689 | Ga0495613_0038368 | Ga0495613_0038368_1710_3029 | 427 |
| 74 | 3300048088 | Ga0495602_0127649 | Ga0495602_0127649_282_1601 | 427 |
| 75 | 3300053077 | Ga0495601_0105855 | Ga0495601_0105855_119_1438 | 427 |
| 76 | 3300006028 | Ga0070717_10002283 | Ga0070717_1000228310 | 428 |
| 77 | 3300005539 | Ga0068853_100000512 | Ga0068853_1000005122 | 429 |
| 78 | 3300005563 | Ga0068855_100016829 | Ga0068855_1000168299 | 429 |
| 79 | 3300005614 | Ga0068856_100014367 | Ga0068856_1000143675 | 429 |
| 80 | 3300005616 | Ga0068852_100000095 | Ga0068852_10000009520 | 429 |
| 81 | 3300009093 | Ga0105240_10007154 | Ga0105240_100071548 | 429 |
| 82 | 3300009174 | Ga0105241_10002060 | Ga0105241_100020603 | 429 |
| 83 | 3300009177 | Ga0105248_10044927 | Ga0105248_100449272 | 429 |
| 84 | 3300009551 | Ga0105238_10000658 | Ga0105238_1000065816 | 429 |
| 85 | 3300010375 | Ga0105239_10002219 | Ga0105239_1000221913 | 429 |
| 86 | 3300013105 | Ga0157369_10030376 | Ga0157369_100303764 | 429 |
| 87 | 3300013307 | Ga0157372_10002651 | Ga0157372_100026519 | 429 |
| 88 | 3300025911 | Ga0207654_10000559 | Ga0207654_1000055914 | 429 |
| 89 | 3300025913 | Ga0207695_10000539 | Ga0207695_1000053957 | 429 |
| 90 | 3300025913 | Ga0207695_10000942 | Ga0207695_1000094214 | 429 |
| 91 | 3300025914 | Ga0207671_10000207 | Ga0207671_1000020740 | 429 |
| 92 | 3300025924 | Ga0207694_10000118 | Ga0207694_1000011832 | 429 |
| 93 | 3300025949 | Ga0207667_10003842 | Ga0207667_100038429 | 429 |
| 94 | 3300026041 | Ga0207639_10000063 | Ga0207639_1000006344 | 429 |
| 95 | 3300026078 | Ga0207702_10004553 | Ga0207702_100045536 | 429 |
| 96 | 3300026142 | Ga0207698_10000093 | Ga0207698_1000009320 | 429 |
| 97 | 3300031239 | Ga0265328_10007232 | Ga0265328_100072323 | 429 |
| 98 | 3300031249 | Ga0265339_10003292 | Ga0265339_1000329210 | 429 |
| 99 | 3300031344 | Ga0265316_10002301 | Ga0265316_1000230115 | 429 |
| 100 | 3300031711 | Ga0265314_10012255 | Ga0265314_100122557 | 429 |
| 101 | 3300005435 | Ga0070714_100033743 | Ga0070714_1000337433 | 431 |
| 102 | 3300005458 | Ga0070681_10029260 | Ga0070681_100292602 | 431 |
| 103 | 3300005834 | Ga0068851_10080270 | Ga0068851_100802702 | 431 |
| 104 | 3300005329 | Ga0070683_100001167 | Ga0070683_10000116716 | 432 |
| 105 | 3300005329 | Ga0070683_100002912 | Ga0070683_10000291210 | 432 |
| 106 | 3300005334 | Ga0068869_100000942 | Ga0068869_10000094216 | 432 |
| 107 | 3300005338 | Ga0068868_100013761 | Ga0068868_1000137615 | 432 |
| 108 | 3300005344 | Ga0070661_100033565 | Ga0070661_1000335653 | 432 |
| 109 | 3300005355 | Ga0070671_100048754 | Ga0070671_1000487543 | 432 |
| 110 | 3300005367 | Ga0070667_100004496 | Ga0070667_1000044964 | 432 |
| 111 | 3300005535 | Ga0070684_100005071 | Ga0070684_1000050713 | 432 |
| 112 | 3300005577 | Ga0068857_100021936 | Ga0068857_1000219363 | 432 |
| 113 | 3300005578 | Ga0068854_100027907 | Ga0068854_1000279072 | 432 |
| 114 | 3300005614 | Ga0068856_100005713 | Ga0068856_10000571312 | 432 |
| 115 | 3300005614 | Ga0068856_100076241 | Ga0068856_1000762413 | 432 |
| 116 | 3300005616 | Ga0068852_100072304 | Ga0068852_1000723041 | 432 |
| 117 | 3300005617 | Ga0068859_100010731 | Ga0068859_1000107318 | 432 |
| 118 | 3300005834 | Ga0068851_10007873 | Ga0068851_100078734 | 432 |
| 119 | 3300005841 | Ga0068863_100002734 | Ga0068863_10000273416 | 432 |
| 120 | 3300005842 | Ga0068858_100000841 | Ga0068858_10000084110 | 432 |
| 121 | 3300005843 | Ga0068860_100001780 | Ga0068860_10000178017 | 432 |
| 122 | 3300005844 | Ga0068862_100021633 | Ga0068862_1000216337 | 432 |
| 123 | 3300006237 | Ga0097621_100003470 | Ga0097621_1000034702 | 432 |
| 124 | 3300006358 | Ga0068871_100005207 | Ga0068871_1000052078 | 432 |
| 125 | 3300006931 | Ga0097620_100010731 | Ga0097620_1000107318 | 432 |
| 126 | 3300009093 | Ga0105240_10001167 | Ga0105240_1000116721 | 432 |
| 127 | 3300009098 | Ga0105245_10009911 | Ga0105245_100099115 | 432 |
| 128 | 3300009101 | Ga0105247_10009974 | Ga0105247_100099746 | 432 |
| 129 | 3300009174 | Ga0105241_10000014 | Ga0105241_10000014136 | 432 |
| 130 | 3300009174 | Ga0105241_10009235 | Ga0105241_100092353 | 432 |
| 131 | 3300009174 | Ga0105241_10073252 | Ga0105241_100732523 | 432 |
| 132 | 3300009177 | Ga0105248_10076652 | Ga0105248_100766523 | 432 |
| 133 | 3300009551 | Ga0105238_10009529 | Ga0105238_1000952910 | 432 |
| 134 | 3300010375 | Ga0105239_10013129 | Ga0105239_100131295 | 432 |
| 135 | 3300011119 | Ga0105246_10001710 | Ga0105246_100017104 | 432 |
| 136 | 3300013105 | Ga0157369_10018391 | Ga0157369_100183914 | 432 |
| 137 | 3300013297 | Ga0157378_10129860 | Ga0157378_101298602 | 432 |
| 138 | 3300013306 | Ga0163162_10004608 | Ga0163162_1000460810 | 432 |
| 139 | 3300013307 | Ga0157372_10009747 | Ga0157372_100097479 | 432 |
| 140 | 3300013308 | Ga0157375_10009399 | Ga0157375_100093996 | 432 |
| 141 | 3300014325 | Ga0163163_10001566 | Ga0163163_1000156612 | 432 |
| 142 | 3300014969 | Ga0157376_10051183 | Ga0157376_100511833 | 432 |
| 143 | 3300025900 | Ga0207710_10001958 | Ga0207710_1000195810 | 432 |
| 144 | 3300025911 | Ga0207654_10000018 | Ga0207654_10000018138 | 432 |
| 145 | 3300025913 | Ga0207695_10000825 | Ga0207695_1000082545 | 432 |
| 146 | 3300025914 | Ga0207671_10000211 | Ga0207671_1000021149 | 432 |
| 147 | 3300025924 | Ga0207694_10000823 | Ga0207694_1000082323 | 432 |
| 148 | 3300025927 | Ga0207687_10059575 | Ga0207687_100595753 | 432 |
| 149 | 3300025942 | Ga0207689_10000639 | Ga0207689_1000063914 | 432 |
| 150 | 3300025944 | Ga0207661_10020722 | Ga0207661_100207224 | 432 |
| 151 | 3300026023 | Ga0207677_10003199 | Ga0207677_100031993 | 432 |
| 152 | 3300026078 | Ga0207702_10003431 | Ga0207702_100034312 | 432 |
| 153 | 3300026078 | Ga0207702_10065098 | Ga0207702_100650983 | 432 |
| 154 | 3300026088 | Ga0207641_10003572 | Ga0207641_1000357212 | 432 |
| 155 | 3300026116 | Ga0207674_10004642 | Ga0207674_1000464215 | 432 |
| 156 | 3300028380 | Ga0268265_10014315 | Ga0268265_100143152 | 432 |
| 157 | 3300028381 | Ga0268264_10018806 | Ga0268264_100188064 | 432 |
| 158 | 3300030878 | Ga0265770_1002201 | Ga0265770_10022012 | 432 |
| 159 | 3300044694 | Ga0466963_0003591 | Ga0466963_0003591_5918_7252 | 432 |
| 160 | 3300045976 | Ga0466967_0010770 | Ga0466967_0010770_2777_4111 | 432 |
| 161 | 3300009174 | Ga0105241_10135827 | Ga0105241_101358272 | 434 |
| 162 | 3300009551 | Ga0105238_10131944 | Ga0105238_101319443 | 434 |
| 163 | 3300013308 | Ga0157375_10019853 | Ga0157375_100198537 | 434 |
| 164 | 3300014969 | Ga0157376_10050439 | Ga0157376_100504392 | 434 |
| 165 | 3300025914 | Ga0207671_10028122 | Ga0207671_100281222 | 434 |
| 166 | 3300026041 | Ga0207639_10001850 | Ga0207639_100018505 | 434 |
| 167 | 3300026142 | Ga0207698_10056799 | Ga0207698_100567992 | 434 |
| 168 | 3300028653 | Ga0265323_10045875 | Ga0265323_100458751 | 434 |
| 169 | 3300031235 | Ga0265330_10015911 | Ga0265330_100159111 | 434 |
| 170 | 3300031344 | Ga0265316_10009803 | Ga0265316_100098034 | 434 |
| 171 | 3300031712 | Ga0265342_10002534 | Ga0265342_100025343 | 434 |
| 172 | 3300046689 | Ga0495613_0066266 | Ga0495613_0066266_1175_2515 | 434 |
| 173 | 3300048917 | Ga0496114_0013414 | Ga0496114_0013414_516_1856 | 434 |
| 174 | 3300005983 | Ga0081540_1003532 | Ga0081540_10035328 | 435 |
| 175 | 3300005329 | Ga0070683_100020419 | Ga0070683_1000204192 | 436 |
| 176 | 3300005535 | Ga0070684_100007752 | Ga0070684_1000077527 | 436 |
| 177 | 3300005336 | Ga0070680_100063811 | Ga0070680_1000638112 | 437 |
| 178 | 3300005339 | Ga0070660_100003927 | Ga0070660_1000039274 | 437 |
| 179 | 3300005458 | Ga0070681_10009602 | Ga0070681_100096026 | 437 |
| 180 | 3300005530 | Ga0070679_100010623 | Ga0070679_1000106234 | 437 |
| 181 | 3300005614 | Ga0068856_100131103 | Ga0068856_1001311032 | 437 |
| 182 | 3300005616 | Ga0068852_100028947 | Ga0068852_1000289473 | 437 |
| 183 | 3300009551 | Ga0105238_10194038 | Ga0105238_101940382 | 437 |
| 184 | 3300013307 | Ga0157372_10037650 | Ga0157372_100376504 | 437 |
| 185 | 3300025912 | Ga0207707_10037199 | Ga0207707_100371995 | 437 |
| 186 | 3300025913 | Ga0207695_10011694 | Ga0207695_1001169413 | 437 |
| 187 | 3300025917 | Ga0207660_10115280 | Ga0207660_101152802 | 437 |
| 188 | 3300025921 | Ga0207652_10007237 | Ga0207652_100072376 | 437 |
| 189 | 3300025949 | Ga0207667_10002340 | Ga0207667_1000234016 | 437 |
| 190 | 3300026078 | Ga0207702_10269942 | Ga0207702_102699421 | 437 |
| 191 | 3300028573 | Ga0265334_10012223 | Ga0265334_100122232 | 437 |
| 192 | 3300028577 | Ga0265318_10007462 | Ga0265318_100074626 | 437 |
| 193 | 3300028800 | Ga0265338_10001423 | Ga0265338_1000142326 | 437 |
| 194 | 3300028800 | Ga0265338_10011838 | Ga0265338_100118388 | 437 |
| 195 | 3300028800 | Ga0265338_10032424 | Ga0265338_100324244 | 437 |
| 196 | 3300031235 | Ga0265330_10000087 | Ga0265330_1000008741 | 437 |
| 197 | 3300031235 | Ga0265330_10000262 | Ga0265330_100002626 | 437 |
| 198 | 3300031238 | Ga0265332_10010448 | Ga0265332_100104482 | 437 |
| 199 | 3300031239 | Ga0265328_10000958 | Ga0265328_100009589 | 437 |
| 200 | 3300031240 | Ga0265320_10005314 | Ga0265320_100053142 | 437 |
| 201 | 3300031241 | Ga0265325_10000064 | Ga0265325_1000006453 | 437 |
| 202 | 3300031241 | Ga0265325_10000211 | Ga0265325_1000021135 | 437 |
| 203 | 3300031247 | Ga0265340_10000225 | Ga0265340_1000022519 | 437 |
| 204 | 3300031249 | Ga0265339_10000268 | Ga0265339_1000026829 | 437 |
| 205 | 3300031249 | Ga0265339_10009425 | Ga0265339_100094253 | 437 |
| 206 | 3300031249 | Ga0265339_10012259 | Ga0265339_100122594 | 437 |
| 207 | 3300031249 | Ga0265339_10030117 | Ga0265339_100301173 | 437 |
| 208 | 3300031344 | Ga0265316_10000355 | Ga0265316_1000035536 | 437 |
| 209 | 3300031344 | Ga0265316_10001405 | Ga0265316_1000140514 | 437 |
| 210 | 3300031595 | Ga0265313_10000834 | Ga0265313_100008343 | 437 |
| 211 | 3300031595 | Ga0265313_10003790 | Ga0265313_100037902 | 437 |
| 212 | 3300031711 | Ga0265314_10000067 | Ga0265314_1000006779 | 437 |
| 213 | 3300031711 | Ga0265314_10001292 | Ga0265314_1000129210 | 437 |
| 214 | 3300031712 | Ga0265342_10000067 | Ga0265342_1000006730 | 437 |
| 215 | 3300031712 | Ga0265342_10002750 | Ga0265342_1000275010 | 437 |
| 216 | 3300031241 | Ga0265325_10049046 | Ga0265325_100490461 | 438 |
| 217 | 3300048917 | Ga0496114_0140469 | Ga0496114_0140469_106_1620 | 438 |
| 218 | 3300031344 | Ga0265316_10048400 | Ga0265316_100484002 | 439 |
| 219 | 3300031711 | Ga0265314_10053229 | Ga0265314_100532292 | 440 |
| 220 | 3300003320 | rootH2_10202240 | rootH2_102022403 | 441 |
| 221 | 3300031247 | Ga0265340_10024153 | Ga0265340_100241532 | 441 |
| 222 | 3300031344 | Ga0265316_10007823 | Ga0265316_100078236 | 441 |
| 223 | 3300031344 | Ga0265316_10105659 | Ga0265316_101056592 | 441 |
| 224 | 3300031712 | Ga0265342_10039143 | Ga0265342_100391433 | 441 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3r2d-assembly1.cif.gz_A | crystal structure of antitermination factors nusb and nuse in complex with dsrna | 0.8796 | 6 | 130 |
| 1tzx-assembly2.cif.gz_B | t. maritima nusb, p3221 | 0.8677 | 7 | 129 |
| 3imq-assembly1.cif.gz_A | crystal structure of the nusb101-s10(delta loop) complex | 0.8604 | 7 | 135 |
| 3d3c-assembly3.cif.gz_C | structural and functional analysis of the e. coli nusb-s10 transcription antitermination complex. | 0.8561 | 7 | 135 |
| 2frx-assembly2.cif.gz_B | crystal structure of yebu, a m5c rna methyltransferase from e.coli | 0.8437 | 151 | 441 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P9WGX3_13_148_1.10.940.10 | Mainly Alpha;Orthogonal Bundle;N-utilizing Substance Protein B Homolog; Chain A;NusB-like | 0.9188 | 4 | 134 | 1.10.940.10 |
| 3r2cB00 | Mainly Alpha;Orthogonal Bundle;N-utilizing Substance Protein B Homolog; Chain A;NusB-like | 0.8923 | 7 | 133 | 1.10.940.10 |
| af_Q8I5B4_83_186_3.30.70.1170 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Sun protein; domain 3 | 0.8853 | 145 | 233 | 3.30.70.1170 |
| af_P9WGX3_13_148_1.10.940.10 | Mainly Alpha;Orthogonal Bundle;N-utilizing Substance Protein B Homolog; Chain A;NusB-like | 0.8803 | 4 | 134 | 1.10.940.10 |
| af_Q2FZ67_2_133_1.10.940.10 | Mainly Alpha;Orthogonal Bundle;N-utilizing Substance Protein B Homolog; Chain A;NusB-like | 0.8707 | 7 | 140 | 1.10.940.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7Y2ZDQ8-F1-model_v4 | Transcription antitermination protein NusB | 0.9363 | 34 | 130 |
GO:0003723
GO:0006355 |
| AF-A0A0A9IPV7-F1-model_v4 | deleted | 0.9276 | 274 | 408 |
|
| AF-A0A287N686-F1-model_v4 | deleted | 0.9179 | 314 | 408 |
|
| AF-A0A1D6I6D0-F1-model_v4 | S-adenosyl-L-methionine-dependent methyltransferase superfamily protein | 0.916 | 222 | 407 |
GO:0000049
GO:0005634 GO:0016428 GO:0030488 |
| AF-A0A1D6I6D2-F1-model_v4 | S-adenosyl-L-methionine-dependent methyltransferase superfamily protein | 0.9159 | 222 | 407 |
GO:0000049
GO:0005634 GO:0016428 GO:0030488 |
Predicted Structure (AlphaFold2)
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